pycom12419g00100

Chaperone protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00012419
Physical Location & Seq
Forward (+)
132801 .. 140301
7501 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12419g00100.6

Sequence Viewer

Length: 1506 bp
ATGGCTGCCGCAGCTCTCTCCCTCCTCCCCTCCTCCTCCTCCTCTCCCCACCTCCTCTTCCCGCCCTCTTCTTCTTCTTCTTCGTCCTCCTCCGCTTCCTCTTCTTCTTTGTTTGTATCGGGTGGGACCCATTTGAGGACCCACGTCTGTCTTAGTTCTTCGCCATCGTCATCTTCTTCGTCCACTTCTTCTCGATGGAAATTCAGCACGAAACGCAGCGTTGGGAGAGTATATGCTGCTTCTGGCGATTACTATGCCACTCTTGGGGTTCCCAAATCTGCCACCAGCAAGGAAATCAAAGTCGCTTATAGACGTTTGGCTCGCCAGTACCACCCTGATGTCAACAAGCAACCAGGAGCAACCGAAAAGTTTAAAGAAATCAGTGCTGCATATGAGGTGCTATCAGATGATAAGAAGCGAACTTTATATGATCAATATGGTGAAGCTGGAGTTAAGAGCGCTGTAGGTGGAGGTTCAAGTGCCTATACGACAAATCCTTTTGATTTATTTGAGACTTTTTTTGGGTCGAGTATGGGTGGATTCTCTGATATGGATTCTGCATTTGGAACACGCCGTCGTAGCACTGTTACAAAGGGTGAAGACATCCGTTATGACATCACTTTAGAATTTTCTGAGGCTATATTTGGAGTGGAAAAAGAATTTGAACTTTCCCATCTGGAAACTTGTGAAATTTGCACTGGAACTGGTGGTAAAATAGGCTCTAAAATGCGGATTTGTTCTACTTGTGGTGGGAGGGGTCAGGTTATGAGAACAGAGCAGACACCTTTTGGCCTGTTTTCCCAGGTTTCCATATGTCCAAATTGTAGTGGAGATGGTGAAGTCATTTCTGAATACTGTCGGAAGTGCTCTGGTGAAGGACGTGTCCGTGCTAAGAAAAGTATTAAAGTTAAAGTTCCTCCAGGTGTTAGCACAGGAAGCATTCTGAGAGTTGCTGGAGAGGGAGATGCCGGGCCGAAAGGGGGCCCTCCGGGGGATCTATATGTATATCTTGATGTTGAAGAACTAGAAGGAATTCAAAGAGACGGGATAAATCTCTCCTCAACTGTTTCTATCAGCTATCTGGATGCCATATTGGGGGCTGTTGTTAAGGTAAATACAGTTGAAGGAATTACCACACTACAAATCCCACCAGGTACCCAACCTGGGGATATTCTTGTCTTAGCAAAAAAAGGAGTACCAAAGTTGAACAAATCATCAATACGTGGCGACCACATATTTACAATTAAAGTAACAATACCAAATCGTATCAGTTCCAACGAGCGTGAATTGCTGGAAAAGCTTGCTTCACTGAGTTATACTACCACCAGACGTTCACGCACTCGCCCTAAATTGCAGCCAGCTACAACTAGTATGGAAACTGAGGTGGGAACGGTTGGGGAGAAAACAGAGGAAGGAGATGATCAAGATGACCCATGGAAGAAGTTAAAAGACTTTGCAGGGTCTGTTGCAAATGGTGCCCTAAAATGGCTGAGAGACAACCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

502

Amino Acids

53.62

Weight (kDa)

8.77

Isoelectric Point (pI)

47.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1154
AccB1I GGYRCC 2 cut(s) 1154, 1475
AciI CCGC 4 cut(s) 9, 62, 93, 730
AclWI GGATC 1 cut(s) 1002
AcsI RAATTY 5 cut(s) 200, 626, 659, 690, 1032
AfaI GTAC 3 cut(s) 329, 1156, 1197
AfeI AGCGCT 1 cut(s) 460
AfiI CCNNNNNNNGG 8 cut(s) 135, 264, 980, 991, 1095, 1164, 1165, 1485
AflIII ACRYGT 1 cut(s) 880
AgsI TTSAA 6 cut(s) 477, 665, 1019, 1037, 1124, 1207
AhlI ACTAGT 1 cut(s) 1367
AjiI CACGTC 2 cut(s) 145, 881
AjnI CCWGG 5 cut(s) 352, 801, 919, 1150, 1162
AluBI AGCT 5 cut(s) 14, 446, 1077, 1300, 1361
AluI AGCT 5 cut(s) 14, 446, 1077, 1300, 1361
Alw21I GWGCWC 1 cut(s) 869
Alw26I GTCTC 3 cut(s) 506, 1035, 1488
AlwI GGATC 1 cut(s) 1002
AlwNI CAGNNNCTG 1 cut(s) 1463
Aor51HI AGCGCT 1 cut(s) 460
AoxI GGCC 3 cut(s) 790, 971, 982
ApaI GGGCCC 1 cut(s) 986
ApeKI GCWGC 6 cut(s) 5, 11, 216, 236, 386, 1354
ApoI RAATTY 5 cut(s) 200, 626, 659, 690, 1032
Asp700I GAANNNNTTC 1 cut(s) 1032
Asp718I GGTACC 1 cut(s) 1154
AspLEI GCGC 1 cut(s) 461
AspS9I GGNCC 5 cut(s) 126, 138, 971, 982, 983
AsuC2I CCSGG 2 cut(s) 970, 990
AsuHPI GGTGA 4 cut(s) 452, 608, 848, 884
AvaII GGWCC 2 cut(s) 126, 138
BaeGI GKGCMC 2 cut(s) 986, 1480
BanI GGYRCC 2 cut(s) 1154, 1475
BanII GRGCYC 1 cut(s) 986
BbsI GAAGAC 1 cut(s) 606
Bbv12I GWGCWC 1 cut(s) 869
BbvI GCAGC 5 cut(s) 23, 223, 228, 373, 1366
BccI CCATC 4 cut(s) 172, 189, 681, 827
BceAI ACGGC 1 cut(s) 558
BcgI CGANNNNNNTGC 2 cut(s) 236, 270
BciT130I CCWGG 5 cut(s) 354, 803, 921, 1152, 1164
BclI TGATCA 2 cut(s) 430, 1420
BcnI CCSGG 2 cut(s) 970, 990
BcoDI GTCTC 3 cut(s) 506, 1035, 1488
BcuI ACTAGT 1 cut(s) 1367
BfaI CTAG 3 cut(s) 1025, 1368, 1504
BfmI CTRYAG 1 cut(s) 462
BfoI RGCGCY 1 cut(s) 462
BisI GCNGC 7 cut(s) 6, 9, 12, 217, 237, 387, 1355
BlsI GCNGC 7 cut(s) 7, 10, 13, 218, 238, 388, 1356
Bme1390I CCNGG 7 cut(s) 354, 803, 921, 970, 990, 1152, 1164
Bme18I GGWCC 2 cut(s) 126, 138
BmgBI CACGTC 2 cut(s) 145, 881
BmgT120I GGNCC 5 cut(s) 126, 138, 971, 982, 983
BmiI GGNNCC 8 cut(s) 127, 128, 140, 270, 983, 984, 1156, 1477
BmrFI CCNGG 7 cut(s) 354, 803, 921, 970, 990, 1152, 1164
BmsI GCATC 2 cut(s) 955, 1075
BoxI GACNNNNGTC 1 cut(s) 143
BpiI GAAGAC 1 cut(s) 606
BplI GAGNNNNNCTC 1 cut(s) 1485
BpmI CTGGAG 3 cut(s) 468, 903, 975
BpuMI CCSGG 2 cut(s) 970, 990
BsaAI YACGTR 1 cut(s) 1223
BsaJI CCNNGG 4 cut(s) 801, 989, 1163, 1433
Bsc4I CCNNNNNNNGG 8 cut(s) 135, 264, 980, 991, 1095, 1164, 1165, 1485
Bse1I ACTGG 3 cut(s) 325, 703, 709
BseBI CCWGG 5 cut(s) 354, 803, 921, 1152, 1164
BseDI CCNNGG 4 cut(s) 801, 989, 1163, 1433
BseGI GGATG 2 cut(s) 603, 1090
BseLI CCNNNNNNNGG 8 cut(s) 135, 264, 980, 991, 1095, 1164, 1165, 1485
BseMII CTCAG 5 cut(s) 624, 935, 1301, 1371, 1481
BseNI ACTGG 3 cut(s) 325, 703, 709
BseRI GAGGAG 8 cut(s) 14, 22, 25, 28, 31, 44, 79, 1048
BseSI GKGCMC 2 cut(s) 986, 1480
BseXI GCAGC 5 cut(s) 23, 223, 228, 373, 1366
BshFI GGCC 3 cut(s) 792, 973, 984
BshNI GGYRCC 2 cut(s) 1154, 1475
BsiHKAI GWGCWC 1 cut(s) 869
BsiSI CCGG 2 cut(s) 969, 989
BslFI GGGAC 1 cut(s) 139
BslI CCNNNNNNNGG 8 cut(s) 135, 264, 980, 991, 1095, 1164, 1165, 1485
BsmAI GTCTC 3 cut(s) 506, 1035, 1488
BsmBI CGTCTC 1 cut(s) 1035
BsmFI GGGAC 1 cut(s) 139
BsmI GAATGC 1 cut(s) 939
BsnI GGCC 3 cut(s) 792, 973, 984
Bsp120I GGGCCC 1 cut(s) 982
Bsp1286I GDGCHC 3 cut(s) 869, 986, 1480
Bsp143I GATC 3 cut(s) 430, 994, 1420
Bsp19I CCATGG 1 cut(s) 1433
BspACI CCGC 4 cut(s) 9, 62, 93, 730
BspANI GGCC 3 cut(s) 792, 973, 984
BspCNI CTCAG 5 cut(s) 625, 936, 1302, 1372, 1482
BspLI GGNNCC 8 cut(s) 127, 128, 140, 270, 983, 984, 1156, 1477
BspPI GGATC 1 cut(s) 1002
BspT107I GGYRCC 2 cut(s) 1154, 1475
BsrI ACTGG 3 cut(s) 325, 703, 709
BssECI CCNNGG 4 cut(s) 801, 989, 1163, 1433
BssMI GATC 3 cut(s) 430, 994, 1420
BssT1I CCWWGG 1 cut(s) 1433
Bst2UI CCWGG 5 cut(s) 354, 803, 921, 1152, 1164
Bst4CI ACNGT 5 cut(s) 586, 857, 1066, 1120, 1393
Bst6I CTCTTC 3 cut(s) 62, 73, 106
BstAPI GCANNNNNTGC 1 cut(s) 1475
BstBAI YACGTR 1 cut(s) 1223
BstC8I GCNNGC 3 cut(s) 322, 1302, 1359
BstDEI CTNAG 8 cut(s) 152, 633, 891, 944, 1180, 1310, 1380, 1490
BstDSI CCRYGG 1 cut(s) 1433
BstF5I GGATG 2 cut(s) 603, 1090
BstH2I RGCGCY 1 cut(s) 462
BstHHI GCGC 1 cut(s) 461
BstKTI GATC 3 cut(s) 433, 997, 1423
BstMAI GTCTC 3 cut(s) 506, 1035, 1488
BstMBI GATC 3 cut(s) 430, 994, 1420
BstMWI GCNNNNNNNGC 7 cut(s) 11, 213, 579, 936, 1288, 1297, 1475
BstNI CCWGG 5 cut(s) 354, 803, 921, 1152, 1164
BstPAI GACNNNNGTC 1 cut(s) 143
BstSCI CCNGG 7 cut(s) 352, 801, 919, 968, 988, 1150, 1162
BstSFI CTRYAG 1 cut(s) 462
BstSLI GKGCMC 2 cut(s) 986, 1480
BstV1I GCAGC 5 cut(s) 23, 223, 228, 373, 1366
BstV2I GAAGAC 1 cut(s) 606
BstX2I RGATCY 1 cut(s) 994
BstYI RGATCY 1 cut(s) 994
BsuRI GGCC 3 cut(s) 792, 973, 984
BtgI CCRYGG 1 cut(s) 1433
BtrI CACGTC 2 cut(s) 145, 881
BtsCI GGATG 2 cut(s) 603, 1090
BtsIMutI CAGTG 4 cut(s) 388, 582, 696, 1307
Cac8I GCNNGC 3 cut(s) 322, 1302, 1359
CaiI CAGNNNCTG 1 cut(s) 1463
CfoI GCGC 1 cut(s) 461
Cfr13I GGNCC 5 cut(s) 126, 138, 971, 982, 983
CsiI ACCWGGT 1 cut(s) 1150
Csp6I GTAC 3 cut(s) 328, 1155, 1196
CviAII CATG 1 cut(s) 1434
CviQI GTAC 3 cut(s) 328, 1155, 1196
DdeI CTNAG 8 cut(s) 152, 633, 891, 944, 1180, 1310, 1380, 1490
DpnI GATC 3 cut(s) 432, 996, 1422
DpnII GATC 3 cut(s) 430, 994, 1420
DraI TTTAAA 1 cut(s) 373
Eam1104I CTCTTC 3 cut(s) 62, 73, 106
EarI CTCTTC 3 cut(s) 62, 73, 106
Eco130I CCWWGG 1 cut(s) 1433
Eco24I GRGCYC 1 cut(s) 986
Eco47I GGWCC 2 cut(s) 126, 138
Eco47III AGCGCT 1 cut(s) 460
EcoO109I RGGNCCY 4 cut(s) 126, 138, 982, 983
EcoRI GAATTC 1 cut(s) 1032
EcoRII CCWGG 5 cut(s) 352, 801, 919, 1150, 1162
EcoT14I CCWWGG 1 cut(s) 1433
EcoT38I GRGCYC 1 cut(s) 986
ErhI CCWWGG 1 cut(s) 1433
Esp3I CGTCTC 1 cut(s) 1035
FaeI CATG 1 cut(s) 1437
FaqI GGGAC 1 cut(s) 139
FatI CATG 1 cut(s) 1433
FauI CCCGC 1 cut(s) 69
FauNDI CATATG 2 cut(s) 391, 812
FbaI TGATCA 2 cut(s) 430, 1420
Fnu4HI GCNGC 7 cut(s) 6, 9, 12, 217, 237, 387, 1355
FokI GGATG 2 cut(s) 590, 1097
FriOI GRGCYC 1 cut(s) 986
Fsp4HI GCNGC 7 cut(s) 6, 9, 12, 217, 237, 387, 1355
FspBI CTAG 3 cut(s) 1025, 1368, 1504
GlaI GCGC 1 cut(s) 460
GluI GCNGC 7 cut(s) 6, 9, 12, 217, 237, 387, 1355
GsuI CTGGAG 3 cut(s) 468, 903, 975
HaeII RGCGCY 1 cut(s) 462
HaeIII GGCC 3 cut(s) 792, 973, 984
HapII CCGG 2 cut(s) 969, 989
HhaI GCGC 1 cut(s) 461
Hin1II CATG 1 cut(s) 1437
Hin6I GCGC 1 cut(s) 459
HinP1I GCGC 1 cut(s) 459
HincII GTYRAC 1 cut(s) 343
HindII GTYRAC 1 cut(s) 343
HindIII AAGCTT 1 cut(s) 1298
HinfI GANTC 2 cut(s) 540, 554
HpaII CCGG 2 cut(s) 969, 989
HphI GGTGA 4 cut(s) 452, 608, 848, 884
Hpy166II GTNNAC 3 cut(s) 183, 343, 1334
Hpy188I TCNGA 6 cut(s) 406, 547, 634, 850, 861, 945
Hpy188III TCNNGA 5 cut(s) 192, 677, 1010, 1082, 1424
Hpy8I GTNNAC 3 cut(s) 183, 343, 1334
Hpy99I CGWCG 1 cut(s) 579
HpyAV CCTTC 4 cut(s) 869, 1022, 1118, 1406
HpyCH4III ACNGT 5 cut(s) 586, 857, 1066, 1120, 1393
HpyCH4IV ACGT 5 cut(s) 144, 313, 880, 1222, 1330
HpyCH4V TGCA 6 cut(s) 389, 560, 696, 1354, 1457, 1469
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 213, 579, 936, 1288, 1297, 1475
HpyF3I CTNAG 8 cut(s) 152, 633, 891, 944, 1180, 1310, 1380, 1490
HpySE526I ACGT 5 cut(s) 144, 313, 880, 1222, 1330
Hsp92II CATG 1 cut(s) 1437
HspAI GCGC 1 cut(s) 459
KflI GGGWCCC 1 cut(s) 126
KpnI GGTACC 1 cut(s) 1158
Ksp22I TGATCA 2 cut(s) 430, 1420
Kzo9I GATC 3 cut(s) 430, 994, 1420
LmnI GCTCC 1 cut(s) 356
Lsp1109I GCAGC 5 cut(s) 23, 223, 228, 373, 1366
LweI GCATC 2 cut(s) 955, 1075
MabI ACCWGGT 1 cut(s) 1150
MaeI CTAG 3 cut(s) 1025, 1368, 1504
MaeII ACGT 5 cut(s) 144, 313, 880, 1222, 1330
MaeIII GTNAC 2 cut(s) 586, 1249
MalI GATC 3 cut(s) 432, 996, 1422
MboI GATC 3 cut(s) 430, 994, 1420
MflI RGATCY 1 cut(s) 994
MhlI GDGCHC 3 cut(s) 869, 986, 1480
MmeI TCCRAC 2 cut(s) 839, 1299
MroXI GAANNNNTTC 1 cut(s) 1032
MseI TTAA 7 cut(s) 372, 453, 903, 909, 1107, 1245, 1445
MslI CAYNNNNRTG 1 cut(s) 336
MspI CCGG 2 cut(s) 969, 989
MspR9I CCNGG 7 cut(s) 354, 803, 921, 970, 990, 1152, 1164
Mva1269I GAATGC 1 cut(s) 939
MvaI CCWGG 5 cut(s) 354, 803, 921, 1152, 1164
MwoI GCNNNNNNNGC 7 cut(s) 11, 213, 579, 936, 1288, 1297, 1475
NciI CCSGG 2 cut(s) 970, 990
NcoI CCATGG 1 cut(s) 1433
NdeI CATATG 2 cut(s) 391, 812
NdeII GATC 3 cut(s) 430, 994, 1420
NlaIII CATG 1 cut(s) 1437
NlaIV GGNNCC 8 cut(s) 127, 128, 140, 270, 983, 984, 1156, 1477
PctI GAATGC 1 cut(s) 939
PdmI GAANNNNTTC 1 cut(s) 1032
PfeI GAWTC 2 cut(s) 540, 554
PkrI GCNGC 7 cut(s) 7, 10, 13, 218, 238, 388, 1356
Ppu21I YACGTR 1 cut(s) 1223
PpuMI RGGWCCY 2 cut(s) 126, 138
PshAI GACNNNNGTC 1 cut(s) 143
Psp5II RGGWCCY 2 cut(s) 126, 138
Psp6I CCWGG 5 cut(s) 352, 801, 919, 1150, 1162
PspGI CCWGG 5 cut(s) 352, 801, 919, 1150, 1162
PspN4I GGNNCC 8 cut(s) 127, 128, 140, 270, 983, 984, 1156, 1477
PspOMI GGGCCC 1 cut(s) 982
PspPI GGNCC 5 cut(s) 126, 138, 971, 982, 983
PspPPI RGGWCCY 2 cut(s) 126, 138
PstNI CAGNNNCTG 1 cut(s) 1463
PsuI RGATCY 1 cut(s) 994
RsaI GTAC 3 cut(s) 329, 1156, 1197
RsaNI GTAC 3 cut(s) 328, 1155, 1196
RseI CAYNNNNRTG 1 cut(s) 336
SaqAI TTAA 7 cut(s) 372, 453, 903, 909, 1107, 1245, 1445
SatI GCNGC 7 cut(s) 6, 9, 12, 217, 237, 387, 1355
Sau3AI GATC 3 cut(s) 430, 994, 1420
Sau96I GGNCC 5 cut(s) 126, 138, 971, 982, 983
ScrFI CCNGG 7 cut(s) 354, 803, 921, 970, 990, 1152, 1164
SduI GDGCHC 3 cut(s) 869, 986, 1480
SexAI ACCWGGT 1 cut(s) 1150
SfaNI GCATC 2 cut(s) 955, 1075
SfcI CTRYAG 1 cut(s) 462
SinI GGWCC 2 cut(s) 126, 138
SmiMI CAYNNNNRTG 1 cut(s) 336
SpeI ACTAGT 1 cut(s) 1367
SsiI CCGC 4 cut(s) 9, 62, 93, 730
SspMI CTAG 3 cut(s) 1025, 1368, 1504
StyD4I CCNGG 7 cut(s) 352, 801, 919, 968, 988, 1150, 1162
StyI CCWWGG 1 cut(s) 1433
TaaI ACNGT 5 cut(s) 586, 857, 1066, 1120, 1393
TaiI ACGT 5 cut(s) 147, 316, 883, 1225, 1333
TaqI TCGA 2 cut(s) 193, 527
TauI GCSGC 1 cut(s) 11
TfiI GAWTC 2 cut(s) 540, 554
Tru1I TTAA 7 cut(s) 372, 453, 903, 909, 1107, 1245, 1445
Tru9I TTAA 7 cut(s) 372, 453, 903, 909, 1107, 1245, 1445
TscAI CASTG 4 cut(s) 388, 589, 703, 1314
TseI GCWGC 6 cut(s) 5, 11, 216, 236, 386, 1354
TspGWI ACGGA 2 cut(s) 596, 875
TspRI CASTG 4 cut(s) 388, 589, 703, 1314
VpaK11BI GGWCC 2 cut(s) 126, 138
XapI RAATTY 5 cut(s) 200, 626, 659, 690, 1032
XmnI GAANNNNTTC 1 cut(s) 1032
XspI CTAG 3 cut(s) 1025, 1368, 1504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.