pycom13g11700

Calnexin homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
8063318 .. 8065537
2220 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g11700.5

Sequence Viewer

Length: 1566 bp
ATGGCAGGAACACGGTGGCGTCGAATCACTGACCTCCTTCTTCTGCTGCTGATTGGCTGCTCTGCTTCTCAGATCCACGCTTCTTCAGAATACGAAGTCGATTCGATCTTTTACGAGCCATTTTCTGAGTCGTTTGAAGGCCGATGGATTGTTTCTTCGAAAGATGAGTACCAAGGGGTATGGAAACTGTCCAAGAGTGAGGGACATGATGATTACGGGCTTCTGATGAGTGAGAAGGCGAGGAAGTATGCAGTGGTGAAAGAGATGGACAAGGCTGTGAGCCTTGCTGATGGAACCGTTGTCCTACAGTTTGAGGTCCGGCTCCAGAACGGGCTTGAATGTGGCGGTGCTTACTTGAAGTACCTCCGGCCACAGGAGGCTGGATGGAAAGCGGAGGAATTTGACAATGAGTCGCCGTATTCTATTATGTTTGGACCGGACAAATGTGGTTCCACAAACAAGGTTCATTTCATTTTTAAGCACAAGAACCCCAAGAGTGGAGAGTATGTTGAGCACCATCTCAAGGACCCTCCATCCGTGCCCTCCGATAAGCTGTCTCATGTTTACACTGCCGTACTGAAACCTGATAACGAAGTTAGGATTTTGATAGATGGGGAGGAGAAGAAGAAGGCGAATTTCCTGTCAAATAAAGATTTTGAGCCTGCATTGATTCCAGCCAAGACAATTCCTGACCCAGAGGATAAGAAGCCAGAGGATTGGGATGAGCGGGCGAAGATTCCGGACCCCAATGCCGTTAAGCCTGATGATTGGGACGAGGATGCACCAATGGAAATTGAGGACGAGGATGCTGTGAAACCTGAAGGGTGGTTGGATGATGAGCCTGAAGAGATTGATGACCCTGAGGCGACAAGGCCAGAAGATTGGGACGACGAAGAGGATGGTATATGGGAACCAACAAAGACGGATAACCCCAAGTGTTCTTTGGCACCTGGTTGTGGAGAATGGAAGAAGCCAATGAAACATAATCCTGCTTATAAAGGAAAATGGAGCCCTCCTATGATTGACAACCCCAGTTACAAGGGCATCTGGAAGCCTCGGGAAATTCCAAACCCTGATTACTTCGAGACCGAGAAGCCCAACTTTGAGCCCATTGCTGCTATTGGCATTGAGATATGGACAATGCAGGACGGAATATTGTTTGACAATATTCTCATAGCTGATAATGAGAAGGTTGCTGAATCTGTTAGGCTAACAACGTGGAAGCCGAAGTTTGAAACTGAGAAAGAGAAACAGAAGGCTGAGGAAGAAGCTGCAGGTCTTTCTGATGGACTCTCAAGCTACCAGGAATTGATTGAGAAGGGAGAAAAACAGCCCAATATTACAATTGGTGTTATCGTTTCCGTCGTGGTTGTTCTCTTGTCAATTTTCTTTAAAATCCTGTTTGGTAGCAAGAAACCGGCGGTCACTGTTCCAGAACCAAACAGGGCTGCGGCTGCAGAGACATCCCATGATGAAGGAAGCAGCGGCGAGAAGGAAGATGAGATTGAGAAAGAAGAAGCTGAAGCTCCTCCCCCCCGCAGGCGGTCTACCAGAGGGGAAACATGA

Protein Analysis

522

Amino Acids

58.91

Weight (kDa)

4.69

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 996
Acc36I ACCTGC 1 cut(s) 1265
AccB1I GGYRCC 1 cut(s) 946
AccBSI CCGCTC 1 cut(s) 727
AccI GTMKAC 1 cut(s) 1547
AccIII TCCGGA 1 cut(s) 739
AciI CCGC 8 cut(s) 345, 392, 727, 1421, 1451, 1485, 1537, 1543
AclWI GGATC 1 cut(s) 67
AcoI YGGCCR 1 cut(s) 368
AcsI RAATTY 3 cut(s) 398, 634, 1062
AcuI CTGAAG 4 cut(s) 69, 840, 864, 1542
AcyI GRCGYC 1 cut(s) 19
AfaI GTAC 3 cut(s) 170, 362, 576
AfiI CCNNNNNNNGG 6 cut(s) 373, 497, 523, 956, 1539, 1542
AgsI TTSAA 4 cut(s) 137, 338, 358, 1235
AhdI GACNNNNNGTC 1 cut(s) 409
AjnI CCWGG 2 cut(s) 949, 1302
AluBI AGCT 6 cut(s) 553, 1178, 1271, 1299, 1520, 1526
AluI AGCT 6 cut(s) 553, 1178, 1271, 1299, 1520, 1526
Alw21I GWGCWC 1 cut(s) 516
Alw26I GTCTC 3 cut(s) 561, 1079, 1454
AlwI GGATC 1 cut(s) 67
Ama87I CYCGRG 1 cut(s) 1056
Aor13HI TCCGGA 1 cut(s) 739
AoxI GGCC 3 cut(s) 139, 368, 872
ApeKI GCWGC 7 cut(s) 46, 57, 1115, 1271, 1448, 1454, 1482
ApoI RAATTY 3 cut(s) 398, 634, 1062
ArsI GACNNNNNNTTYG 2 cut(s) 626, 658
AspS9I GGNCC 4 cut(s) 316, 434, 526, 742
AsuHPI GGTGA 1 cut(s) 268
AsuII TTCGAA 1 cut(s) 158
AvaI CYCGRG 1 cut(s) 1056
AvaII GGWCC 4 cut(s) 316, 434, 526, 742
AxyI CCTNAGG 1 cut(s) 861
BaeGI GKGCMC 1 cut(s) 543
BanI GGYRCC 1 cut(s) 946
BanII GRGCYC 2 cut(s) 1013, 1110
Bbv12I GWGCWC 1 cut(s) 516
BbvCI CCTCAGC 1 cut(s) 1260
BbvI GCAGC 7 cut(s) 33, 44, 1102, 1258, 1435, 1441, 1494
BccI CCATC 9 cut(s) 138, 259, 284, 378, 525, 541, 605, 893, 1280
BceAI ACGGC 3 cut(s) 400, 557, 737
BciT130I CCWGG 2 cut(s) 951, 1304
BcoDI GTCTC 3 cut(s) 561, 1079, 1454
BfmI CTRYAG 3 cut(s) 305, 1272, 1455
BfuAI ACCTGC 1 cut(s) 1265
BisI GCNGC 9 cut(s) 47, 58, 1116, 1272, 1449, 1452, 1455, 1483, 1486
BlsI GCNGC 9 cut(s) 48, 59, 1117, 1273, 1450, 1453, 1456, 1484, 1487
Bme1390I CCNGG 2 cut(s) 951, 1304
Bme18I GGWCC 4 cut(s) 316, 434, 526, 742
BmeRI GACNNNNNGTC 1 cut(s) 409
BmeT110I CYCGRG 1 cut(s) 1056
BmgT120I GGNCC 4 cut(s) 316, 434, 526, 742
BmiI GGNNCC 8 cut(s) 295, 323, 451, 528, 744, 912, 948, 1010
BmrFI CCNGG 2 cut(s) 951, 1304
BmrI ACTGGG 1 cut(s) 1026
BmsI GCATC 3 cut(s) 769, 796, 1053
BmuI ACTGGG 1 cut(s) 1026
BpmI CTGGAG 1 cut(s) 308
Bpu10I CCTNAGC 1 cut(s) 1260
Bpu14I TTCGAA 1 cut(s) 158
BpuEI CTTGAG 2 cut(s) 506, 1279
BsaHI GRCGYC 1 cut(s) 19
BsaI GGTCTC 1 cut(s) 1079
BsaJI CCNNGG 2 cut(s) 172, 1055
BsaWI WCCGGW 2 cut(s) 436, 739
BsaXI ACNNNNNCTCC 2 cut(s) 492, 522
Bsc4I CCNNNNNNNGG 6 cut(s) 373, 497, 523, 956, 1539, 1542
Bse118I RCCGGY 1 cut(s) 1417
Bse1I ACTGG 1 cut(s) 1032
Bse21I CCTNAGG 1 cut(s) 861
Bse3DI GCAATG 1 cut(s) 1110
BseAI TCCGGA 1 cut(s) 739
BseBI CCWGG 2 cut(s) 951, 1304
BseDI CCNNGG 2 cut(s) 172, 1055
BseGI GGATG 8 cut(s) 389, 533, 727, 784, 811, 838, 904, 1463
BseLI CCNNNNNNNGG 6 cut(s) 373, 497, 523, 956, 1539, 1542
BseMI GCAATG 1 cut(s) 1110
BseMII CTCAG 5 cut(s) 83, 117, 852, 1230, 1251
BseNI ACTGG 1 cut(s) 1032
BseRI GAGGAG 2 cut(s) 632, 1518
BseSI GKGCMC 1 cut(s) 543
BseXI GCAGC 7 cut(s) 33, 44, 1102, 1258, 1435, 1441, 1494
BshFI GGCC 3 cut(s) 141, 370, 874
BshNI GGYRCC 1 cut(s) 946
BsiHKAI GWGCWC 1 cut(s) 516
BsiHKCI CYCGRG 1 cut(s) 1056
BsiSI CCGG 5 cut(s) 319, 367, 437, 740, 1418
BslFI GGGAC 3 cut(s) 216, 785, 899
BslI CCNNNNNNNGG 6 cut(s) 373, 497, 523, 956, 1539, 1542
BsmAI GTCTC 3 cut(s) 561, 1079, 1454
BsmFI GGGAC 3 cut(s) 216, 785, 899
BsnI GGCC 3 cut(s) 141, 370, 874
Bso31I GGTCTC 1 cut(s) 1079
BsoBI CYCGRG 1 cut(s) 1056
Bsp119I TTCGAA 1 cut(s) 158
Bsp1286I GDGCHC 4 cut(s) 516, 543, 1013, 1110
Bsp13I TCCGGA 1 cut(s) 739
Bsp143I GATC 2 cut(s) 72, 105
BspACI CCGC 8 cut(s) 345, 392, 727, 1421, 1451, 1485, 1537, 1543
BspANI GGCC 3 cut(s) 141, 370, 874
BspCNI CTCAG 5 cut(s) 82, 118, 853, 1231, 1252
BspEI TCCGGA 1 cut(s) 739
BspLI GGNNCC 8 cut(s) 295, 323, 451, 528, 744, 912, 948, 1010
BspMAI CTGCAG 2 cut(s) 1276, 1459
BspMI ACCTGC 1 cut(s) 1265
BspPI GGATC 1 cut(s) 67
BspT104I TTCGAA 1 cut(s) 158
BspT107I GGYRCC 1 cut(s) 946
BspTNI GGTCTC 1 cut(s) 1079
BsrBI CCGCTC 1 cut(s) 727
BsrDI GCAATG 1 cut(s) 1110
BsrFI RCCGGY 1 cut(s) 1417
BsrI ACTGG 1 cut(s) 1032
BssAI RCCGGY 1 cut(s) 1417
BssECI CCNNGG 2 cut(s) 172, 1055
BssMI GATC 2 cut(s) 72, 105
BssNI GRCGYC 1 cut(s) 19
BssT1I CCWWGG 1 cut(s) 172
Bst2UI CCWGG 2 cut(s) 951, 1304
Bst4CI ACNGT 5 cut(s) 15, 189, 298, 309, 1429
Bst6I CTCTTC 2 cut(s) 840, 888
BstACI GRCGYC 1 cut(s) 19
BstBI TTCGAA 1 cut(s) 158
BstC8I GCNNGC 3 cut(s) 663, 729, 1541
BstDEI CTNAG 5 cut(s) 69, 126, 861, 1239, 1260
BstF5I GGATG 8 cut(s) 389, 533, 727, 784, 811, 838, 904, 1463
BstKTI GATC 2 cut(s) 75, 108
BstMAI GTCTC 3 cut(s) 561, 1079, 1454
BstMBI GATC 2 cut(s) 72, 105
BstMWI GCNNNNNNNGC 1 cut(s) 1454
BstNI CCWGG 2 cut(s) 951, 1304
BstSCI CCNGG 2 cut(s) 949, 1302
BstSFI CTRYAG 3 cut(s) 305, 1272, 1455
BstSLI GKGCMC 1 cut(s) 543
BstV1I GCAGC 7 cut(s) 33, 44, 1102, 1258, 1435, 1441, 1494
BstX2I RGATCY 1 cut(s) 72
BstXI CCANNNNNNTGG 2 cut(s) 717, 882
BstYI RGATCY 1 cut(s) 72
Bsu36I CCTNAGG 1 cut(s) 861
BsuRI GGCC 3 cut(s) 141, 370, 874
BtsCI GGATG 8 cut(s) 389, 533, 727, 784, 811, 838, 904, 1463
BtsI GCAGTG 2 cut(s) 258, 567
BtsIMutI CAGTG 4 cut(s) 27, 258, 567, 1425
BveI ACCTGC 1 cut(s) 1265
Cac8I GCNNGC 3 cut(s) 663, 729, 1541
Cfr10I RCCGGY 1 cut(s) 1417
Cfr13I GGNCC 4 cut(s) 316, 434, 526, 742
CseI GACGC 1 cut(s) 8
CsiI ACCWGGT 1 cut(s) 949
Csp6I GTAC 3 cut(s) 169, 361, 575
CviAII CATG 4 cut(s) 206, 560, 1469, 1563
CviQI GTAC 3 cut(s) 169, 361, 575
DdeI CTNAG 5 cut(s) 69, 126, 861, 1239, 1260
DpnI GATC 2 cut(s) 74, 107
DpnII GATC 2 cut(s) 72, 105
DraI TTTAAA 1 cut(s) 1393
DriI GACNNNNNGTC 1 cut(s) 409
EaeI YGGCCR 1 cut(s) 368
Eam1104I CTCTTC 2 cut(s) 840, 888
Eam1105I GACNNNNNGTC 1 cut(s) 409
EarI CTCTTC 2 cut(s) 840, 888
Eco130I CCWWGG 1 cut(s) 172
Eco24I GRGCYC 2 cut(s) 1013, 1110
Eco31I GGTCTC 1 cut(s) 1079
Eco47I GGWCC 4 cut(s) 316, 434, 526, 742
Eco57I CTGAAG 4 cut(s) 69, 840, 864, 1542
Eco81I CCTNAGG 1 cut(s) 861
Eco88I CYCGRG 1 cut(s) 1056
EcoO109I RGGNCCY 1 cut(s) 526
EcoRII CCWGG 2 cut(s) 949, 1302
EcoT14I CCWWGG 1 cut(s) 172
EcoT38I GRGCYC 2 cut(s) 1013, 1110
ErhI CCWWGG 1 cut(s) 172
FaeI CATG 4 cut(s) 209, 563, 1472, 1566
FalI AAGNNNNNCTT 2 cut(s) 1085, 1117
FaqI GGGAC 3 cut(s) 216, 785, 899
FatI CATG 4 cut(s) 205, 559, 1468, 1562
FauI CCCGC 2 cut(s) 720, 1544
FblI GTMKAC 1 cut(s) 1547
Fnu4HI GCNGC 9 cut(s) 47, 58, 1116, 1272, 1449, 1452, 1455, 1483, 1486
FokI GGATG 8 cut(s) 396, 520, 734, 791, 818, 845, 911, 1450
FriOI GRGCYC 2 cut(s) 1013, 1110
Fsp4HI GCNGC 9 cut(s) 47, 58, 1116, 1272, 1449, 1452, 1455, 1483, 1486
GluI GCNGC 9 cut(s) 47, 58, 1116, 1272, 1449, 1452, 1455, 1483, 1486
GsuI CTGGAG 1 cut(s) 308
HaeIII GGCC 3 cut(s) 141, 370, 874
HapII CCGG 5 cut(s) 319, 367, 437, 740, 1418
HgaI GACGC 1 cut(s) 8
Hin1I GRCGYC 1 cut(s) 19
Hin1II CATG 4 cut(s) 209, 563, 1472, 1566
HinfI GANTC 8 cut(s) 24, 101, 128, 410, 670, 736, 1199, 1290
HpaII CCGG 5 cut(s) 319, 367, 437, 740, 1418
HphI GGTGA 1 cut(s) 268
Hpy166II GTNNAC 2 cut(s) 565, 1548
Hpy188I TCNGA 6 cut(s) 72, 88, 127, 225, 547, 1285
Hpy188III TCNNGA 7 cut(s) 325, 689, 740, 1048, 1058, 1084, 1433
Hpy8I GTNNAC 2 cut(s) 565, 1548
Hpy99I CGWCG 3 cut(s) 24, 893, 1367
HpyCH4III ACNGT 5 cut(s) 15, 189, 298, 309, 1429
HpyCH4IV ACGT 1 cut(s) 1217
HpyCH4V TGCA 6 cut(s) 251, 665, 782, 1144, 1274, 1457
HpyF10VI GCNNNNNNNGC 1 cut(s) 1454
HpyF3I CTNAG 5 cut(s) 69, 126, 861, 1239, 1260
HpySE526I ACGT 1 cut(s) 1217
Hsp92I GRCGYC 1 cut(s) 19
Hsp92II CATG 4 cut(s) 209, 563, 1472, 1566
Kpn2I TCCGGA 1 cut(s) 739
Kzo9I GATC 2 cut(s) 72, 105
LmnI GCTCC 3 cut(s) 327, 1008, 1531
Lsp1109I GCAGC 7 cut(s) 33, 44, 1102, 1258, 1435, 1441, 1494
LweI GCATC 3 cut(s) 769, 796, 1053
MabI ACCWGGT 1 cut(s) 949
MaeII ACGT 1 cut(s) 1217
MaeIII GTNAC 2 cut(s) 1034, 1423
MalI GATC 2 cut(s) 74, 107
MbiI CCGCTC 1 cut(s) 727
MboI GATC 2 cut(s) 72, 105
MfeI CAATTG 1 cut(s) 1344
MflI RGATCY 1 cut(s) 72
MhlI GDGCHC 4 cut(s) 516, 543, 1013, 1110
MluCI AATT 8 cut(s) 398, 634, 684, 792, 1062, 1307, 1344, 1383
MlyI GAGTC 3 cut(s) 137, 419, 1284
MmeI TCCRAC 1 cut(s) 810
MroI TCCGGA 1 cut(s) 739
MseI TTAA 3 cut(s) 477, 756, 1392
MspA1I CMGCKG 1 cut(s) 1485
MspI CCGG 5 cut(s) 319, 367, 437, 740, 1418
MspR9I CCNGG 2 cut(s) 951, 1304
MunI CAATTG 1 cut(s) 1344
MvaI CCWGG 2 cut(s) 951, 1304
MwoI GCNNNNNNNGC 1 cut(s) 1454
NdeII GATC 2 cut(s) 72, 105
NlaIII CATG 4 cut(s) 209, 563, 1472, 1566
NlaIV GGNNCC 8 cut(s) 295, 323, 451, 528, 744, 912, 948, 1010
NmuCI GTSAC 1 cut(s) 1423
NspV TTCGAA 1 cut(s) 158
PcsI WCGNNNNNNNCGW 3 cut(s) 19, 1223, 1362
PfeI GAWTC 5 cut(s) 24, 101, 670, 736, 1199
PkrI GCNGC 9 cut(s) 48, 59, 1117, 1273, 1450, 1453, 1456, 1484, 1487
PleI GAGTC 3 cut(s) 136, 418, 1284
PpsI GAGTC 3 cut(s) 136, 418, 1284
PpuMI RGGWCCY 1 cut(s) 526
PsiI TTATAA 1 cut(s) 996
Psp5II RGGWCCY 1 cut(s) 526
Psp6I CCWGG 2 cut(s) 949, 1302
PspGI CCWGG 2 cut(s) 949, 1302
PspN4I GGNNCC 8 cut(s) 295, 323, 451, 528, 744, 912, 948, 1010
PspPI GGNCC 4 cut(s) 316, 434, 526, 742
PspPPI RGGWCCY 1 cut(s) 526
PstI CTGCAG 2 cut(s) 1276, 1459
PsuI RGATCY 1 cut(s) 72
RsaI GTAC 3 cut(s) 170, 362, 576
RsaNI GTAC 3 cut(s) 169, 361, 575
SaqAI TTAA 3 cut(s) 477, 756, 1392
SatI GCNGC 9 cut(s) 47, 58, 1116, 1272, 1449, 1452, 1455, 1483, 1486
Sau3AI GATC 2 cut(s) 72, 105
Sau96I GGNCC 4 cut(s) 316, 434, 526, 742
SchI GAGTC 3 cut(s) 137, 419, 1284
ScrFI CCNGG 2 cut(s) 951, 1304
SduI GDGCHC 4 cut(s) 516, 543, 1013, 1110
SexAI ACCWGGT 1 cut(s) 949
SfaNI GCATC 3 cut(s) 769, 796, 1053
SfcI CTRYAG 3 cut(s) 305, 1272, 1455
SfuI TTCGAA 1 cut(s) 158
SinI GGWCC 4 cut(s) 316, 434, 526, 742
SmlI CTYRAG 2 cut(s) 521, 1294
SmoI CTYRAG 2 cut(s) 521, 1294
Sse9I AATT 8 cut(s) 398, 634, 684, 792, 1062, 1307, 1344, 1383
SsiI CCGC 8 cut(s) 345, 392, 727, 1421, 1451, 1485, 1537, 1543
SspI AATATT 3 cut(s) 1155, 1168, 1339
StyD4I CCNGG 2 cut(s) 949, 1302
StyI CCWWGG 1 cut(s) 172
TaaI ACNGT 5 cut(s) 15, 189, 298, 309, 1429
TaiI ACGT 1 cut(s) 1220
TaqI TCGA 5 cut(s) 22, 99, 104, 158, 1083
TaqII GACCGA 1 cut(s) 1103
TasI AATT 8 cut(s) 398, 634, 684, 792, 1062, 1307, 1344, 1383
TauI GCSGC 2 cut(s) 1454, 1488
TfiI GAWTC 5 cut(s) 24, 101, 670, 736, 1199
Tru1I TTAA 3 cut(s) 477, 756, 1392
Tru9I TTAA 3 cut(s) 477, 756, 1392
TscAI CASTG 4 cut(s) 34, 258, 574, 1432
TseFI GTSAC 1 cut(s) 1423
TseI GCWGC 7 cut(s) 46, 57, 1115, 1271, 1448, 1454, 1482
Tsp45I GTSAC 1 cut(s) 1423
TspDTI ATGAA 4 cut(s) 455, 460, 992, 1488
TspGWI ACGGA 4 cut(s) 526, 938, 1164, 1351
TspRI CASTG 4 cut(s) 34, 258, 574, 1432
VpaK11BI GGWCC 4 cut(s) 316, 434, 526, 742
XapI RAATTY 3 cut(s) 398, 634, 1062
XcmI CCANNNNNNNNNTGG 1 cut(s) 940
XmiI GTMKAC 1 cut(s) 1547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.