pycom16g11430

Calnexin homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
7957598 .. 7959892
2295 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g11430.1

Sequence Viewer

Length: 1581 bp
ATGGCAGGAACACGGTGGCGTAATTTCACTGACCTCCTTCTTCTTCTGCTGGTACTGCTGATTGGCTGCTCCGCTTCTCAGATCCGCGCTTCTTCCGAACATGAAGTCGATTCGATCTTTTACGAGCCATTTTCTGAGTCGTTTGAAGGCCGATGGATTGTTTCTTCCAAGGACGAGTACCAAGGGGTATGGAAATTGTCCAAAAGTGAGGGACATGATGATTACGGGCTGTTGGTAAGTGAGAAGGCGAGGAAGTATGCTGTGGTGAAAGAGCTCGACAAGGCTGTGAGCCTCAAGGATGGAACCGTTGTCCTGCAGTTTGAGGTCCGGCTCCAGAACGGGCTCGAATGTGGCGGTGCTTACTTGAAATACCTCCGCCCCCAGGAGGCGGGTTGGAAAGCGGAGGAATTTGACAATGAATCGCCGTATTCCATTATGTTTGGACCGGACAAATGTGGTTCCACAAACAAGGTTCATTTCATCTTCAAGCACAAGAACCCCAAGAGTGGAGAGTATGTTGAGCACCATCTCAAGGACCCTCCATCCGTGCCCTCCGACAAGCTGTCTCATGTTTATACTGCAATATTGAAACCTGATAACCAAGTTAGGATTTTAATTGATGGGGAGGAGAAGAAGAAGGCAAATCTTCTTTCGGCTAAAGATTTCGAGCCTGCGTTGATTCCAGCCAAGACAATTCCTGACCCTGAGGATAAGAAGCCAGAGGATTGGGATGAGCGGGTGAAGATTCCAGACCCCAATGCCGTTAAGCCTGATGATTGGGATGAGGATGCACCAATGGAAATTGAAGACGAGGATGCTGTGAAACCTGAAGGGTGGTTGGATGATGAACCTGATGAGATTGATGACCCTGAGGCGACAAGACCAGAAGATTGGGACGACGAAGAGGATGGTGTATGGGAACCGCCAAAGGCTGATAACCCCAAGTGTTCATTGGCACCAGGTTGTGGAGAATGGAAGAAGCCAATGAAACATAATCCTGCTTATAAAGGAAAATGGAGGCCTCCTATGATTGACAACCCCAGTTACAAGGGCATATGGAAGCCTCGAGAAATTCCAAATCCTGATTACTTCGAGACCGAGAAACCCGACTTTGAGCCCATTGCTGCTATTGGCATTGAGATCTGGACAATGCAGGATGGAATATTGATTGACAATATTCTCATAGCTGATAATGAGAAGGTTGCTGAATCTGTTAGGCTAACAACATGGAAGCCGAAGTTTGAGACTGAGAAGGAGAAACAGAAGGCTGGGGAAGAAGCTGCAGGTCTTTCGGATGGACTCTCAAGCTACCAGGATCTGATTGAGAAGGGAGAAAAACAGCCCAATATGACAATTGGTGTTATTGTTTCCGTCGTGGTTGTTCTCTTGTCAGTGTTCTTTAAACTCTTCTTTGGTGGCAAGAAACCGGTGGTAACTGTTCCTGAACCAAACAGGGCTGCGGCTGCAGAGACTCCCCGCGATGAAGGAAGCAGTGGAGAGAAGGAAGACGAGAATGAGAAAGAAGAAGAAGAAGCTGCTCCTCCTCCCCGCAGGCGGCCTACCACCAGAAGGGAAACATGA

Protein Analysis

527

Amino Acids

59.49

Weight (kDa)

4.75

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Calreticulin PF00262 40 - 395 2e-145 Calreticulin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1005
Acc36I ACCTGC 1 cut(s) 1274
AccB1I GGYRCC 1 cut(s) 955
AccB7I CCANNNNNTGG 1 cut(s) 965
AccBSI CCGCTC 1 cut(s) 736
AccII CGCG 2 cut(s) 87, 1479
AclWI GGATC 2 cut(s) 76, 1323
AcsI RAATTY 2 cut(s) 407, 1071
AcuI CTGAAG 1 cut(s) 849
AfaI GTAC 2 cut(s) 54, 179
AfiI CCNNNNNNNGG 8 cut(s) 382, 385, 388, 506, 532, 965, 1554, 1569
AgeI ACCGGT 1 cut(s) 1426
AgsI TTSAA 5 cut(s) 146, 367, 487, 589, 806
AhdI GACNNNNNGTC 1 cut(s) 562
AjnI CCWGG 3 cut(s) 381, 958, 1311
AluBI AGCT 6 cut(s) 274, 562, 1187, 1280, 1308, 1535
AluI AGCT 6 cut(s) 274, 562, 1187, 1280, 1308, 1535
Alw21I GWGCWC 2 cut(s) 276, 525
Alw26I GTCTC 4 cut(s) 570, 1088, 1238, 1463
AlwI GGATC 2 cut(s) 76, 1323
AlwNI CAGNNNCTG 1 cut(s) 1318
Ama87I CYCGRG 1 cut(s) 1065
AoxI GGCC 3 cut(s) 148, 1019, 1556
ApeKI GCWGC 6 cut(s) 66, 1124, 1280, 1457, 1463, 1535
ApoI RAATTY 2 cut(s) 407, 1071
ArsI GACNNNNNNTTYG 2 cut(s) 90, 122
AsiGI ACCGGT 1 cut(s) 1426
AspLEI GCGC 1 cut(s) 89
AspS9I GGNCC 3 cut(s) 325, 443, 535
AsuHPI GGTGA 2 cut(s) 277, 751
AvaI CYCGRG 1 cut(s) 1065
AvaII GGWCC 3 cut(s) 325, 443, 535
AxyI CCTNAGG 2 cut(s) 705, 870
BaeGI GKGCMC 1 cut(s) 552
BanI GGYRCC 1 cut(s) 955
BanII GRGCYC 3 cut(s) 276, 345, 1119
BbsI GAAGAC 2 cut(s) 813, 1512
Bbv12I GWGCWC 2 cut(s) 276, 525
BbvI GCAGC 6 cut(s) 53, 1111, 1267, 1444, 1450, 1522
BccI CCATC 8 cut(s) 147, 293, 534, 550, 614, 902, 1151, 1289
BceAI ACGGC 2 cut(s) 409, 746
BcgI CGANNNNNNTGC 2 cut(s) 1272, 1306
BciT130I CCWGG 3 cut(s) 383, 960, 1313
BcoDI GTCTC 4 cut(s) 570, 1088, 1238, 1463
BfmI CTRYAG 3 cut(s) 314, 1281, 1464
BfuAI ACCTGC 1 cut(s) 1274
BglII AGATCT 1 cut(s) 1140
BisI GCNGC 8 cut(s) 67, 1125, 1281, 1458, 1461, 1464, 1536, 1556
BlsI GCNGC 8 cut(s) 68, 1126, 1282, 1459, 1462, 1465, 1537, 1557
Bme1390I CCNGG 3 cut(s) 383, 960, 1313
Bme18I GGWCC 3 cut(s) 325, 443, 535
BmeRI GACNNNNNGTC 1 cut(s) 562
BmeT110I CYCGRG 1 cut(s) 1065
BmgT120I GGNCC 3 cut(s) 325, 443, 535
BmiI GGNNCC 6 cut(s) 304, 332, 460, 537, 921, 957
BmrFI CCNGG 3 cut(s) 383, 960, 1313
BmrI ACTGGG 1 cut(s) 1035
BmsI GCATC 2 cut(s) 778, 805
BmuI ACTGGG 1 cut(s) 1035
BpiI GAAGAC 2 cut(s) 813, 1512
BpmI CTGGAG 1 cut(s) 317
BpuEI CTTGAG 3 cut(s) 278, 515, 1288
BsaI GGTCTC 1 cut(s) 1088
BsaJI CCNNGG 3 cut(s) 168, 181, 381
BsaWI WCCGGW 2 cut(s) 445, 1426
BsaXI ACNNNNNCTCC 2 cut(s) 501, 531
Bsc4I CCNNNNNNNGG 8 cut(s) 382, 385, 388, 506, 532, 965, 1554, 1569
Bse118I RCCGGY 1 cut(s) 1426
Bse1I ACTGG 1 cut(s) 1041
Bse21I CCTNAGG 2 cut(s) 705, 870
Bse3DI GCAATG 1 cut(s) 1119
BseBI CCWGG 3 cut(s) 383, 960, 1313
BseDI CCNNGG 3 cut(s) 168, 181, 381
BseLI CCNNNNNNNGG 8 cut(s) 382, 385, 388, 506, 532, 965, 1554, 1569
BseMI GCAATG 1 cut(s) 1119
BseMII CTCAG 5 cut(s) 92, 126, 696, 861, 1239
BseNI ACTGG 1 cut(s) 1041
BseRI GAGGAG 3 cut(s) 641, 1530, 1533
BseSI GKGCMC 1 cut(s) 552
BseXI GCAGC 6 cut(s) 53, 1111, 1267, 1444, 1450, 1522
BseYI CCCAGC 1 cut(s) 1268
Bsh1236I CGCG 2 cut(s) 87, 1479
BshFI GGCC 3 cut(s) 150, 1021, 1558
BshNI GGYRCC 1 cut(s) 955
BshTI ACCGGT 1 cut(s) 1426
BsiHKAI GWGCWC 2 cut(s) 276, 525
BsiHKCI CYCGRG 1 cut(s) 1065
BsiSI CCGG 3 cut(s) 328, 446, 1427
BslFI GGGAC 2 cut(s) 225, 908
BslI CCNNNNNNNGG 8 cut(s) 382, 385, 388, 506, 532, 965, 1554, 1569
BsmAI GTCTC 4 cut(s) 570, 1088, 1238, 1463
BsmFI GGGAC 2 cut(s) 225, 908
BsnI GGCC 3 cut(s) 150, 1021, 1558
Bso31I GGTCTC 1 cut(s) 1088
BsoBI CYCGRG 1 cut(s) 1065
Bsp1286I GDGCHC 5 cut(s) 276, 345, 525, 552, 1119
Bsp143I GATC 4 cut(s) 81, 114, 1140, 1315
BspANI GGCC 3 cut(s) 150, 1021, 1558
BspCNI CTCAG 5 cut(s) 91, 127, 697, 862, 1240
BspFNI CGCG 2 cut(s) 87, 1479
BspLI GGNNCC 6 cut(s) 304, 332, 460, 537, 921, 957
BspMAI CTGCAG 3 cut(s) 318, 1285, 1468
BspMI ACCTGC 1 cut(s) 1274
BspPI GGATC 2 cut(s) 76, 1323
BspT107I GGYRCC 1 cut(s) 955
BspTNI GGTCTC 1 cut(s) 1088
BsrBI CCGCTC 1 cut(s) 736
BsrDI GCAATG 1 cut(s) 1119
BsrFI RCCGGY 1 cut(s) 1426
BsrI ACTGG 1 cut(s) 1041
BssAI RCCGGY 1 cut(s) 1426
BssECI CCNNGG 3 cut(s) 168, 181, 381
BssMI GATC 4 cut(s) 81, 114, 1140, 1315
BssT1I CCWWGG 2 cut(s) 168, 181
Bst2UI CCWGG 3 cut(s) 383, 960, 1313
Bst4CI ACNGT 3 cut(s) 15, 307, 1438
Bst6I CTCTTC 2 cut(s) 897, 1412
BstC8I GCNNGC 2 cut(s) 672, 1553
BstDEI CTNAG 5 cut(s) 78, 135, 705, 870, 1248
BstFNI CGCG 2 cut(s) 87, 1479
BstHHI GCGC 1 cut(s) 89
BstKTI GATC 4 cut(s) 84, 117, 1143, 1318
BstMAI GTCTC 4 cut(s) 570, 1088, 1238, 1463
BstMBI GATC 4 cut(s) 81, 114, 1140, 1315
BstMWI GCNNNNNNNGC 2 cut(s) 55, 1463
BstNI CCWGG 3 cut(s) 383, 960, 1313
BstSCI CCNGG 3 cut(s) 381, 958, 1311
BstSFI CTRYAG 3 cut(s) 314, 1281, 1464
BstSLI GKGCMC 1 cut(s) 552
BstUI CGCG 2 cut(s) 87, 1479
BstV1I GCAGC 6 cut(s) 53, 1111, 1267, 1444, 1450, 1522
BstV2I GAAGAC 2 cut(s) 813, 1512
BstX2I RGATCY 3 cut(s) 81, 1140, 1315
BstXI CCANNNNNNTGG 2 cut(s) 726, 891
BstYI RGATCY 3 cut(s) 81, 1140, 1315
Bsu36I CCTNAGG 2 cut(s) 705, 870
BsuRI GGCC 3 cut(s) 150, 1021, 1558
BtgZI GCGATG 1 cut(s) 1494
BtsI GCAGTG 1 cut(s) 1498
BtsIMutI CAGTG 3 cut(s) 27, 1398, 1498
BveI ACCTGC 1 cut(s) 1274
Cac8I GCNNGC 2 cut(s) 672, 1553
CaiI CAGNNNCTG 1 cut(s) 1318
CfoI GCGC 1 cut(s) 89
Cfr10I RCCGGY 1 cut(s) 1426
Cfr13I GGNCC 3 cut(s) 325, 443, 535
CsiI ACCWGGT 1 cut(s) 958
Csp6I GTAC 2 cut(s) 53, 178
CspAI ACCGGT 1 cut(s) 1426
CviAII CATG 5 cut(s) 101, 215, 569, 1227, 1578
CviQI GTAC 2 cut(s) 53, 178
DdeI CTNAG 5 cut(s) 78, 135, 705, 870, 1248
DpnI GATC 4 cut(s) 83, 116, 1142, 1317
DpnII GATC 4 cut(s) 81, 114, 1140, 1315
DraI TTTAAA 1 cut(s) 1402
DriI GACNNNNNGTC 1 cut(s) 562
Eam1104I CTCTTC 2 cut(s) 897, 1412
Eam1105I GACNNNNNGTC 1 cut(s) 562
EarI CTCTTC 2 cut(s) 897, 1412
EciI GGCGGA 1 cut(s) 365
Ecl136II GAGCTC 1 cut(s) 274
Eco130I CCWWGG 2 cut(s) 168, 181
Eco147I AGGCCT 1 cut(s) 1021
Eco24I GRGCYC 3 cut(s) 276, 345, 1119
Eco31I GGTCTC 1 cut(s) 1088
Eco47I GGWCC 3 cut(s) 325, 443, 535
Eco53kI GAGCTC 1 cut(s) 274
Eco57I CTGAAG 1 cut(s) 849
Eco81I CCTNAGG 2 cut(s) 705, 870
Eco88I CYCGRG 1 cut(s) 1065
EcoICRI GAGCTC 1 cut(s) 274
EcoO109I RGGNCCY 1 cut(s) 535
EcoRII CCWGG 3 cut(s) 381, 958, 1311
EcoT14I CCWWGG 2 cut(s) 168, 181
EcoT38I GRGCYC 3 cut(s) 276, 345, 1119
ErhI CCWWGG 2 cut(s) 168, 181
FaeI CATG 5 cut(s) 104, 218, 572, 1230, 1581
FaqI GGGAC 2 cut(s) 225, 908
FatI CATG 5 cut(s) 100, 214, 568, 1226, 1577
FauI CCCGC 4 cut(s) 382, 729, 1484, 1556
FauNDI CATATG 1 cut(s) 1055
Fnu4HI GCNGC 8 cut(s) 67, 1125, 1281, 1458, 1461, 1464, 1536, 1556
FriOI GRGCYC 3 cut(s) 276, 345, 1119
Fsp4HI GCNGC 8 cut(s) 67, 1125, 1281, 1458, 1461, 1464, 1536, 1556
GlaI GCGC 1 cut(s) 88
GluI GCNGC 8 cut(s) 67, 1125, 1281, 1458, 1461, 1464, 1536, 1556
GsaI CCCAGC 1 cut(s) 1272
GsuI CTGGAG 1 cut(s) 317
HaeIII GGCC 3 cut(s) 150, 1021, 1558
HapII CCGG 3 cut(s) 328, 446, 1427
HhaI GCGC 1 cut(s) 89
Hin1II CATG 5 cut(s) 104, 218, 572, 1230, 1581
Hin6I GCGC 1 cut(s) 87
HinP1I GCGC 1 cut(s) 87
HinfI GANTC 8 cut(s) 110, 137, 419, 679, 745, 1208, 1299, 1471
HpaII CCGG 3 cut(s) 328, 446, 1427
HphI GGTGA 2 cut(s) 277, 751
Hpy188I TCNGA 6 cut(s) 81, 97, 136, 556, 1294, 1320
Hpy188III TCNNGA 8 cut(s) 334, 698, 749, 1067, 1082, 1093, 1144, 1442
Hpy99I CGWCG 2 cut(s) 902, 1376
HpyCH4III ACNGT 3 cut(s) 15, 307, 1438
HpyCH4V TGCA 6 cut(s) 316, 581, 791, 1153, 1283, 1466
HpyF10VI GCNNNNNNNGC 2 cut(s) 55, 1463
HpyF3I CTNAG 5 cut(s) 78, 135, 705, 870, 1248
Hsp92II CATG 5 cut(s) 104, 218, 572, 1230, 1581
HspAI GCGC 1 cut(s) 87
Kzo9I GATC 4 cut(s) 81, 114, 1140, 1315
LmnI GCTCC 3 cut(s) 74, 336, 1543
Lsp1109I GCAGC 6 cut(s) 53, 1111, 1267, 1444, 1450, 1522
LweI GCATC 2 cut(s) 778, 805
MabI ACCWGGT 1 cut(s) 958
MaeIII GTNAC 2 cut(s) 1043, 1432
MalI GATC 4 cut(s) 83, 116, 1142, 1317
MbiI CCGCTC 1 cut(s) 736
MboI GATC 4 cut(s) 81, 114, 1140, 1315
MfeI CAATTG 1 cut(s) 1353
MflI RGATCY 3 cut(s) 81, 1140, 1315
MhlI GDGCHC 5 cut(s) 276, 345, 525, 552, 1119
MluCI AATT 8 cut(s) 22, 194, 407, 615, 693, 801, 1071, 1353
MlyI GAGTC 3 cut(s) 146, 1293, 1465
MmeI TCCRAC 3 cut(s) 374, 579, 819
MseI TTAA 3 cut(s) 614, 765, 1401
MspI CCGG 3 cut(s) 328, 446, 1427
MspR9I CCNGG 3 cut(s) 383, 960, 1313
MunI CAATTG 1 cut(s) 1353
MvaI CCWGG 3 cut(s) 383, 960, 1313
MvnI CGCG 2 cut(s) 87, 1479
MwoI GCNNNNNNNGC 2 cut(s) 55, 1463
NdeI CATATG 1 cut(s) 1055
NdeII GATC 4 cut(s) 81, 114, 1140, 1315
NlaIII CATG 5 cut(s) 104, 218, 572, 1230, 1581
NlaIV GGNNCC 6 cut(s) 304, 332, 460, 537, 921, 957
PaeR7I CTCGAG 1 cut(s) 1065
PceI AGGCCT 1 cut(s) 1021
PfeI GAWTC 5 cut(s) 110, 419, 679, 745, 1208
PflMI CCANNNNNTGG 1 cut(s) 965
PinAI ACCGGT 1 cut(s) 1426
PkrI GCNGC 8 cut(s) 68, 1126, 1282, 1459, 1462, 1465, 1537, 1557
PleI GAGTC 3 cut(s) 145, 1293, 1465
PpsI GAGTC 3 cut(s) 145, 1293, 1465
PpuMI RGGWCCY 1 cut(s) 535
PsiI TTATAA 1 cut(s) 1005
Psp124BI GAGCTC 1 cut(s) 276
Psp5II RGGWCCY 1 cut(s) 535
Psp6I CCWGG 3 cut(s) 381, 958, 1311
PspFI CCCAGC 1 cut(s) 1268
PspGI CCWGG 3 cut(s) 381, 958, 1311
PspN4I GGNNCC 6 cut(s) 304, 332, 460, 537, 921, 957
PspPI GGNCC 3 cut(s) 325, 443, 535
PspPPI RGGWCCY 1 cut(s) 535
PstI CTGCAG 3 cut(s) 318, 1285, 1468
PstNI CAGNNNCTG 1 cut(s) 1318
PsuI RGATCY 3 cut(s) 81, 1140, 1315
RsaI GTAC 2 cut(s) 54, 179
RsaNI GTAC 2 cut(s) 53, 178
SacI GAGCTC 1 cut(s) 276
SaqAI TTAA 3 cut(s) 614, 765, 1401
SatI GCNGC 8 cut(s) 67, 1125, 1281, 1458, 1461, 1464, 1536, 1556
Sau3AI GATC 4 cut(s) 81, 114, 1140, 1315
Sau96I GGNCC 3 cut(s) 325, 443, 535
SchI GAGTC 3 cut(s) 146, 1293, 1465
ScrFI CCNGG 3 cut(s) 383, 960, 1313
SduI GDGCHC 5 cut(s) 276, 345, 525, 552, 1119
SexAI ACCWGGT 1 cut(s) 958
SfaNI GCATC 2 cut(s) 778, 805
SfcI CTRYAG 3 cut(s) 314, 1281, 1464
Sfr274I CTCGAG 1 cut(s) 1065
SinI GGWCC 3 cut(s) 325, 443, 535
SlaI CTCGAG 1 cut(s) 1065
SmlI CTYRAG 4 cut(s) 293, 530, 1065, 1303
SmoI CTYRAG 4 cut(s) 293, 530, 1065, 1303
Sse9I AATT 8 cut(s) 22, 194, 407, 615, 693, 801, 1071, 1353
SseBI AGGCCT 1 cut(s) 1021
SspI AATATT 3 cut(s) 585, 1164, 1177
SstI GAGCTC 1 cut(s) 276
StuI AGGCCT 1 cut(s) 1021
StyD4I CCNGG 3 cut(s) 381, 958, 1311
StyI CCWWGG 2 cut(s) 168, 181
TaaI ACNGT 3 cut(s) 15, 307, 1438
TaqI TCGA 7 cut(s) 108, 113, 276, 345, 666, 1066, 1092
TaqII GACCGA 1 cut(s) 1112
TasI AATT 8 cut(s) 22, 194, 407, 615, 693, 801, 1071, 1353
TauI GCSGC 2 cut(s) 1463, 1558
TfiI GAWTC 5 cut(s) 110, 419, 679, 745, 1208
Tru1I TTAA 3 cut(s) 614, 765, 1401
Tru9I TTAA 3 cut(s) 614, 765, 1401
TscAI CASTG 3 cut(s) 34, 1398, 1498
TseI GCWGC 6 cut(s) 66, 1124, 1280, 1457, 1463, 1535
TspDTI ATGAA 8 cut(s) 117, 432, 464, 469, 861, 939, 1001, 1497
TspGWI ACGGA 2 cut(s) 535, 1360
TspRI CASTG 3 cut(s) 34, 1398, 1498
Van91I CCANNNNNTGG 1 cut(s) 965
VpaK11BI GGWCC 3 cut(s) 325, 443, 535
XapI RAATTY 2 cut(s) 407, 1071
XcmI CCANNNNNNNNNTGG 1 cut(s) 949
XhoI CTCGAG 1 cut(s) 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.