Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0003158

Physical Location & Seq

Genomic Coordinates Reverse (-)

59728546 .. 59730781

Gene Structure 2236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG282400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGTCTTGATGGAAGGGAGGCCTAAGATCACTGAGCTTCGGCCACTTCTACTGCTACTGATCGCAGCTTGCTTCGCCATTGAGATCCACGCTTCTTCTCAAAACCACGACGTCAATGCGATCTTTTACGAGCCGTTCGATGAGTCATTCGAAGGTCGCTGGATTGTTTCCGCCAAAGATGAGTACAAAGGTGTGTGGAAACTATCAAAGAGTGAGGGGCATGATGATTATGGGCTTTTGGTGAGTGAGAAAGCGAGGAAGTATGCGCTAGTGAAAGAGCTAGATGAGGCTGTGAGCCTTAATGGTAGAACTATTGTGTTGCAGTTCGAGGTTCGGCTACAGAATAGCCTTGAATGTGGTGGTGCTTACTTGAAGTACCTCCGGCCACAGGAGGCTGGGTGGAAACCTGAATGGTTTGATAATGATTCCCCGTATTCAATTATGTTTGGACCTGATAAATGTGGCACGACGAATAGGGTTCATTTAATTTTTAAGCACAAGAACCCCAAGAGTGGTGAGTACGTTGAGCACCATCTCAAGAACACTCCAACTGTGCCTGATGACAGACTCTCCCATGTCTACACGGCAATAGTGAAAGCCGATAAAGAAGTTAGAATTTTGGTAGATGGGGAGGAGAAGAAGAAGGCAAGGTTCCTTTCTGCTCAAGATTTTGAACCTGCATTGATTCCAGCCAAGACTATTCCTGACCCAAATGATAAGAAGCCAGCGGATTGGGACGAGCGGCCAAAGATTCCAGATCCAGATGCTGTGAAGCCTGATGATTGGGATGAAAATGCTCCAATGGAAATTGAAGATGAGGAAGCTGAGAAACCTGAAGGATGGTTGGATGATGAGCCTAACGAGATTGATGACCCTGAAGCGACAAAGCCAGAGGATTGGGATGATGAAGAGGATGGTGAATGGGAACCACCAAAGCTGGAAAACCCCAAGTGCTTCTTGGCACCAGGTTGTGGAAAATGGAAGAGGCCGATGAAGAGAAATCCTGCTTATAAAGGAAAATGGCACCGTCCTCTGATTGAGAATCCCAGTTACAAGGGTATCTGGAAACCTCAACAAATCCCAAACCCTCATTACTTTGAGACTGATAAGCCTGACTTTGAGGCCATAGCTGCCATTGGCATTGAGATCTGGACAATGCAGGACGGCATATTGTTTGACAACATTCTAATAGCTGATAATGAGAAGGTTGCCGAATCTTATAGGAGAACAACATGGAAGCCAAAGTTTAATGTTGAGAAAGAGAAGCAAAGGGCTGAGGAGGCAGCTGCAGGTCTTTCATTTGGACTCTCAAGCATCCAGAAAAAAATATTTGACGTTCTCTACAAGATAGCAGGTGTTTCGTTCTTGGATGCATACAAACCCAAGATCATTGATCTAATTGAGAAAGCAGAAAAACAGCCCAATATTACAGTTGGTGTCATTGTATCCATCGTGGTCATTCTTTTGACAGTTCTCTTCAAAATTCTTTTTGGTGGCAAAGCACCTGCGGTTGCTCCTCATGAACCTTACAGGGGAGCGGCTGCAGGGATTTCCACCAAGGAAGGAAGCGGAAACAGTGGGGTGAAGGCAGATGAGACTGAGAAGGAAGATGCCACTCCCCGCAGGAGATCTACCAGAAGGGAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0009507 GO:0009536 GO:0012505 GO:0016020 GO:0030054 GO:0030312 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04141 ko04145 ko04612 ko04918 ko05166 map04141 map04145 map04612 map04918 map05166

Pfam Domains

Protein Families

Calreticulin

Protein Analysis

549

Amino Acids

62.33

Weight (kDa)

5.23

Isoelectric Point (pI)

41.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Calreticulin	PF00262	42 - 397	2.2e-140	Calreticulin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07340 AT5G07340 AT5G61790
fragaria_vesca	FvH4_4g22170 FvH4_5g09940
malus_domestica	MD00G1076300.v1.1 MD08G1097600.v1.1 MD08G1097700.v1.1 MD13G1134200.v1.1 MD14G1144700.v1.1 MD16G1144800.v1.1
prunus_persica	Prupe.1G211400_v2.0.a1 Prupe.5G139100_v2.0.a1 Prupe.5G139100_v2.0.a1
pyrus_communis	pycom06g11940 pycom13g11700 pycom14g12020 pycom16g11430
rosa_chinensis	RchiOBHm_Chr4g0428401 RchiOBHm_Chr7g0188351
rosa_laevigata	RLG00000004706 RLG00000007154
rosa_multiflora	Rmu_sc0004698.1_g000004 Rmu_sc0008750.1_g000004
rosa_roxburghii	Rroxscaffold_3G00266480 Rroxscaffold_5G00370070
rosa_rugosa	Rorug04G0225200 Rorug06G0490000 Rorug06G0490100
rosa_samantha	Rh4AG282400 Rh4BG288000 Rh4CG303600 Rh4DG285100 Rh7BG096200 Rh7CG096500
rosa_wichuraiana	Rw4G024510 Rw7G008160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1011
AarI	CACCTGC	2 cut(s)	1343, 1513
AatII	GACGTC	1 cut(s)	114
Acc36I	ACCTGC	4 cut(s)	685, 1280, 1343, 1513
AccB1I	GGYRCC	2 cut(s)	961, 1023
AccB7I	CCANNNNNTGG	1 cut(s)	971
AccBSI	CCGCTC	2 cut(s)	742, 1538
AccI	GTMKAC	1 cut(s)	579
AciI	CCGC	7 cut(s)	171, 728, 742, 1508, 1538, 1569, 1621
AclWI	GGATC	2 cut(s)	79, 752
AcoI	YGGCCR	3 cut(s)	41, 383, 743
AcsI	RAATTY	2 cut(s)	615, 1482
AcuI	CTGAAG	2 cut(s)	855, 897
AcyI	GRCGYC	1 cut(s)	111
AfaI	GTAC	3 cut(s)	185, 377, 521
AfiI	CCNNNNNNNGG	4 cut(s)	388, 512, 971, 1532
AgsI	TTSAA	6 cut(s)	353, 373, 438, 674, 812, 1480
AjnI	CCWGG	1 cut(s)	964
AluBI	AGCT	8 cut(s)	37, 68, 280, 824, 937, 1130, 1193, 1286
AluI	AGCT	8 cut(s)	37, 68, 280, 824, 937, 1130, 1193, 1286
Alw21I	GWGCWC	1 cut(s)	531
Alw26I	GTCTC	2 cut(s)	1094, 1589
AlwI	GGATC	2 cut(s)	79, 752
AlwNI	CAGNNNCTG	1 cut(s)	767
AoxI	GGCC	6 cut(s)	20, 41, 383, 743, 986, 1122
ApeKI	GCWGC	5 cut(s)	65, 1130, 1283, 1286, 1541
ApoI	RAATTY	2 cut(s)	615, 1482
AspLEI	GCGC	1 cut(s)	268
AspS9I	GGNCC	1 cut(s)	449
AsuHPI	GGTGA	4 cut(s)	253, 527, 929, 1594
AsuII	TTCGAA	1 cut(s)	150
AvaII	GGWCC	1 cut(s)	449
BaeI	ACNNNNGTAYC	2 cut(s)	1042, 1075
BanI	GGYRCC	2 cut(s)	961, 1023
Bbv12I	GWGCWC	1 cut(s)	531
BbvCI	CCTCAGC	1 cut(s)	1275
BbvI	GCAGC	5 cut(s)	77, 1117, 1273, 1295, 1528
BccI	CCATC	6 cut(s)	4, 540, 620, 834, 908, 1457
BceAI	ACGGC	3 cut(s)	118, 600, 1180
BcgI	CGANNNNNNTGC	4 cut(s)	98, 132, 1341, 1375
BciT130I	CCWGG	1 cut(s)	966
BciVI	GTATCC	1 cut(s)	1456
BcoDI	GTCTC	2 cut(s)	1094, 1589
BfaI	CTAG	2 cut(s)	269, 281
BfmI	CTRYAG	3 cut(s)	338, 1287, 1542
BfuAI	ACCTGC	4 cut(s)	685, 1280, 1343, 1513
BfuI	GTATCC	1 cut(s)	1456
BglII	AGATCT	2 cut(s)	1146, 1628
BisI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
BlsI	GCNGC	7 cut(s)	67, 744, 1132, 1285, 1288, 1540, 1543
Bme1390I	CCNGG	1 cut(s)	966
Bme18I	GGWCC	1 cut(s)	449
BmgT120I	GGNCC	1 cut(s)	449
BmiI	GGNNCC	4 cut(s)	653, 927, 963, 1025
BmrFI	CCNGG	1 cut(s)	966
BmrI	ACTGGG	1 cut(s)	1041
BmsI	GCATC	4 cut(s)	754, 1323, 1360, 1600
BmuI	ACTGGG	1 cut(s)	1041
Bpu10I	CCTNAGC	1 cut(s)	1275
Bpu14I	TTCGAA	1 cut(s)	150
BpuEI	CTTGAG	3 cut(s)	521, 648, 1294
BsaHI	GRCGYC	1 cut(s)	111
BsaJI	CCNNGG	1 cut(s)	1557
BsaXI	ACNNNNNCTCC	4 cut(s)	383, 413, 554, 584
Bsc4I	CCNNNNNNNGG	4 cut(s)	388, 512, 971, 1532
Bse1I	ACTGG	1 cut(s)	1047
BseBI	CCWGG	1 cut(s)	966
BseDI	CCNNGG	1 cut(s)	1557
BseGI	GGATG	7 cut(s)	793, 845, 853, 907, 919, 1314, 1375
BseLI	CCNNNNNNNGG	4 cut(s)	388, 512, 971, 1532
BseMII	CTCAG	4 cut(s)	24, 816, 1266, 1590
BseNI	ACTGG	1 cut(s)	1047
BseRI	GAGGAG	3 cut(s)	647, 1292, 1506
BseXI	GCAGC	5 cut(s)	77, 1117, 1273, 1295, 1528
BseYI	CCCAGC	1 cut(s)	395
BshFI	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
BshNI	GGYRCC	2 cut(s)	961, 1023
BsiHKAI	GWGCWC	1 cut(s)	531
BsiSI	CCGG	1 cut(s)	382
BslFI	GGGAC	1 cut(s)	749
BslI	CCNNNNNNNGG	4 cut(s)	388, 512, 971, 1532
BsmAI	GTCTC	2 cut(s)	1094, 1589
BsmFI	GGGAC	1 cut(s)	749
BsnI	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
Bsp119I	TTCGAA	1 cut(s)	150
Bsp1286I	GDGCHC	1 cut(s)	531
Bsp143I	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
BspACI	CCGC	7 cut(s)	171, 728, 742, 1508, 1538, 1569, 1621
BspANI	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
BspCNI	CTCAG	4 cut(s)	25, 817, 1267, 1591
BspHI	TCATGA	1 cut(s)	1519
BspLI	GGNNCC	4 cut(s)	653, 927, 963, 1025
BspMAI	CTGCAG	2 cut(s)	1291, 1546
BspMI	ACCTGC	4 cut(s)	685, 1280, 1343, 1513
BspPI	GGATC	2 cut(s)	79, 752
BspT104I	TTCGAA	1 cut(s)	150
BspT107I	GGYRCC	2 cut(s)	961, 1023
BsrBI	CCGCTC	2 cut(s)	742, 1538
BsrI	ACTGG	1 cut(s)	1047
BssECI	CCNNGG	1 cut(s)	1557
BssMI	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
BssNI	GRCGYC	1 cut(s)	111
BssT1I	CCWWGG	1 cut(s)	1557
Bst2UI	CCWGG	1 cut(s)	966
Bst4CI	ACNGT	5 cut(s)	553, 1028, 1432, 1471, 1577
Bst6I	CTCTTC	4 cut(s)	903, 977, 989, 1481
BstACI	GRCGYC	1 cut(s)	111
BstBI	TTCGAA	1 cut(s)	150
BstC8I	GCNNGC	2 cut(s)	70, 726
BstDEI	CTNAG	5 cut(s)	24, 33, 825, 1275, 1599
BstF5I	GGATG	7 cut(s)	793, 845, 853, 907, 919, 1314, 1375
BstHHI	GCGC	1 cut(s)	268
BstKTI	GATC	9 cut(s)	30, 63, 87, 123, 760, 1149, 1389, 1396, 1631
BstMAI	GTCTC	2 cut(s)	1094, 1589
BstMBI	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
BstMWI	GCNNNNNNNGC	3 cut(s)	74, 1130, 1280
BstNI	CCWGG	1 cut(s)	966
BstSCI	CCNGG	1 cut(s)	964
BstSFI	CTRYAG	3 cut(s)	338, 1287, 1542
BstV1I	GCAGC	5 cut(s)	77, 1117, 1273, 1295, 1528
BstX2I	RGATCY	4 cut(s)	84, 757, 1146, 1628
BstXI	CCANNNNNNTGG	2 cut(s)	732, 897
BstYI	RGATCY	4 cut(s)	84, 757, 1146, 1628
BsuI	GTATCC	1 cut(s)	1456
BsuRI	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
BtsCI	GGATG	7 cut(s)	793, 845, 853, 907, 919, 1314, 1375
BtsIMutI	CAGTG	2 cut(s)	30, 1582
BveI	ACCTGC	4 cut(s)	685, 1280, 1343, 1513
Cac8I	GCNNGC	2 cut(s)	70, 726
CaiI	CAGNNNCTG	1 cut(s)	767
CciI	TCATGA	1 cut(s)	1519
CfoI	GCGC	1 cut(s)	268
Cfr13I	GGNCC	1 cut(s)	449
CsiI	ACCWGGT	1 cut(s)	964
Csp6I	GTAC	3 cut(s)	184, 376, 520
CviAII	CATG	4 cut(s)	221, 575, 1233, 1520
CviQI	GTAC	3 cut(s)	184, 376, 520
DdeI	CTNAG	5 cut(s)	24, 33, 825, 1275, 1599
DpnI	GATC	9 cut(s)	29, 62, 86, 122, 759, 1148, 1388, 1395, 1630
DpnII	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
EaeI	YGGCCR	3 cut(s)	41, 383, 743
Eam1104I	CTCTTC	4 cut(s)	903, 977, 989, 1481
EarI	CTCTTC	4 cut(s)	903, 977, 989, 1481
EciI	GGCGGA	1 cut(s)	160
Eco130I	CCWWGG	1 cut(s)	1557
Eco147I	AGGCCT	1 cut(s)	22
Eco47I	GGWCC	1 cut(s)	449
Eco57I	CTGAAG	2 cut(s)	855, 897
EcoRII	CCWGG	1 cut(s)	964
EcoT14I	CCWWGG	1 cut(s)	1557
EcoT22I	ATGCAT	1 cut(s)	1375
ErhI	CCWWGG	1 cut(s)	1557
FaeI	CATG	4 cut(s)	224, 578, 1236, 1523
FalI	AAGNNNNNCTT	5 cut(s)	941, 973, 1100, 1132, 1630
FaqI	GGGAC	1 cut(s)	749
FatI	CATG	4 cut(s)	220, 574, 1232, 1519
FauI	CCCGC	1 cut(s)	1628
FblI	GTMKAC	1 cut(s)	579
Fnu4HI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
FokI	GGATG	7 cut(s)	800, 852, 860, 914, 926, 1301, 1382
Fsp4HI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
FspBI	CTAG	2 cut(s)	269, 281
GlaI	GCGC	1 cut(s)	267
GluI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
GsaI	CCCAGC	1 cut(s)	399
HaeIII	GGCC	6 cut(s)	22, 43, 385, 745, 988, 1124
HapII	CCGG	1 cut(s)	382
HhaI	GCGC	1 cut(s)	268
Hin1I	GRCGYC	1 cut(s)	111
Hin1II	CATG	4 cut(s)	224, 578, 1236, 1523
Hin6I	GCGC	1 cut(s)	266
HinP1I	GCGC	1 cut(s)	266
HinfI	GANTC	8 cut(s)	143, 425, 567, 685, 751, 1042, 1214, 1305
HpaII	CCGG	1 cut(s)	382
HphI	GGTGA	4 cut(s)	253, 527, 929, 1594
Hpy166II	GTNNAC	1 cut(s)	580
Hpy188I	TCNGA	1 cut(s)	1035
Hpy8I	GTNNAC	1 cut(s)	580
Hpy99I	CGWCG	2 cut(s)	113, 472
HpyAV	CCTTC	9 cut(s)	8, 146, 637, 830, 1198, 1556, 1579, 1597, 1632
HpyCH4III	ACNGT	5 cut(s)	553, 1028, 1432, 1471, 1577
HpyCH4IV	ACGT	3 cut(s)	111, 522, 1335
HpyCH4V	TGCA	6 cut(s)	322, 680, 1159, 1289, 1373, 1544
HpyF10VI	GCNNNNNNNGC	3 cut(s)	74, 1130, 1280
HpyF3I	CTNAG	5 cut(s)	24, 33, 825, 1275, 1599
HpySE526I	ACGT	3 cut(s)	111, 522, 1335
Hsp92I	GRCGYC	1 cut(s)	111
Hsp92II	CATG	4 cut(s)	224, 578, 1236, 1523
HspAI	GCGC	1 cut(s)	266
Kzo9I	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
LmnI	GCTCC	3 cut(s)	802, 1519, 1535
Lsp1109I	GCAGC	5 cut(s)	77, 1117, 1273, 1295, 1528
LweI	GCATC	4 cut(s)	754, 1323, 1360, 1600
MabI	ACCWGGT	1 cut(s)	964
MaeI	CTAG	2 cut(s)	269, 281
MaeII	ACGT	3 cut(s)	111, 522, 1335
MaeIII	GTNAC	1 cut(s)	1049
MalI	GATC	9 cut(s)	29, 62, 86, 122, 759, 1148, 1388, 1395, 1630
MbiI	CCGCTC	2 cut(s)	742, 1538
MboI	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
MboII	GAAGA	9 cut(s)	87, 649, 652, 824, 920, 994, 1006, 1468, 1619
MflI	RGATCY	4 cut(s)	84, 757, 1146, 1628
MhlI	GDGCHC	1 cut(s)	531
MluCI	AATT	6 cut(s)	438, 486, 615, 807, 1398, 1482
MlyI	GAGTC	3 cut(s)	152, 561, 1299
MmeI	TCCRAC	2 cut(s)	572, 825
Mph1103I	ATGCAT	1 cut(s)	1375
MseI	TTAA	4 cut(s)	300, 485, 492, 1248
MspA1I	CMGCKG	2 cut(s)	728, 1286
MspI	CCGG	1 cut(s)	382
MspR9I	CCNGG	1 cut(s)	966
MvaI	CCWGG	1 cut(s)	966
MwoI	GCNNNNNNNGC	3 cut(s)	74, 1130, 1280
NdeII	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
NlaIII	CATG	4 cut(s)	224, 578, 1236, 1523
NlaIV	GGNNCC	4 cut(s)	653, 927, 963, 1025
NsiI	ATGCAT	1 cut(s)	1375
NspV	TTCGAA	1 cut(s)	150
PagI	TCATGA	1 cut(s)	1519
PaqCI	CACCTGC	2 cut(s)	1343, 1513
PceI	AGGCCT	1 cut(s)	22
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PfeI	GAWTC	5 cut(s)	425, 685, 751, 1042, 1214
PflMI	CCANNNNNTGG	1 cut(s)	971
PkrI	GCNGC	7 cut(s)	67, 744, 1132, 1285, 1288, 1540, 1543
PleI	GAGTC	3 cut(s)	151, 561, 1299
PpsI	GAGTC	3 cut(s)	151, 561, 1299
PsiI	TTATAA	1 cut(s)	1011
Psp6I	CCWGG	1 cut(s)	964
PspFI	CCCAGC	1 cut(s)	395
PspGI	CCWGG	1 cut(s)	964
PspN4I	GGNNCC	4 cut(s)	653, 927, 963, 1025
PspPI	GGNCC	1 cut(s)	449
PstI	CTGCAG	2 cut(s)	1291, 1546
PstNI	CAGNNNCTG	1 cut(s)	767
PsuI	RGATCY	4 cut(s)	84, 757, 1146, 1628
PvuII	CAGCTG	1 cut(s)	1286
RsaI	GTAC	3 cut(s)	185, 377, 521
RsaNI	GTAC	3 cut(s)	184, 376, 520
SaqAI	TTAA	4 cut(s)	300, 485, 492, 1248
SatI	GCNGC	7 cut(s)	66, 743, 1131, 1284, 1287, 1539, 1542
Sau3AI	GATC	9 cut(s)	27, 60, 84, 120, 757, 1146, 1386, 1393, 1628
Sau96I	GGNCC	1 cut(s)	449
SchI	GAGTC	3 cut(s)	152, 561, 1299
ScrFI	CCNGG	1 cut(s)	966
SduI	GDGCHC	1 cut(s)	531
SexAI	ACCWGGT	1 cut(s)	964
SfaNI	GCATC	4 cut(s)	754, 1323, 1360, 1600
SfcI	CTRYAG	3 cut(s)	338, 1287, 1542
SfuI	TTCGAA	1 cut(s)	150
SinI	GGWCC	1 cut(s)	449
SmlI	CTYRAG	3 cut(s)	536, 663, 1309
SmoI	CTYRAG	3 cut(s)	536, 663, 1309
Sse9I	AATT	6 cut(s)	438, 486, 615, 807, 1398, 1482
SseBI	AGGCCT	1 cut(s)	22
SsiI	CCGC	7 cut(s)	171, 728, 742, 1508, 1538, 1569, 1621
SspI	AATATT	2 cut(s)	1329, 1426
SspMI	CTAG	2 cut(s)	269, 281
StuI	AGGCCT	1 cut(s)	22
StyD4I	CCNGG	1 cut(s)	964
StyI	CCWWGG	1 cut(s)	1557
TaaI	ACNGT	5 cut(s)	553, 1028, 1432, 1471, 1577
TaiI	ACGT	3 cut(s)	114, 525, 1338
TaqI	TCGA	3 cut(s)	138, 150, 327
TasI	AATT	6 cut(s)	438, 486, 615, 807, 1398, 1482
TatI	WGTACW	1 cut(s)	183
TauI	GCSGC	2 cut(s)	745, 1541
TfiI	GAWTC	5 cut(s)	425, 685, 751, 1042, 1214
Tru1I	TTAA	4 cut(s)	300, 485, 492, 1248
Tru9I	TTAA	4 cut(s)	300, 485, 492, 1248
TscAI	CASTG	2 cut(s)	37, 1582
TseI	GCWGC	5 cut(s)	65, 1130, 1283, 1286, 1541
TspDTI	ATGAA	6 cut(s)	470, 804, 921, 1007, 1287, 1536
TspRI	CASTG	2 cut(s)	37, 1582
Van91I	CCANNNNNTGG	1 cut(s)	971
VpaK11BI	GGWCC	1 cut(s)	449
XapI	RAATTY	2 cut(s)	615, 1482
XcmI	CCANNNNNNNNNTGG	1 cut(s)	955
XmiI	GTMKAC	1 cut(s)	579
XspI	CTAG	2 cut(s)	269, 281
ZraI	GACGTC	1 cut(s)	112
Zsp2I	ATGCAT	1 cut(s)	1375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.