Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003158

Physical Location & Seq

Genomic Coordinates Forward (+)

60825561 .. 60829242

Gene Structure 3682 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0490000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGCGGTGGTGCAGTACCTGTTGGCCTGGATCTTCGCCTCCGTGTTAGGTCTCATAGCGGTGGTGAAGAGGCGGAGCAACAATCCCCGAGCTTCGCCGGAGGAGACAAGAAGCAGTGTCACCGTCTCAAACGCGGAATGCAGATCGGCTCACGACGACGTAGACGTCATCATCGTCGGAGCCGGTGTTGCCGGCTCTGCTCTGGCTCACACTCTCGGAAAGGATGGACGTCGAGTGCATGTGATTGAACGAGACTTGACAGAGCCAGACCGAATTGTTGGTGAACTATTACAACCTGGAGGCTACCTCAAATTAATTGAGCTGGGACTTGAAGATTGTGTGGAAAAAATTGATGCTCAGAGGGTGTTTGGTTATGCCCTTTTCAAGGATGGGAAAAATACTAGACTCTCTTACCCCTTGGAGAAATTTCACTCAGATGTGTCTGGGAGGAGCTTTCACAATGGCCGTTTCATACAGAGGATGCGAGAGAAAGCGGCAACTCTTCCCAATGTGCAATTGGAGCAAGGAACAGTTACTTCTCTGCTTGAAGAAAAGGGAACAATTAAAGGTGTGCAATACAAGACTAAAACAGGTCAAGAGATGACAGCATATGCCCCTCTTACTATTGTTTGTGATGGCTGTTTCTCTAACTTGCGACGCTCTCTTTGCGATCCTAAGGTGGATGTGCCTTCTTGTTTTGTTGGGTTGGTTCTGGAGAACTGTGATCTTCCACATGCAAATCATGGGCATGTTATCTTAGCAGACCCTTCCCCTATTTTGTTCTATCAGATCAGTAGTACGGAGGTTCGTTGTCTGGTTGATGTACCCGGACAAAAGGTTCCTTCCATTTCAAATGGTGAAATGGCCAAGTATTTGAAGACTGTGGTGGCTTCTCAGATTCCCCCTCAAATTTATGATGCCTTCATAGCTGCAGTTGATAAAGGTAACATCAGGACAATGCCTAACAGAAGCATGCCTGCCGCTCCCTATCCTACTCCTGGAGCCTTATTGATGGGGGATGCATTCAATATGCGCCACCCTCTAACTGGGGGAGGAATGACTGTGGCATTGTCTGATATTGTTGTGCTCCGGGATCTTCTCAGGCCTTTGCGCACCCTAAATGATGCACCTACCCTGTCCAAATATCTTGAATCTTTTTACACTCTGCGGAAGCCAGTTGCATCCACCATAAATACATTGGCAGGGGCCCTTTATAAGGTCTTTTCTTCTTCTCCTGATCAAGCAAGGAAGGAAATGCGCCAGGCTTGCTTTGATTATCTAAGTCTCGGAGGTGTATTCTCTATGGGACCAATCTCTCTACTCTCAGGACTAAACCCTCGCCCCTTGAGTTTGGTTACCCATTTCTTTGCTGTTGCAGTATATGGTGTTGGTCGACTTTTGCTGCCATTCCCATCACCTAAACGCGTTTGGATTGGTGCCAGACTAATTTCTAGTGCCTCGGGAATCATTTACCCCATAATTAAGGCAGAAGGGGTTAGACAAATGTTTTTTCCTGCAACAGTTCCAGCGTATTACAGAACGCCCGTCTCAAGTGAAAAGATGACAAAGAAAGCTGATGGCAGAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005783 GO:0005886 GO:0005911 GO:0009505 GO:0009506 GO:0009507 GO:0009536 GO:0012505 GO:0016020 GO:0030054 GO:0030312 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04141 ko04145 ko04612 ko04918 ko05166 map04141 map04145 map04612 map04918 map05166

Pfam Domains

Protein Families

Calreticulin

Protein Analysis

529

Amino Acids

57.79

Weight (kDa)

9.22

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	53 - 367	2.4e-20	FAD binding domain
SE	PF08491	205 - 477	4.9e-119	Squalene epoxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07340 AT5G07340 AT5G61790
fragaria_vesca	FvH4_4g22170 FvH4_5g09940
malus_domestica	MD00G1076300.v1.1 MD08G1097600.v1.1 MD08G1097700.v1.1 MD13G1134200.v1.1 MD14G1144700.v1.1 MD16G1144800.v1.1
prunus_persica	Prupe.1G211400_v2.0.a1 Prupe.5G139100_v2.0.a1 Prupe.5G139100_v2.0.a1
pyrus_communis	pycom06g11940 pycom13g11700 pycom14g12020 pycom16g11430
rosa_chinensis	RchiOBHm_Chr4g0428401 RchiOBHm_Chr7g0188351
rosa_laevigata	RLG00000004706 RLG00000007154
rosa_multiflora	Rmu_sc0004698.1_g000004 Rmu_sc0008750.1_g000004
rosa_roxburghii	Rroxscaffold_3G00266480 Rroxscaffold_5G00370070
rosa_rugosa	Rorug04G0225200 Rorug06G0490000 Rorug06G0490100
rosa_samantha	Rh4AG282400 Rh4BG288000 Rh4CG303600 Rh4DG285100 Rh7BG096200 Rh7CG096500
rosa_wichuraiana	Rw4G024510 Rw7G008160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1215
AasI	GACNNNNNNGTC	1 cut(s)	164
AatII	GACGTC	2 cut(s)	168, 232
Acc16I	TGCGCA	1 cut(s)	1112
AccB1I	GGYRCC	1 cut(s)	1436
AccBSI	CCGCTC	1 cut(s)	983
AccI	GTMKAC	2 cut(s)	162, 1393
AccII	CGCG	2 cut(s)	134, 1425
AciI	CCGC	7 cut(s)	5, 59, 73, 134, 494, 981, 1168
AclWI	GGATC	3 cut(s)	38, 665, 1101
AcoI	YGGCCR	2 cut(s)	463, 864
AcsI	RAATTY	2 cut(s)	425, 909
AcyI	GRCGYC	2 cut(s)	165, 229
AfaI	GTAC	3 cut(s)	17, 799, 825
AfiI	CCNNNNNNNGG	4 cut(s)	385, 998, 1046, 1216
AflIII	ACRYGT	1 cut(s)	1423
AgsI	TTSAA	8 cut(s)	248, 332, 385, 548, 852, 877, 1027, 1151
AjnI	CCWGG	4 cut(s)	26, 295, 997, 1260
AloI	GAACNNNNNNTCC	2 cut(s)	822, 854
AluBI	AGCT	5 cut(s)	92, 322, 453, 929, 1574
AluI	AGCT	5 cut(s)	92, 322, 453, 929, 1574
Alw21I	GWGCWC	1 cut(s)	1089
Alw26I	GTCTC	6 cut(s)	56, 98, 130, 246, 1289, 1552
AlwI	GGATC	3 cut(s)	38, 665, 1101
AlwNI	CAGNNNCTG	1 cut(s)	19
Ama87I	CYCGRG	2 cut(s)	87, 1459
AoxI	GGCC	5 cut(s)	24, 463, 864, 1103, 1206
ApaI	GGGCCC	1 cut(s)	1210
ApeKI	GCWGC	2 cut(s)	929, 1402
ApoI	RAATTY	2 cut(s)	425, 909
ArsI	GACNNNNNNTTYG	2 cut(s)	648, 680
AseI	ATTAAT	1 cut(s)	314
AspLEI	GCGC	3 cut(s)	1035, 1113, 1260
AspS9I	GGNCC	3 cut(s)	1206, 1207, 1307
AsuC2I	CCSGG	2 cut(s)	828, 1091
AsuHPI	GGTGA	5 cut(s)	76, 112, 293, 869, 1407
AvaI	CYCGRG	2 cut(s)	87, 1459
AvaII	GGWCC	1 cut(s)	1307
AxyI	CCTNAGG	1 cut(s)	675
BaeGI	GKGCMC	1 cut(s)	1210
BalI	TGGCCA	1 cut(s)	866
BanI	GGYRCC	1 cut(s)	1436
BanII	GRGCYC	1 cut(s)	1210
BbsI	GAAGAC	1 cut(s)	884
Bbv12I	GWGCWC	1 cut(s)	1089
BbvI	GCAGC	2 cut(s)	916, 1389
BccI	CCATC	6 cut(s)	218, 383, 629, 1006, 1420, 1571
BceAI	ACGGC	1 cut(s)	450
BciT130I	CCWGG	4 cut(s)	28, 297, 999, 1262
BclI	TGATCA	1 cut(s)	1237
BcnI	CCSGG	2 cut(s)	828, 1091
BcoDI	GTCTC	6 cut(s)	56, 98, 130, 246, 1289, 1552
BfaI	CTAG	2 cut(s)	402, 1452
BfmI	CTRYAG	1 cut(s)	930
BisI	GCNGC	4 cut(s)	495, 930, 981, 1403
BlsI	GCNGC	4 cut(s)	496, 931, 982, 1404
Bme1390I	CCNGG	6 cut(s)	28, 297, 828, 999, 1091, 1262
Bme18I	GGWCC	1 cut(s)	1307
BmeT110I	CYCGRG	2 cut(s)	87, 1459
BmgT120I	GGNCC	3 cut(s)	1206, 1207, 1307
BmiI	GGNNCC	7 cut(s)	181, 840, 1003, 1207, 1208, 1308, 1438
BmrFI	CCNGG	6 cut(s)	28, 297, 828, 999, 1091, 1262
BmrI	ACTGGG	1 cut(s)	1056
BmsI	GCATC	6 cut(s)	343, 471, 907, 1009, 1114, 1190
BmuI	ACTGGG	1 cut(s)	1056
BpiI	GAAGAC	1 cut(s)	884
BplI	GAGNNNNNCTC	2 cut(s)	291, 323
BpmI	CTGGAG	3 cut(s)	318, 734, 1020
BpuEI	CTTGAG	2 cut(s)	1366, 1534
BpuMI	CCSGG	2 cut(s)	828, 1091
BsaHI	GRCGYC	2 cut(s)	165, 229
BsaI	GGTCTC	1 cut(s)	56
BsaJI	CCNNGG	2 cut(s)	417, 1458
BsaXI	ACNNNNNCTCC	2 cut(s)	171, 201
Bsc4I	CCNNNNNNNGG	4 cut(s)	385, 998, 1046, 1216
Bse118I	RCCGGY	2 cut(s)	182, 191
Bse1I	ACTGG	2 cut(s)	1051, 1175
Bse21I	CCTNAGG	1 cut(s)	675
BseBI	CCWGG	4 cut(s)	28, 297, 999, 1262
BseDI	CCNNGG	2 cut(s)	417, 1458
BseGI	GGATG	6 cut(s)	229, 394, 486, 688, 1024, 1181
BseLI	CCNNNNNNNGG	4 cut(s)	385, 998, 1046, 1216
BseMII	CTCAG	5 cut(s)	371, 447, 908, 1114, 1338
BseNI	ACTGG	2 cut(s)	1051, 1175
BseRI	GAGGAG	2 cut(s)	116, 463
BseSI	GKGCMC	1 cut(s)	1210
BseXI	GCAGC	2 cut(s)	916, 1389
BseYI	CCCAGC	1 cut(s)	322
BsgI	GTGCAG	1 cut(s)	32
Bsh1236I	CGCG	2 cut(s)	134, 1425
BshFI	GGCC	5 cut(s)	26, 465, 866, 1105, 1208
BshNI	GGYRCC	1 cut(s)	1436
BsiHKAI	GWGCWC	1 cut(s)	1089
BsiHKCI	CYCGRG	2 cut(s)	87, 1459
BsiSI	CCGG	5 cut(s)	98, 183, 192, 828, 1090
BslFI	GGGAC	2 cut(s)	339, 1320
BslI	CCNNNNNNNGG	4 cut(s)	385, 998, 1046, 1216
BsmAI	GTCTC	6 cut(s)	56, 98, 130, 246, 1289, 1552
BsmBI	CGTCTC	2 cut(s)	130, 1552
BsmFI	GGGAC	2 cut(s)	339, 1320
BsmI	GAATGC	2 cut(s)	143, 1022
BsnI	GGCC	5 cut(s)	26, 465, 866, 1105, 1208
Bso31I	GGTCTC	1 cut(s)	56
BsoBI	CYCGRG	2 cut(s)	87, 1459
Bsp120I	GGGCCC	1 cut(s)	1206
Bsp1286I	GDGCHC	2 cut(s)	1089, 1210
Bsp143I	GATC	7 cut(s)	30, 143, 670, 724, 789, 1093, 1237
BspACI	CCGC	7 cut(s)	5, 59, 73, 134, 494, 981, 1168
BspANI	GGCC	5 cut(s)	26, 465, 866, 1105, 1208
BspCNI	CTCAG	5 cut(s)	370, 446, 907, 1113, 1337
BspFNI	CGCG	2 cut(s)	134, 1425
BspLI	GGNNCC	7 cut(s)	181, 840, 1003, 1207, 1208, 1308, 1438
BspMAI	CTGCAG	1 cut(s)	934
BspPI	GGATC	3 cut(s)	38, 665, 1101
BspT107I	GGYRCC	1 cut(s)	1436
BspTNI	GGTCTC	1 cut(s)	56
BsrBI	CCGCTC	1 cut(s)	983
BsrFI	RCCGGY	2 cut(s)	182, 191
BsrI	ACTGG	2 cut(s)	1051, 1175
BssAI	RCCGGY	2 cut(s)	182, 191
BssECI	CCNNGG	2 cut(s)	417, 1458
BssMI	GATC	7 cut(s)	30, 143, 670, 724, 789, 1093, 1237
BssNI	GRCGYC	2 cut(s)	165, 229
BssT1I	CCWWGG	1 cut(s)	417
Bst2UI	CCWGG	4 cut(s)	28, 297, 999, 1262
Bst4CI	ACNGT	6 cut(s)	124, 532, 722, 883, 1063, 1522
Bst6I	CTCTTC	2 cut(s)	62, 507
BstACI	GRCGYC	2 cut(s)	165, 229
BstC8I	GCNNGC	4 cut(s)	193, 974, 978, 1267
BstDEI	CTNAG	8 cut(s)	357, 433, 675, 757, 894, 1100, 1280, 1324
BstEII	GGTNACC	1 cut(s)	1354
BstENI	CCTNNNNNAGG	2 cut(s)	383, 1214
BstF5I	GGATG	6 cut(s)	229, 394, 486, 688, 1024, 1181
BstFNI	CGCG	2 cut(s)	134, 1425
BstHHI	GCGC	3 cut(s)	1035, 1113, 1260
BstKTI	GATC	7 cut(s)	33, 146, 673, 727, 792, 1096, 1240
BstMAI	GTCTC	6 cut(s)	56, 98, 130, 246, 1289, 1552
BstMBI	GATC	7 cut(s)	30, 143, 670, 724, 789, 1093, 1237
BstMWI	GCNNNNNNNGC	6 cut(s)	188, 197, 520, 666, 926, 1266
BstNI	CCWGG	4 cut(s)	28, 297, 999, 1262
BstNSI	RCATGY	4 cut(s)	242, 737, 752, 976
BstPI	GGTNACC	1 cut(s)	1354
BstSCI	CCNGG	6 cut(s)	26, 295, 826, 997, 1089, 1260
BstSFI	CTRYAG	1 cut(s)	930
BstSLI	GKGCMC	1 cut(s)	1210
BstUI	CGCG	2 cut(s)	134, 1425
BstV1I	GCAGC	2 cut(s)	916, 1389
BstV2I	GAAGAC	1 cut(s)	884
BstX2I	RGATCY	2 cut(s)	30, 1093
BstYI	RGATCY	2 cut(s)	30, 1093
Bsu36I	CCTNAGG	1 cut(s)	675
BsuRI	GGCC	5 cut(s)	26, 465, 866, 1105, 1208
BtsCI	GGATG	6 cut(s)	229, 394, 486, 688, 1024, 1181
BtsI	GCAGTG	1 cut(s)	121
BtsIMutI	CAGTG	1 cut(s)	121
Cac8I	GCNNGC	4 cut(s)	193, 974, 978, 1267
CaiI	CAGNNNCTG	1 cut(s)	19
CfoI	GCGC	3 cut(s)	1035, 1113, 1260
Cfr10I	RCCGGY	2 cut(s)	182, 191
Cfr13I	GGNCC	3 cut(s)	1206, 1207, 1307
CseI	GACGC	1 cut(s)	666
Csp6I	GTAC	3 cut(s)	16, 798, 824
CviAII	CATG	5 cut(s)	239, 734, 743, 749, 973
CviQI	GTAC	3 cut(s)	16, 798, 824
DdeI	CTNAG	8 cut(s)	357, 433, 675, 757, 894, 1100, 1280, 1324
DpnI	GATC	7 cut(s)	32, 145, 672, 726, 791, 1095, 1239
DpnII	GATC	7 cut(s)	30, 143, 670, 724, 789, 1093, 1237
DrdI	GACNNNNNNGTC	1 cut(s)	164
DseDI	GACNNNNNNGTC	1 cut(s)	164
EaeI	YGGCCR	2 cut(s)	463, 864
Eam1104I	CTCTTC	2 cut(s)	62, 507
EarI	CTCTTC	2 cut(s)	62, 507
EciI	GGCGGA	1 cut(s)	88
Eco130I	CCWWGG	1 cut(s)	417
Eco147I	AGGCCT	1 cut(s)	1105
Eco24I	GRGCYC	1 cut(s)	1210
Eco31I	GGTCTC	1 cut(s)	56
Eco47I	GGWCC	1 cut(s)	1307
Eco81I	CCTNAGG	1 cut(s)	675
Eco88I	CYCGRG	2 cut(s)	87, 1459
Eco91I	GGTNACC	1 cut(s)	1354
EcoNI	CCTNNNNNAGG	2 cut(s)	383, 1214
EcoO109I	RGGNCCY	2 cut(s)	1206, 1207
EcoO65I	GGTNACC	1 cut(s)	1354
EcoRII	CCWGG	4 cut(s)	26, 295, 997, 1260
EcoT14I	CCWWGG	1 cut(s)	417
EcoT22I	ATGCAT	1 cut(s)	1024
EcoT38I	GRGCYC	1 cut(s)	1210
ErhI	CCWWGG	1 cut(s)	417
Esp3I	CGTCTC	2 cut(s)	130, 1552
FaeI	CATG	5 cut(s)	242, 737, 746, 752, 976
FaqI	GGGAC	2 cut(s)	339, 1320
FatI	CATG	5 cut(s)	238, 733, 742, 748, 972
FauNDI	CATATG	1 cut(s)	610
FbaI	TGATCA	1 cut(s)	1237
FblI	GTMKAC	2 cut(s)	162, 1393
Fnu4HI	GCNGC	4 cut(s)	495, 930, 981, 1403
FokI	GGATG	6 cut(s)	236, 401, 493, 695, 1031, 1168
FriOI	GRGCYC	1 cut(s)	1210
Fsp4HI	GCNGC	4 cut(s)	495, 930, 981, 1403
FspBI	CTAG	2 cut(s)	402, 1452
FspI	TGCGCA	1 cut(s)	1112
GlaI	GCGC	3 cut(s)	1034, 1112, 1259
GluI	GCNGC	4 cut(s)	495, 930, 981, 1403
GsaI	CCCAGC	1 cut(s)	326
GsuI	CTGGAG	3 cut(s)	318, 734, 1020
HaeIII	GGCC	5 cut(s)	26, 465, 866, 1105, 1208
HapII	CCGG	5 cut(s)	98, 183, 192, 828, 1090
HgaI	GACGC	1 cut(s)	666
HhaI	GCGC	3 cut(s)	1035, 1113, 1260
Hin1I	GRCGYC	2 cut(s)	165, 229
Hin1II	CATG	5 cut(s)	242, 737, 746, 752, 976
Hin6I	GCGC	3 cut(s)	1033, 1111, 1258
HinP1I	GCGC	3 cut(s)	1033, 1111, 1258
HincII	GTYRAC	1 cut(s)	1394
HindII	GTYRAC	1 cut(s)	1394
HinfI	GANTC	4 cut(s)	405, 898, 1151, 1464
HpaII	CCGG	5 cut(s)	98, 183, 192, 828, 1090
HphI	GGTGA	5 cut(s)	76, 112, 293, 869, 1407
Hpy166II	GTNNAC	3 cut(s)	163, 284, 1394
Hpy188I	TCNGA	8 cut(s)	179, 218, 360, 436, 789, 897, 1075, 1289
Hpy188III	TCNNGA	8 cut(s)	152, 596, 713, 952, 1148, 1235, 1326, 1461
Hpy8I	GTNNAC	3 cut(s)	163, 284, 1394
Hpy99I	CGWCG	5 cut(s)	158, 161, 179, 234, 660
HpyAV	CCTTC	6 cut(s)	699, 777, 852, 931, 1243, 1484
HpyCH4III	ACNGT	6 cut(s)	124, 532, 722, 883, 1063, 1522
HpyCH4IV	ACGT	3 cut(s)	159, 165, 229
HpyF10VI	GCNNNNNNNGC	6 cut(s)	188, 197, 520, 666, 926, 1266
HpyF3I	CTNAG	8 cut(s)	357, 433, 675, 757, 894, 1100, 1280, 1324
HpySE526I	ACGT	3 cut(s)	159, 165, 229
Hsp92I	GRCGYC	2 cut(s)	165, 229
Hsp92II	CATG	5 cut(s)	242, 737, 746, 752, 976
HspAI	GCGC	3 cut(s)	1033, 1111, 1258
KroI	GCCGGC	1 cut(s)	191
KroNI	GCCGGC	1 cut(s)	193
Ksp22I	TGATCA	1 cut(s)	1237
Kzo9I	GATC	7 cut(s)	30, 143, 670, 724, 789, 1093, 1237
LmnI	GCTCC	7 cut(s)	75, 179, 450, 520, 988, 1001, 1092
Lsp1109I	GCAGC	2 cut(s)	916, 1389
LweI	GCATC	6 cut(s)	343, 471, 907, 1009, 1114, 1190
MaeI	CTAG	2 cut(s)	402, 1452
MaeII	ACGT	3 cut(s)	159, 165, 229
MaeIII	GTNAC	4 cut(s)	118, 532, 944, 1354
MalI	GATC	7 cut(s)	32, 145, 672, 726, 791, 1095, 1239
MbiI	CCGCTC	1 cut(s)	983
MboI	GATC	7 cut(s)	30, 143, 670, 724, 789, 1093, 1237
MfeI	CAATTG	1 cut(s)	515
MflI	RGATCY	2 cut(s)	30, 1093
MhlI	GDGCHC	2 cut(s)	1089, 1210
MlsI	TGGCCA	1 cut(s)	866
MluI	ACGCGT	1 cut(s)	1423
MluNI	TGGCCA	1 cut(s)	866
MlyI	GAGTC	1 cut(s)	399
MmeI	TCCRAC	1 cut(s)	157
Mox20I	TGGCCA	1 cut(s)	866
Mph1103I	ATGCAT	1 cut(s)	1024
MroNI	GCCGGC	1 cut(s)	191
MscI	TGGCCA	1 cut(s)	866
MseI	TTAA	3 cut(s)	314, 564, 1482
MslI	CAYNNNNRTG	3 cut(s)	59, 435, 747
Msp20I	TGGCCA	1 cut(s)	866
MspI	CCGG	5 cut(s)	98, 183, 192, 828, 1090
MspR9I	CCNGG	6 cut(s)	28, 297, 828, 999, 1091, 1262
MunI	CAATTG	1 cut(s)	515
Mva1269I	GAATGC	2 cut(s)	143, 1022
MvaI	CCWGG	4 cut(s)	28, 297, 999, 1262
MvnI	CGCG	2 cut(s)	134, 1425
MwoI	GCNNNNNNNGC	6 cut(s)	188, 197, 520, 666, 926, 1266
NaeI	GCCGGC	1 cut(s)	193
NciI	CCSGG	2 cut(s)	828, 1091
NdeI	CATATG	1 cut(s)	610
NdeII	GATC	7 cut(s)	30, 143, 670, 724, 789, 1093, 1237
NgoMIV	GCCGGC	1 cut(s)	191
NlaIII	CATG	5 cut(s)	242, 737, 746, 752, 976
NlaIV	GGNNCC	7 cut(s)	181, 840, 1003, 1207, 1208, 1308, 1438
NmuCI	GTSAC	1 cut(s)	118
NsbI	TGCGCA	1 cut(s)	1112
NsiI	ATGCAT	1 cut(s)	1024
NspI	RCATGY	4 cut(s)	242, 737, 752, 976
PaeI	GCATGC	1 cut(s)	976
PceI	AGGCCT	1 cut(s)	1105
PcsI	WCGNNNNNNNCGW	2 cut(s)	162, 171
PctI	GAATGC	2 cut(s)	143, 1022
PdiI	GCCGGC	1 cut(s)	193
PfeI	GAWTC	3 cut(s)	898, 1151, 1464
PfoI	TCCNGGA	2 cut(s)	997, 1089
PkrI	GCNGC	4 cut(s)	496, 931, 982, 1404
PleI	GAGTC	1 cut(s)	399
PpsI	GAGTC	1 cut(s)	399
PshBI	ATTAAT	1 cut(s)	314
PsiI	TTATAA	1 cut(s)	1215
Psp6I	CCWGG	4 cut(s)	26, 295, 997, 1260
PspEI	GGTNACC	1 cut(s)	1354
PspFI	CCCAGC	1 cut(s)	322
PspGI	CCWGG	4 cut(s)	26, 295, 997, 1260
PspN4I	GGNNCC	7 cut(s)	181, 840, 1003, 1207, 1208, 1308, 1438
PspOMI	GGGCCC	1 cut(s)	1206
PspPI	GGNCC	3 cut(s)	1206, 1207, 1307
PstI	CTGCAG	1 cut(s)	934
PstNI	CAGNNNCTG	1 cut(s)	19
PsuI	RGATCY	2 cut(s)	30, 1093
RsaI	GTAC	3 cut(s)	17, 799, 825
RsaNI	GTAC	3 cut(s)	16, 798, 824
RseI	CAYNNNNRTG	3 cut(s)	59, 435, 747
SalI	GTCGAC	1 cut(s)	1392
SaqAI	TTAA	3 cut(s)	314, 564, 1482
SatI	GCNGC	4 cut(s)	495, 930, 981, 1403
Sau3AI	GATC	7 cut(s)	30, 143, 670, 724, 789, 1093, 1237
Sau96I	GGNCC	3 cut(s)	1206, 1207, 1307
SchI	GAGTC	1 cut(s)	399
ScrFI	CCNGG	6 cut(s)	28, 297, 828, 999, 1091, 1262
SduI	GDGCHC	2 cut(s)	1089, 1210
SfaNI	GCATC	6 cut(s)	343, 471, 907, 1009, 1114, 1190
SfcI	CTRYAG	1 cut(s)	930
SinI	GGWCC	1 cut(s)	1307
SmiMI	CAYNNNNRTG	3 cut(s)	59, 435, 747
SmlI	CTYRAG	2 cut(s)	1345, 1549
SmoI	CTYRAG	2 cut(s)	1345, 1549
SphI	GCATGC	1 cut(s)	976
SseBI	AGGCCT	1 cut(s)	1105
SsiI	CCGC	7 cut(s)	5, 59, 73, 134, 494, 981, 1168
SspMI	CTAG	2 cut(s)	402, 1452
StuI	AGGCCT	1 cut(s)	1105
StyD4I	CCNGG	6 cut(s)	26, 295, 826, 997, 1089, 1260
StyI	CCWWGG	1 cut(s)	417
TaaI	ACNGT	6 cut(s)	124, 532, 722, 883, 1063, 1522
TaiI	ACGT	3 cut(s)	162, 168, 232
TaqI	TCGA	2 cut(s)	232, 1393
TaqII	GACCGA	1 cut(s)	285
TauI	GCSGC	2 cut(s)	497, 983
TfiI	GAWTC	3 cut(s)	898, 1151, 1464
Tru1I	TTAA	3 cut(s)	314, 564, 1482
Tru9I	TTAA	3 cut(s)	314, 564, 1482
TscAI	CASTG	1 cut(s)	121
TseFI	GTSAC	1 cut(s)	118
TseI	GCWGC	2 cut(s)	929, 1402
Tsp45I	GTSAC	1 cut(s)	118
TspDTI	ATGAA	2 cut(s)	460, 913
TspGWI	ACGGA	2 cut(s)	31, 815
TspRI	CASTG	1 cut(s)	121
VpaK11BI	GGWCC	1 cut(s)	1307
VspI	ATTAAT	1 cut(s)	314
XagI	CCTNNNNNAGG	2 cut(s)	383, 1214
XapI	RAATTY	2 cut(s)	425, 909
XceI	RCATGY	4 cut(s)	242, 737, 752, 976
XcmI	CCANNNNNNNNNTGG	3 cut(s)	514, 1043, 1195
XmiI	GTMKAC	2 cut(s)	162, 1393
XspI	CTAG	2 cut(s)	402, 1452
ZraI	GACGTC	2 cut(s)	166, 230
Zsp2I	ATGCAT	1 cut(s)	1024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.