Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0002796

Physical Location & Seq

Genomic Coordinates Reverse (-)

14653437 .. 14654563

Gene Structure 1127 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g11590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 507 bp

ATGGCCACCACAACAAACCTACTGCTTACAGACCTCATGTCTGGTGTGAACCATATCCTTTCAAACTACATCAGACCCATCTCCGACCGTCCAAATCTCACTGATTTTCAGGTATCAGATGCCTCCTCCATTCCCCTAATCGATCTCAAGGACCTCCATGGCCCAACGCACTCGGGTATTATCAAACAGATTGGTCTAGCATGCCAGACTGATGGTTTCTTCCAGGTGAAAAACCATGGAGTTCCAGAGATAATGATAAAAAACATGTCGAATATAGCAAGAGAAATTTTCCAATTACCAGAGAGTGAAAGGTTGAAGATGTACTCAGATGACCCTTCTAAGACAACCAGGCTCTCCACCAGTTTCAACGTCAGGACTGAAAAACTGTCCAACTGGAGGGACTTCCTTAGGCTCCATTGCTACCCTCTTCAAGACTATGTCCAAGAATGGCCTAACAATCTCCCATTGTTCAGAGGGAGCAAGTGGGTGAGTACTGCACAAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002229 GO:0002239 GO:0006082 GO:0006725 GO:0006950 GO:0006952 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009056 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009696 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0010150 GO:0010817 GO:0014070 GO:0016054 GO:0016999 GO:0017001 GO:0017144 GO:0018958 GO:0019336 GO:0019439 GO:0019752 GO:0032501 GO:0032502 GO:0032787 GO:0042221 GO:0042445 GO:0042447 GO:0042493 GO:0042537 GO:0042737 GO:0043207 GO:0043436 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0046244 GO:0046395 GO:0046677 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0065007 GO:0065008 GO:0071704 GO:0072329 GO:0090693 GO:0098542 GO:0099402 GO:1901360 GO:1901361 GO:1901575 GO:1901615 GO:1901616 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

169

Amino Acids

19.22

Weight (kDa)

6.96

Isoelectric Point (pI)

40.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DIOX_N	PF14226	44 - 152	1.2e-25	non-haem dioxygenase in morphine synthesis N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10490 AT4G10500
fragaria_vesca	FvH4_5g10430 FvH4_7g17840
malus_domestica	MD01G1090000.v1.1 MD06G1124100.v1.1 MD14G1140400.v1.1 MD14G1140700.v1.1 MD14G1141000.v1.1 MD14G1141200.v1.1
prunus_persica	Prupe.2G199700_v2.0.a1 Prupe.2G200200_v2.0.a1 Prupe.2G200200_v2.0.a1 Prupe.2G200200_v2.0.a1 Prupe.5G134500_v2.0.a1 Prupe.5G134700_v2.0.a1
pyrus_communis	pycom01g11450 pycom06g11450 pycom14g11590
rosa_chinensis	RchiOBHm_Chr1g0361261 RchiOBHm_Chr7g0187801
rosa_laevigata	RLG00000004755 RLG00000027730
rosa_multiflora	Rmu_sc0002119.1_g000038 Rmu_sc0004483.1_g000038
rosa_roxburghii	Rroxscaffold_3G00267060 Rroxscaffold_4G00295120
rosa_rugosa	Rorug01G0287700 Rorug01G0287700 Rorug02G0186700 Rorug06G0484300
rosa_samantha	Rh1AG299000 Rh1BG262900 Rh1CG280300 Rh1DG292900 Rh7CG090300 Rh7DG091900
rosa_wichuraiana	Rw1G026450 Rw7G007720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	285
AfaI	GTAC	2 cut(s)	323, 493
AfiI	CCNNNNNNNGG	1 cut(s)	396
AflIII	ACRYGT	1 cut(s)	264
AgsI	TTSAA	4 cut(s)	63, 316, 367, 431
AhdI	GACNNNNNGTC	1 cut(s)	37
AjnI	CCWGG	2 cut(s)	222, 347
AleI	CACNNNNGTG	1 cut(s)	502
Ama87I	CYCGRG	1 cut(s)	172
AoxI	GGCC	3 cut(s)	3, 160, 449
ApoI	RAATTY	1 cut(s)	285
AspS9I	GGNCC	2 cut(s)	151, 161
AsuHPI	GGTGA	2 cut(s)	238, 499
AvaI	CYCGRG	1 cut(s)	172
AvaII	GGWCC	1 cut(s)	151
AxyI	CCTNAGG	1 cut(s)	407
BalI	TGGCCA	1 cut(s)	5
BccI	CCATC	2 cut(s)	86, 206
BciT130I	CCWGG	2 cut(s)	224, 349
BfaI	CTAG	1 cut(s)	197
BmcAI	AGTACT	1 cut(s)	493
Bme1390I	CCNGG	2 cut(s)	224, 349
Bme18I	GGWCC	1 cut(s)	151
BmeRI	GACNNNNNGTC	1 cut(s)	37
BmeT110I	CYCGRG	1 cut(s)	172
BmgT120I	GGNCC	2 cut(s)	151, 161
BmiI	GGNNCC	1 cut(s)	413
BmrFI	CCNGG	2 cut(s)	224, 349
BmsI	GCATC	1 cut(s)	109
BpmI	CTGGAG	1 cut(s)	415
BpuEI	CTTGAG	1 cut(s)	131
Bsa29I	ATCGAT	1 cut(s)	141
BsaJI	CCNNGG	2 cut(s)	157, 235
Bsc4I	CCNNNNNNNGG	1 cut(s)	396
Bse1I	ACTGG	2 cut(s)	360, 398
Bse21I	CCTNAGG	1 cut(s)	407
Bse3DI	GCAATG	1 cut(s)	415
BseBI	CCWGG	2 cut(s)	224, 349
BseCI	ATCGAT	1 cut(s)	141
BseDI	CCNNGG	2 cut(s)	157, 235
BseLI	CCNNNNNNNGG	1 cut(s)	396
BseMI	GCAATG	1 cut(s)	415
BseMII	CTCAG	1 cut(s)	339
BseNI	ACTGG	2 cut(s)	360, 398
BseRI	GAGGAG	1 cut(s)	115
BsgI	GTGCAG	1 cut(s)	480
Bsh1285I	CGRYCG	1 cut(s)	88
BshFI	GGCC	3 cut(s)	5, 162, 451
BshVI	ATCGAT	1 cut(s)	141
BsiEI	CGRYCG	1 cut(s)	88
BsiHKCI	CYCGRG	1 cut(s)	172
BslFI	GGGAC	1 cut(s)	413
BslI	CCNNNNNNNGG	1 cut(s)	396
BsmFI	GGGAC	1 cut(s)	413
BsnI	GGCC	3 cut(s)	5, 162, 451
BsoBI	CYCGRG	1 cut(s)	172
Bsp143I	GATC	1 cut(s)	142
Bsp19I	CCATGG	2 cut(s)	157, 235
BspANI	GGCC	3 cut(s)	5, 162, 451
BspCNI	CTCAG	1 cut(s)	338
BspDI	ATCGAT	1 cut(s)	141
BspLI	GGNNCC	1 cut(s)	413
BsrDI	GCAATG	1 cut(s)	415
BsrI	ACTGG	2 cut(s)	360, 398
BssECI	CCNNGG	2 cut(s)	157, 235
BssMI	GATC	1 cut(s)	142
BssT1I	CCWWGG	2 cut(s)	157, 235
Bst2UI	CCWGG	2 cut(s)	224, 349
Bst4CI	ACNGT	2 cut(s)	89, 387
Bst6I	CTCTTC	1 cut(s)	432
BstC8I	GCNNGC	1 cut(s)	202
BstDEI	CTNAG	3 cut(s)	325, 339, 407
BstDSI	CCRYGG	2 cut(s)	157, 235
BstKTI	GATC	1 cut(s)	145
BstMBI	GATC	1 cut(s)	142
BstMCI	CGRYCG	1 cut(s)	88
BstNI	CCWGG	2 cut(s)	224, 349
BstNSI	RCATGY	2 cut(s)	204, 268
BstSCI	CCNGG	2 cut(s)	222, 347
BstXI	CCANNNNNNTGG	1 cut(s)	212
Bsu15I	ATCGAT	1 cut(s)	141
Bsu36I	CCTNAGG	1 cut(s)	407
BsuRI	GGCC	3 cut(s)	5, 162, 451
BsuTUI	ATCGAT	1 cut(s)	141
BtgI	CCRYGG	2 cut(s)	157, 235
BtsIMutI	CAGTG	1 cut(s)	99
Cac8I	GCNNGC	1 cut(s)	202
Cfr13I	GGNCC	2 cut(s)	151, 161
ClaI	ATCGAT	1 cut(s)	141
Csp6I	GTAC	2 cut(s)	322, 492
CviAII	CATG	5 cut(s)	37, 158, 201, 236, 265
CviJI	RGCY	5 cut(s)	5, 162, 352, 412, 451
CviKI_1	RGCY	5 cut(s)	5, 162, 352, 412, 451
CviQI	GTAC	2 cut(s)	322, 492
DdeI	CTNAG	3 cut(s)	325, 339, 407
DpnI	GATC	1 cut(s)	144
DpnII	GATC	1 cut(s)	142
DriI	GACNNNNNGTC	1 cut(s)	37
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	432
Eam1105I	GACNNNNNGTC	1 cut(s)	37
EarI	CTCTTC	1 cut(s)	432
Eco130I	CCWWGG	2 cut(s)	157, 235
Eco47I	GGWCC	1 cut(s)	151
Eco81I	CCTNAGG	1 cut(s)	407
Eco88I	CYCGRG	1 cut(s)	172
EcoO109I	RGGNCCY	1 cut(s)	151
EcoRII	CCWGG	2 cut(s)	222, 347
EcoT14I	CCWWGG	2 cut(s)	157, 235
ErhI	CCWWGG	2 cut(s)	157, 235
FaeI	CATG	5 cut(s)	40, 161, 204, 239, 268
FaiI	YATR	8 cut(s)	38, 54, 159, 202, 237, 266, 275, 438
FaqI	GGGAC	1 cut(s)	413
FatI	CATG	5 cut(s)	36, 157, 200, 235, 264
FspBI	CTAG	1 cut(s)	197
GsuI	CTGGAG	1 cut(s)	415
HaeIII	GGCC	3 cut(s)	5, 162, 451
Hin1II	CATG	5 cut(s)	40, 161, 204, 239, 268
HphI	GGTGA	2 cut(s)	238, 499
Hpy166II	GTNNAC	1 cut(s)	49
Hpy188I	TCNGA	5 cut(s)	74, 85, 118, 328, 473
Hpy188III	TCNNGA	3 cut(s)	245, 373, 431
Hpy8I	GTNNAC	1 cut(s)	49
HpyAV	CCTTC	1 cut(s)	345
HpyCH4III	ACNGT	2 cut(s)	89, 387
HpyCH4IV	ACGT	1 cut(s)	369
HpyCH4V	TGCA	1 cut(s)	497
HpyF3I	CTNAG	3 cut(s)	325, 339, 407
HpySE526I	ACGT	1 cut(s)	369
Hsp92II	CATG	5 cut(s)	40, 161, 204, 239, 268
Kzo9I	GATC	1 cut(s)	142
LmnI	GCTCC	2 cut(s)	417, 477
LweI	GCATC	1 cut(s)	109
MaeI	CTAG	1 cut(s)	197
MaeII	ACGT	1 cut(s)	369
MalI	GATC	1 cut(s)	144
MboI	GATC	1 cut(s)	142
MboII	GAAGA	3 cut(s)	211, 328, 419
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	2 cut(s)	285, 293
MluNI	TGGCCA	1 cut(s)	5
MmeI	TCCRAC	2 cut(s)	108, 414
MnlI	CCTC	7 cut(s)	44, 133, 136, 164, 390, 435, 467
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	1 cut(s)	502
Msp20I	TGGCCA	1 cut(s)	5
MspR9I	CCNGG	2 cut(s)	224, 349
MvaI	CCWGG	2 cut(s)	224, 349
NcoI	CCATGG	2 cut(s)	157, 235
NdeII	GATC	1 cut(s)	142
NlaIII	CATG	5 cut(s)	40, 161, 204, 239, 268
NlaIV	GGNNCC	1 cut(s)	413
NspI	RCATGY	2 cut(s)	204, 268
OliI	CACNNNNGTG	1 cut(s)	502
PaeI	GCATGC	1 cut(s)	204
PciI	ACATGT	1 cut(s)	264
PflFI	GACNNNGTC	1 cut(s)	437
PpuMI	RGGWCCY	1 cut(s)	151
PscI	ACATGT	1 cut(s)	264
Psp5II	RGGWCCY	1 cut(s)	151
Psp6I	CCWGG	2 cut(s)	222, 347
PspGI	CCWGG	2 cut(s)	222, 347
PspN4I	GGNNCC	1 cut(s)	413
PspPI	GGNCC	2 cut(s)	151, 161
PspPPI	RGGWCCY	1 cut(s)	151
PsyI	GACNNNGTC	1 cut(s)	437
RsaI	GTAC	2 cut(s)	323, 493
RsaNI	GTAC	2 cut(s)	322, 492
RseI	CAYNNNNRTG	1 cut(s)	502
Sau3AI	GATC	1 cut(s)	142
Sau96I	GGNCC	2 cut(s)	151, 161
ScaI	AGTACT	1 cut(s)	493
ScrFI	CCNGG	2 cut(s)	224, 349
SetI	ASST	7 cut(s)	21, 36, 114, 156, 228, 314, 372
SfaNI	GCATC	1 cut(s)	109
SinI	GGWCC	1 cut(s)	151
SmiMI	CAYNNNNRTG	1 cut(s)	502
SmlI	CTYRAG	1 cut(s)	146
SmoI	CTYRAG	1 cut(s)	146
SphI	GCATGC	1 cut(s)	204
Sse9I	AATT	2 cut(s)	285, 293
SspMI	CTAG	1 cut(s)	197
StyD4I	CCNGG	2 cut(s)	222, 347
StyI	CCWWGG	2 cut(s)	157, 235
TaaI	ACNGT	2 cut(s)	89, 387
TaiI	ACGT	1 cut(s)	372
TaqI	TCGA	2 cut(s)	141, 269
TasI	AATT	2 cut(s)	285, 293
TatI	WGTACW	2 cut(s)	321, 491
TscAI	CASTG	1 cut(s)	106
TspRI	CASTG	1 cut(s)	106
Tth111I	GACNNNGTC	1 cut(s)	437
VpaK11BI	GGWCC	1 cut(s)	151
XapI	RAATTY	1 cut(s)	285
XceI	RCATGY	2 cut(s)	204, 268
XspI	CTAG	1 cut(s)	197
ZrmI	AGTACT	1 cut(s)	493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.