Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003716

Physical Location & Seq

Genomic Coordinates Reverse (-)

34844450 .. 34849246

Gene Structure 4797 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGTCCACCAGTACTCTTGAGATAGAGCCGGCCACAAAACACGACGAAAACGACGTTTCTCCGGTCGAAGAAGTCCGTTTAACGGTCTCAAACGTTGACGATCCCACCCTTCCAGTATGGACCTTCCGAATGTGGACGCTAGGCCTCGCCTCCTGCGCCCTCCTCTCATTCCTCAACACTTTCTTCTCCTACCGCACGGAGCCCCTCATCATCTCGATGATCTCCGTACAGGTGGCGACGCTCCCCATCGGACGGTTCATGGCGAGGGCGCTGCCGAAGCGGAAGTTTCAGATAGGGTCTAAGGAGTTCTCGCTGAACCCTGGTCCGTTTAACATGAAGGAGCACGTGCTGATATCCATATTTGCCAATGCTGGCTCCGGATTCGGAAGTGGAACGGCTTATGCGATTAGCATTGTGGATATAATAAAAGCGTTTTATCATAGAAAGATCTCGTTCTTGGCCAGTTGGATACTTGTTATAACCACGCAGGTATTAGGGTATGGGTGGGCTGGTATTCTCAGAAGGTACGTGGTGGATCCGGCGGAGATGTGGTGGCCGAGTAGTCTCGTTCAAGTCTCCTTGTTCAGGGCTCTACATGAGAAAGACAACAATCGAATGTCAAGAGGGAAGTTCTTTTTCATAGCACTCATATGCAGCTTCGCTTGGTTTGTCGTCCCTGGCTATCTTTTCCCAACCTTGTCAACAATTTCATGGATTTGTTGGATATACCCTAAGTCAGTCACTGCCCAACAAATAGGGTCAGGAATGGGAGGACTTGGCATTGGAGCATTTTCACTTGATTGGACAGTCATAGCCTCCTACCTCTACAGCCCTCTCATCAGCCCTTTCTTTGCCATTGTCAATGTTGCTGCTGGCTATGTTCTTGTTATGTACATGTTACTGCCAATTGCCTATTGGGGTGTCAATTTGTACAATGCCAAGAACTTTGCAATCTTCTCTTCACATTTGTTTGACGCCGGTGGCCAAATATATAATGTCTCCGCCCTTGTGAATAACAAGTTTGAGATTGACATGCCTGCCTATGAAAGACAAGGACGCATAAACTTGAGTGTGTTCTTTTCTTTGACATATGGCATCGGTTTTGCGTCTGTTGTCTCGACCCTCACGCACGTTGCCCTATTCAACGGAAGGGAGATATATAAACAATACAGAAGGGCATCACGGAGTGTAAAGGAGGACATACACACCAGATTAATGAGGAAATACAAGGACATACCTAACTGGTGGTTTCATCTTATGCTTTTGATGTCCCTGGTACTCTCTCTAGTGATGTGCATATTCATGAAAGATCAAGTCCAAATGCCATGGTGGGGACTTATTTTTGCAGCTGGACTTGCATTAGTTTTTACTCTTCCTATAAGCATTATAACCGCCACAACAAATCAGTCTCCAGGACTAAACATCATCACAGAATACATCATGGGATTGATATTACCTGGCAAGCCAATAGCTAATGTGTGCTTCAAAACATATGGATATATAAGCATGTCGCAGGCAATTTCTTTTCTCAATGATTTTAAGCTAGGTCATTACATGAAGATCCCACCTATATCAATGTTCATAGTCCAGTGCATTGGAACAATAGTAGCTGGAACAGTCAATATAGGAGTTGCATGGTGGCTGCTGTCTAGCATTGAAAACATATGTCAAGATCAATTACTCCCTCCCAACAGTCCTTGGACTTGTCCTGGAGACCGTGTCTTCTTTGATGCATCTGTGATTTGGGGCCTTGTCGGACCAAAACGAATCTTTGGCCCTCTCGGAAACTACAAAGCACTCAACTGGTTCTTCCTCATAGGTGCATTGGGACCTCTATTGGTCTGGTTGCTGCACAAAGCTTTCCCAAGTCAGAAGTGGATCAAACTGATCAACCTCCCAGTGCTTTTGGGAGCAACAGCTGCAATGCCACCAGCTACAACTGTGAACTTCAATTGCTGGATTGTGGTTGGAACTATTTTCAACTACTTTGTTTTCAGGTACAGAAAGAAGTGGTGGCAGAGGTACAATTACGTTCTTTCTGCTGCCCTAGATGCTGGAGTGGCTTTCATGGGGGTACTTTTGTACTTTTCTTTGACCATGAACGAGAAGAGCATATCCTGGTGGGGAACAAATGGTGAACACTGTGATTTGGCTACATGCCCCACAGCCAAAGGTATAGTTGTTGATGGTTGCCCTGTCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

735

Amino Acids

82.46

Weight (kDa)

9.22

Isoelectric Point (pI)

32.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	39 - 697	9.4e-189	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09930
fragaria_vesca	FvH4_5g34010 FvH4_5g34011
malus_domestica	MD08G1206700.v1.1 MD15G1390200.v1.1 MD15G1390400.v1.1
prunus_persica	Prupe.1G539200_v2.0.a1 Prupe.1G539300_v2.0.a1
pyrus_communis	pycom15g34950 pycom15g34960
rosa_chinensis	RchiOBHm_Chr7g0233451 RchiOBHm_Chr7g0233471
rosa_laevigata	RLG00000001268 RLG00000001269
rosa_multiflora	Rmu_sc0000029.1_g000038 Rmu_sc0000029.1_g000051
rosa_roxburghii	Rroxscaffold_3G00227270 Rroxscaffold_3G00227290
rosa_rugosa	Rorug07G0280800 Rorug07G0280800
rosa_samantha	Rh7AG436600 Rh7AG436700 Rh7BG409700 Rh7BG409800 Rh7CG456500 Rh7CG456700 Rh7DG425800 Rh7DG425900
rosa_wichuraiana	Rw0G008530 Rw0G022500 Rw7G036000 Rw7G036010 Rw7G036030 Rw7G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	479, 1388
Acc36I	ACCTGC	1 cut(s)	478
AccI	GTMKAC	1 cut(s)	2199
AccIII	TCCGGA	1 cut(s)	377
AciI	CCGC	5 cut(s)	193, 280, 542, 1002, 1392
AclI	AACGTT	1 cut(s)	93
AclWI	GGATC	5 cut(s)	95, 530, 543, 1555, 1886
AcoI	YGGCCR	4 cut(s)	30, 459, 554, 982
AcvI	CACGTG	1 cut(s)	346
AcyI	GRCGYC	1 cut(s)	975
AdeI	CACNNNGTG	1 cut(s)	1187
AfiI	CCNNNNNNNGG	4 cut(s)	82, 252, 585, 1331
AflIII	ACRYGT	1 cut(s)	894
AgsI	TTSAA	6 cut(s)	572, 1144, 1486, 1658, 1951, 1981
AjnI	CCWGG	7 cut(s)	319, 676, 1272, 1411, 1456, 1708, 2117
AluBI	AGCT	8 cut(s)	657, 1349, 1472, 1543, 1610, 1859, 1919, 1934
AluI	AGCT	8 cut(s)	657, 1349, 1472, 1543, 1610, 1859, 1919, 1934
Alw21I	GWGCWC	1 cut(s)	345
Alw26I	GTCTC	7 cut(s)	91, 569, 580, 1003, 1120, 1413, 1707
AlwI	GGATC	5 cut(s)	95, 530, 543, 1555, 1886
AlwNI	CAGNNNCTG	1 cut(s)	743
Aor13HI	TCCGGA	1 cut(s)	377
AoxI	GGCC	7 cut(s)	30, 142, 459, 554, 982, 1747, 1774
ApeKI	GCWGC	8 cut(s)	271, 654, 869, 1346, 1642, 1849, 1919, 2042
AseI	ATTAAT	1 cut(s)	1214
AspLEI	GCGC	2 cut(s)	158, 271
AspS9I	GGNCC	6 cut(s)	120, 323, 1747, 1757, 1775, 1829
AsuHPI	GGTGA	1 cut(s)	2147
AvaII	GGWCC	4 cut(s)	120, 323, 1757, 1829
BaeI	ACNNNNGTAYC	2 cut(s)	2066, 2099
BalI	TGGCCA	2 cut(s)	461, 984
BamHI	GGATCC	1 cut(s)	535
BanII	GRGCYC	2 cut(s)	204, 592
BbrPI	CACGTG	1 cut(s)	346
BbsI	GAAGAC	1 cut(s)	1714
Bbv12I	GWGCWC	1 cut(s)	345
BbvI	GCAGC	8 cut(s)	258, 666, 856, 1358, 1629, 1836, 1906, 2029
BccI	CCATC	2 cut(s)	254, 2180
BceAI	ACGGC	1 cut(s)	411
BcgI	CGANNNNNNTGC	2 cut(s)	253, 287
BciT130I	CCWGG	7 cut(s)	321, 678, 1274, 1413, 1458, 1710, 2119
BciVI	GTATCC	1 cut(s)	462
BclI	TGATCA	1 cut(s)	1887
BcoDI	GTCTC	7 cut(s)	91, 569, 580, 1003, 1120, 1413, 1707
BfaI	CTAG	5 cut(s)	140, 1286, 1544, 1650, 2048
BfmI	CTRYAG	1 cut(s)	826
BfoI	RGCGCY	1 cut(s)	272
BfuAI	ACCTGC	1 cut(s)	478
BfuI	GTATCC	1 cut(s)	462
BglII	AGATCT	1 cut(s)	447
BisI	GCNGC	8 cut(s)	272, 655, 870, 1347, 1643, 1850, 1920, 2043
BlsI	GCNGC	8 cut(s)	273, 656, 871, 1348, 1644, 1851, 1921, 2044
BmcAI	AGTACT	1 cut(s)	13
Bme1390I	CCNGG	7 cut(s)	321, 678, 1274, 1413, 1458, 1710, 2119
Bme18I	GGWCC	4 cut(s)	120, 323, 1757, 1829
BmgT120I	GGNCC	6 cut(s)	120, 323, 1747, 1757, 1775, 1829
BmiI	GGNNCC	5 cut(s)	201, 376, 537, 1748, 1830
BmrFI	CCNGG	7 cut(s)	321, 678, 1274, 1413, 1458, 1710, 2119
BmrI	ACTGGG	1 cut(s)	1892
BmsI	GCATC	5 cut(s)	1104, 1187, 1720, 1742, 2041
BmuI	ACTGGG	1 cut(s)	1892
BpiI	GAAGAC	1 cut(s)	1714
BpmI	CTGGAG	3 cut(s)	1395, 1731, 2076
BpuEI	CTTGAG	2 cut(s)	38, 1087
BsaAI	YACGTR	2 cut(s)	346, 529
BsaHI	GRCGYC	1 cut(s)	975
BsaI	GGTCTC	2 cut(s)	91, 1707
BsaJI	CCNNGG	5 cut(s)	319, 676, 1272, 1325, 1697
BsaWI	WCCGGW	2 cut(s)	61, 377
BsaXI	ACNNNNNCTCC	4 cut(s)	536, 566, 1704, 1734
Bsc4I	CCNNNNNNNGG	4 cut(s)	82, 252, 585, 1331
Bse118I	RCCGGY	2 cut(s)	28, 977
Bse1I	ACTGG	7 cut(s)	9, 113, 462, 1247, 1588, 1808, 1898
Bse3DI	GCAATG	1 cut(s)	1929
BseAI	TCCGGA	1 cut(s)	377
BseBI	CCWGG	7 cut(s)	321, 678, 1274, 1413, 1458, 1710, 2119
BseDI	CCNNGG	5 cut(s)	319, 676, 1272, 1325, 1697
BseLI	CCNNNNNNNGG	4 cut(s)	82, 252, 585, 1331
BseMI	GCAATG	1 cut(s)	1929
BseMII	CTCAG	1 cut(s)	532
BseNI	ACTGG	7 cut(s)	9, 113, 462, 1247, 1588, 1808, 1898
BseRI	GAGGAG	1 cut(s)	152
BseXI	GCAGC	8 cut(s)	258, 666, 856, 1358, 1629, 1836, 1906, 2029
BsgI	GTGCAG	1 cut(s)	1835
Bsh1285I	CGRYCG	1 cut(s)	66
BshFI	GGCC	7 cut(s)	32, 144, 461, 556, 984, 1749, 1776
BsiEI	CGRYCG	1 cut(s)	66
BsiHKAI	GWGCWC	1 cut(s)	345
BsiSI	CCGG	5 cut(s)	29, 62, 378, 539, 978
BslFI	GGGAC	4 cut(s)	659, 1255, 1347, 1842
BslI	CCNNNNNNNGG	4 cut(s)	82, 252, 585, 1331
BsmAI	GTCTC	7 cut(s)	91, 569, 580, 1003, 1120, 1413, 1707
BsmFI	GGGAC	4 cut(s)	659, 1255, 1347, 1842
BsnI	GGCC	7 cut(s)	32, 144, 461, 556, 984, 1749, 1776
Bso31I	GGTCTC	2 cut(s)	91, 1707
Bsp1286I	GDGCHC	3 cut(s)	204, 345, 592
Bsp13I	TCCGGA	1 cut(s)	377
Bsp1407I	TGTACA	2 cut(s)	891, 930
Bsp143I	GATC	9 cut(s)	100, 219, 447, 535, 1309, 1560, 1672, 1878, 1887
Bsp19I	CCATGG	1 cut(s)	1325
BspACI	CCGC	5 cut(s)	193, 280, 542, 1002, 1392
BspANI	GGCC	7 cut(s)	32, 144, 461, 556, 984, 1749, 1776
BspCNI	CTCAG	1 cut(s)	531
BspEI	TCCGGA	1 cut(s)	377
BspHI	TCATGA	1 cut(s)	1302
BspLI	GGNNCC	5 cut(s)	201, 376, 537, 1748, 1830
BspMI	ACCTGC	1 cut(s)	478
BspPI	GGATC	5 cut(s)	95, 530, 543, 1555, 1886
BspQI	GCTCTTC	1 cut(s)	2102
BspTNI	GGTCTC	2 cut(s)	91, 1707
BsrDI	GCAATG	1 cut(s)	1929
BsrFI	RCCGGY	2 cut(s)	28, 977
BsrGI	TGTACA	2 cut(s)	891, 930
BsrI	ACTGG	7 cut(s)	9, 113, 462, 1247, 1588, 1808, 1898
BssAI	RCCGGY	2 cut(s)	28, 977
BssECI	CCNNGG	5 cut(s)	319, 676, 1272, 1325, 1697
BssMI	GATC	9 cut(s)	100, 219, 447, 535, 1309, 1560, 1672, 1878, 1887
BssNI	GRCGYC	1 cut(s)	975
BssT1I	CCWWGG	2 cut(s)	1325, 1697
Bst2UI	CCWGG	7 cut(s)	321, 678, 1274, 1413, 1458, 1710, 2119
Bst4CI	ACNGT	8 cut(s)	85, 255, 808, 1618, 1694, 1718, 1942, 2144
Bst6I	CTCTTC	3 cut(s)	964, 1377, 2102
BstACI	GRCGYC	1 cut(s)	975
BstAPI	GCANNNNNTGC	1 cut(s)	1919
BstAUI	TGTACA	2 cut(s)	891, 930
BstBAI	YACGTR	2 cut(s)	346, 529
BstC8I	GCNNGC	6 cut(s)	30, 373, 874, 1038, 1463, 1515
BstDEI	CTNAG	3 cut(s)	300, 518, 732
BstDSI	CCRYGG	1 cut(s)	1325
BstENI	CCTNNNNNAGG	1 cut(s)	583
BstH2I	RGCGCY	1 cut(s)	272
BstHHI	GCGC	2 cut(s)	158, 271
BstKTI	GATC	9 cut(s)	103, 222, 450, 538, 1312, 1563, 1675, 1881, 1890
BstMAI	GTCTC	7 cut(s)	91, 569, 580, 1003, 1120, 1413, 1707
BstMBI	GATC	9 cut(s)	100, 219, 447, 535, 1309, 1560, 1672, 1878, 1887
BstMCI	CGRYCG	1 cut(s)	66
BstMWI	GCNNNNNNNGC	6 cut(s)	155, 277, 1355, 1919, 2051, 2060
BstNI	CCWGG	7 cut(s)	321, 678, 1274, 1413, 1458, 1710, 2119
BstNSI	RCATGY	4 cut(s)	898, 1036, 1510, 2160
BstSCI	CCNGG	7 cut(s)	319, 676, 1272, 1411, 1456, 1708, 2117
BstSFI	CTRYAG	1 cut(s)	826
BstV1I	GCAGC	8 cut(s)	258, 666, 856, 1358, 1629, 1836, 1906, 2029
BstV2I	GAAGAC	1 cut(s)	1714
BstX2I	RGATCY	3 cut(s)	447, 535, 1560
BstXI	CCANNNNNNTGG	1 cut(s)	1595
BstYI	RGATCY	3 cut(s)	447, 535, 1560
BsuI	GTATCC	1 cut(s)	462
BsuRI	GGCC	7 cut(s)	32, 144, 461, 556, 984, 1749, 1776
BtgI	CCRYGG	1 cut(s)	1325
BtsI	GCAGTG	1 cut(s)	741
BtsIMutI	CAGTG	4 cut(s)	741, 1595, 1905, 2140
BveI	ACCTGC	1 cut(s)	478
Cac8I	GCNNGC	6 cut(s)	30, 373, 874, 1038, 1463, 1515
CaiI	CAGNNNCTG	1 cut(s)	743
CciI	TCATGA	1 cut(s)	1302
CfoI	GCGC	2 cut(s)	158, 271
Cfr10I	RCCGGY	2 cut(s)	28, 977
Cfr13I	GGNCC	6 cut(s)	120, 323, 1747, 1757, 1775, 1829
CseI	GACGC	5 cut(s)	145, 247, 983, 1065, 1095
DdeI	CTNAG	3 cut(s)	300, 518, 732
DpnI	GATC	9 cut(s)	102, 221, 449, 537, 1311, 1562, 1674, 1880, 1889
DpnII	GATC	9 cut(s)	100, 219, 447, 535, 1309, 1560, 1672, 1878, 1887
DraIII	CACNNNGTG	1 cut(s)	1187
EaeI	YGGCCR	4 cut(s)	30, 459, 554, 982
Eam1104I	CTCTTC	3 cut(s)	964, 1377, 2102
EarI	CTCTTC	3 cut(s)	964, 1377, 2102
EciI	GGCGGA	2 cut(s)	557, 991
Eco130I	CCWWGG	2 cut(s)	1325, 1697
Eco147I	AGGCCT	1 cut(s)	144
Eco24I	GRGCYC	2 cut(s)	204, 592
Eco31I	GGTCTC	2 cut(s)	91, 1707
Eco32I	GATATC	1 cut(s)	354
Eco47I	GGWCC	4 cut(s)	120, 323, 1757, 1829
Eco72I	CACGTG	1 cut(s)	346
EcoNI	CCTNNNNNAGG	1 cut(s)	583
EcoO109I	RGGNCCY	2 cut(s)	1747, 1829
EcoRII	CCWGG	7 cut(s)	319, 676, 1272, 1411, 1456, 1708, 2117
EcoRV	GATATC	1 cut(s)	354
EcoT14I	CCWWGG	2 cut(s)	1325, 1697
EcoT22I	ATGCAT	1 cut(s)	1735
EcoT38I	GRGCYC	2 cut(s)	204, 592
ErhI	CCWWGG	2 cut(s)	1325, 1697
FaqI	GGGAC	4 cut(s)	659, 1255, 1347, 1842
FauNDI	CATATG	4 cut(s)	650, 1090, 1492, 1664
FbaI	TGATCA	1 cut(s)	1887
FblI	GTMKAC	1 cut(s)	2199
Fnu4HI	GCNGC	8 cut(s)	272, 655, 870, 1347, 1643, 1850, 1920, 2043
FriOI	GRGCYC	2 cut(s)	204, 592
Fsp4HI	GCNGC	8 cut(s)	272, 655, 870, 1347, 1643, 1850, 1920, 2043
FspBI	CTAG	5 cut(s)	140, 1286, 1544, 1650, 2048
GlaI	GCGC	2 cut(s)	157, 270
GluI	GCNGC	8 cut(s)	272, 655, 870, 1347, 1643, 1850, 1920, 2043
GsuI	CTGGAG	3 cut(s)	1395, 1731, 2076
HaeII	RGCGCY	1 cut(s)	272
HaeIII	GGCC	7 cut(s)	32, 144, 461, 556, 984, 1749, 1776
HapII	CCGG	5 cut(s)	29, 62, 378, 539, 978
HgaI	GACGC	5 cut(s)	145, 247, 983, 1065, 1095
HhaI	GCGC	2 cut(s)	158, 271
Hin1I	GRCGYC	1 cut(s)	975
Hin6I	GCGC	2 cut(s)	156, 269
HinP1I	GCGC	2 cut(s)	156, 269
HincII	GTYRAC	2 cut(s)	97, 702
HindII	GTYRAC	2 cut(s)	97, 702
HindIII	AAGCTT	1 cut(s)	1857
HinfI	GANTC	2 cut(s)	381, 1767
HpaII	CCGG	5 cut(s)	29, 62, 378, 539, 978
HphI	GGTGA	1 cut(s)	2147
Hpy166II	GTNNAC	7 cut(s)	6, 97, 135, 702, 1945, 2138, 2200
Hpy188I	TCNGA	8 cut(s)	128, 251, 291, 386, 521, 1757, 1784, 1872
Hpy188III	TCNNGA	8 cut(s)	17, 214, 378, 621, 762, 1117, 1303, 1670
Hpy8I	GTNNAC	7 cut(s)	6, 97, 135, 702, 1945, 2138, 2200
Hpy99I	CGWCG	3 cut(s)	47, 56, 241
HpyAV	CCTTC	6 cut(s)	119, 133, 331, 516, 1143, 1167
HpyCH4III	ACNGT	8 cut(s)	85, 255, 808, 1618, 1694, 1718, 1942, 2144
HpyCH4IV	ACGT	6 cut(s)	54, 93, 345, 528, 1131, 2031
HpyF10VI	GCNNNNNNNGC	6 cut(s)	155, 277, 1355, 1919, 2051, 2060
HpyF3I	CTNAG	3 cut(s)	300, 518, 732
HpySE526I	ACGT	6 cut(s)	54, 93, 345, 528, 1131, 2031
Hsp92I	GRCGYC	1 cut(s)	975
HspAI	GCGC	2 cut(s)	156, 269
Kpn2I	TCCGGA	1 cut(s)	377
KroI	GCCGGC	1 cut(s)	28
KroNI	GCCGGC	1 cut(s)	30
Ksp22I	TGATCA	1 cut(s)	1887
Kzo9I	GATC	9 cut(s)	100, 219, 447, 535, 1309, 1560, 1672, 1878, 1887
LguI	GCTCTTC	1 cut(s)	2102
LmnI	GCTCC	6 cut(s)	199, 246, 340, 380, 785, 1910
Lsp1109I	GCAGC	8 cut(s)	258, 666, 856, 1358, 1629, 1836, 1906, 2029
LweI	GCATC	5 cut(s)	1104, 1187, 1720, 1742, 2041
MaeI	CTAG	5 cut(s)	140, 1286, 1544, 1650, 2048
MaeII	ACGT	6 cut(s)	54, 93, 345, 528, 1131, 2031
MaeIII	GTNAC	2 cut(s)	739, 897
MalI	GATC	9 cut(s)	102, 221, 449, 537, 1311, 1562, 1674, 1880, 1889
MboI	GATC	9 cut(s)	100, 219, 447, 535, 1309, 1560, 1672, 1878, 1887
MboII	GAAGA	9 cut(s)	80, 175, 946, 951, 1364, 1570, 1714, 1801, 2119
MfeI	CAATTG	2 cut(s)	906, 1951
MflI	RGATCY	3 cut(s)	447, 535, 1560
MhlI	GDGCHC	3 cut(s)	204, 345, 592
MlsI	TGGCCA	2 cut(s)	461, 984
MluCI	AATT	7 cut(s)	705, 906, 925, 1518, 1676, 1951, 2026
MluNI	TGGCCA	2 cut(s)	461, 984
MmeI	TCCRAC	4 cut(s)	446, 701, 1735, 1948
Mox20I	TGGCCA	2 cut(s)	461, 984
Mph1103I	ATGCAT	1 cut(s)	1735
MroI	TCCGGA	1 cut(s)	377
MroNI	GCCGGC	1 cut(s)	28
MscI	TGGCCA	2 cut(s)	461, 984
MseI	TTAA	4 cut(s)	80, 330, 1214, 1539
MslI	CAYNNNNRTG	3 cut(s)	215, 649, 1301
Msp20I	TGGCCA	2 cut(s)	461, 984
MspA1I	CMGCKG	2 cut(s)	1349, 1919
MspI	CCGG	5 cut(s)	29, 62, 378, 539, 978
MspR9I	CCNGG	7 cut(s)	321, 678, 1274, 1413, 1458, 1710, 2119
MunI	CAATTG	2 cut(s)	906, 1951
MvaI	CCWGG	7 cut(s)	321, 678, 1274, 1413, 1458, 1710, 2119
MwoI	GCNNNNNNNGC	6 cut(s)	155, 277, 1355, 1919, 2051, 2060
NaeI	GCCGGC	1 cut(s)	30
NcoI	CCATGG	1 cut(s)	1325
NdeI	CATATG	4 cut(s)	650, 1090, 1492, 1664
NdeII	GATC	9 cut(s)	100, 219, 447, 535, 1309, 1560, 1672, 1878, 1887
NgoMIV	GCCGGC	1 cut(s)	28
NlaIV	GGNNCC	5 cut(s)	201, 376, 537, 1748, 1830
NmeAIII	GCCGAG	1 cut(s)	582
NmuCI	GTSAC	1 cut(s)	739
NsiI	ATGCAT	1 cut(s)	1735
NspI	RCATGY	4 cut(s)	898, 1036, 1510, 2160
PagI	TCATGA	1 cut(s)	1302
PceI	AGGCCT	1 cut(s)	144
PciI	ACATGT	1 cut(s)	894
PciSI	GCTCTTC	1 cut(s)	2102
PcsI	WCGNNNNNNNCGW	3 cut(s)	48, 51, 401
PdiI	GCCGGC	1 cut(s)	30
PfeI	GAWTC	2 cut(s)	381, 1767
PflFI	GACNNNGTC	1 cut(s)	1718
PfoI	TCCNGGA	2 cut(s)	1411, 1708
PkrI	GCNGC	8 cut(s)	273, 656, 871, 1348, 1644, 1851, 1921, 2044
PmaCI	CACGTG	1 cut(s)	346
PmlI	CACGTG	1 cut(s)	346
Ppu21I	YACGTR	2 cut(s)	346, 529
PpuMI	RGGWCCY	1 cut(s)	1829
PscI	ACATGT	1 cut(s)	894
PshBI	ATTAAT	1 cut(s)	1214
PsiI	TTATAA	2 cut(s)	479, 1388
Psp1406I	AACGTT	1 cut(s)	93
Psp5II	RGGWCCY	1 cut(s)	1829
Psp6I	CCWGG	7 cut(s)	319, 676, 1272, 1411, 1456, 1708, 2117
PspCI	CACGTG	1 cut(s)	346
PspGI	CCWGG	7 cut(s)	319, 676, 1272, 1411, 1456, 1708, 2117
PspN4I	GGNNCC	5 cut(s)	201, 376, 537, 1748, 1830
PspPI	GGNCC	6 cut(s)	120, 323, 1747, 1757, 1775, 1829
PspPPI	RGGWCCY	1 cut(s)	1829
PstNI	CAGNNNCTG	1 cut(s)	743
PsuI	RGATCY	3 cut(s)	447, 535, 1560
PsyI	GACNNNGTC	1 cut(s)	1718
PvuII	CAGCTG	2 cut(s)	1349, 1919
RseI	CAYNNNNRTG	3 cut(s)	215, 649, 1301
SapI	GCTCTTC	1 cut(s)	2102
SaqAI	TTAA	4 cut(s)	80, 330, 1214, 1539
SatI	GCNGC	8 cut(s)	272, 655, 870, 1347, 1643, 1850, 1920, 2043
Sau3AI	GATC	9 cut(s)	100, 219, 447, 535, 1309, 1560, 1672, 1878, 1887
Sau96I	GGNCC	6 cut(s)	120, 323, 1747, 1757, 1775, 1829
ScaI	AGTACT	1 cut(s)	13
ScrFI	CCNGG	7 cut(s)	321, 678, 1274, 1413, 1458, 1710, 2119
SduI	GDGCHC	3 cut(s)	204, 345, 592
SfaNI	GCATC	5 cut(s)	1104, 1187, 1720, 1742, 2041
SfcI	CTRYAG	1 cut(s)	826
SgrAI	CRCCGGYG	1 cut(s)	977
SinI	GGWCC	4 cut(s)	120, 323, 1757, 1829
SmiMI	CAYNNNNRTG	3 cut(s)	215, 649, 1301
SmlI	CTYRAG	2 cut(s)	17, 1066
SmoI	CTYRAG	2 cut(s)	17, 1066
Sse9I	AATT	7 cut(s)	705, 906, 925, 1518, 1676, 1951, 2026
SseBI	AGGCCT	1 cut(s)	144
SsiI	CCGC	5 cut(s)	193, 280, 542, 1002, 1392
SspMI	CTAG	5 cut(s)	140, 1286, 1544, 1650, 2048
StuI	AGGCCT	1 cut(s)	144
StyD4I	CCNGG	7 cut(s)	319, 676, 1272, 1411, 1456, 1708, 2117
StyI	CCWWGG	2 cut(s)	1325, 1697
TaaI	ACNGT	8 cut(s)	85, 255, 808, 1618, 1694, 1718, 1942, 2144
TaiI	ACGT	6 cut(s)	57, 96, 348, 531, 1134, 2034
TaqI	TCGA	4 cut(s)	66, 215, 613, 1118
TasI	AATT	7 cut(s)	705, 906, 925, 1518, 1676, 1951, 2026
TatI	WGTACW	4 cut(s)	11, 891, 930, 2082
TfiI	GAWTC	2 cut(s)	381, 1767
Tru1I	TTAA	4 cut(s)	80, 330, 1214, 1539
Tru9I	TTAA	4 cut(s)	80, 330, 1214, 1539
TscAI	CASTG	4 cut(s)	748, 1595, 1905, 2147
TseFI	GTSAC	1 cut(s)	739
TseI	GCWGC	8 cut(s)	271, 654, 869, 1346, 1642, 1849, 1919, 2042
Tsp45I	GTSAC	1 cut(s)	739
TspGWI	ACGGA	6 cut(s)	65, 212, 214, 315, 1161, 1198
TspRI	CASTG	4 cut(s)	748, 1595, 1905, 2147
Tth111I	GACNNNGTC	1 cut(s)	1718
VpaK11BI	GGWCC	4 cut(s)	120, 323, 1757, 1829
VspI	ATTAAT	1 cut(s)	1214
XagI	CCTNNNNNAGG	1 cut(s)	583
XceI	RCATGY	4 cut(s)	898, 1036, 1510, 2160
XcmI	CCANNNNNNNNNTGG	2 cut(s)	912, 1872
XmiI	GTMKAC	1 cut(s)	2199
XspI	CTAG	5 cut(s)	140, 1286, 1544, 1650, 2048
ZrmI	AGTACT	1 cut(s)	13
Zsp2I	ATGCAT	1 cut(s)	1735

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.