pycom16g13770

phospholipase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
9829910 .. 9837536
7627 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3327 bp
ATGGAATCGGATCAGTTAATCTCGGGCGGCGGGTCTCGCTACCTCCAAATGCGATCGGAGTCGGCCATGTCGCCCTCCTCCTTTTTCTGCCGTCTTTCGTCCTTCGAGCCCGCTCGGATTTTCGATGAGTTGCCGAGCGCCACCATCGTCTCCGTCTCCCGTCCCGACGCCGGCGATATTAGCCCCGTGCTTCTCTCTTACACCATCGAGTTCCAATACAAGCAGTTTAAGTGGCGATTAGTGAAGAAACCGTCACATGTATTCTACTTGCATTTCGCATTGAAGAAACGTGCATTTTTCGAGGAAATTCAGGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGATCACACAGATGTGGTGCATGATCATGAGGATGATGAGACTGTTCCCCTGCAGCACGATGAAAGTGCTAAAAACAGAGATGTTCCATCTAGCGCCGCTCTTCCAATCATCCGGCCAGCGCTGGGTAGGGATCAATCCATTGCGGAGAGATCAAAGGTTGCAATGCAAGGGTATCTAAATCACTTTCTTGGAAACATGGACATTGTGAACTCTCGAGAGGTCTGCAAGTTCTTGGAGGTCTCGATGTTATCATTTTCTCCAGAATATGGCCCTAAGCTAAAAGAAGACTATGTGATGGTGAAGCATCTTCCAAAAATTCTTAAGGATGATAGTACCAGGAAATGTTGTGCATGTGGTTGGTTTAATTGCTGTAATGACAATTGGCAAAAGGTTTGGGCTGTATTAAAACCAGGATTCTTGGCCTTGCTGGCGCATCCTTTTGATACCCAACCTTTGGATATAATAGTATTTGATGTACTACCAGCCTCAGATGGAAATGGGGATGGCCGGGTATCACTGGCAAAAGAAATAAAAGAGCGGAATCCTTTACGTCATGCATTTAAGGTGGCTTGTGGAAACCGGAGCATTAATTTGAGAGTTAAGAGTAGTGCCAAAGTAAAAGATTGGGTCGCCTCAATCAATGATGCTGGACTCAGGCCTCCAGAGGGCTGGTGTCATCCTCACCGCTTTGGCTCTTTTGCACCTCCGAGAGGTTTGACTGAAGATGGTAGTCGGGTTCAATGGTTTATAGATGGTCAGTCAGCATTTGAAGCTATTGCGTCTGCAATTGAGGATGCAAAATCAGAGATATTTATTTGTGGCTGGTGGCTGTGTCCAGAATTGTACCTGCGGCGTCCATTTCATGCTCATGCTTCTTCTAGACTTGATTCCTTGCTGGAAGCAAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTATAAAGAGGTAGCTCTTGCTCTGAAAATCAACAGTGTTTATAGCAAGAGAAAACTGCTTGGGATTCATGAGAATGTGAGAGTACTACGTTATCCTGACCACTTTTCAAGTGGTGTTTACTTATGGTCGCACCATGAAAAACTTGTCATTGTTGATTACCAGATTTGCTTTCTTGGAGGACTGGATTTATGCTTTGGTCGTTACGATACTGCTGAGCATAAAGTGGGTGATTGTCCTCCTTCGATATGGCCTGGAAAGGACTATTACAACCCGAGGGAATCTGAACCAAATTCGTGGGAGGATACAATGAAAGATGAGTTGGATCGTGGAAAATATCCTCGTATGCCTTGGCATGACGTTCACTGTGCCCTTTGGGGACCACCTTGCCGAGACGTGGCTAGACATTTTGTTCAGCGCTGGAACTATGCAAAGAGAAATAAGGCTCCAAACGAACAAGCAATTCCACTACTTATGCCGCAGCACCACATGGTCATTCCTCATTACATGGGAAGAAGCCAAGAGATGGAGATTGAAAGTAAGAATGCTAATAATCACAAAGAGCATAAAAGGACAGATTCCTTGTCGTCGATATCATCCTGTCAAGATATTCCGCTTCTTATACCCCAAGAAGCTGATGGGCTGGATTGTCCAAATGAAGACACAAAACTAGGTGTGACAGACTCTCCTCATGATCTCCTTTATCAGCCAAGCTGGGTTAGCAACAATCTTGCTTTCCCTTTCCGGAAGTTAAAAATTGCACCAGTGGGTCCTGATATGCCAATGAGAGGCTTTGTAGATGACCTTGATTCTCTGGCTCGACATGGAAAAATGGCTTCTGACGGGGTGGCACAGCCTGGCATGAAGGATCCAGACTGGTGGGAAACACAAGAAAGGGGCAACAAGGGTGGTTTCACAGATGAATCAGGACAAGTTGGCCCTTGTTGCTCATGTCGATGCCAGGTTATTAGAAGTGTCAGTCAGTGGTCAGCAGGAACAAGCCAAGTTGAAGAGAGCATTCACAATGCTTATTGCTCACTAATCGATAAGTCCGAACACTTCATTTACATTGAGAATCAATTTTTTATATCAGGTCTTTCAGGAGATGAAATTATACGGAATCGTGTTTTAGAAGCTTTATTTCGACGTATTATGCGAGCATACAATGATAAGAAGCCTTTTAGAGTTATAATTGTCATTCCGCTCATACCCGGCTTCCAGGGAGGTATGGATGATGCTGGTGCAGCATCTGTGAGAGCTGTTATGCATTGGCAATATCGAACCATTTGCAGAGGACAGAATTCAATATTGCACAATCTTAATGAAATTCTTGGTCCAAAGATGCATGATTACATTTCCTTCTATGGCCTTAGATCATATGGTAAACTCTATGAAGGTGGTCCTGTGGCCTGTAGTCAGGTCTATGTGCATAGTAAAATCATGATTGTCGATGATTGCACAACTTTAATTGGATCAGCTAACATCAATGATAGGAGTTTGCTTGGTTCAAGAGACTCTGAGATTGGTCTACTGATTGAAGATAAAGAGATGATTAATTCAGTTATGGGAGGAAAGCCATGGAAGGCTGGAAAGTTTTCATTGAGTCTTCGCTTGTCACTGTGGTCTGAACACCTTGGTATTCGTGCTACGGAGATGAGTCAAATACTCGACCCAATTGTTGATTCAACTTACAAGGACATCTGGATGGCAACTGCAAAGACAAATACCGCAATCTACCAAGATGTGTTTTCTTGCATACCAAACGATTTTATACAGTCCAGAGCTGCGTTCAGGCAAAGCATGGCCTGCTGGAAGGAGAGAATTGGACACACAACTATCGACTTGGGAATTGGTCCTGACCAGATAGAATCATTTCAAAATGGAGATGTGAAGAGAGCAAATCCCATGGAGAGGTTAGTCTCTGTGAAGGGCCATCTTGTTTGTTTCCCTTTGGATTTCATGTTGAAAGAAGATCTGAGACCTGTGTTCAACGAGAGCGAGTATTACGCGTCTCCTCAAGTTTTTCATTGA

Protein Analysis

1109

Amino Acids

125.71

Weight (kDa)

6.38

Isoelectric Point (pI)

49.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLDc PF00614 473 - 500 3.9e-06 Phospholipase D Active site motif
PLDc_2 PF13091 891 - 951 2.8e-08 PLD-like domain
PLDc PF00614 908 - 931 2.5e-06 Phospholipase D Active site motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2486
Acc36I ACCTGC 1 cut(s) 1215
AccB7I CCANNNNNTGG 3 cut(s) 626, 814, 1822
AccBSI CCGCTC 4 cut(s) 113, 458, 898, 2500
AccI GTMKAC 1 cut(s) 2824
AccII CGCG 1 cut(s) 3305
AccIII TCCGGA 1 cut(s) 2040
AclWI GGATC 6 cut(s) 18, 498, 1629, 2159, 2172, 2776
AcoI YGGCCR 3 cut(s) 63, 473, 865
AcsI RAATTY 5 cut(s) 306, 675, 1588, 2596, 2622
AcuI CTGAAG 1 cut(s) 1101
AcyI GRCGYC 2 cut(s) 168, 1213
AfaI GTAC 4 cut(s) 694, 837, 1205, 1383
AfeI AGCGCT 2 cut(s) 480, 1715
AflII CTTAAG 1 cut(s) 680
AflIII ACRYGT 2 cut(s) 256, 3303
AjiI CACGTC 1 cut(s) 1693
AjnI CCWGG 6 cut(s) 695, 769, 1549, 2152, 2256, 2514
AjuI GAANNNNNNNTTGG 4 cut(s) 1601, 1633, 2962, 2994
AleI CACNNNNGTG 1 cut(s) 371
AlwI GGATC 6 cut(s) 18, 498, 1629, 2159, 2172, 2776
AlwNI CAGNNNCTG 1 cut(s) 2546
Ama87I CYCGRG 3 cut(s) 22, 573, 1570
Aor13HI TCCGGA 1 cut(s) 2040
Aor51HI AGCGCT 2 cut(s) 480, 1715
ApeKI GCWGC 4 cut(s) 412, 1777, 2540, 3080
ApoI RAATTY 5 cut(s) 306, 675, 1588, 2596, 2622
AseI ATTAAT 2 cut(s) 948, 2850
Asp700I GAANNNNTTC 4 cut(s) 339, 1278, 2890, 3168
AspLEI GCGC 5 cut(s) 140, 455, 481, 793, 1716
AspS9I GGNCC 8 cut(s) 629, 1676, 2066, 2234, 2630, 2696, 3149, 3226
AsuC2I CCSGG 2 cut(s) 869, 2508
AsuHPI GGTGA 3 cut(s) 670, 1034, 1538
AvaI CYCGRG 3 cut(s) 22, 573, 1570
AvaII GGWCC 5 cut(s) 1676, 2066, 2630, 2696, 3149
BaeGI GKGCMC 1 cut(s) 1669
BamHI GGATCC 1 cut(s) 2164
BanII GRGCYC 1 cut(s) 111
BbsI GAAGAC 3 cut(s) 651, 1962, 2894
BbvI GCAGC 4 cut(s) 424, 1789, 2552, 3067
BceAI ACGGC 1 cut(s) 75
BcgI CGANNNNNNTGC 6 cut(s) 407, 441, 564, 598, 2565, 2599
BciT130I CCWGG 6 cut(s) 697, 771, 1551, 2154, 2258, 2516
BciVI GTATCC 1 cut(s) 1594
BclI TGATCA 1 cut(s) 382
BcnI CCSGG 2 cut(s) 869, 2508
BfaI CTAG 5 cut(s) 350, 450, 1239, 1698, 1967
BfmI CTRYAG 2 cut(s) 410, 2707
BfoI RGCGCY 4 cut(s) 141, 456, 482, 1717
BfrI CTTAAG 1 cut(s) 680
BfuAI ACCTGC 1 cut(s) 1215
BfuI GTATCC 1 cut(s) 1594
BglI GCCNNNNNGGC 1 cut(s) 788
BglII AGATCT 1 cut(s) 3268
BisI GCNGC 8 cut(s) 28, 413, 456, 1211, 1775, 1778, 2541, 3081
BlpI GCTNAGC 1 cut(s) 1512
BlsI GCNGC 8 cut(s) 29, 414, 457, 1212, 1776, 1779, 2542, 3082
BmcAI AGTACT 1 cut(s) 1383
Bme1390I CCNGG 8 cut(s) 697, 771, 869, 1551, 2154, 2258, 2508, 2516
Bme18I GGWCC 5 cut(s) 1676, 2066, 2630, 2696, 3149
BmeT110I CYCGRG 3 cut(s) 22, 573, 1570
BmgBI CACGTC 1 cut(s) 1693
BmgT120I GGNCC 8 cut(s) 629, 1676, 2066, 2234, 2630, 2696, 3149, 3226
BmiI GGNNCC 4 cut(s) 1677, 1743, 2067, 2166
BmrFI CCNGG 8 cut(s) 697, 771, 869, 1551, 2154, 2258, 2508, 2516
BmsI GCATC 8 cut(s) 673, 802, 994, 1144, 2243, 2521, 2552, 2628
BpiI GAAGAC 3 cut(s) 651, 1962, 2894
BpmI CTGGAG 2 cut(s) 603, 1005
Bpu10I CCTNAGC 2 cut(s) 633, 1269
Bpu1102I GCTNAGC 1 cut(s) 1512
BpuEI CTTGAG 1 cut(s) 3297
BpuMI CCSGG 2 cut(s) 869, 2508
Bsa29I ATCGAT 1 cut(s) 2340
BsaHI GRCGYC 2 cut(s) 168, 1213
BsaI GGTCTC 3 cut(s) 39, 604, 3268
BsaJI CCNNGG 6 cut(s) 1571, 1646, 2515, 2873, 2929, 3201
BsaWI WCCGGW 2 cut(s) 939, 2040
BsaXI ACNNNNNCTCC 2 cut(s) 1966, 1996
Bse118I RCCGGY 1 cut(s) 170
Bse1I ACTGG 4 cut(s) 882, 1485, 2060, 2177
Bse3DI GCAATG 2 cut(s) 498, 528
BseAI TCCGGA 1 cut(s) 2040
BseBI CCWGG 6 cut(s) 697, 771, 1551, 2154, 2258, 2516
BseCI ATCGAT 1 cut(s) 2340
BseDI CCNNGG 6 cut(s) 1571, 1646, 2515, 2873, 2929, 3201
BseMI GCAATG 2 cut(s) 498, 528
BseMII CTCAG 5 cut(s) 861, 1027, 1503, 2805, 3263
BseNI ACTGG 4 cut(s) 882, 1485, 2060, 2177
BseRI GAGGAG 3 cut(s) 67, 1974, 3300
BseSI GKGCMC 1 cut(s) 1669
BseXI GCAGC 4 cut(s) 424, 1789, 2552, 3067
BseYI CCCAGC 2 cut(s) 481, 2010
BsgI GTGCAG 1 cut(s) 2559
Bsh1236I CGCG 1 cut(s) 3305
Bsh1285I CGRYCG 1 cut(s) 56
BshVI ATCGAT 1 cut(s) 2340
BsiEI CGRYCG 1 cut(s) 56
BsiHKCI CYCGRG 3 cut(s) 22, 573, 1570
BsiSI CCGG 6 cut(s) 171, 472, 868, 940, 2041, 2508
BslFI GGGAC 2 cut(s) 147, 1689
BsmBI CGTCTC 4 cut(s) 154, 160, 1683, 3312
BsmFI GGGAC 2 cut(s) 147, 1689
BsmI GAATGC 2 cut(s) 1846, 2313
Bso31I GGTCTC 3 cut(s) 39, 604, 3268
BsoBI CYCGRG 3 cut(s) 22, 573, 1570
Bsp1286I GDGCHC 2 cut(s) 111, 1669
Bsp13I TCCGGA 1 cut(s) 2040
Bsp1720I GCTNAGC 1 cut(s) 1512
Bsp19I CCATGG 2 cut(s) 2873, 3201
BspCNI CTCAG 5 cut(s) 860, 1026, 1504, 2806, 3264
BspDI ATCGAT 1 cut(s) 2340
BspEI TCCGGA 1 cut(s) 2040
BspFNI CGCG 1 cut(s) 3305
BspHI TCATGA 4 cut(s) 385, 1366, 1987, 2736
BspLI GGNNCC 4 cut(s) 1677, 1743, 2067, 2166
BspMAI CTGCAG 1 cut(s) 414
BspMI ACCTGC 1 cut(s) 1215
BspPI GGATC 6 cut(s) 18, 498, 1629, 2159, 2172, 2776
BspQI GCTCTTC 1 cut(s) 465
BspTI CTTAAG 1 cut(s) 680
BspTNI GGTCTC 3 cut(s) 39, 604, 3268
BsrBI CCGCTC 4 cut(s) 113, 458, 898, 2500
BsrDI GCAATG 2 cut(s) 498, 528
BsrFI RCCGGY 1 cut(s) 170
BsrI ACTGG 4 cut(s) 882, 1485, 2060, 2177
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 6 cut(s) 1571, 1646, 2515, 2873, 2929, 3201
BssNI GRCGYC 2 cut(s) 168, 1213
BssT1I CCWWGG 4 cut(s) 1646, 2873, 2929, 3201
Bst2UI CCWGG 6 cut(s) 697, 771, 1551, 2154, 2258, 2516
Bst4CI ACNGT 6 cut(s) 252, 403, 1334, 1664, 2916, 3072
Bst6I CTCTTC 3 cut(s) 465, 2301, 3182
BstACI GRCGYC 2 cut(s) 168, 1213
BstAFI CTTAAG 1 cut(s) 680
BstAPI GCANNNNNTGC 1 cut(s) 3102
BstC8I GCNNGC 6 cut(s) 111, 172, 477, 789, 2454, 3103
BstDEI CTNAG 8 cut(s) 633, 847, 1013, 1269, 1512, 2666, 2814, 3272
BstDSI CCRYGG 2 cut(s) 2873, 3201
BstENI CCTNNNNNAGG 1 cut(s) 1068
BstFNI CGCG 1 cut(s) 3305
BstH2I RGCGCY 4 cut(s) 141, 456, 482, 1717
BstHHI GCGC 5 cut(s) 140, 455, 481, 793, 1716
BstMCI CGRYCG 1 cut(s) 56
BstMWI GCNNNNNNNGC 8 cut(s) 36, 180, 788, 1130, 2016, 2241, 2540, 3102
BstNI CCWGG 6 cut(s) 697, 771, 1551, 2154, 2258, 2516
BstNSI RCATGY 2 cut(s) 260, 714
BstSCI CCNGG 8 cut(s) 695, 769, 867, 1549, 2152, 2256, 2506, 2514
BstSFI CTRYAG 2 cut(s) 410, 2707
BstSLI GKGCMC 1 cut(s) 1669
BstUI CGCG 1 cut(s) 3305
BstV1I GCAGC 4 cut(s) 424, 1789, 2552, 3067
BstV2I GAAGAC 3 cut(s) 651, 1962, 2894
BstX2I RGATCY 2 cut(s) 2164, 3268
BstXI CCANNNNNNTGG 3 cut(s) 1029, 1593, 2175
BstYI RGATCY 2 cut(s) 2164, 3268
Bsu15I ATCGAT 1 cut(s) 2340
BsuI GTATCC 1 cut(s) 1594
BsuTUI ATCGAT 1 cut(s) 2340
BtgI CCRYGG 2 cut(s) 2873, 3201
BtrI CACGTC 1 cut(s) 1693
BtsIMutI CAGTG 6 cut(s) 875, 1339, 1660, 2067, 2285, 2912
BveI ACCTGC 1 cut(s) 1215
Cac8I GCNNGC 6 cut(s) 111, 172, 477, 789, 2454, 3103
CaiI CAGNNNCTG 1 cut(s) 2546
CciI TCATGA 4 cut(s) 385, 1366, 1987, 2736
CfoI GCGC 5 cut(s) 140, 455, 481, 793, 1716
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 8 cut(s) 629, 1676, 2066, 2234, 2630, 2696, 3149, 3226
ClaI ATCGAT 1 cut(s) 2340
CseI GACGC 4 cut(s) 176, 1128, 1202, 3294
Csp6I GTAC 4 cut(s) 693, 836, 1204, 1382
CspCI CAANNNNNGTGG 2 cut(s) 2185, 2220
CviQI GTAC 4 cut(s) 693, 836, 1204, 1382
DdeI CTNAG 8 cut(s) 633, 847, 1013, 1269, 1512, 2666, 2814, 3272
EaeI YGGCCR 3 cut(s) 63, 473, 865
Eam1104I CTCTTC 3 cut(s) 465, 2301, 3182
EarI CTCTTC 3 cut(s) 465, 2301, 3182
Eco130I CCWWGG 4 cut(s) 1646, 2873, 2929, 3201
Eco147I AGGCCT 1 cut(s) 1018
Eco24I GRGCYC 1 cut(s) 111
Eco31I GGTCTC 3 cut(s) 39, 604, 3268
Eco32I GATATC 1 cut(s) 1890
Eco47I GGWCC 5 cut(s) 1676, 2066, 2630, 2696, 3149
Eco47III AGCGCT 2 cut(s) 480, 1715
Eco57I CTGAAG 1 cut(s) 1101
Eco88I CYCGRG 3 cut(s) 22, 573, 1570
EcoNI CCTNNNNNAGG 1 cut(s) 1068
EcoO109I RGGNCCY 1 cut(s) 2066
EcoRI GAATTC 1 cut(s) 2596
EcoRII CCWGG 6 cut(s) 695, 769, 1549, 2152, 2256, 2514
EcoRV GATATC 1 cut(s) 1890
EcoT14I CCWWGG 4 cut(s) 1646, 2873, 2929, 3201
EcoT22I ATGCAT 3 cut(s) 919, 2565, 2643
EcoT38I GRGCYC 1 cut(s) 111
ErhI CCWWGG 4 cut(s) 1646, 2873, 2929, 3201
Esp3I CGTCTC 4 cut(s) 154, 160, 1683, 3312
FalI AAGNNNNNCTT 2 cut(s) 324, 356
FaqI GGGAC 2 cut(s) 147, 1689
FauI CCCGC 2 cut(s) 23, 118
FauNDI CATATG 1 cut(s) 2674
FbaI TGATCA 1 cut(s) 382
FblI GTMKAC 1 cut(s) 2824
Fnu4HI GCNGC 8 cut(s) 28, 413, 456, 1211, 1775, 1778, 2541, 3081
FriOI GRGCYC 1 cut(s) 111
Fsp4HI GCNGC 8 cut(s) 28, 413, 456, 1211, 1775, 1778, 2541, 3081
FspBI CTAG 5 cut(s) 350, 450, 1239, 1698, 1967
GlaI GCGC 5 cut(s) 139, 454, 480, 792, 1715
GluI GCNGC 8 cut(s) 28, 413, 456, 1211, 1775, 1778, 2541, 3081
GsaI CCCAGC 2 cut(s) 485, 2014
GsuI CTGGAG 2 cut(s) 603, 1005
HaeII RGCGCY 4 cut(s) 141, 456, 482, 1717
HapII CCGG 6 cut(s) 171, 472, 868, 940, 2041, 2508
HgaI GACGC 4 cut(s) 176, 1128, 1202, 3294
HhaI GCGC 5 cut(s) 140, 455, 481, 793, 1716
Hin1I GRCGYC 2 cut(s) 168, 1213
Hin6I GCGC 5 cut(s) 138, 453, 479, 791, 1714
HinP1I GCGC 5 cut(s) 138, 453, 479, 791, 1714
HindIII AAGCTT 1 cut(s) 2430
HpaII CCGG 6 cut(s) 171, 472, 868, 940, 2041, 2508
HphI GGTGA 3 cut(s) 670, 1034, 1538
Hpy166II GTNNAC 5 cut(s) 568, 1417, 1660, 2681, 2825
Hpy8I GTNNAC 5 cut(s) 568, 1417, 1660, 2681, 2825
Hpy99I CGWCG 3 cut(s) 170, 1888, 2445
HpyAV CCTTC 9 cut(s) 112, 1268, 1548, 2155, 2665, 2684, 2872, 3103, 3217
HpyCH4III ACNGT 6 cut(s) 252, 403, 1334, 1664, 2916, 3072
HpyCH4IV ACGT 6 cut(s) 289, 910, 1387, 1656, 1692, 2443
HpyF10VI GCNNNNNNNGC 8 cut(s) 36, 180, 788, 1130, 2016, 2241, 2540, 3102
HpyF3I CTNAG 8 cut(s) 633, 847, 1013, 1269, 1512, 2666, 2814, 3272
HpySE526I ACGT 6 cut(s) 289, 910, 1387, 1656, 1692, 2443
Hsp92I GRCGYC 2 cut(s) 168, 1213
HspAI GCGC 5 cut(s) 138, 453, 479, 791, 1714
Kpn2I TCCGGA 1 cut(s) 2040
KroI GCCGGC 1 cut(s) 170
KroNI GCCGGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 382
LguI GCTCTTC 1 cut(s) 465
LmnI GCTCC 2 cut(s) 942, 1747
Lsp1109I GCAGC 4 cut(s) 424, 1789, 2552, 3067
LweI GCATC 8 cut(s) 673, 802, 994, 1144, 2243, 2521, 2552, 2628
MaeI CTAG 5 cut(s) 350, 450, 1239, 1698, 1967
MaeII ACGT 6 cut(s) 289, 910, 1387, 1656, 1692, 2443
MaeIII GTNAC 4 cut(s) 252, 1499, 1972, 2910
MbiI CCGCTC 4 cut(s) 113, 458, 898, 2500
MfeI CAATTG 3 cut(s) 739, 1146, 2970
MflI RGATCY 2 cut(s) 2164, 3268
MhlI GDGCHC 2 cut(s) 111, 1669
MluI ACGCGT 1 cut(s) 3303
MlyI GAGTC 6 cut(s) 68, 1005, 1973, 2804, 2908, 2962
MmeI TCCRAC 1 cut(s) 1599
Mph1103I ATGCAT 3 cut(s) 919, 2565, 2643
MreI CGCCGGCG 1 cut(s) 170
MroI TCCGGA 1 cut(s) 2040
MroNI GCCGGC 1 cut(s) 170
MroXI GAANNNNTTC 4 cut(s) 339, 1278, 2890, 3168
MslI CAYNNNNRTG 8 cut(s) 369, 371, 384, 390, 1227, 1371, 2251, 2999
MspCI CTTAAG 1 cut(s) 680
MspI CCGG 6 cut(s) 171, 472, 868, 940, 2041, 2508
MspR9I CCNGG 8 cut(s) 697, 771, 869, 1551, 2154, 2258, 2508, 2516
MunI CAATTG 3 cut(s) 739, 1146, 2970
Mva1269I GAATGC 2 cut(s) 1846, 2313
MvaI CCWGG 6 cut(s) 697, 771, 1551, 2154, 2258, 2516
MvnI CGCG 1 cut(s) 3305
MwoI GCNNNNNNNGC 8 cut(s) 36, 180, 788, 1130, 2016, 2241, 2540, 3102
NaeI GCCGGC 1 cut(s) 172
NciI CCSGG 2 cut(s) 869, 2508
NcoI CCATGG 2 cut(s) 2873, 3201
NdeI CATATG 1 cut(s) 2674
NgoMIV GCCGGC 1 cut(s) 170
NlaIV GGNNCC 4 cut(s) 1677, 1743, 2067, 2166
NmeAIII GCCGAG 2 cut(s) 159, 1712
NmuCI GTSAC 3 cut(s) 252, 1972, 2910
NsiI ATGCAT 3 cut(s) 919, 2565, 2643
NspI RCATGY 2 cut(s) 260, 714
OliI CACNNNNGTG 1 cut(s) 371
PaeR7I CTCGAG 1 cut(s) 573
PagI TCATGA 4 cut(s) 385, 1366, 1987, 2736
PceI AGGCCT 1 cut(s) 1018
PciI ACATGT 1 cut(s) 256
PciSI GCTCTTC 1 cut(s) 465
PcsI WCGNNNNNNNCGW 2 cut(s) 2346, 2449
PctI GAATGC 2 cut(s) 1846, 2313
PdiI GCCGGC 1 cut(s) 172
PdmI GAANNNNTTC 4 cut(s) 339, 1278, 2890, 3168
PflMI CCANNNNNTGG 3 cut(s) 626, 814, 1822
PkrI GCNGC 8 cut(s) 29, 414, 457, 1212, 1776, 1779, 2542, 3082
Ple19I CGATCG 1 cut(s) 56
PleI GAGTC 6 cut(s) 67, 1005, 1973, 2804, 2907, 2961
PpsI GAGTC 6 cut(s) 67, 1005, 1973, 2804, 2907, 2961
PpuMI RGGWCCY 1 cut(s) 2066
PscI ACATGT 1 cut(s) 256
PshBI ATTAAT 2 cut(s) 948, 2850
PsiI TTATAA 1 cut(s) 2486
Psp5II RGGWCCY 1 cut(s) 2066
Psp6I CCWGG 6 cut(s) 695, 769, 1549, 2152, 2256, 2514
PspFI CCCAGC 2 cut(s) 481, 2010
PspGI CCWGG 6 cut(s) 695, 769, 1549, 2152, 2256, 2514
PspN4I GGNNCC 4 cut(s) 1677, 1743, 2067, 2166
PspPI GGNCC 8 cut(s) 629, 1676, 2066, 2234, 2630, 2696, 3149, 3226
PspPPI RGGWCCY 1 cut(s) 2066
PstI CTGCAG 1 cut(s) 414
PstNI CAGNNNCTG 1 cut(s) 2546
PsuI RGATCY 2 cut(s) 2164, 3268
PvuI CGATCG 1 cut(s) 56
RsaI GTAC 4 cut(s) 694, 837, 1205, 1383
RsaNI GTAC 4 cut(s) 693, 836, 1204, 1382
RseI CAYNNNNRTG 8 cut(s) 369, 371, 384, 390, 1227, 1371, 2251, 2999
SapI GCTCTTC 1 cut(s) 465
SatI GCNGC 8 cut(s) 28, 413, 456, 1211, 1775, 1778, 2541, 3081
Sau96I GGNCC 8 cut(s) 629, 1676, 2066, 2234, 2630, 2696, 3149, 3226
ScaI AGTACT 1 cut(s) 1383
SchI GAGTC 6 cut(s) 68, 1005, 1973, 2804, 2908, 2962
ScrFI CCNGG 8 cut(s) 697, 771, 869, 1551, 2154, 2258, 2508, 2516
SduI GDGCHC 2 cut(s) 111, 1669
SfaNI GCATC 8 cut(s) 673, 802, 994, 1144, 2243, 2521, 2552, 2628
SfcI CTRYAG 2 cut(s) 410, 2707
Sfr274I CTCGAG 1 cut(s) 573
SgrAI CRCCGGYG 1 cut(s) 170
SinI GGWCC 5 cut(s) 1676, 2066, 2630, 2696, 3149
SlaI CTCGAG 1 cut(s) 573
SmiMI CAYNNNNRTG 8 cut(s) 369, 371, 384, 390, 1227, 1371, 2251, 2999
SmlI CTYRAG 3 cut(s) 573, 680, 3312
SmoI CTYRAG 3 cut(s) 573, 680, 3312
SseBI AGGCCT 1 cut(s) 1018
SspI AATATT 1 cut(s) 2604
SspMI CTAG 5 cut(s) 350, 450, 1239, 1698, 1967
StuI AGGCCT 1 cut(s) 1018
StyD4I CCNGG 8 cut(s) 695, 769, 867, 1549, 2152, 2256, 2506, 2514
StyI CCWWGG 4 cut(s) 1646, 2873, 2929, 3201
TaaI ACNGT 6 cut(s) 252, 403, 1334, 1664, 2916, 3072
TaiI ACGT 6 cut(s) 292, 913, 1390, 1659, 1695, 2446
TatI WGTACW 2 cut(s) 835, 1381
TauI GCSGC 4 cut(s) 30, 458, 1213, 1777
TscAI CASTG 6 cut(s) 882, 1339, 1667, 2067, 2285, 2919
TseFI GTSAC 3 cut(s) 252, 1972, 2910
TseI GCWGC 4 cut(s) 412, 1777, 2540, 3080
Tsp45I GTSAC 3 cut(s) 252, 1972, 2910
TspGWI ACGGA 3 cut(s) 142, 2428, 2960
TspRI CASTG 6 cut(s) 882, 1339, 1667, 2067, 2285, 2919
Van91I CCANNNNNTGG 3 cut(s) 626, 814, 1822
Vha464I CTTAAG 1 cut(s) 680
VpaK11BI GGWCC 5 cut(s) 1676, 2066, 2630, 2696, 3149
VspI ATTAAT 2 cut(s) 948, 2850
XagI CCTNNNNNAGG 1 cut(s) 1068
XapI RAATTY 5 cut(s) 306, 675, 1588, 2596, 2622
XbaI TCTAGA 1 cut(s) 1238
XceI RCATGY 2 cut(s) 260, 714
XcmI CCANNNNNNNNNTGG 2 cut(s) 1406, 1931
XhoI CTCGAG 1 cut(s) 573
XmiI GTMKAC 1 cut(s) 2824
XmnI GAANNNNTTC 4 cut(s) 339, 1278, 2890, 3168
XspI CTAG 5 cut(s) 350, 450, 1239, 1698, 1967
ZrmI AGTACT 1 cut(s) 1383
Zsp2I ATGCAT 3 cut(s) 919, 2565, 2643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.