pycom420g00500

magnesium transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_420
Physical Location & Seq
Reverse (-)
582780 .. 586177
3398 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom420g00500.1

Sequence Viewer

Length: 1380 bp
ATGGGGAAGGGTCCCTTCTCTTTCAAGCGCAGCAGCAGCATCCGCCGCCGCCCCCCCAAGAAGTTCATTGGCCCTCCCCCTTCCCCTTTTCCCTCGCCGCCGCAGCCGTTTCGATCTCCTCCCCTCTCCAATGTCCATATCAACAGTACCAATACCAACAACAATAATAATAATCTGAACGCGGTTGTTGCTGGCGGCGGTGGCGTGAAGGGGAAGAAGAAGGCCGGAGGAGCCAGGCTTTGGATGCGGTTTGACCGCTTTGGCGGATCAGAGCTCGTCGAGTGTGACAAAAATGCTATTATTCGACGCGCTGCCATTCCCGCCCGGGACTTGAGGATTCTCGGCCCTGTCTTCTCCCATTCCTCCAGCATCCTTGCTAGGGAGAAGGCCATGGTGGTTAATTTAGAGTTTATAAAGGCTATAGTTACAGCGGAAGAGGTTTTGTTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCGTTTGCGGATCAGCTAAGGCAACAACTTCCTCAGAAAAGGCAATCCAGGATAGAAGAAGCAAGTCCACTTGATGAACTAGCTAGTGGAATGATTGTTTCAAGCGGAAAGCAATGGTTACCTGTTCCTGAAGTCGTTGAAGGTGTGCAGTGTGATCTCCCATTTGAGTTTCAGGTTCTGGAGATTGCATTAGAAGTTGTCTGTACATACTTGAATTCTAGTGTGGCAGACCTTGAGAGAGAAGCCTACCCTGTTTTAGATGAACTGGCTAGAAATGTTAGCACCAAGAACCTTGAACTTGTGAGGAGTTTGAAAAGCATTCTTACGCGTTTGCTTGCACGTGTACAGAAGGTGAGGGATGAACTCGAACATTTGTTGGATGACAATGAAGATATGGCACATTTATATTTAACAAGGAAATGGATGCAGAATCAACAGCCTGAGGCTTTGTTGGGGCGTTCTGCTTCAAATAGCATATCCGCACCCTATTTACGTCGGCTTAGTTCTAACAGAAGTGGGAGCTTGGTAAACAGTAACAATATGGATTACGATGATGTAGAAGATCTAGAGATGCTGCTTGAGGCATATTTTATGCAACTGGATGGAACCCGTAACAAAATATTATCTGTGCGGGAATATATTGATGACACGGAGGATTATGTCAACATACAACTTGATAACCAACGAAACGAACTCATTCAGCTCCAGTTGACATTGACCATTGCATCATTTGCGATAGCAGTGGAGACCTTGATATCTGGTATATTTGGTATGAACATCCCCTGTATATTATACACCAAGAAAGGGATATTTGAGCCCTTTGTTGGGGGTATTACTGCATTTTCCGTGTTACTCTTCTTTCTCATATTCGGGTATGCCAGGTGGAAGAAGCTGCTTGATACATGA

Protein Analysis

460

Amino Acids

51.56

Weight (kDa)

6.94

Isoelectric Point (pI)

59.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 94 - 303 1.4e-20 Magnesium transporter MRS2-like
CorA PF01544 251 - 448 2.4e-08 CorA-like Mg2+ transporter protein
MRS2-like PF22099 338 - 387 1.1e-06 Magnesium transporter MRS2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 413
AccB7I CCANNNNNTGG 1 cut(s) 240
AccII CGCG 3 cut(s) 182, 309, 802
AclWI GGATC 3 cut(s) 274, 446, 492
AcsI RAATTY 1 cut(s) 688
AcuI CTGAAG 1 cut(s) 624
AcvI CACGTG 1 cut(s) 815
AfaI GTAC 3 cut(s) 148, 679, 819
AfiI CCNNNNNNNGG 5 cut(s) 240, 379, 1278, 1298, 1299
AflIII ACRYGT 2 cut(s) 800, 814
AgsI TTSAA 7 cut(s) 25, 576, 614, 688, 770, 787, 942
AjnI CCWGG 3 cut(s) 233, 521, 1352
AluBI AGCT 6 cut(s) 274, 490, 557, 996, 1177, 1366
AluI AGCT 6 cut(s) 274, 490, 557, 996, 1177, 1366
Alw21I GWGCWC 1 cut(s) 276
Alw26I GTCTC 1 cut(s) 1214
AlwI GGATC 3 cut(s) 274, 446, 492
AlwNI CAGNNNCTG 1 cut(s) 652
Ama87I CYCGRG 1 cut(s) 324
AoxI GGCC 4 cut(s) 70, 222, 343, 387
ApeKI GCWGC 7 cut(s) 30, 33, 36, 103, 311, 1048, 1366
ApoI RAATTY 1 cut(s) 688
Asp700I GAANNNNTTC 1 cut(s) 1170
AspLEI GCGC 2 cut(s) 30, 311
AspS9I GGNCC 3 cut(s) 11, 71, 344
AsuC2I CCSGG 2 cut(s) 325, 326
AsuHPI GGTGA 1 cut(s) 838
AvaI CYCGRG 1 cut(s) 324
AvaII GGWCC 1 cut(s) 11
AxyI CCTNAGG 1 cut(s) 915
BanII GRGCYC 2 cut(s) 276, 1293
BbrPI CACGTG 1 cut(s) 815
BbsI GAAGAC 1 cut(s) 343
Bbv12I GWGCWC 1 cut(s) 276
BbvI GCAGC 7 cut(s) 42, 45, 48, 115, 298, 1035, 1353
BccI CCATC 1 cut(s) 1070
BceAI ACGGC 1 cut(s) 91
BcgI CGANNNNNNTGC 2 cut(s) 92, 126
BciT130I CCWGG 3 cut(s) 235, 523, 1354
BcnI CCSGG 2 cut(s) 325, 326
BcoDI GTCTC 1 cut(s) 1214
BfaI CTAG 6 cut(s) 378, 554, 558, 693, 744, 1040
BfmI CTRYAG 1 cut(s) 420
BglII AGATCT 1 cut(s) 1036
Bme1390I CCNGG 5 cut(s) 235, 325, 326, 523, 1354
Bme18I GGWCC 1 cut(s) 11
BmeT110I CYCGRG 1 cut(s) 324
BmgT120I GGNCC 3 cut(s) 11, 71, 344
BmiI GGNNCC 4 cut(s) 12, 13, 232, 1081
BmrFI CCNGG 5 cut(s) 235, 325, 326, 523, 1354
BmsI GCATC 6 cut(s) 48, 234, 378, 888, 1035, 1208
BpiI GAAGAC 1 cut(s) 343
BpmI CTGGAG 3 cut(s) 349, 674, 1163
Bpu10I CCTNAGC 1 cut(s) 491
BpuEI CTTGAG 3 cut(s) 352, 728, 1073
BpuMI CCSGG 2 cut(s) 325, 326
BsaAI YACGTR 1 cut(s) 815
BsaI GGTCTC 1 cut(s) 1214
BsaJI CCNNGG 2 cut(s) 324, 390
Bsc4I CCNNNNNNNGG 5 cut(s) 240, 379, 1278, 1298, 1299
Bse1I ACTGG 3 cut(s) 744, 1077, 1180
Bse21I CCTNAGG 1 cut(s) 915
Bse3DI GCAATG 2 cut(s) 593, 1194
BseBI CCWGG 3 cut(s) 235, 523, 1354
BseDI CCNNGG 2 cut(s) 324, 390
BseGI GGATG 8 cut(s) 39, 249, 369, 838, 859, 903, 1081, 1251
BseLI CCNNNNNNNGG 5 cut(s) 240, 379, 1278, 1298, 1299
BseMI GCAATG 2 cut(s) 593, 1194
BseMII CTCAG 2 cut(s) 521, 906
BseNI ACTGG 3 cut(s) 744, 1077, 1180
BseRI GAGGAG 3 cut(s) 108, 243, 793
BseXI GCAGC 7 cut(s) 42, 45, 48, 115, 298, 1035, 1353
BsgI GTGCAG 1 cut(s) 641
Bsh1236I CGCG 3 cut(s) 182, 309, 802
BshFI GGCC 4 cut(s) 72, 224, 345, 389
BsiHKAI GWGCWC 1 cut(s) 276
BsiHKCI CYCGRG 1 cut(s) 324
BsiSI CCGG 2 cut(s) 225, 325
BslFI GGGAC 1 cut(s) 341
BslI CCNNNNNNNGG 5 cut(s) 240, 379, 1278, 1298, 1299
BsmAI GTCTC 1 cut(s) 1214
BsmFI GGGAC 1 cut(s) 341
BsmI GAATGC 1 cut(s) 792
BsnI GGCC 4 cut(s) 72, 224, 345, 389
Bso31I GGTCTC 1 cut(s) 1214
BsoBI CYCGRG 1 cut(s) 324
Bsp1286I GDGCHC 2 cut(s) 276, 1293
Bsp1407I TGTACA 2 cut(s) 677, 817
Bsp143I GATC 6 cut(s) 113, 266, 451, 484, 628, 1036
Bsp19I CCATGG 1 cut(s) 390
BspANI GGCC 4 cut(s) 72, 224, 345, 389
BspCNI CTCAG 2 cut(s) 520, 907
BspFNI CGCG 3 cut(s) 182, 309, 802
BspLI GGNNCC 4 cut(s) 12, 13, 232, 1081
BspPI GGATC 3 cut(s) 274, 446, 492
BspTNI GGTCTC 1 cut(s) 1214
BsrDI GCAATG 2 cut(s) 593, 1194
BsrGI TGTACA 2 cut(s) 677, 817
BsrI ACTGG 3 cut(s) 744, 1077, 1180
BssECI CCNNGG 2 cut(s) 324, 390
BssMI GATC 6 cut(s) 113, 266, 451, 484, 628, 1036
BssT1I CCWWGG 1 cut(s) 390
Bst2UI CCWGG 3 cut(s) 235, 523, 1354
Bst4CI ACNGT 2 cut(s) 146, 1007
Bst6I CTCTTC 3 cut(s) 429, 462, 1334
BstAPI GCANNNNNTGC 1 cut(s) 1205
BstAUI TGTACA 2 cut(s) 677, 817
BstBAI YACGTR 1 cut(s) 815
BstC8I GCNNGC 2 cut(s) 193, 810
BstDEI CTNAG 4 cut(s) 491, 507, 915, 974
BstDSI CCRYGG 1 cut(s) 390
BstEII GGTNACC 1 cut(s) 591
BstF5I GGATG 8 cut(s) 39, 249, 369, 838, 859, 903, 1081, 1251
BstFNI CGCG 3 cut(s) 182, 309, 802
BstHHI GCGC 2 cut(s) 30, 311
BstKTI GATC 6 cut(s) 116, 269, 454, 487, 631, 1039
BstMAI GTCTC 1 cut(s) 1214
BstMBI GATC 6 cut(s) 113, 266, 451, 484, 628, 1036
BstNI CCWGG 3 cut(s) 235, 523, 1354
BstPI GGTNACC 1 cut(s) 591
BstSCI CCNGG 5 cut(s) 233, 323, 324, 521, 1352
BstSFI CTRYAG 1 cut(s) 420
BstUI CGCG 3 cut(s) 182, 309, 802
BstV1I GCAGC 7 cut(s) 42, 45, 48, 115, 298, 1035, 1353
BstV2I GAAGAC 1 cut(s) 343
BstX2I RGATCY 1 cut(s) 1036
BstYI RGATCY 1 cut(s) 1036
Bsu36I CCTNAGG 1 cut(s) 915
BsuRI GGCC 4 cut(s) 72, 224, 345, 389
BtgI CCRYGG 1 cut(s) 390
BtsCI GGATG 8 cut(s) 39, 249, 369, 838, 859, 903, 1081, 1251
BtsI GCAGTG 2 cut(s) 629, 1221
BtsIMutI CAGTG 2 cut(s) 629, 1221
Cac8I GCNNGC 2 cut(s) 193, 810
CaiI CAGNNNCTG 1 cut(s) 652
CfoI GCGC 2 cut(s) 30, 311
Cfr13I GGNCC 3 cut(s) 11, 71, 344
Cfr9I CCCGGG 1 cut(s) 324
CseI GACGC 1 cut(s) 315
Csp6I GTAC 3 cut(s) 147, 678, 818
CviAII CATG 2 cut(s) 391, 1377
CviQI GTAC 3 cut(s) 147, 678, 818
DdeI CTNAG 4 cut(s) 491, 507, 915, 974
DpnI GATC 6 cut(s) 115, 268, 453, 486, 630, 1038
DpnII GATC 6 cut(s) 113, 266, 451, 484, 628, 1036
Eam1104I CTCTTC 3 cut(s) 429, 462, 1334
EarI CTCTTC 3 cut(s) 429, 462, 1334
EciI GGCGGA 2 cut(s) 32, 279
Ecl136II GAGCTC 1 cut(s) 274
Eco130I CCWWGG 1 cut(s) 390
Eco24I GRGCYC 2 cut(s) 276, 1293
Eco31I GGTCTC 1 cut(s) 1214
Eco32I GATATC 1 cut(s) 1230
Eco47I GGWCC 1 cut(s) 11
Eco53kI GAGCTC 1 cut(s) 274
Eco57I CTGAAG 1 cut(s) 624
Eco72I CACGTG 1 cut(s) 815
Eco81I CCTNAGG 1 cut(s) 915
Eco88I CYCGRG 1 cut(s) 324
Eco91I GGTNACC 1 cut(s) 591
EcoICRI GAGCTC 1 cut(s) 274
EcoO109I RGGNCCY 1 cut(s) 11
EcoO65I GGTNACC 1 cut(s) 591
EcoRI GAATTC 1 cut(s) 688
EcoRII CCWGG 3 cut(s) 233, 521, 1352
EcoRV GATATC 1 cut(s) 1230
EcoT14I CCWWGG 1 cut(s) 390
EcoT38I GRGCYC 2 cut(s) 276, 1293
ErhI CCWWGG 1 cut(s) 390
FaeI CATG 2 cut(s) 394, 1380
FalI AAGNNNNNCTT 1 cut(s) 31
FaqI GGGAC 1 cut(s) 341
FatI CATG 2 cut(s) 390, 1376
FauI CCCGC 2 cut(s) 328, 1098
FokI GGATG 8 cut(s) 26, 256, 356, 845, 866, 910, 1088, 1238
FriOI GRGCYC 2 cut(s) 276, 1293
FspBI CTAG 6 cut(s) 378, 554, 558, 693, 744, 1040
GlaI GCGC 2 cut(s) 29, 310
GsuI CTGGAG 3 cut(s) 349, 674, 1163
HaeIII GGCC 4 cut(s) 72, 224, 345, 389
HapII CCGG 2 cut(s) 225, 325
HgaI GACGC 1 cut(s) 315
HhaI GCGC 2 cut(s) 30, 311
Hin1II CATG 2 cut(s) 394, 1380
Hin6I GCGC 2 cut(s) 28, 309
HinP1I GCGC 2 cut(s) 28, 309
HincII GTYRAC 2 cut(s) 1138, 1185
HindII GTYRAC 2 cut(s) 1138, 1185
HinfI GANTC 2 cut(s) 337, 904
HpaII CCGG 2 cut(s) 225, 325
HphI GGTGA 1 cut(s) 838
Hpy166II GTNNAC 5 cut(s) 542, 818, 1003, 1138, 1185
Hpy188I TCNGA 3 cut(s) 177, 271, 510
Hpy188III TCNNGA 3 cut(s) 602, 653, 1040
Hpy8I GTNNAC 5 cut(s) 542, 818, 1003, 1138, 1185
Hpy99I CGWCG 3 cut(s) 281, 309, 972
HpyAV CCTTC 7 cut(s) 25, 90, 202, 214, 379, 608, 817
HpyCH4III ACNGT 2 cut(s) 146, 1007
HpyCH4IV ACGT 2 cut(s) 814, 967
HpyCH4V TGCA 7 cut(s) 622, 662, 812, 901, 1069, 1199, 1313
HpyF3I CTNAG 4 cut(s) 491, 507, 915, 974
HpySE526I ACGT 2 cut(s) 814, 967
Hsp92II CATG 2 cut(s) 394, 1380
HspAI GCGC 2 cut(s) 28, 309
KflI GGGWCCC 1 cut(s) 11
Kzo9I GATC 6 cut(s) 113, 266, 451, 484, 628, 1036
LmnI GCTCC 3 cut(s) 230, 993, 1182
Lsp1109I GCAGC 7 cut(s) 42, 45, 48, 115, 298, 1035, 1353
LweI GCATC 6 cut(s) 48, 234, 378, 888, 1035, 1208
MaeI CTAG 6 cut(s) 378, 554, 558, 693, 744, 1040
MaeII ACGT 2 cut(s) 814, 967
MaeIII GTNAC 6 cut(s) 284, 424, 591, 1007, 1085, 1323
MalI GATC 6 cut(s) 115, 268, 453, 486, 630, 1038
MboI GATC 6 cut(s) 113, 266, 451, 484, 628, 1036
MflI RGATCY 1 cut(s) 1036
MhlI GDGCHC 2 cut(s) 276, 1293
MluCI AATT 2 cut(s) 400, 688
MluI ACGCGT 1 cut(s) 800
MmeI TCCRAC 1 cut(s) 831
MroXI GAANNNNTTC 1 cut(s) 1170
MseI TTAA 2 cut(s) 399, 884
MspA1I CMGCKG 1 cut(s) 431
MspI CCGG 2 cut(s) 225, 325
MspR9I CCNGG 5 cut(s) 235, 325, 326, 523, 1354
Mva1269I GAATGC 1 cut(s) 792
MvaI CCWGG 3 cut(s) 235, 523, 1354
MvnI CGCG 3 cut(s) 182, 309, 802
NciI CCSGG 2 cut(s) 325, 326
NcoI CCATGG 1 cut(s) 390
NdeII GATC 6 cut(s) 113, 266, 451, 484, 628, 1036
NlaIII CATG 2 cut(s) 394, 1380
NlaIV GGNNCC 4 cut(s) 12, 13, 232, 1081
NmeAIII GCCGAG 1 cut(s) 321
NmuCI GTSAC 1 cut(s) 284
PctI GAATGC 1 cut(s) 792
PdmI GAANNNNTTC 1 cut(s) 1170
PfeI GAWTC 2 cut(s) 337, 904
PflMI CCANNNNNTGG 1 cut(s) 240
PfoI TCCNGGA 1 cut(s) 521
PmaCI CACGTG 1 cut(s) 815
PmlI CACGTG 1 cut(s) 815
Ppu21I YACGTR 1 cut(s) 815
PpuMI RGGWCCY 1 cut(s) 11
PsiI TTATAA 1 cut(s) 413
Psp124BI GAGCTC 1 cut(s) 276
Psp5II RGGWCCY 1 cut(s) 11
Psp6I CCWGG 3 cut(s) 233, 521, 1352
PspCI CACGTG 1 cut(s) 815
PspEI GGTNACC 1 cut(s) 591
PspGI CCWGG 3 cut(s) 233, 521, 1352
PspN4I GGNNCC 4 cut(s) 12, 13, 232, 1081
PspPI GGNCC 3 cut(s) 11, 71, 344
PspPPI RGGWCCY 1 cut(s) 11
PstNI CAGNNNCTG 1 cut(s) 652
PsuI RGATCY 1 cut(s) 1036
RsaI GTAC 3 cut(s) 148, 679, 819
RsaNI GTAC 3 cut(s) 147, 678, 818
SacI GAGCTC 1 cut(s) 276
SaqAI TTAA 2 cut(s) 399, 884
Sau3AI GATC 6 cut(s) 113, 266, 451, 484, 628, 1036
Sau96I GGNCC 3 cut(s) 11, 71, 344
ScrFI CCNGG 5 cut(s) 235, 325, 326, 523, 1354
SduI GDGCHC 2 cut(s) 276, 1293
SfaNI GCATC 6 cut(s) 48, 234, 378, 888, 1035, 1208
SfcI CTRYAG 1 cut(s) 420
SinI GGWCC 1 cut(s) 11
SmaI CCCGGG 1 cut(s) 326
SmlI CTYRAG 3 cut(s) 331, 707, 1052
SmoI CTYRAG 3 cut(s) 331, 707, 1052
Sse9I AATT 2 cut(s) 400, 688
SspI AATATT 1 cut(s) 1095
SspMI CTAG 6 cut(s) 378, 554, 558, 693, 744, 1040
SstI GAGCTC 1 cut(s) 276
StyD4I CCNGG 5 cut(s) 233, 323, 324, 521, 1352
StyI CCWWGG 1 cut(s) 390
TaaI ACNGT 2 cut(s) 146, 1007
TaiI ACGT 2 cut(s) 817, 970
TaqI TCGA 4 cut(s) 112, 279, 304, 840
TasI AATT 2 cut(s) 400, 688
TatI WGTACW 2 cut(s) 677, 817
TauI GCSGC 5 cut(s) 48, 51, 100, 103, 198
TfiI GAWTC 2 cut(s) 337, 904
Tru1I TTAA 2 cut(s) 399, 884
Tru9I TTAA 2 cut(s) 399, 884
TscAI CASTG 2 cut(s) 629, 1221
TseFI GTSAC 1 cut(s) 284
TseI GCWGC 7 cut(s) 30, 33, 36, 103, 311, 1048, 1366
Tsp45I GTSAC 1 cut(s) 284
TspDTI ATGAA 6 cut(s) 55, 564, 750, 849, 876, 1262
TspGWI ACGGA 3 cut(s) 465, 1139, 1309
TspMI CCCGGG 1 cut(s) 324
TspRI CASTG 2 cut(s) 629, 1221
Van91I CCANNNNNTGG 1 cut(s) 240
VpaK11BI GGWCC 1 cut(s) 11
XapI RAATTY 1 cut(s) 688
XbaI TCTAGA 1 cut(s) 1039
XmaI CCCGGG 1 cut(s) 324
XmnI GAANNNNTTC 1 cut(s) 1170
XspI CTAG 6 cut(s) 378, 554, 558, 693, 744, 1040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.