RchiOBHm_Chr1g0372101

magnesium transporter

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
60948786 .. 60951875
3090 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59611

Sequence Viewer

Length: 1320 bp
ATGGGGAAAGGTCCGTTCTCGTTGAAGCGTAGCAGCAGCAGCCGGCGGCAGCGGCCGAAGAAGTTTATCGGCCCTCCACCCTCTCCTTTCCCTTCGCCGCCTCCTCCGCCTCGGCCCATGGGATCCGCCCCCTCCTCGCCCCTGAACAACAACAGTTTGGCTGTCAAGGCCAAGAAGAAGGCCGGCGGAGGAGCCAGGCTCTGGATGCGATTCGATCGCTGCGGCGGTTCCGAGCTCGTCGAGTGTGACAAGAATGCTATTATCCGACGCGCCGCCATTCCCCCTCGTGACTTGAGAATTCTCGGCCCCGTTTTCTCCCATTCCTCCAGCATCCTCGCCAGGGAGAAGGCCATGGTGGTGAATTTGGAGTTTATCAAGGCTATAGTTACCGCCGAAGAGGTTCTGTTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCGTTTGCGGATCAACTAAGGCAACAGCTTCCTCAATCAAGGGTTGATGAACAAGATAATCAACTGGATGCTTCAACAGCAAGGCAATGGCTACCTGTTCCCGAGGCCGTTGAAGGTTTGCAATGTGATCTCCCATTTGAGTTTCAGGTTCTCGAGATTGCTCTAGAAGTTGTCTGTACGTACTTGGATTCCAGTGTGGCAGACCTTGAGATGGAAGCCTACCCTGTGCTCGATGAACTCGCCAGAAATGTCAGCACCAAGAATCTTGAACTTGTTCGCAGTTTGAAAAGCAATCTCACCCGTTTGCTTGCACGAGTACAGAAGGTGAGGGATGAAATTGAACATTTGTTGGATGACAATGAAGACATGGCACATTTATATTTGACAAGAAAGTGGATTCAGAATCAACAATCTGAGGCCTTGTTGGCACGTTCTGGCTCAAATAGAAGCAGCCCTACTGCACCCAATCTCCGTCGGCTAGGCTCTAATAGAAGCAGTAGTTTGGTAACTAGCAACAACATGGGTGAAGATGATGTAGAGGATCTAGAAATGTTGCTTGAGGCTTATTTTATGCAACTTGATGGAACTCGTAACAAGATATTGTCTGTACGGGAGTATATAGATGACACAGAGGATTATGTCAACATTCAACTTGACAACCAGAGAAACGAACTCATTCAGCTCCAATTAACATTGACCATTGCATCATTTGCTATAGCCGTAGAGACCTTGATCGCTGGAATATTTGGTATGAACATTCCCTGTGTATTATACGATAAGAAGGGGATATTTGAGTTATTTGTTGGAGGTGTCACTGCATTTTCGGTATTGCTTTTCTTCCTTGTTTTTGGGTATGCAAGGTGGAAGAAGCTGCTTGGTTCGTGA

Protein Analysis

439

Amino Acids

49.14

Weight (kDa)

5.89

Isoelectric Point (pI)

61.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 81 - 281 1.6e-24 Magnesium transporter MRS2-like
CorA PF01544 235 - 428 1.4e-06 CorA-like Mg2+ transporter protein
MRS2-like PF22099 315 - 367 4.2e-07 Magnesium transporter MRS2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 201
AccII CGCG 1 cut(s) 270
AclWI GGATC 5 cut(s) 117, 130, 407, 453, 984
AcoI YGGCCR 1 cut(s) 53
AcsI RAATTY 2 cut(s) 297, 361
AfaI GTAC 4 cut(s) 613, 617, 753, 1044
AfiI CCNNNNNNNGG 3 cut(s) 201, 340, 646
AgsI TTSAA 7 cut(s) 25, 510, 548, 704, 721, 776, 1085
AjnI CCWGG 2 cut(s) 194, 338
AluBI AGCT 4 cut(s) 235, 463, 1117, 1306
AluI AGCT 4 cut(s) 235, 463, 1117, 1306
Alw21I GWGCWC 2 cut(s) 237, 666
Alw26I GTCTC 1 cut(s) 1154
AlwI GGATC 5 cut(s) 117, 130, 407, 453, 984
AlwNI CAGNNNCTG 1 cut(s) 201
Ama87I CYCGRG 2 cut(s) 536, 587
AoxI GGCC 9 cut(s) 53, 70, 113, 168, 180, 304, 348, 540, 852
ApeKI GCWGC 7 cut(s) 33, 36, 39, 49, 219, 885, 1306
ApoI RAATTY 2 cut(s) 297, 361
Asp700I GAANNNNTTC 3 cut(s) 399, 708, 1110
AspLEI GCGC 1 cut(s) 272
AspS9I GGNCC 4 cut(s) 11, 71, 114, 305
AsuHPI GGTGA 4 cut(s) 370, 724, 772, 971
AvaI CYCGRG 2 cut(s) 536, 587
AvaII GGWCC 1 cut(s) 11
BamHI GGATCC 1 cut(s) 122
BanII GRGCYC 1 cut(s) 237
BarI GAAGNNNNNNTAC 2 cut(s) 874, 906
BauI CACGAG 2 cut(s) 285, 747
BbsI GAAGAC 1 cut(s) 804
Bbv12I GWGCWC 2 cut(s) 237, 666
BbvI GCAGC 7 cut(s) 45, 48, 51, 61, 206, 897, 1293
BccI CCATC 2 cut(s) 640, 1010
BceAI ACGGC 2 cut(s) 527, 1139
BciT130I CCWGG 2 cut(s) 196, 340
BcoDI GTCTC 1 cut(s) 1154
BfaI CTAG 4 cut(s) 599, 914, 945, 980
BfmI CTRYAG 2 cut(s) 381, 1149
BglI GCCNNNNNGGC 1 cut(s) 860
Bme1390I CCNGG 2 cut(s) 196, 340
Bme18I GGWCC 1 cut(s) 11
BmeT110I CYCGRG 2 cut(s) 536, 587
BmgT120I GGNCC 4 cut(s) 11, 71, 114, 305
BmiI GGNNCC 4 cut(s) 124, 193, 229, 307
BmrFI CCNGG 2 cut(s) 196, 340
BmsI GCATC 4 cut(s) 195, 339, 493, 1148
BpiI GAAGAC 1 cut(s) 804
BplI GAGNNNNNCTC 2 cut(s) 183, 215
BpmI CTGGAG 1 cut(s) 310
BpuEI CTTGAG 3 cut(s) 313, 662, 1013
BsaAI YACGTR 1 cut(s) 615
BsaI GGTCTC 1 cut(s) 1154
BsaJI CCNNGG 5 cut(s) 110, 117, 339, 351, 537
BsaXI ACNNNNNCTCC 2 cut(s) 888, 918
Bsc4I CCNNNNNNNGG 3 cut(s) 201, 340, 646
Bse118I RCCGGY 2 cut(s) 42, 182
Bse1I ACTGG 2 cut(s) 504, 627
Bse3DI GCAATG 3 cut(s) 527, 563, 1134
BseBI CCWGG 2 cut(s) 196, 340
BseDI CCNNGG 5 cut(s) 110, 117, 339, 351, 537
BseGI GGATG 5 cut(s) 210, 330, 508, 772, 793
BseLI CCNNNNNNNGG 3 cut(s) 201, 340, 646
BseMI GCAATG 3 cut(s) 527, 563, 1134
BseMII CTCAG 1 cut(s) 840
BseNI ACTGG 2 cut(s) 504, 627
BseRI GAGGAG 3 cut(s) 93, 124, 204
BseX3I CGGCCG 1 cut(s) 53
BseXI GCAGC 7 cut(s) 45, 48, 51, 61, 206, 897, 1293
BsgI GTGCAG 1 cut(s) 879
Bsh1236I CGCG 1 cut(s) 270
Bsh1285I CGRYCG 2 cut(s) 56, 217
BshFI GGCC 9 cut(s) 55, 72, 115, 170, 182, 306, 350, 542, 854
BsiEI CGRYCG 2 cut(s) 56, 217
BsiHKAI GWGCWC 2 cut(s) 237, 666
BsiHKCI CYCGRG 2 cut(s) 536, 587
BsiSI CCGG 2 cut(s) 43, 183
BslI CCNNNNNNNGG 3 cut(s) 201, 340, 646
BsmAI GTCTC 1 cut(s) 1154
BsmI GAATGC 1 cut(s) 259
BsnI GGCC 9 cut(s) 55, 72, 115, 170, 182, 306, 350, 542, 854
Bso31I GGTCTC 1 cut(s) 1154
BsoBI CYCGRG 2 cut(s) 536, 587
Bsp1286I GDGCHC 2 cut(s) 237, 666
Bsp143I GATC 7 cut(s) 122, 214, 412, 445, 562, 976, 1167
Bsp19I CCATGG 2 cut(s) 117, 351
BspANI GGCC 9 cut(s) 55, 72, 115, 170, 182, 306, 350, 542, 854
BspCNI CTCAG 1 cut(s) 841
BspFNI CGCG 1 cut(s) 270
BspLI GGNNCC 4 cut(s) 124, 193, 229, 307
BspPI GGATC 5 cut(s) 117, 130, 407, 453, 984
BspTNI GGTCTC 1 cut(s) 1154
BsrDI GCAATG 3 cut(s) 527, 563, 1134
BsrFI RCCGGY 2 cut(s) 42, 182
BsrI ACTGG 2 cut(s) 504, 627
BssAI RCCGGY 2 cut(s) 42, 182
BssECI CCNNGG 5 cut(s) 110, 117, 339, 351, 537
BssMI GATC 7 cut(s) 122, 214, 412, 445, 562, 976, 1167
BssSI CACGAG 2 cut(s) 285, 747
BssT1I CCWWGG 2 cut(s) 117, 351
Bst2BI CACGAG 2 cut(s) 285, 747
Bst2UI CCWGG 2 cut(s) 196, 340
Bst4CI ACNGT 1 cut(s) 155
Bst6I CTCTTC 2 cut(s) 390, 423
BstAPI GCANNNNNTGC 1 cut(s) 1145
BstBAI YACGTR 1 cut(s) 615
BstC8I GCNNGC 3 cut(s) 44, 184, 744
BstDEI CTNAG 2 cut(s) 452, 849
BstDSI CCRYGG 2 cut(s) 117, 351
BstF5I GGATG 5 cut(s) 210, 330, 508, 772, 793
BstFNI CGCG 1 cut(s) 270
BstHHI GCGC 1 cut(s) 272
BstKTI GATC 7 cut(s) 125, 217, 415, 448, 565, 979, 1170
BstMAI GTCTC 1 cut(s) 1154
BstMBI GATC 7 cut(s) 122, 214, 412, 445, 562, 976, 1167
BstMCI CGRYCG 2 cut(s) 56, 217
BstMWI GCNNNNNNNGC 8 cut(s) 39, 52, 106, 167, 205, 512, 860, 1145
BstNI CCWGG 2 cut(s) 196, 340
BstSCI CCNGG 2 cut(s) 194, 338
BstSFI CTRYAG 2 cut(s) 381, 1149
BstSNI TACGTA 1 cut(s) 615
BstUI CGCG 1 cut(s) 270
BstV1I GCAGC 7 cut(s) 45, 48, 51, 61, 206, 897, 1293
BstV2I GAAGAC 1 cut(s) 804
BstX2I RGATCY 2 cut(s) 122, 976
BstYI RGATCY 2 cut(s) 122, 976
BstZI CGGCCG 1 cut(s) 53
BsuRI GGCC 9 cut(s) 55, 72, 115, 170, 182, 306, 350, 542, 854
BtgI CCRYGG 2 cut(s) 117, 351
BtsCI GGATG 5 cut(s) 210, 330, 508, 772, 793
BtsI GCAGTG 1 cut(s) 1248
BtsIMutI CAGTG 2 cut(s) 634, 1248
Cac8I GCNNGC 3 cut(s) 44, 184, 744
CaiI CAGNNNCTG 1 cut(s) 201
CfoI GCGC 1 cut(s) 272
Cfr10I RCCGGY 2 cut(s) 42, 182
Cfr13I GGNCC 4 cut(s) 11, 71, 114, 305
CseI GACGC 1 cut(s) 276
Csp6I GTAC 4 cut(s) 612, 616, 752, 1043
CviAII CATG 4 cut(s) 118, 352, 802, 955
CviQI GTAC 4 cut(s) 612, 616, 752, 1043
DdeI CTNAG 2 cut(s) 452, 849
DpnI GATC 7 cut(s) 124, 216, 414, 447, 564, 978, 1169
DpnII GATC 7 cut(s) 122, 214, 412, 445, 562, 976, 1167
EaeI YGGCCR 1 cut(s) 53
EagI CGGCCG 1 cut(s) 53
Eam1104I CTCTTC 2 cut(s) 390, 423
EarI CTCTTC 2 cut(s) 390, 423
EciI GGCGGA 3 cut(s) 96, 115, 201
Ecl136II GAGCTC 1 cut(s) 235
EclXI CGGCCG 1 cut(s) 53
Eco105I TACGTA 1 cut(s) 615
Eco130I CCWWGG 2 cut(s) 117, 351
Eco147I AGGCCT 1 cut(s) 854
Eco24I GRGCYC 1 cut(s) 237
Eco31I GGTCTC 1 cut(s) 1154
Eco47I GGWCC 1 cut(s) 11
Eco52I CGGCCG 1 cut(s) 53
Eco53kI GAGCTC 1 cut(s) 235
Eco88I CYCGRG 2 cut(s) 536, 587
EcoICRI GAGCTC 1 cut(s) 235
EcoRI GAATTC 1 cut(s) 297
EcoRII CCWGG 2 cut(s) 194, 338
EcoT14I CCWWGG 2 cut(s) 117, 351
EcoT38I GRGCYC 1 cut(s) 237
ErhI CCWWGG 2 cut(s) 117, 351
FaeI CATG 4 cut(s) 121, 355, 805, 958
FatI CATG 4 cut(s) 117, 351, 801, 954
FokI GGATG 5 cut(s) 217, 317, 515, 779, 800
FriOI GRGCYC 1 cut(s) 237
FspBI CTAG 4 cut(s) 599, 914, 945, 980
GlaI GCGC 1 cut(s) 271
GsuI CTGGAG 1 cut(s) 310
HaeIII GGCC 9 cut(s) 55, 72, 115, 170, 182, 306, 350, 542, 854
HapII CCGG 2 cut(s) 43, 183
HgaI GACGC 1 cut(s) 276
HhaI GCGC 1 cut(s) 272
Hin1II CATG 4 cut(s) 121, 355, 805, 958
Hin6I GCGC 1 cut(s) 270
HinP1I GCGC 1 cut(s) 270
HincII GTYRAC 1 cut(s) 1078
HindII GTYRAC 1 cut(s) 1078
HinfI GANTC 5 cut(s) 210, 623, 697, 832, 838
HpaII CCGG 2 cut(s) 43, 183
HphI GGTGA 4 cut(s) 370, 724, 772, 971
Hpy166II GTNNAC 1 cut(s) 1078
Hpy188I TCNGA 4 cut(s) 232, 266, 837, 850
Hpy188III TCNNGA 9 cut(s) 202, 287, 536, 587, 589, 599, 701, 980, 1317
Hpy8I GTNNAC 1 cut(s) 1078
Hpy99I CGWCG 3 cut(s) 242, 270, 912
HpyAV CCTTC 6 cut(s) 102, 172, 340, 542, 751, 1210
HpyCH4III ACNGT 1 cut(s) 155
HpyCH4IV ACGT 2 cut(s) 614, 865
HpyCH4V TGCA 7 cut(s) 556, 746, 896, 1009, 1139, 1253, 1292
HpyF10VI GCNNNNNNNGC 8 cut(s) 39, 52, 106, 167, 205, 512, 860, 1145
HpyF3I CTNAG 2 cut(s) 452, 849
HpySE526I ACGT 2 cut(s) 614, 865
Hsp92II CATG 4 cut(s) 121, 355, 805, 958
HspAI GCGC 1 cut(s) 270
KroI GCCGGC 2 cut(s) 42, 182
KroNI GCCGGC 2 cut(s) 44, 184
Kzo9I GATC 7 cut(s) 122, 214, 412, 445, 562, 976, 1167
LmnI GCTCC 2 cut(s) 191, 1122
Lsp1109I GCAGC 7 cut(s) 45, 48, 51, 61, 206, 897, 1293
LweI GCATC 4 cut(s) 195, 339, 493, 1148
MaeI CTAG 4 cut(s) 599, 914, 945, 980
MaeII ACGT 2 cut(s) 614, 865
MaeIII GTNAC 6 cut(s) 245, 287, 385, 940, 1025, 1246
MalI GATC 7 cut(s) 124, 216, 414, 447, 564, 978, 1169
MboI GATC 7 cut(s) 122, 214, 412, 445, 562, 976, 1167
MboII GAAGA 9 cut(s) 70, 187, 407, 410, 425, 809, 974, 1264, 1312
MflI RGATCY 2 cut(s) 122, 976
MhlI GDGCHC 2 cut(s) 237, 666
MluCI AATT 4 cut(s) 297, 361, 771, 1121
MmeI TCCRAC 3 cut(s) 289, 765, 1219
MroNI GCCGGC 2 cut(s) 42, 182
MroXI GAANNNNTTC 3 cut(s) 399, 708, 1110
MseI TTAA 1 cut(s) 1124
MslI CAYNNNNRTG 1 cut(s) 356
MspA1I CMGCKG 1 cut(s) 52
MspI CCGG 2 cut(s) 43, 183
MspR9I CCNGG 2 cut(s) 196, 340
Mva1269I GAATGC 1 cut(s) 259
MvaI CCWGG 2 cut(s) 196, 340
MvnI CGCG 1 cut(s) 270
MwoI GCNNNNNNNGC 8 cut(s) 39, 52, 106, 167, 205, 512, 860, 1145
NaeI GCCGGC 2 cut(s) 44, 184
NcoI CCATGG 2 cut(s) 117, 351
NdeII GATC 7 cut(s) 122, 214, 412, 445, 562, 976, 1167
NgoMIV GCCGGC 2 cut(s) 42, 182
NlaIII CATG 4 cut(s) 121, 355, 805, 958
NlaIV GGNNCC 4 cut(s) 124, 193, 229, 307
NmeAIII GCCGAG 2 cut(s) 91, 282
NmuCI GTSAC 3 cut(s) 245, 287, 1246
PaeR7I CTCGAG 1 cut(s) 587
PceI AGGCCT 1 cut(s) 854
PctI GAATGC 1 cut(s) 259
PdiI GCCGGC 2 cut(s) 44, 184
PdmI GAANNNNTTC 3 cut(s) 399, 708, 1110
PfeI GAWTC 5 cut(s) 210, 623, 697, 832, 838
PflMI CCANNNNNTGG 1 cut(s) 201
Ple19I CGATCG 1 cut(s) 217
Ppu21I YACGTR 1 cut(s) 615
Psp124BI GAGCTC 1 cut(s) 237
Psp6I CCWGG 2 cut(s) 194, 338
PspGI CCWGG 2 cut(s) 194, 338
PspN4I GGNNCC 4 cut(s) 124, 193, 229, 307
PspPI GGNCC 4 cut(s) 11, 71, 114, 305
PstNI CAGNNNCTG 1 cut(s) 201
PsuI RGATCY 2 cut(s) 122, 976
PvuI CGATCG 1 cut(s) 217
RsaI GTAC 4 cut(s) 613, 617, 753, 1044
RsaNI GTAC 4 cut(s) 612, 616, 752, 1043
RseI CAYNNNNRTG 1 cut(s) 356
SacI GAGCTC 1 cut(s) 237
SaqAI TTAA 1 cut(s) 1124
Sau3AI GATC 7 cut(s) 122, 214, 412, 445, 562, 976, 1167
Sau96I GGNCC 4 cut(s) 11, 71, 114, 305
ScrFI CCNGG 2 cut(s) 196, 340
SduI GDGCHC 2 cut(s) 237, 666
SfaNI GCATC 4 cut(s) 195, 339, 493, 1148
SfcI CTRYAG 2 cut(s) 381, 1149
Sfr274I CTCGAG 1 cut(s) 587
SinI GGWCC 1 cut(s) 11
SlaI CTCGAG 1 cut(s) 587
SmiMI CAYNNNNRTG 1 cut(s) 356
SmlI CTYRAG 4 cut(s) 292, 587, 641, 992
SmoI CTYRAG 4 cut(s) 292, 587, 641, 992
SnaBI TACGTA 1 cut(s) 615
Sse9I AATT 4 cut(s) 297, 361, 771, 1121
SseBI AGGCCT 1 cut(s) 854
SspI AATATT 1 cut(s) 1179
SspMI CTAG 4 cut(s) 599, 914, 945, 980
SstI GAGCTC 1 cut(s) 237
StuI AGGCCT 1 cut(s) 854
StyD4I CCNGG 2 cut(s) 194, 338
StyI CCWWGG 2 cut(s) 117, 351
TaaI ACNGT 1 cut(s) 155
TaiI ACGT 2 cut(s) 617, 868
TaqI TCGA 4 cut(s) 213, 240, 588, 666
TasI AATT 4 cut(s) 297, 361, 771, 1121
TatI WGTACW 1 cut(s) 751
TauI GCSGC 5 cut(s) 49, 55, 100, 225, 275
TfiI GAWTC 5 cut(s) 210, 623, 697, 832, 838
Tru1I TTAA 1 cut(s) 1124
Tru9I TTAA 1 cut(s) 1124
TscAI CASTG 2 cut(s) 634, 1255
TseFI GTSAC 3 cut(s) 245, 287, 1246
TseI GCWGC 7 cut(s) 33, 36, 39, 49, 219, 885, 1306
Tsp45I GTSAC 3 cut(s) 245, 287, 1246
TspDTI ATGAA 5 cut(s) 498, 684, 783, 810, 1202
TspGWI ACGGA 2 cut(s) 426, 896
TspRI CASTG 2 cut(s) 634, 1255
Van91I CCANNNNNTGG 1 cut(s) 201
VpaK11BI GGWCC 1 cut(s) 11
XapI RAATTY 2 cut(s) 297, 361
XbaI TCTAGA 2 cut(s) 598, 979
XhoI CTCGAG 1 cut(s) 587
XmnI GAANNNNTTC 3 cut(s) 399, 708, 1110
XspI CTAG 4 cut(s) 599, 914, 945, 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.