RLG00000026923

magnesium transporter

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
7026041 .. 7030447
4407 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026923

Sequence Viewer

Length: 1665 bp
ATGGGGAAGGGTCCGTTCTCGTTGAAGCGTAGCAGCAGCAGCCGGCGGCAGCGGCCGAAGAAGTTGATCGGCCCTCCACCTTCTCCTTTCCCTTCGCCGCCGCCTCCTCAGCCTCGGCCCATGGGATCCGCCCCCTCCTCGCCCCTGAACAACAACAGTTTGGCTGTCAAGGCCAAGAAGAAGGCCGGCGGAGGAGCCAGGCTCTGGATGCGATTCGATCGCTGCGGCGGTTCCGAGCTCGTCGAGTGTGACAAGAATGCTATTATCCGACGCGCCGCCATTCCCCCTCGTGACTTGAGAATTCTGGGCCCTGTTTTCTCCCATTCCTCCAGCATCCTCGCCAGGGAGAAGGCCATGGTGGTGAATTTGGAGTTTATCAAGGCTATAGTTACCGCCGAAGAGGTTCTGTTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCATTTGCGGATCAACTAAGGCAACAGCTTCCTCAATCAAGGGTTGATGAACAAGATAATCAACTGGATGCTTCAACAGCAAGGCAATGGCTACCTGTTCCAGAGGCCGTTGAGGGTTTGCAATGTGATCTCCCATTTGAGTTTCAGGTTCTCGAGATTGCTCTAGAAGTTGTCTGTACATTCTTGGATTCCAGTGTGGCAGACCTTGAGATGGAAGCTTACCCTGTGCTCGATGAACTCGCTAGAAATGTCAGCACCAAGAATCTTGAACTTGTTCGCAGTCTGAAAAGCAATCTCACCCGTTTACTTGCACGAGTACAGAAGGTGAGGGATGAAATTGAACATTTGTTGGATGACAATGAAGACATGGCACATTTATATTTGACAAGAAAGTGGATTCAGAATCAACAATCTGAGGCCTTGTTGGCACGTTCTGGCTCAAATAGAAGCAGCCCTATTGCACCCAATCTCCGTCGGCTAGGCTCTAATAGAAGCAGTAGTTTGGTAACTAGCAACAACATGGGTGAAGATGATGTAGAGGATCTAGAAATGTTGCTTGAGGCTTATTTTATGCAACTTGATGGAACTCGTAACAAGATATTGTCTGTACGGGAGTATATAGATGACACAGAGGATTATGTCAACATTCAACTTGACAACCAGCGAAACGAACTCATTCAGCTCCAATTAACATTGACCATTGCATCATTTGCTATAGCCGTAGAGACCTTGATCGCTGGAATATTTGGTATGAACATTCCCTGTGTATTATACGATAAGAAGGGGATATTTGAGTTCTTTGTTGGAGGTGTCACTGCATTTTCGGTATTGCTTTTCTTCCTTGTTTTTGGGTATGCAAGGTGGAAGAAGCTGCTTGGTTCATCACGATGTGCTGGATCGGTGGCCGTTGCCGTTGACCTCGATTGCATCTCCGATTTGGAGACCACCGCCACGCGAAGAAGACGCAAGAAGAAAAGGATCGTCACAATTGTAGCCTCTGCAAGTCCTGGAGTTCGCAATTGCAGCCTCTGCAAGTCCTGTCAGAGACCTCATGCCGGCCACTTTAGTCTTGATCTGGCCAGTCTTTCAACCTCATCGCCCAAAGGTCGTCTTTTCCGACCTCACTTCCCAATTTCCGTCGCCAATCAATTCAACTTCTGCACTTTCCGATTTCCGTTGCCAAGTGTCATCGCCGATTTCCGACCTCTCTTGGTTGTCGCTATATAA

Protein Analysis

555

Amino Acids

61.7

Weight (kDa)

8.88

Isoelectric Point (pI)

59.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 82 - 282 5.3e-24 Magnesium transporter MRS2-like
CorA PF01544 232 - 429 2.1e-07 CorA-like Mg2+ transporter protein
MRS2-like PF22099 316 - 368 5.7e-07 Magnesium transporter MRS2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 204
AccII CGCG 2 cut(s) 273, 1393
AclWI GGATC 7 cut(s) 120, 133, 410, 456, 987, 1342, 1424
AcoI YGGCCR 4 cut(s) 53, 1341, 1495, 1515
AcsI RAATTY 2 cut(s) 300, 364
AdeI CACNNNGTG 1 cut(s) 1328
AfaI GTAC 3 cut(s) 616, 756, 1047
AfiI CCNNNNNNNGG 4 cut(s) 204, 343, 649, 1493
AgsI TTSAA 7 cut(s) 25, 513, 707, 779, 1088, 1527, 1591
AjnI CCWGG 3 cut(s) 197, 341, 1444
AluBI AGCT 5 cut(s) 238, 466, 656, 1120, 1309
AluI AGCT 5 cut(s) 238, 466, 656, 1120, 1309
Alw21I GWGCWC 2 cut(s) 240, 669
Alw26I GTCTC 3 cut(s) 1157, 1373, 1477
AlwI GGATC 7 cut(s) 120, 133, 410, 456, 987, 1342, 1424
AlwNI CAGNNNCTG 2 cut(s) 204, 1467
Ama87I CYCGRG 1 cut(s) 590
ApaI GGGCCC 1 cut(s) 311
ApeKI GCWGC 8 cut(s) 33, 36, 39, 49, 222, 888, 1309, 1461
ApoI RAATTY 2 cut(s) 300, 364
Asp700I GAANNNNTTC 3 cut(s) 402, 711, 1113
AspLEI GCGC 1 cut(s) 275
AspS9I GGNCC 5 cut(s) 11, 71, 117, 307, 308
AsuHPI GGTGA 4 cut(s) 373, 727, 775, 974
AvaI CYCGRG 1 cut(s) 590
AvaII GGWCC 1 cut(s) 11
BaeGI GKGCMC 1 cut(s) 311
BalI TGGCCA 1 cut(s) 1517
BamHI GGATCC 1 cut(s) 125
BanII GRGCYC 2 cut(s) 240, 311
BauI CACGAG 2 cut(s) 288, 750
BbsI GAAGAC 2 cut(s) 807, 1405
Bbv12I GWGCWC 2 cut(s) 240, 669
BbvCI CCTCAGC 1 cut(s) 108
BbvI GCAGC 8 cut(s) 45, 48, 51, 61, 209, 900, 1296, 1473
BccI CCATC 2 cut(s) 643, 1013
BceAI ACGGC 4 cut(s) 530, 1142, 1328, 1334
BciT130I CCWGG 3 cut(s) 199, 343, 1446
BcoDI GTCTC 3 cut(s) 1157, 1373, 1477
BfaI CTAG 5 cut(s) 602, 681, 917, 948, 983
BfmI CTRYAG 2 cut(s) 384, 1152
BglI GCCNNNNNGGC 1 cut(s) 863
Bme1390I CCNGG 3 cut(s) 199, 343, 1446
Bme18I GGWCC 1 cut(s) 11
BmeT110I CYCGRG 1 cut(s) 590
BmgT120I GGNCC 5 cut(s) 11, 71, 117, 307, 308
BmiI GGNNCC 5 cut(s) 12, 127, 196, 232, 309
BmrFI CCNGG 3 cut(s) 199, 343, 1446
BmsI GCATC 5 cut(s) 198, 342, 496, 1151, 1374
BpiI GAAGAC 2 cut(s) 807, 1405
BplI GAGNNNNNCTC 2 cut(s) 186, 218
BpmI CTGGAG 2 cut(s) 313, 1467
Bpu10I CCTNAGC 1 cut(s) 108
BpuEI CTTGAG 3 cut(s) 316, 665, 1016
BsaI GGTCTC 3 cut(s) 1157, 1373, 1477
BsaJI CCNNGG 4 cut(s) 113, 120, 342, 354
BsaXI ACNNNNNCTCC 2 cut(s) 891, 921
Bsc4I CCNNNNNNNGG 4 cut(s) 204, 343, 649, 1493
Bse118I RCCGGY 3 cut(s) 42, 185, 1493
Bse1I ACTGG 3 cut(s) 507, 630, 1518
Bse3DI GCAATG 3 cut(s) 530, 566, 1137
BseBI CCWGG 3 cut(s) 199, 343, 1446
BseDI CCNNGG 4 cut(s) 113, 120, 342, 354
BseGI GGATG 5 cut(s) 213, 333, 511, 775, 796
BseLI CCNNNNNNNGG 4 cut(s) 204, 343, 649, 1493
BseMI GCAATG 3 cut(s) 530, 566, 1137
BseMII CTCAG 2 cut(s) 122, 843
BseNI ACTGG 3 cut(s) 507, 630, 1518
BseRI GAGGAG 3 cut(s) 96, 127, 207
BseSI GKGCMC 1 cut(s) 311
BseX3I CGGCCG 1 cut(s) 53
BseXI GCAGC 8 cut(s) 45, 48, 51, 61, 209, 900, 1296, 1473
BsgI GTGCAG 1 cut(s) 1582
Bsh1236I CGCG 2 cut(s) 273, 1393
Bsh1285I CGRYCG 2 cut(s) 56, 220
BsiEI CGRYCG 2 cut(s) 56, 220
BsiHKAI GWGCWC 2 cut(s) 240, 669
BsiHKCI CYCGRG 1 cut(s) 590
BsiSI CCGG 3 cut(s) 43, 186, 1494
BslI CCNNNNNNNGG 4 cut(s) 204, 343, 649, 1493
BsmAI GTCTC 3 cut(s) 1157, 1373, 1477
BsmI GAATGC 1 cut(s) 262
Bso31I GGTCTC 3 cut(s) 1157, 1373, 1477
BsoBI CYCGRG 1 cut(s) 590
Bsp120I GGGCCC 1 cut(s) 307
Bsp1286I GDGCHC 3 cut(s) 240, 311, 669
Bsp1407I TGTACA 1 cut(s) 614
Bsp19I CCATGG 2 cut(s) 120, 354
BspCNI CTCAG 2 cut(s) 121, 844
BspFNI CGCG 2 cut(s) 273, 1393
BspLI GGNNCC 5 cut(s) 12, 127, 196, 232, 309
BspPI GGATC 7 cut(s) 120, 133, 410, 456, 987, 1342, 1424
BspTNI GGTCTC 3 cut(s) 1157, 1373, 1477
BsrDI GCAATG 3 cut(s) 530, 566, 1137
BsrFI RCCGGY 3 cut(s) 42, 185, 1493
BsrGI TGTACA 1 cut(s) 614
BsrI ACTGG 3 cut(s) 507, 630, 1518
BssAI RCCGGY 3 cut(s) 42, 185, 1493
BssECI CCNNGG 4 cut(s) 113, 120, 342, 354
BssSI CACGAG 2 cut(s) 288, 750
BssT1I CCWWGG 2 cut(s) 120, 354
Bst2BI CACGAG 2 cut(s) 288, 750
Bst2UI CCWGG 3 cut(s) 199, 343, 1446
Bst4CI ACNGT 1 cut(s) 158
Bst6I CTCTTC 2 cut(s) 393, 426
BstAPI GCANNNNNTGC 2 cut(s) 1148, 1467
BstAUI TGTACA 1 cut(s) 614
BstC8I GCNNGC 3 cut(s) 44, 187, 1495
BstDEI CTNAG 3 cut(s) 108, 455, 852
BstDSI CCRYGG 2 cut(s) 120, 354
BstF5I GGATG 5 cut(s) 213, 333, 511, 775, 796
BstFNI CGCG 2 cut(s) 273, 1393
BstHHI GCGC 1 cut(s) 275
BstMAI GTCTC 3 cut(s) 1157, 1373, 1477
BstMCI CGRYCG 2 cut(s) 56, 220
BstNI CCWGG 3 cut(s) 199, 343, 1446
BstSCI CCNGG 3 cut(s) 197, 341, 1444
BstSFI CTRYAG 2 cut(s) 384, 1152
BstSLI GKGCMC 1 cut(s) 311
BstUI CGCG 2 cut(s) 273, 1393
BstV1I GCAGC 8 cut(s) 45, 48, 51, 61, 209, 900, 1296, 1473
BstV2I GAAGAC 2 cut(s) 807, 1405
BstX2I RGATCY 2 cut(s) 125, 979
BstYI RGATCY 2 cut(s) 125, 979
BstZI CGGCCG 1 cut(s) 53
BtgI CCRYGG 2 cut(s) 120, 354
BtgZI GCGATG 2 cut(s) 1518, 1612
BtsCI GGATG 5 cut(s) 213, 333, 511, 775, 796
BtsI GCAGTG 1 cut(s) 1251
BtsIMutI CAGTG 2 cut(s) 637, 1251
Cac8I GCNNGC 3 cut(s) 44, 187, 1495
CaiI CAGNNNCTG 2 cut(s) 204, 1467
CfoI GCGC 1 cut(s) 275
Cfr10I RCCGGY 3 cut(s) 42, 185, 1493
Cfr13I GGNCC 5 cut(s) 11, 71, 117, 307, 308
CseI GACGC 2 cut(s) 279, 1410
Csp6I GTAC 3 cut(s) 615, 755, 1046
CviAII CATG 5 cut(s) 121, 355, 805, 958, 1490
CviQI GTAC 3 cut(s) 615, 755, 1046
DdeI CTNAG 3 cut(s) 108, 455, 852
DraIII CACNNNGTG 1 cut(s) 1328
EaeI YGGCCR 4 cut(s) 53, 1341, 1495, 1515
EagI CGGCCG 1 cut(s) 53
Eam1104I CTCTTC 2 cut(s) 393, 426
EarI CTCTTC 2 cut(s) 393, 426
EciI GGCGGA 2 cut(s) 118, 204
Ecl136II GAGCTC 1 cut(s) 238
EclXI CGGCCG 1 cut(s) 53
Eco130I CCWWGG 2 cut(s) 120, 354
Eco147I AGGCCT 1 cut(s) 857
Eco24I GRGCYC 2 cut(s) 240, 311
Eco31I GGTCTC 3 cut(s) 1157, 1373, 1477
Eco47I GGWCC 1 cut(s) 11
Eco52I CGGCCG 1 cut(s) 53
Eco53kI GAGCTC 1 cut(s) 238
Eco88I CYCGRG 1 cut(s) 590
EcoICRI GAGCTC 1 cut(s) 238
EcoO109I RGGNCCY 1 cut(s) 308
EcoRI GAATTC 1 cut(s) 300
EcoRII CCWGG 3 cut(s) 197, 341, 1444
EcoT14I CCWWGG 2 cut(s) 120, 354
EcoT38I GRGCYC 2 cut(s) 240, 311
ErhI CCWWGG 2 cut(s) 120, 354
FaeI CATG 5 cut(s) 124, 358, 808, 961, 1493
FalI AAGNNNNNCTT 2 cut(s) 1533, 1565
FatI CATG 5 cut(s) 120, 354, 804, 957, 1489
FokI GGATG 5 cut(s) 220, 320, 518, 782, 803
FriOI GRGCYC 2 cut(s) 240, 311
FspBI CTAG 5 cut(s) 602, 681, 917, 948, 983
GlaI GCGC 1 cut(s) 274
GsuI CTGGAG 2 cut(s) 313, 1467
HapII CCGG 3 cut(s) 43, 186, 1494
HgaI GACGC 2 cut(s) 279, 1410
HhaI GCGC 1 cut(s) 275
Hin1II CATG 5 cut(s) 124, 358, 808, 961, 1493
Hin6I GCGC 1 cut(s) 273
HinP1I GCGC 1 cut(s) 273
HincII GTYRAC 2 cut(s) 1081, 1354
HindII GTYRAC 2 cut(s) 1081, 1354
HindIII AAGCTT 1 cut(s) 654
HinfI GANTC 5 cut(s) 213, 626, 700, 835, 841
HpaII CCGG 3 cut(s) 43, 186, 1494
HphI GGTGA 4 cut(s) 373, 727, 775, 974
Hpy166II GTNNAC 3 cut(s) 743, 1081, 1354
Hpy8I GTNNAC 3 cut(s) 743, 1081, 1354
Hpy99I CGWCG 4 cut(s) 245, 273, 915, 1580
HpyAV CCTTC 6 cut(s) 90, 102, 175, 343, 754, 1213
HpyCH4III ACNGT 1 cut(s) 158
HpyCH4IV ACGT 1 cut(s) 868
HpyF3I CTNAG 3 cut(s) 108, 455, 852
HpySE526I ACGT 1 cut(s) 868
Hsp92II CATG 5 cut(s) 124, 358, 808, 961, 1493
HspAI GCGC 1 cut(s) 273
KroI GCCGGC 3 cut(s) 42, 185, 1493
KroNI GCCGGC 3 cut(s) 44, 187, 1495
LmnI GCTCC 2 cut(s) 194, 1125
Lsp1109I GCAGC 8 cut(s) 45, 48, 51, 61, 209, 900, 1296, 1473
LweI GCATC 5 cut(s) 198, 342, 496, 1151, 1374
MaeI CTAG 5 cut(s) 602, 681, 917, 948, 983
MaeII ACGT 1 cut(s) 868
MaeIII GTNAC 7 cut(s) 248, 290, 388, 943, 1028, 1249, 1420
MfeI CAATTG 2 cut(s) 1425, 1456
MflI RGATCY 2 cut(s) 125, 979
MhlI GDGCHC 3 cut(s) 240, 311, 669
MlsI TGGCCA 1 cut(s) 1517
MluCI AATT 8 cut(s) 300, 364, 774, 1124, 1425, 1456, 1569, 1586
MluNI TGGCCA 1 cut(s) 1517
MmeI TCCRAC 5 cut(s) 292, 768, 1222, 1579, 1663
Mox20I TGGCCA 1 cut(s) 1517
MroNI GCCGGC 3 cut(s) 42, 185, 1493
MroXI GAANNNNTTC 3 cut(s) 402, 711, 1113
MscI TGGCCA 1 cut(s) 1517
MseI TTAA 1 cut(s) 1127
MslI CAYNNNNRTG 2 cut(s) 359, 1324
Msp20I TGGCCA 1 cut(s) 1517
MspA1I CMGCKG 1 cut(s) 52
MspI CCGG 3 cut(s) 43, 186, 1494
MspR9I CCNGG 3 cut(s) 199, 343, 1446
MunI CAATTG 2 cut(s) 1425, 1456
Mva1269I GAATGC 1 cut(s) 262
MvaI CCWGG 3 cut(s) 199, 343, 1446
MvnI CGCG 2 cut(s) 273, 1393
NaeI GCCGGC 3 cut(s) 44, 187, 1495
NcoI CCATGG 2 cut(s) 120, 354
NgoMIV GCCGGC 3 cut(s) 42, 185, 1493
NlaIII CATG 5 cut(s) 124, 358, 808, 961, 1493
NlaIV GGNNCC 5 cut(s) 12, 127, 196, 232, 309
NmeAIII GCCGAG 1 cut(s) 94
NmuCI GTSAC 4 cut(s) 248, 290, 1249, 1420
PaeR7I CTCGAG 1 cut(s) 590
PceI AGGCCT 1 cut(s) 857
PcsI WCGNNNNNNNCGW 1 cut(s) 1552
PctI GAATGC 1 cut(s) 262
PdiI GCCGGC 3 cut(s) 44, 187, 1495
PdmI GAANNNNTTC 3 cut(s) 402, 711, 1113
PfeI GAWTC 5 cut(s) 213, 626, 700, 835, 841
PflMI CCANNNNNTGG 1 cut(s) 204
PfoI TCCNGGA 1 cut(s) 1444
Ple19I CGATCG 1 cut(s) 220
Psp124BI GAGCTC 1 cut(s) 240
Psp6I CCWGG 3 cut(s) 197, 341, 1444
PspGI CCWGG 3 cut(s) 197, 341, 1444
PspN4I GGNNCC 5 cut(s) 12, 127, 196, 232, 309
PspOMI GGGCCC 1 cut(s) 307
PspPI GGNCC 5 cut(s) 11, 71, 117, 307, 308
PstNI CAGNNNCTG 2 cut(s) 204, 1467
PsuI RGATCY 2 cut(s) 125, 979
PvuI CGATCG 1 cut(s) 220
RsaI GTAC 3 cut(s) 616, 756, 1047
RsaNI GTAC 3 cut(s) 615, 755, 1046
RseI CAYNNNNRTG 2 cut(s) 359, 1324
SacI GAGCTC 1 cut(s) 240
SaqAI TTAA 1 cut(s) 1127
Sau96I GGNCC 5 cut(s) 11, 71, 117, 307, 308
ScrFI CCNGG 3 cut(s) 199, 343, 1446
SduI GDGCHC 3 cut(s) 240, 311, 669
SfaNI GCATC 5 cut(s) 198, 342, 496, 1151, 1374
SfcI CTRYAG 2 cut(s) 384, 1152
Sfr274I CTCGAG 1 cut(s) 590
SinI GGWCC 1 cut(s) 11
SlaI CTCGAG 1 cut(s) 590
SmiMI CAYNNNNRTG 2 cut(s) 359, 1324
SmlI CTYRAG 4 cut(s) 295, 590, 644, 995
SmoI CTYRAG 4 cut(s) 295, 590, 644, 995
Sse9I AATT 8 cut(s) 300, 364, 774, 1124, 1425, 1456, 1569, 1586
SseBI AGGCCT 1 cut(s) 857
SspI AATATT 1 cut(s) 1182
SspMI CTAG 5 cut(s) 602, 681, 917, 948, 983
SstI GAGCTC 1 cut(s) 240
StuI AGGCCT 1 cut(s) 857
StyD4I CCNGG 3 cut(s) 197, 341, 1444
StyI CCWWGG 2 cut(s) 120, 354
TaaI ACNGT 1 cut(s) 158
TaiI ACGT 1 cut(s) 871
TaqI TCGA 5 cut(s) 216, 243, 591, 669, 1359
TasI AATT 8 cut(s) 300, 364, 774, 1124, 1425, 1456, 1569, 1586
TatI WGTACW 2 cut(s) 614, 754
TauI GCSGC 6 cut(s) 49, 55, 100, 103, 228, 278
TfiI GAWTC 5 cut(s) 213, 626, 700, 835, 841
Tru1I TTAA 1 cut(s) 1127
Tru9I TTAA 1 cut(s) 1127
TscAI CASTG 2 cut(s) 637, 1258
TseFI GTSAC 4 cut(s) 248, 290, 1249, 1420
TseI GCWGC 8 cut(s) 33, 36, 39, 49, 222, 888, 1309, 1461
Tsp45I GTSAC 4 cut(s) 248, 290, 1249, 1420
TspDTI ATGAA 6 cut(s) 501, 687, 786, 813, 1205, 1308
TspGWI ACGGA 3 cut(s) 899, 1564, 1602
TspRI CASTG 2 cut(s) 637, 1258
Van91I CCANNNNNTGG 1 cut(s) 204
VpaK11BI GGWCC 1 cut(s) 11
XapI RAATTY 2 cut(s) 300, 364
XbaI TCTAGA 2 cut(s) 601, 982
XhoI CTCGAG 1 cut(s) 590
XmnI GAANNNNTTC 3 cut(s) 402, 711, 1113
XspI CTAG 5 cut(s) 602, 681, 917, 948, 983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.