Rw1G033260

magnesium transporter

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
61381788 .. 61384844
3057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G033260.1

Sequence Viewer

Length: 1323 bp
ATGGGGAAAGGTCCGTTCTCGTTGAAGCGTAGCAGCAGCAGCCGGCGGCAGAGGCCGAAGAAGTTTATCGGCCCTCCACCCTCTCCTTTCCCTTCGCCGCCTCCTCCTCCTCCTCGGCCCATGGGATCCGCCCCCTCCTCGCCCCTGAACAACAACAGTTTGGCTGTCAAGGCCAAGAAGAAGGCCGGCGGAGGAGCCAGGCTCTGGATGCGATTCGATCGCTGCGGCGGTTCCGAGCTCGTCGAGTGTGACAAGAATGCTATTATCCGACGCGCCGCCATTCCCCCTCGTGACTTGAGAATTCTCGGCCCCGTTTTCTCCCATTCCTCCAGCATCCTCGCCAGGGAGAAGGCCATGGTGGTGAATTTGGAGTTTATCAAGGCTATAGTTACCGCCGAAGAGGTTCTGTTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCGTTTGCGGATCAACTAAGGCAACAGCTTCCTCAATCCAGGGTTGATGAACAAGATAATCAACTGGATGCTTCAACGGCAAGGCAATGGCTACCTGTTCCCGAGGCCGTTGAAGGTTTGCAATGTGATCTCCCATTTGAGTTTCAGGTTCTCGAGATTGCTCTAGAAGTTGTCTGTACGTACTTGGATTCCAGTGTGGCAGACCTTGAGATGGAAGCCTACCCTGTGCTCGATGAACTCGCCAGAAATGTCAGCACCAAGAATCTTGAACTTGTTCGCAGTTTGAAAAGCAATCTCACCCGTTTGCTTGCACGAGTACAGAAGGTGAGGGATGAAATTGAACATTTGTTGGATGACAATGAAGACATGGCACATTTATATTTGACAAGAAAGTGGATTCAGAATCAACAATCTGAGGCCTTGTTGGCGCGTTCTGGGTCAAATAGAAGCAGCCCTACTGCACCCAATCTCCGTCGGCTAGGCTCTAATAGAAGCAGTAGTTTGGTAACTAGCAACAACATGGGTGAAGATGATGTAGAGGATCTAGAAATGTTGCTTGAGGCTTATTTTATGCAACTTGATGGAACTCGTAACAAGATATTGTCTGTACGGGAGTATATAGATGACACAGAGGATTATGTCAACATTCAACTTGACAACCAGAGAAACGAACTCATTCAGCTCCAATTAACATTGACCATTGCATCATTTGCTATAGCCGTAGAGACCTTGATCGCTGGAATATTTGGTATGAACATTCCCTGTGTATTATACGATAAGAAGGGGATATTTGAGTTATTTGTTGGAGGTGTCACTGCATTTTCGGTATTGCTTTTCTTCCTTGTTTTTGGGTATGCAAGGTGGAAGAAGCTGCTTGGTTCGTGA

Protein Analysis

440

Amino Acids

49.24

Weight (kDa)

5.89

Isoelectric Point (pI)

62.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 82 - 282 1.6e-24 Magnesium transporter MRS2-like
CorA PF01544 237 - 429 1.5e-06 CorA-like Mg2+ transporter protein
MRS2-like PF22099 316 - 368 4.2e-07 Magnesium transporter MRS2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 204
AccII CGCG 2 cut(s) 273, 868
AciI CCGC 9 cut(s) 46, 98, 129, 189, 225, 228, 276, 393, 446
AclWI GGATC 5 cut(s) 120, 133, 410, 456, 987
AcsI RAATTY 2 cut(s) 300, 364
AfaI GTAC 4 cut(s) 616, 620, 756, 1047
AfiI CCNNNNNNNGG 3 cut(s) 204, 343, 649
AgsI TTSAA 7 cut(s) 25, 513, 551, 707, 724, 779, 1088
AjnI CCWGG 3 cut(s) 197, 341, 476
AluBI AGCT 4 cut(s) 238, 466, 1120, 1309
AluI AGCT 4 cut(s) 238, 466, 1120, 1309
Alw21I GWGCWC 2 cut(s) 240, 669
Alw26I GTCTC 1 cut(s) 1157
AlwI GGATC 5 cut(s) 120, 133, 410, 456, 987
AlwNI CAGNNNCTG 1 cut(s) 204
Ama87I CYCGRG 2 cut(s) 539, 590
AoxI GGCC 9 cut(s) 53, 70, 116, 171, 183, 307, 351, 543, 855
ApeKI GCWGC 6 cut(s) 33, 36, 39, 222, 888, 1309
ApoI RAATTY 2 cut(s) 300, 364
Asp700I GAANNNNTTC 3 cut(s) 402, 711, 1113
AspLEI GCGC 2 cut(s) 275, 868
AspS9I GGNCC 4 cut(s) 11, 71, 117, 308
AsuHPI GGTGA 4 cut(s) 373, 727, 775, 974
AvaI CYCGRG 2 cut(s) 539, 590
AvaII GGWCC 1 cut(s) 11
BamHI GGATCC 1 cut(s) 125
BanII GRGCYC 1 cut(s) 240
BarI GAAGNNNNNNTAC 2 cut(s) 877, 909
BauI CACGAG 2 cut(s) 288, 750
BbsI GAAGAC 1 cut(s) 807
Bbv12I GWGCWC 2 cut(s) 240, 669
BbvI GCAGC 6 cut(s) 45, 48, 51, 209, 900, 1296
BccI CCATC 2 cut(s) 643, 1013
BceAI ACGGC 3 cut(s) 530, 531, 1142
BciT130I CCWGG 3 cut(s) 199, 343, 478
BcoDI GTCTC 1 cut(s) 1157
BfaI CTAG 4 cut(s) 602, 917, 948, 983
BfmI CTRYAG 2 cut(s) 384, 1152
BglI GCCNNNNNGGC 1 cut(s) 863
Bme1390I CCNGG 3 cut(s) 199, 343, 478
Bme18I GGWCC 1 cut(s) 11
BmeT110I CYCGRG 2 cut(s) 539, 590
BmgT120I GGNCC 4 cut(s) 11, 71, 117, 308
BmiI GGNNCC 4 cut(s) 127, 196, 232, 310
BmrFI CCNGG 3 cut(s) 199, 343, 478
BmsI GCATC 4 cut(s) 198, 342, 496, 1151
BpiI GAAGAC 1 cut(s) 807
BplI GAGNNNNNCTC 2 cut(s) 186, 218
BpmI CTGGAG 1 cut(s) 313
BpuEI CTTGAG 3 cut(s) 316, 665, 1016
BsaAI YACGTR 1 cut(s) 618
BsaI GGTCTC 1 cut(s) 1157
BsaJI CCNNGG 6 cut(s) 113, 120, 342, 354, 477, 540
BsaXI ACNNNNNCTCC 2 cut(s) 891, 921
Bsc4I CCNNNNNNNGG 3 cut(s) 204, 343, 649
Bse118I RCCGGY 2 cut(s) 42, 185
Bse1I ACTGG 2 cut(s) 507, 630
Bse3DI GCAATG 3 cut(s) 530, 566, 1137
BseBI CCWGG 3 cut(s) 199, 343, 478
BseDI CCNNGG 6 cut(s) 113, 120, 342, 354, 477, 540
BseGI GGATG 5 cut(s) 213, 333, 511, 775, 796
BseLI CCNNNNNNNGG 3 cut(s) 204, 343, 649
BseMI GCAATG 3 cut(s) 530, 566, 1137
BseMII CTCAG 1 cut(s) 843
BseNI ACTGG 2 cut(s) 507, 630
BseRI GAGGAG 6 cut(s) 93, 96, 99, 102, 127, 207
BseXI GCAGC 6 cut(s) 45, 48, 51, 209, 900, 1296
BsgI GTGCAG 1 cut(s) 882
Bsh1236I CGCG 2 cut(s) 273, 868
Bsh1285I CGRYCG 1 cut(s) 220
BshFI GGCC 9 cut(s) 55, 72, 118, 173, 185, 309, 353, 545, 857
BsiEI CGRYCG 1 cut(s) 220
BsiHKAI GWGCWC 2 cut(s) 240, 669
BsiHKCI CYCGRG 2 cut(s) 539, 590
BsiSI CCGG 2 cut(s) 43, 186
BslI CCNNNNNNNGG 3 cut(s) 204, 343, 649
BsmAI GTCTC 1 cut(s) 1157
BsmI GAATGC 1 cut(s) 262
BsnI GGCC 9 cut(s) 55, 72, 118, 173, 185, 309, 353, 545, 857
Bso31I GGTCTC 1 cut(s) 1157
BsoBI CYCGRG 2 cut(s) 539, 590
Bsp1286I GDGCHC 2 cut(s) 240, 669
Bsp143I GATC 7 cut(s) 125, 217, 415, 448, 565, 979, 1170
Bsp19I CCATGG 2 cut(s) 120, 354
BspACI CCGC 9 cut(s) 46, 98, 129, 189, 225, 228, 276, 393, 446
BspANI GGCC 9 cut(s) 55, 72, 118, 173, 185, 309, 353, 545, 857
BspCNI CTCAG 1 cut(s) 844
BspFNI CGCG 2 cut(s) 273, 868
BspLI GGNNCC 4 cut(s) 127, 196, 232, 310
BspPI GGATC 5 cut(s) 120, 133, 410, 456, 987
BspTNI GGTCTC 1 cut(s) 1157
BsrDI GCAATG 3 cut(s) 530, 566, 1137
BsrFI RCCGGY 2 cut(s) 42, 185
BsrI ACTGG 2 cut(s) 507, 630
BssAI RCCGGY 2 cut(s) 42, 185
BssECI CCNNGG 6 cut(s) 113, 120, 342, 354, 477, 540
BssMI GATC 7 cut(s) 125, 217, 415, 448, 565, 979, 1170
BssSI CACGAG 2 cut(s) 288, 750
BssT1I CCWWGG 2 cut(s) 120, 354
Bst2BI CACGAG 2 cut(s) 288, 750
Bst2UI CCWGG 3 cut(s) 199, 343, 478
Bst4CI ACNGT 1 cut(s) 158
Bst6I CTCTTC 2 cut(s) 393, 426
BstAPI GCANNNNNTGC 1 cut(s) 1148
BstBAI YACGTR 1 cut(s) 618
BstC8I GCNNGC 3 cut(s) 44, 187, 747
BstDEI CTNAG 2 cut(s) 455, 852
BstDSI CCRYGG 2 cut(s) 120, 354
BstF5I GGATG 5 cut(s) 213, 333, 511, 775, 796
BstFNI CGCG 2 cut(s) 273, 868
BstHHI GCGC 2 cut(s) 275, 868
BstKTI GATC 7 cut(s) 128, 220, 418, 451, 568, 982, 1173
BstMAI GTCTC 1 cut(s) 1157
BstMBI GATC 7 cut(s) 125, 217, 415, 448, 565, 979, 1170
BstMCI CGRYCG 1 cut(s) 220
BstMWI GCNNNNNNNGC 7 cut(s) 39, 52, 170, 208, 515, 863, 1148
BstNI CCWGG 3 cut(s) 199, 343, 478
BstSCI CCNGG 3 cut(s) 197, 341, 476
BstSFI CTRYAG 2 cut(s) 384, 1152
BstSNI TACGTA 1 cut(s) 618
BstUI CGCG 2 cut(s) 273, 868
BstV1I GCAGC 6 cut(s) 45, 48, 51, 209, 900, 1296
BstV2I GAAGAC 1 cut(s) 807
BstX2I RGATCY 2 cut(s) 125, 979
BstYI RGATCY 2 cut(s) 125, 979
BsuRI GGCC 9 cut(s) 55, 72, 118, 173, 185, 309, 353, 545, 857
BtgI CCRYGG 2 cut(s) 120, 354
BtsCI GGATG 5 cut(s) 213, 333, 511, 775, 796
BtsI GCAGTG 1 cut(s) 1251
BtsIMutI CAGTG 2 cut(s) 637, 1251
Cac8I GCNNGC 3 cut(s) 44, 187, 747
CaiI CAGNNNCTG 1 cut(s) 204
CfoI GCGC 2 cut(s) 275, 868
Cfr10I RCCGGY 2 cut(s) 42, 185
Cfr13I GGNCC 4 cut(s) 11, 71, 117, 308
CseI GACGC 1 cut(s) 279
Csp6I GTAC 4 cut(s) 615, 619, 755, 1046
CviAII CATG 4 cut(s) 121, 355, 805, 958
CviQI GTAC 4 cut(s) 615, 619, 755, 1046
DdeI CTNAG 2 cut(s) 455, 852
DpnI GATC 7 cut(s) 127, 219, 417, 450, 567, 981, 1172
DpnII GATC 7 cut(s) 125, 217, 415, 448, 565, 979, 1170
Eam1104I CTCTTC 2 cut(s) 393, 426
EarI CTCTTC 2 cut(s) 393, 426
EciI GGCGGA 2 cut(s) 118, 204
Ecl136II GAGCTC 1 cut(s) 238
Eco105I TACGTA 1 cut(s) 618
Eco130I CCWWGG 2 cut(s) 120, 354
Eco147I AGGCCT 1 cut(s) 857
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 1 cut(s) 1157
Eco47I GGWCC 1 cut(s) 11
Eco53kI GAGCTC 1 cut(s) 238
Eco88I CYCGRG 2 cut(s) 539, 590
EcoICRI GAGCTC 1 cut(s) 238
EcoRI GAATTC 1 cut(s) 300
EcoRII CCWGG 3 cut(s) 197, 341, 476
EcoT14I CCWWGG 2 cut(s) 120, 354
EcoT38I GRGCYC 1 cut(s) 240
ErhI CCWWGG 2 cut(s) 120, 354
FaeI CATG 4 cut(s) 124, 358, 808, 961
FatI CATG 4 cut(s) 120, 354, 804, 957
FokI GGATG 5 cut(s) 220, 320, 518, 782, 803
FriOI GRGCYC 1 cut(s) 240
FspBI CTAG 4 cut(s) 602, 917, 948, 983
GlaI GCGC 2 cut(s) 274, 867
GsuI CTGGAG 1 cut(s) 313
HaeIII GGCC 9 cut(s) 55, 72, 118, 173, 185, 309, 353, 545, 857
HapII CCGG 2 cut(s) 43, 186
HgaI GACGC 1 cut(s) 279
HhaI GCGC 2 cut(s) 275, 868
Hin1II CATG 4 cut(s) 124, 358, 808, 961
Hin6I GCGC 2 cut(s) 273, 866
HinP1I GCGC 2 cut(s) 273, 866
HincII GTYRAC 1 cut(s) 1081
HindII GTYRAC 1 cut(s) 1081
HinfI GANTC 5 cut(s) 213, 626, 700, 835, 841
HpaII CCGG 2 cut(s) 43, 186
HphI GGTGA 4 cut(s) 373, 727, 775, 974
Hpy166II GTNNAC 1 cut(s) 1081
Hpy188I TCNGA 4 cut(s) 235, 269, 840, 853
Hpy188III TCNNGA 9 cut(s) 205, 290, 539, 590, 592, 602, 704, 983, 1320
Hpy8I GTNNAC 1 cut(s) 1081
Hpy99I CGWCG 3 cut(s) 245, 273, 915
HpyAV CCTTC 6 cut(s) 102, 175, 343, 545, 754, 1213
HpyCH4III ACNGT 1 cut(s) 158
HpyCH4IV ACGT 1 cut(s) 617
HpyCH4V TGCA 7 cut(s) 559, 749, 899, 1012, 1142, 1256, 1295
HpyF10VI GCNNNNNNNGC 7 cut(s) 39, 52, 170, 208, 515, 863, 1148
HpyF3I CTNAG 2 cut(s) 455, 852
HpySE526I ACGT 1 cut(s) 617
Hsp92II CATG 4 cut(s) 124, 358, 808, 961
HspAI GCGC 2 cut(s) 273, 866
KroI GCCGGC 2 cut(s) 42, 185
KroNI GCCGGC 2 cut(s) 44, 187
Kzo9I GATC 7 cut(s) 125, 217, 415, 448, 565, 979, 1170
LmnI GCTCC 2 cut(s) 194, 1125
Lsp1109I GCAGC 6 cut(s) 45, 48, 51, 209, 900, 1296
LweI GCATC 4 cut(s) 198, 342, 496, 1151
MaeI CTAG 4 cut(s) 602, 917, 948, 983
MaeII ACGT 1 cut(s) 617
MaeIII GTNAC 6 cut(s) 248, 290, 388, 943, 1028, 1249
MalI GATC 7 cut(s) 127, 219, 417, 450, 567, 981, 1172
MboI GATC 7 cut(s) 125, 217, 415, 448, 565, 979, 1170
MboII GAAGA 9 cut(s) 70, 190, 410, 413, 428, 812, 977, 1267, 1315
MflI RGATCY 2 cut(s) 125, 979
MhlI GDGCHC 2 cut(s) 240, 669
MluCI AATT 4 cut(s) 300, 364, 774, 1124
MmeI TCCRAC 3 cut(s) 292, 768, 1222
MroNI GCCGGC 2 cut(s) 42, 185
MroXI GAANNNNTTC 3 cut(s) 402, 711, 1113
MseI TTAA 1 cut(s) 1127
MslI CAYNNNNRTG 1 cut(s) 359
MspI CCGG 2 cut(s) 43, 186
MspR9I CCNGG 3 cut(s) 199, 343, 478
Mva1269I GAATGC 1 cut(s) 262
MvaI CCWGG 3 cut(s) 199, 343, 478
MvnI CGCG 2 cut(s) 273, 868
MwoI GCNNNNNNNGC 7 cut(s) 39, 52, 170, 208, 515, 863, 1148
NaeI GCCGGC 2 cut(s) 44, 187
NcoI CCATGG 2 cut(s) 120, 354
NdeII GATC 7 cut(s) 125, 217, 415, 448, 565, 979, 1170
NgoMIV GCCGGC 2 cut(s) 42, 185
NlaIII CATG 4 cut(s) 124, 358, 808, 961
NlaIV GGNNCC 4 cut(s) 127, 196, 232, 310
NmeAIII GCCGAG 2 cut(s) 94, 285
NmuCI GTSAC 3 cut(s) 248, 290, 1249
PaeR7I CTCGAG 1 cut(s) 590
PceI AGGCCT 1 cut(s) 857
PctI GAATGC 1 cut(s) 262
PdiI GCCGGC 2 cut(s) 44, 187
PdmI GAANNNNTTC 3 cut(s) 402, 711, 1113
PfeI GAWTC 5 cut(s) 213, 626, 700, 835, 841
PflMI CCANNNNNTGG 1 cut(s) 204
Ple19I CGATCG 1 cut(s) 220
Ppu21I YACGTR 1 cut(s) 618
Psp124BI GAGCTC 1 cut(s) 240
Psp6I CCWGG 3 cut(s) 197, 341, 476
PspGI CCWGG 3 cut(s) 197, 341, 476
PspN4I GGNNCC 4 cut(s) 127, 196, 232, 310
PspPI GGNCC 4 cut(s) 11, 71, 117, 308
PstNI CAGNNNCTG 1 cut(s) 204
PsuI RGATCY 2 cut(s) 125, 979
PvuI CGATCG 1 cut(s) 220
RsaI GTAC 4 cut(s) 616, 620, 756, 1047
RsaNI GTAC 4 cut(s) 615, 619, 755, 1046
RseI CAYNNNNRTG 1 cut(s) 359
SacI GAGCTC 1 cut(s) 240
SaqAI TTAA 1 cut(s) 1127
Sau3AI GATC 7 cut(s) 125, 217, 415, 448, 565, 979, 1170
Sau96I GGNCC 4 cut(s) 11, 71, 117, 308
ScrFI CCNGG 3 cut(s) 199, 343, 478
SduI GDGCHC 2 cut(s) 240, 669
SfaNI GCATC 4 cut(s) 198, 342, 496, 1151
SfcI CTRYAG 2 cut(s) 384, 1152
Sfr274I CTCGAG 1 cut(s) 590
SinI GGWCC 1 cut(s) 11
SlaI CTCGAG 1 cut(s) 590
SmiMI CAYNNNNRTG 1 cut(s) 359
SmlI CTYRAG 4 cut(s) 295, 590, 644, 995
SmoI CTYRAG 4 cut(s) 295, 590, 644, 995
SnaBI TACGTA 1 cut(s) 618
Sse9I AATT 4 cut(s) 300, 364, 774, 1124
SseBI AGGCCT 1 cut(s) 857
SsiI CCGC 9 cut(s) 46, 98, 129, 189, 225, 228, 276, 393, 446
SspI AATATT 1 cut(s) 1182
SspMI CTAG 4 cut(s) 602, 917, 948, 983
SstI GAGCTC 1 cut(s) 240
StuI AGGCCT 1 cut(s) 857
StyD4I CCNGG 3 cut(s) 197, 341, 476
StyI CCWWGG 2 cut(s) 120, 354
TaaI ACNGT 1 cut(s) 158
TaiI ACGT 1 cut(s) 620
TaqI TCGA 4 cut(s) 216, 243, 591, 669
TasI AATT 4 cut(s) 300, 364, 774, 1124
TatI WGTACW 1 cut(s) 754
TauI GCSGC 4 cut(s) 49, 100, 228, 278
TfiI GAWTC 5 cut(s) 213, 626, 700, 835, 841
Tru1I TTAA 1 cut(s) 1127
Tru9I TTAA 1 cut(s) 1127
TscAI CASTG 2 cut(s) 637, 1258
TseFI GTSAC 3 cut(s) 248, 290, 1249
TseI GCWGC 6 cut(s) 33, 36, 39, 222, 888, 1309
Tsp45I GTSAC 3 cut(s) 248, 290, 1249
TspDTI ATGAA 5 cut(s) 501, 687, 786, 813, 1205
TspGWI ACGGA 2 cut(s) 429, 899
TspRI CASTG 2 cut(s) 637, 1258
Van91I CCANNNNNTGG 1 cut(s) 204
VpaK11BI GGWCC 1 cut(s) 11
XapI RAATTY 2 cut(s) 300, 364
XbaI TCTAGA 2 cut(s) 601, 982
XhoI CTCGAG 1 cut(s) 590
XmnI GAANNNNTTC 3 cut(s) 402, 711, 1113
XspI CTAG 4 cut(s) 602, 917, 948, 983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.