Long chain base biosynthesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g01910 |
| malus_domestica | MD02G1254800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr4g0385711 RchiOBHm_Chr4g0392541 RchiOBHm_Chr7g0217771 RchiOBHm_Chr7g0217781 RchiOBHm_Chr7g0225391 |
| rosa_laevigata | RLG00000009613 RLG00000015392 RLG00000030410 RLG00000036877 |
| rosa_multiflora | Rmu_sc0001863.1_g000004 Rmu_sc0006711.1_g000026 Rmu_sc0011203.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00203840 |
| rosa_samantha | Rh4AG311200 Rh4BG318300 Rh4CG333600 Rh5BG392500 Rh6CG013300 Rh6DG014500 Rh7AG312400 |
| rosa_wichuraiana | Rw0G020880 Rw7G026460 Rw7G028190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 18 |
| AcoI | YGGCCR | 1 cut(s) | 272 |
| AfaI | GTAC | 2 cut(s) | 86, 197 |
| AgsI | TTSAA | 1 cut(s) | 181 |
| AoxI | GGCC | 1 cut(s) | 272 |
| ApeKI | GCWGC | 1 cut(s) | 125 |
| AsuHPI | GGTGA | 1 cut(s) | 53 |
| BbvI | GCAGC | 1 cut(s) | 112 |
| BclI | TGATCA | 1 cut(s) | 58 |
| BfaI | CTAG | 1 cut(s) | 48 |
| BisI | GCNGC | 2 cut(s) | 18, 126 |
| BlsI | GCNGC | 2 cut(s) | 19, 127 |
| Bpu10I | CCTNAGC | 1 cut(s) | 13 |
| BpuEI | CTTGAG | 1 cut(s) | 170 |
| BsaAI | YACGTR | 1 cut(s) | 195 |
| Bse1I | ACTGG | 2 cut(s) | 43, 275 |
| BseNI | ACTGG | 2 cut(s) | 43, 275 |
| BseRI | GAGGAG | 1 cut(s) | 167 |
| BseXI | GCAGC | 1 cut(s) | 112 |
| BsgI | GTGCAG | 1 cut(s) | 19 |
| BshFI | GGCC | 1 cut(s) | 274 |
| BsiWI | CGTACG | 1 cut(s) | 195 |
| BslFI | GGGAC | 1 cut(s) | 18 |
| BsmFI | GGGAC | 1 cut(s) | 18 |
| BsnI | GGCC | 1 cut(s) | 274 |
| Bsp143I | GATC | 2 cut(s) | 58, 223 |
| BspACI | CCGC | 1 cut(s) | 18 |
| BspANI | GGCC | 1 cut(s) | 274 |
| BsrI | ACTGG | 2 cut(s) | 43, 275 |
| BssMI | GATC | 2 cut(s) | 58, 223 |
| BstBAI | YACGTR | 1 cut(s) | 195 |
| BstDEI | CTNAG | 1 cut(s) | 13 |
| BstKTI | GATC | 2 cut(s) | 61, 226 |
| BstMBI | GATC | 2 cut(s) | 58, 223 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 17, 125, 134 |
| BstNSI | RCATGY | 1 cut(s) | 245 |
| BstSNI | TACGTA | 1 cut(s) | 195 |
| BstV1I | GCAGC | 1 cut(s) | 112 |
| BsuRI | GGCC | 1 cut(s) | 274 |
| BtsIMutI | CAGTG | 1 cut(s) | 36 |
| Csp6I | GTAC | 2 cut(s) | 85, 196 |
| CviAII | CATG | 2 cut(s) | 236, 242 |
| CviJI | RGCY | 2 cut(s) | 17, 274 |
| CviKI_1 | RGCY | 2 cut(s) | 17, 274 |
| CviQI | GTAC | 2 cut(s) | 85, 196 |
| DdeI | CTNAG | 1 cut(s) | 13 |
| DpnI | GATC | 2 cut(s) | 60, 225 |
| DpnII | GATC | 2 cut(s) | 58, 223 |
| EaeI | YGGCCR | 1 cut(s) | 272 |
| Eco105I | TACGTA | 1 cut(s) | 195 |
| Eco32I | GATATC | 1 cut(s) | 265 |
| EcoRV | GATATC | 1 cut(s) | 265 |
| FaeI | CATG | 2 cut(s) | 239, 245 |
| FaiI | YATR | 5 cut(s) | 112, 206, 237, 243, 280 |
| FaqI | GGGAC | 1 cut(s) | 18 |
| FatI | CATG | 2 cut(s) | 235, 241 |
| FbaI | TGATCA | 1 cut(s) | 58 |
| Fnu4HI | GCNGC | 2 cut(s) | 18, 126 |
| Fsp4HI | GCNGC | 2 cut(s) | 18, 126 |
| FspBI | CTAG | 1 cut(s) | 48 |
| GluI | GCNGC | 2 cut(s) | 18, 126 |
| HaeIII | GGCC | 1 cut(s) | 274 |
| Hin1II | CATG | 2 cut(s) | 239, 245 |
| HinfI | GANTC | 1 cut(s) | 30 |
| HphI | GGTGA | 1 cut(s) | 53 |
| Hpy188III | TCNNGA | 1 cut(s) | 149 |
| HpyAV | CCTTC | 1 cut(s) | 17 |
| HpyCH4IV | ACGT | 3 cut(s) | 87, 194, 198 |
| HpyCH4V | TGCA | 2 cut(s) | 36, 241 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 17, 125, 134 |
| HpyF3I | CTNAG | 1 cut(s) | 13 |
| HpySE526I | ACGT | 3 cut(s) | 87, 194, 198 |
| Hsp92II | CATG | 2 cut(s) | 239, 245 |
| Ksp22I | TGATCA | 1 cut(s) | 58 |
| Kzo9I | GATC | 2 cut(s) | 58, 223 |
| LpnPI | CCDG | 4 cut(s) | 24, 66, 77, 174 |
| Lsp1109I | GCAGC | 1 cut(s) | 112 |
| MaeI | CTAG | 1 cut(s) | 48 |
| MaeII | ACGT | 3 cut(s) | 87, 194, 198 |
| MaeIII | GTNAC | 2 cut(s) | 52, 199 |
| MalI | GATC | 2 cut(s) | 60, 225 |
| MboI | GATC | 2 cut(s) | 58, 223 |
| MboII | GAAGA | 1 cut(s) | 193 |
| MnlI | CCTC | 3 cut(s) | 20, 145, 262 |
| MslI | CAYNNNNRTG | 1 cut(s) | 240 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 17, 125, 134 |
| NdeII | GATC | 2 cut(s) | 58, 223 |
| NlaIII | CATG | 2 cut(s) | 239, 245 |
| NspI | RCATGY | 1 cut(s) | 245 |
| PfeI | GAWTC | 1 cut(s) | 30 |
| Pfl23II | CGTACG | 1 cut(s) | 195 |
| PkrI | GCNGC | 2 cut(s) | 19, 127 |
| Ppu21I | YACGTR | 1 cut(s) | 195 |
| PspLI | CGTACG | 1 cut(s) | 195 |
| RsaI | GTAC | 2 cut(s) | 86, 197 |
| RsaNI | GTAC | 2 cut(s) | 85, 196 |
| RseI | CAYNNNNRTG | 1 cut(s) | 240 |
| SatI | GCNGC | 2 cut(s) | 18, 126 |
| Sau3AI | GATC | 2 cut(s) | 58, 223 |
| SetI | ASST | 3 cut(s) | 90, 197, 201 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 240 |
| SmlI | CTYRAG | 1 cut(s) | 149 |
| SmoI | CTYRAG | 1 cut(s) | 149 |
| SnaBI | TACGTA | 1 cut(s) | 195 |
| SsiI | CCGC | 1 cut(s) | 18 |
| SspMI | CTAG | 1 cut(s) | 48 |
| TaiI | ACGT | 3 cut(s) | 90, 197, 201 |
| TauI | GCSGC | 1 cut(s) | 20 |
| TfiI | GAWTC | 1 cut(s) | 30 |
| TscAI | CASTG | 1 cut(s) | 43 |
| TseI | GCWGC | 1 cut(s) | 125 |
| TspDTI | ATGAA | 1 cut(s) | 224 |
| TspRI | CASTG | 1 cut(s) | 43 |
| XceI | RCATGY | 1 cut(s) | 245 |
| XspI | CTAG | 1 cut(s) | 48 |