RchiOBHm_Chr3g0455091

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
4945765 .. 4949386
3622 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2613 bp
ATGTTTAACAATTTCGCAAACATTCCCTCCATCCCCAAGTTCAGTGATTTGAATATCACAGCCGGAGAGAAGAAGAAGAAGATCAAGGGGAGTGTGGTGTTGATGAGAAAAAATGTTCTCGACTTCAATGACTTATCGGCTTCGGCTTTCGATACTGTGAATGAGTTGTTGAGTCAAGGCATTTCCGTGCAGCTAGTTAGTGCTACTAAAACTTATCAGTCTGCAAATGGCTTGAAAGGGAAAATTGGAAAGCCTGCATATTTGGAGAACTGGATGTTTTCACTCATTCCCCTAGCAGCAGGAGACTCTGCATTCGGGGTTAGCTTCGATTGGGATGACCAAATTGGAGTTCCTGGAGCTGTAGTAATCAAAAACAATCACACAAGTCAGTTCTTCCTCAAGAGCATCGTACTCGAAGATGTTCCGGGTGTGGGTCGGATGAACTTTGTTTGCAACTCATGGGTCTACCCTGCAAAAAATTACAAGAAAGACCGCGTTTTCTTCCTCAACAAGTCATATCTCCCAAGTGACACACCAGTGCCACTACAAAAGTATAGAGAAGAGGAACTGGTAGACTTAAGAGGAGATGGAACAGGAGAGCTCAAGGAATGGGACAGGGTTTATGACTATGCTTACTACAATGATCTCGGGGATCCAGATAGCGGCAAAGATTATGTCCGGCCAGTTCTTGGAGGGTCTAGCAAGTACCCTTACCCTCGCAGAGGAAGAACTGGGCGACCACCAACAAGGACAGATCCCAACACCGAGAGTAGGCTGATGATGATTATGACCTTAGACATGTACGCTCCAAGAGATGAAAAGTTTGGACACTTAAAGATGTCCGACTTCTTGGCTTATGCACTCAAATCCCTAGCTCAAGTCATTAGACCCCAGCTAGAAGCTTTCTTTGATGCAACGCCCAATGAGTTTGACAGCTTTGATGATGTACTCAATCTTTATGAAGGTGGATTTCCAATGCCTACAGCCTTATTAAAGAACATGAGGGAGGCTGTCCCTTTGCCAATGCTCAAGGAAATGTTCCGAACTGATGGTGAACAATTCCTCAGGTTCCCAATACCTCGAGTGATAAAAGAGGATAGGTCTGCTTGGAGGACGGATGCAGAATTTGGCAGAGAAATGGTGGCCGGAGTGAACCCTCTAATCATTCGTCGTCTCGAAGAATTTCCTCCAAAGAGCAAGCTAGATCCAAAAGTTTATGGTGATCAAACCAGTAGATTAACAGAAGAACACATAAAGAGCAACCTAGATGGACCAAGTGTGGAGGAGGCAATCAAGAACAACAAGTTATTCATACTCGACCATCATGATTCATTGATGCCATATGTGAGGCTGATAAACAAGGATACTAAGCACAAGATCTATGCTAGCAGGACTCTCCTTCTCTTGAGAAGTGATGGAACGTTGAAGCCACTGGCGATTGAGTTGAGCTTGCCTCATCCTGATAAAGATGAACTGGGCTGCACTAGCAAAGTATACACACCAGCTGAACAAGGTGTAGAAAGCTTCATATGGCAACTAGCTAAAGCTTATGTGGCTGTAAATGACTCCGGATATCATCAACTTATTAGTCACTGGTTGAAAACTCACGCAGTGATCGAGCCATTTATAATTGCTACCAACAGGCAGCTGAGTGTGCTTCACCCAATTTACAAACTTTTACATCCTCATTTCCGTGACACCATGAATATTAATGCACAAGCCAGGCAACTCCTCATCAATGCTGGTGGGATTTTGGAGATGACATGTTTTCCATCCCAGTATGCATTGGAGATGTCATCGGCGGTTTACAAGGATTGGGTTTTCCCTGAGCAAGCTCTCCCTGCAGATCTCCTCAAGAGAGGAGTGGCGGTCAAGGATGAAAGTTGTCCACACGGTCTTCGCTTACTGATAGAGGACTACCCATTTGCTGTTGATGGGCTTCAGATTTGGTCCGCAATAAAAACTTGGGTGGAAGAGTATTGCAATTTCTACTGCAAGAGTGATGACATGGTCCAAAAAGACCCTGAACTCCAGTTCTGGTGGAAGGAACTTGTAGAGAAGGGTCACGGTGACTTAAAAGACAAGCTGTGGTGGCCTAAAATGCAGACTCGCAAAGACCTAGTCGAAACATGCACTATCATCATATGGATTGCTTCAGCTCTCCATGCAGCTGTCAACTTTGGACAGTACCCTTTCGCAGGGTACCTTCCAAACCGCCCCACTGTTAGCCGAAGATTCATGCCCGAAGAAGGAACTCCTGAATATGAGGAGCTCAAGCAGAACCCTGATAAGGCTTTCTTGAAAACAATTACTGCTCAGCTTCAGACCCTGCTCGGCGTTTCCCTCATCGAAATTCTGTCCAGGCATGCTAGTGATGAGGTGTATCTGGGGCAGAGGGACAGTCTCGAGTGGACAACTGACAAGGAGGTGTTAGAAGCATTTGGGAGATTTGGGAAGAAACTGGCTGAAATAGAGAATGGAATTGAAATTAGGAACCAGAATAACAATCTGAAGAACCGAGTTGGACCGGTGAAGATGCCCTACACTTTGCTCTACCCTACTAGTGAAGAAGGACTTACTGGCAAGGGAATTCCAAACAGTATCTCGATCTGA

Protein Analysis

870

Amino Acids

99.01

Weight (kDa)

6.17

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 62 - 168 1.7e-18 PLAT/LH2 domain
Lipoxygenase PF00305 181 - 853 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1628
Acc65I GGTACC 1 cut(s) 2202
AccB1I GGYRCC 1 cut(s) 2202
AccB7I CCANNNNNTGG 1 cut(s) 689
AccI GTMKAC 3 cut(s) 465, 573, 1494
AccII CGCG 1 cut(s) 495
AccIII TCCGGA 1 cut(s) 1568
AciI CCGC 6 cut(s) 493, 663, 1802, 1868, 1953, 2215
AclI AACGTT 1 cut(s) 1421
AclWI GGATC 4 cut(s) 647, 660, 749, 1199
AcoI YGGCCR 2 cut(s) 680, 1143
AcsI RAATTY 4 cut(s) 1124, 1181, 2352, 2589
AcuI CTGAAG 4 cut(s) 1925, 2139, 2306, 2531
AdeI CACNNNGTG 1 cut(s) 1612
AfaI GTAC 6 cut(s) 411, 707, 803, 948, 2189, 2204
AfiI CCNNNNNNNGG 8 cut(s) 431, 662, 689, 722, 771, 2198, 2249, 2290
AflII CTTAAG 1 cut(s) 577
AflIII ACRYGT 2 cut(s) 798, 1763
AgeI ACCGGT 1 cut(s) 2527
AgsI TTSAA 7 cut(s) 52, 127, 235, 1426, 1600, 2302, 2486
AhlI ACTAGT 1 cut(s) 2561
AjnI CCWGG 3 cut(s) 352, 1721, 2360
AjuI GAANNNNNNNTTGG 2 cut(s) 333, 365
AleI CACNNNNGTG 1 cut(s) 536
Alw21I GWGCWC 2 cut(s) 603, 2274
Alw26I GTCTC 3 cut(s) 297, 1178, 2408
AlwI GGATC 4 cut(s) 647, 660, 749, 1199
AlwNI CAGNNNCTG 1 cut(s) 2329
Ama87I CYCGRG 3 cut(s) 647, 1080, 2405
Aor13HI TCCGGA 1 cut(s) 1568
AoxI GGCC 3 cut(s) 680, 1143, 2093
ApeKI GCWGC 5 cut(s) 190, 296, 1479, 1645, 2168
ApoI RAATTY 4 cut(s) 1124, 1181, 2352, 2589
ArsI GACNNNNNNTTYG 8 cut(s) 296, 328, 660, 692, 1907, 1939, 2106, 2138
AseI ATTAAT 1 cut(s) 1710
AsiGI ACCGGT 1 cut(s) 2527
Asp700I GAANNNNTTC 2 cut(s) 420, 1182
Asp718I GGTACC 1 cut(s) 2202
AspS9I GGNCC 4 cut(s) 1271, 1950, 2011, 2525
AsuC2I CCSGG 1 cut(s) 426
AsuHPI GGTGA 5 cut(s) 1064, 1232, 1652, 2081, 2542
AsuNHI GCTAGC 1 cut(s) 1385
AvaI CYCGRG 3 cut(s) 647, 1080, 2405
AvaII GGWCC 4 cut(s) 1271, 1950, 2011, 2525
AxyI CCTNAGG 1 cut(s) 1064
BamHI GGATCC 1 cut(s) 652
BanI GGYRCC 1 cut(s) 2202
BanII GRGCYC 2 cut(s) 603, 2274
BarI GAAGNNNNNNTAC 2 cut(s) 2525, 2557
BbsI GAAGAC 1 cut(s) 1889
Bbv12I GWGCWC 2 cut(s) 603, 2274
BbvI GCAGC 5 cut(s) 202, 308, 1466, 1657, 2180
BccI CCATC 8 cut(s) 38, 581, 1043, 1262, 1329, 1409, 1780, 1928
BcgI CGANNNNNNTGC 2 cut(s) 394, 428
BciT130I CCWGG 3 cut(s) 354, 1723, 2362
BciVI GTATCC 1 cut(s) 1357
BclI TGATCA 1 cut(s) 1222
BcnI CCSGG 1 cut(s) 426
BcoDI GTCTC 3 cut(s) 297, 1178, 2408
BcuI ACTAGT 1 cut(s) 2561
BfmI CTRYAG 3 cut(s) 360, 981, 1842
BfrI CTTAAG 1 cut(s) 577
BfuI GTATCC 1 cut(s) 1357
BglII AGATCT 2 cut(s) 1377, 1846
BisI GCNGC 6 cut(s) 191, 297, 664, 1480, 1646, 2169
BlpI GCTNAGC 1 cut(s) 2316
BlsI GCNGC 6 cut(s) 192, 298, 665, 1481, 1647, 2170
Bme1390I CCNGG 4 cut(s) 354, 426, 1723, 2362
Bme18I GGWCC 4 cut(s) 1271, 1950, 2011, 2525
BmeT110I CYCGRG 3 cut(s) 647, 1080, 2405
BmgT120I GGNCC 4 cut(s) 1271, 1950, 2011, 2525
BmiI GGNNCC 4 cut(s) 654, 1070, 2204, 2495
BmrFI CCNGG 4 cut(s) 354, 426, 1723, 2362
BmrI ACTGGG 3 cut(s) 741, 1484, 1771
BmsI GCATC 5 cut(s) 414, 901, 1108, 1326, 2526
BmtI GCTAGC 1 cut(s) 1389
BmuI ACTGGG 3 cut(s) 741, 1484, 1771
BpiI GAAGAC 1 cut(s) 1889
BplI GAGNNNNNCTC 2 cut(s) 1438, 1470
BpmI CTGGAG 2 cut(s) 375, 2015
Bpu10I CCTNAGC 1 cut(s) 1827
Bpu1102I GCTNAGC 1 cut(s) 2316
BpuEI CTTGAG 7 cut(s) 383, 587, 861, 1013, 1426, 1838, 2258
BpuMI CCSGG 1 cut(s) 426
BsaWI WCCGGW 2 cut(s) 1568, 2527
BsaXI ACNNNNNCTCC 6 cut(s) 11, 41, 348, 378, 1854, 1884
Bsc4I CCNNNNNNNGG 8 cut(s) 431, 662, 689, 722, 771, 2198, 2249, 2290
Bse118I RCCGGY 1 cut(s) 2527
Bse21I CCTNAGG 1 cut(s) 1064
BseAI TCCGGA 1 cut(s) 1568
BseBI CCWGG 3 cut(s) 354, 1723, 2362
BseGI GGATG 9 cut(s) 30, 279, 340, 444, 1123, 1456, 1681, 1772, 1882
BseLI CCNNNNNNNGG 8 cut(s) 431, 662, 689, 722, 771, 2198, 2249, 2290
BseMII CTCAG 4 cut(s) 1078, 1640, 1818, 2330
BseRI GAGGAG 6 cut(s) 597, 1298, 1721, 1841, 1875, 2282
BseXI GCAGC 5 cut(s) 202, 308, 1466, 1657, 2180
BseYI CCCAGC 1 cut(s) 891
BsgI GTGCAG 2 cut(s) 209, 1465
Bsh1236I CGCG 1 cut(s) 495
BshFI GGCC 3 cut(s) 682, 1145, 2095
BshNI GGYRCC 1 cut(s) 2202
BshTI ACCGGT 1 cut(s) 2527
BsiHKAI GWGCWC 2 cut(s) 603, 2274
BsiHKCI CYCGRG 3 cut(s) 647, 1080, 2405
BsiSI CCGG 6 cut(s) 63, 425, 679, 1146, 1569, 2528
BslFI GGGAC 3 cut(s) 626, 998, 2411
BslI CCNNNNNNNGG 8 cut(s) 431, 662, 689, 722, 771, 2198, 2249, 2290
BsmAI GTCTC 3 cut(s) 297, 1178, 2408
BsmBI CGTCTC 1 cut(s) 1178
BsmFI GGGAC 3 cut(s) 626, 998, 2411
BsmI GAATGC 1 cut(s) 311
BsnI GGCC 3 cut(s) 682, 1145, 2095
BsoBI CYCGRG 3 cut(s) 647, 1080, 2405
Bsp1286I GDGCHC 2 cut(s) 603, 2274
Bsp13I TCCGGA 1 cut(s) 1568
Bsp1720I GCTNAGC 1 cut(s) 2316
BspACI CCGC 6 cut(s) 493, 663, 1802, 1868, 1953, 2215
BspANI GGCC 3 cut(s) 682, 1145, 2095
BspCNI CTCAG 4 cut(s) 1077, 1641, 1819, 2329
BspEI TCCGGA 1 cut(s) 1568
BspFNI CGCG 1 cut(s) 495
BspHI TCATGA 1 cut(s) 1324
BspLI GGNNCC 4 cut(s) 654, 1070, 2204, 2495
BspMAI CTGCAG 1 cut(s) 1846
BspOI GCTAGC 1 cut(s) 1389
BspPI GGATC 4 cut(s) 647, 660, 749, 1199
BspT107I GGYRCC 1 cut(s) 2202
BspTI CTTAAG 1 cut(s) 577
BsrFI RCCGGY 1 cut(s) 2527
BssAI RCCGGY 1 cut(s) 2527
BssNAI GTATAC 1 cut(s) 1495
Bst1107I GTATAC 1 cut(s) 1495
Bst2UI CCWGG 3 cut(s) 354, 1723, 2362
Bst4CI ACNGT 7 cut(s) 157, 1895, 2069, 2187, 2224, 2402, 2600
Bst6I CTCTTC 2 cut(s) 555, 1968
BstAFI CTTAAG 1 cut(s) 577
BstC8I GCNNGC 6 cut(s) 255, 1199, 1387, 1451, 1833, 2367
BstDEI CTNAG 6 cut(s) 793, 1064, 1368, 1649, 1827, 2316
BstENI CCTNNNNNAGG 2 cut(s) 720, 2196
BstF5I GGATG 9 cut(s) 30, 279, 340, 444, 1123, 1456, 1681, 1772, 1882
BstFNI CGCG 1 cut(s) 495
BstMAI GTCTC 3 cut(s) 297, 1178, 2408
BstMWI GCNNNNNNNGC 7 cut(s) 1485, 1553, 1654, 1841, 2092, 2101, 2165
BstNI CCWGG 3 cut(s) 354, 1723, 2362
BstNSI RCATGY 4 cut(s) 802, 1767, 2133, 2369
BstSCI CCNGG 4 cut(s) 352, 424, 1721, 2360
BstSFI CTRYAG 3 cut(s) 360, 981, 1842
BstUI CGCG 1 cut(s) 495
BstV1I GCAGC 5 cut(s) 202, 308, 1466, 1657, 2180
BstV2I GAAGAC 1 cut(s) 1889
BstX2I RGATCY 5 cut(s) 652, 754, 1204, 1377, 1846
BstYI RGATCY 5 cut(s) 652, 754, 1204, 1377, 1846
BstZ17I GTATAC 1 cut(s) 1495
Bsu36I CCTNAGG 1 cut(s) 1064
BsuI GTATCC 1 cut(s) 1357
BsuRI GGCC 3 cut(s) 682, 1145, 2095
BtsCI GGATG 9 cut(s) 30, 279, 340, 444, 1123, 1456, 1681, 1772, 1882
BtsI GCAGTG 1 cut(s) 1617
BtsIMutI CAGTG 6 cut(s) 49, 543, 1430, 1591, 1617, 2220
Cac8I GCNNGC 6 cut(s) 255, 1199, 1387, 1451, 1833, 2367
CaiI CAGNNNCTG 1 cut(s) 2329
CciI TCATGA 1 cut(s) 1324
Cfr10I RCCGGY 1 cut(s) 2527
Cfr13I GGNCC 4 cut(s) 1271, 1950, 2011, 2525
Csp6I GTAC 6 cut(s) 410, 706, 802, 947, 2188, 2203
CspAI ACCGGT 1 cut(s) 2527
CspCI CAANNNNNGTGG 2 cut(s) 1726, 1761
CviQI GTAC 6 cut(s) 410, 706, 802, 947, 2188, 2203
DdeI CTNAG 6 cut(s) 793, 1064, 1368, 1649, 1827, 2316
DraIII CACNNNGTG 1 cut(s) 1612
EaeI YGGCCR 2 cut(s) 680, 1143
Eam1104I CTCTTC 2 cut(s) 555, 1968
EarI CTCTTC 2 cut(s) 555, 1968
Ecl136II GAGCTC 2 cut(s) 601, 2272
Eco24I GRGCYC 2 cut(s) 603, 2274
Eco32I GATATC 1 cut(s) 1574
Eco47I GGWCC 4 cut(s) 1271, 1950, 2011, 2525
Eco53kI GAGCTC 2 cut(s) 601, 2272
Eco57I CTGAAG 4 cut(s) 1925, 2139, 2306, 2531
Eco81I CCTNAGG 1 cut(s) 1064
Eco88I CYCGRG 3 cut(s) 647, 1080, 2405
EcoICRI GAGCTC 2 cut(s) 601, 2272
EcoNI CCTNNNNNAGG 2 cut(s) 720, 2196
EcoRI GAATTC 1 cut(s) 2589
EcoRII CCWGG 3 cut(s) 352, 1721, 2360
EcoRV GATATC 1 cut(s) 1574
EcoT22I ATGCAT 1 cut(s) 1786
EcoT38I GRGCYC 2 cut(s) 603, 2274
Esp3I CGTCTC 1 cut(s) 1178
FalI AAGNNNNNCTT 4 cut(s) 2282, 2314, 2559, 2591
FaqI GGGAC 3 cut(s) 626, 998, 2411
FauNDI CATATG 3 cut(s) 1342, 1529, 2144
FbaI TGATCA 1 cut(s) 1222
FblI GTMKAC 3 cut(s) 465, 573, 1494
Fnu4HI GCNGC 6 cut(s) 191, 297, 664, 1480, 1646, 2169
FokI GGATG 9 cut(s) 17, 286, 347, 451, 1130, 1443, 1668, 1759, 1889
FriOI GRGCYC 2 cut(s) 603, 2274
Fsp4HI GCNGC 6 cut(s) 191, 297, 664, 1480, 1646, 2169
GluI GCNGC 6 cut(s) 191, 297, 664, 1480, 1646, 2169
GsaI CCCAGC 1 cut(s) 895
GsuI CTGGAG 2 cut(s) 375, 2015
HaeIII GGCC 3 cut(s) 682, 1145, 2095
HapII CCGG 6 cut(s) 63, 425, 679, 1146, 1569, 2528
HincII GTYRAC 1 cut(s) 2176
HindII GTYRAC 1 cut(s) 2176
HindIII AAGCTT 3 cut(s) 900, 1522, 1545
HinfI GANTC 7 cut(s) 172, 305, 1328, 1393, 1565, 2107, 2235
HpaII CCGG 6 cut(s) 63, 425, 679, 1146, 1569, 2528
HphI GGTGA 5 cut(s) 1064, 1232, 1652, 2081, 2542
Hpy166II GTNNAC 9 cut(s) 466, 574, 1055, 1153, 1495, 1807, 1889, 2176, 2412
Hpy188I TCNGA 7 cut(s) 438, 844, 1043, 1944, 2325, 2511, 2612
Hpy8I GTNNAC 9 cut(s) 466, 574, 1055, 1153, 1495, 1807, 1889, 2176, 2412
Hpy99I CGWCG 1 cut(s) 1173
HpyAV CCTTC 7 cut(s) 956, 1409, 2038, 2053, 2216, 2243, 2564
HpyCH4III ACNGT 7 cut(s) 157, 1895, 2069, 2187, 2224, 2402, 2600
HpyCH4IV ACGT 1 cut(s) 1421
HpyF10VI GCNNNNNNNGC 7 cut(s) 1485, 1553, 1654, 1841, 2092, 2101, 2165
HpyF3I CTNAG 6 cut(s) 793, 1064, 1368, 1649, 1827, 2316
HpySE526I ACGT 1 cut(s) 1421
Kpn2I TCCGGA 1 cut(s) 1568
KpnI GGTACC 1 cut(s) 2206
Ksp22I TGATCA 1 cut(s) 1222
LmnI GCTCC 3 cut(s) 356, 811, 2269
Lsp1109I GCAGC 5 cut(s) 202, 308, 1466, 1657, 2180
LweI GCATC 5 cut(s) 414, 901, 1108, 1326, 2526
MaeII ACGT 1 cut(s) 1421
MaeIII GTNAC 5 cut(s) 527, 1589, 1694, 2063, 2069
MflI RGATCY 5 cut(s) 652, 754, 1204, 1377, 1846
MhlI GDGCHC 2 cut(s) 603, 2274
MlyI GAGTC 5 cut(s) 181, 299, 1387, 1559, 2101
MmeI TCCRAC 3 cut(s) 416, 867, 2503
Mph1103I ATGCAT 1 cut(s) 1786
MroI TCCGGA 1 cut(s) 1568
MroXI GAANNNNTTC 2 cut(s) 420, 1182
MseI TTAA 7 cut(s) 6, 578, 833, 992, 1238, 1710, 2075
MslI CAYNNNNRTG 4 cut(s) 185, 536, 1692, 2370
MspA1I CMGCKG 3 cut(s) 1505, 1648, 2171
MspCI CTTAAG 1 cut(s) 577
MspI CCGG 6 cut(s) 63, 425, 679, 1146, 1569, 2528
MspR9I CCNGG 4 cut(s) 354, 426, 1723, 2362
Mva1269I GAATGC 1 cut(s) 311
MvaI CCWGG 3 cut(s) 354, 1723, 2362
MvnI CGCG 1 cut(s) 495
MwoI GCNNNNNNNGC 7 cut(s) 1485, 1553, 1654, 1841, 2092, 2101, 2165
NciI CCSGG 1 cut(s) 426
NdeI CATATG 3 cut(s) 1342, 1529, 2144
NheI GCTAGC 1 cut(s) 1385
NlaIV GGNNCC 4 cut(s) 654, 1070, 2204, 2495
NmeAIII GCCGAG 1 cut(s) 2313
NmuCI GTSAC 5 cut(s) 527, 1589, 1694, 2063, 2069
NsiI ATGCAT 1 cut(s) 1786
NspI RCATGY 4 cut(s) 802, 1767, 2133, 2369
OliI CACNNNNGTG 1 cut(s) 536
PaeI GCATGC 1 cut(s) 2369
PaeR7I CTCGAG 2 cut(s) 1080, 2405
PagI TCATGA 1 cut(s) 1324
PciI ACATGT 2 cut(s) 798, 1763
PcsI WCGNNNNNNNCGW 1 cut(s) 1614
PctI GAATGC 1 cut(s) 311
PdmI GAANNNNTTC 2 cut(s) 420, 1182
PfeI GAWTC 2 cut(s) 1328, 2235
PflFI GACNNNGTC 2 cut(s) 2009, 2120
PflMI CCANNNNNTGG 1 cut(s) 689
PfoI TCCNGGA 1 cut(s) 352
PinAI ACCGGT 1 cut(s) 2527
PkrI GCNGC 6 cut(s) 192, 298, 665, 1481, 1647, 2170
PleI GAGTC 5 cut(s) 180, 299, 1387, 1559, 2101
PpsI GAGTC 5 cut(s) 180, 299, 1387, 1559, 2101
PscI ACATGT 2 cut(s) 798, 1763
PshBI ATTAAT 1 cut(s) 1710
PsiI TTATAA 1 cut(s) 1628
Psp124BI GAGCTC 2 cut(s) 603, 2274
Psp1406I AACGTT 1 cut(s) 1421
Psp6I CCWGG 3 cut(s) 352, 1721, 2360
PspFI CCCAGC 1 cut(s) 891
PspGI CCWGG 3 cut(s) 352, 1721, 2360
PspN4I GGNNCC 4 cut(s) 654, 1070, 2204, 2495
PspPI GGNCC 4 cut(s) 1271, 1950, 2011, 2525
PspXI VCTCGAGB 1 cut(s) 1080
PstI CTGCAG 1 cut(s) 1846
PstNI CAGNNNCTG 1 cut(s) 2329
PsuI RGATCY 5 cut(s) 652, 754, 1204, 1377, 1846
PsyI GACNNNGTC 2 cut(s) 2009, 2120
PvuII CAGCTG 3 cut(s) 1505, 1648, 2171
RsaI GTAC 6 cut(s) 411, 707, 803, 948, 2189, 2204
RsaNI GTAC 6 cut(s) 410, 706, 802, 947, 2188, 2203
RseI CAYNNNNRTG 4 cut(s) 185, 536, 1692, 2370
SacI GAGCTC 2 cut(s) 603, 2274
SaqAI TTAA 7 cut(s) 6, 578, 833, 992, 1238, 1710, 2075
SatI GCNGC 6 cut(s) 191, 297, 664, 1480, 1646, 2169
Sau96I GGNCC 4 cut(s) 1271, 1950, 2011, 2525
SchI GAGTC 5 cut(s) 181, 299, 1387, 1559, 2101
ScrFI CCNGG 4 cut(s) 354, 426, 1723, 2362
SduI GDGCHC 2 cut(s) 603, 2274
SfaNI GCATC 5 cut(s) 414, 901, 1108, 1326, 2526
SfcI CTRYAG 3 cut(s) 360, 981, 1842
Sfr274I CTCGAG 2 cut(s) 1080, 2405
SinI GGWCC 4 cut(s) 1271, 1950, 2011, 2525
SlaI CTCGAG 2 cut(s) 1080, 2405
SmiMI CAYNNNNRTG 4 cut(s) 185, 536, 1692, 2370
SpeI ACTAGT 1 cut(s) 2561
SphI GCATGC 1 cut(s) 2369
SsiI CCGC 6 cut(s) 493, 663, 1802, 1868, 1953, 2215
SspI AATATT 1 cut(s) 1708
SstI GAGCTC 2 cut(s) 603, 2274
StyD4I CCNGG 4 cut(s) 352, 424, 1721, 2360
TaaI ACNGT 7 cut(s) 157, 1895, 2069, 2187, 2224, 2402, 2600
TaiI ACGT 1 cut(s) 1424
TatI WGTACW 1 cut(s) 946
TauI GCSGC 1 cut(s) 666
TfiI GAWTC 2 cut(s) 1328, 2235
Tru1I TTAA 7 cut(s) 6, 578, 833, 992, 1238, 1710, 2075
Tru9I TTAA 7 cut(s) 6, 578, 833, 992, 1238, 1710, 2075
TscAI CASTG 6 cut(s) 49, 543, 1437, 1598, 1617, 2227
TseFI GTSAC 5 cut(s) 527, 1589, 1694, 2063, 2069
TseI GCWGC 5 cut(s) 190, 296, 1479, 1645, 2168
Tsp45I GTSAC 5 cut(s) 527, 1589, 1694, 2063, 2069
TspGWI ACGGA 3 cut(s) 175, 1130, 1682
TspRI CASTG 6 cut(s) 49, 543, 1437, 1598, 1617, 2227
Tth111I GACNNNGTC 2 cut(s) 2009, 2120
Van91I CCANNNNNTGG 1 cut(s) 689
Vha464I CTTAAG 1 cut(s) 577
VpaK11BI GGWCC 4 cut(s) 1271, 1950, 2011, 2525
VspI ATTAAT 1 cut(s) 1710
XagI CCTNNNNNAGG 2 cut(s) 720, 2196
XapI RAATTY 4 cut(s) 1124, 1181, 2352, 2589
XceI RCATGY 4 cut(s) 802, 1767, 2133, 2369
XhoI CTCGAG 2 cut(s) 1080, 2405
XmiI GTMKAC 3 cut(s) 465, 573, 1494
XmnI GAANNNNTTC 2 cut(s) 420, 1182
Zsp2I ATGCAT 1 cut(s) 1786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.