Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001514

Physical Location & Seq

Genomic Coordinates Forward (+)

17328292 .. 17333382

Gene Structure 5091 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGAGGCCCTTCACCTTAGCTCAGTTCAGTCCCGTATTCTCGCACCAAAACGGTTTGAATCATTCCCTCTCGGGACACAAAAGGTTAGCACACGCCGTCCCAACAATCCATTGTTCATCACTGCCACATTGTCCCGACCAACAGCTGAGATTTCCGCTGAACCCTCCTCGTCCTCTGCATCTAGCCTGCCTCACCTCCTGACTTCGTCATCGCCTCCCAATCGGGTCTCTACTAGTTCCTTACAGTATGAACAAGGTTTTCTTGGGGCAGTACCTGACCGTACAGTTGCTAATGGAAACAACGACATCGTTGACGCTCTGGGATCTTTGACAAACATATTGACGTCAAAAGTGTATGACGTGGCAATTGAATCGCCTTTGGAGCTGGCAACCAAGCTATCCGAGCGGTTGGGAGTGAACATTTGGCTCAAAAGGGAAGATTTGCAGCCGGTGTTTTCGTTCAAGCTTCGTGGAGCTTATAATATGATGGCTAAGATTCCAAGGGAACAATTGGACAGAGGAGTTATATGCTCGTCGGCTGGGAACCATGCACAAGGAGTTGCATTGTCCGCCAAGAAATTGGGTTGCAATGCAGTCATTGCAATGCCGGTAACTACTCCAGAAATTAAGTGGCAATCTGTGGAGAGATTGGGAGCCACAGTTGTACTTATAGGTGATTCCTATGATGAGGCTCAAGCTTATGCTAAGAAGCGAGCTAAGGAGGAGGGACGGAGCTTCATACCTCCTTTTGATCACCCAGACATTATTATGGGTCAGGGAACAGTTGGAATGGAGGTTATGCGTCAAACAAAAGAGCCATTGCATGCAATTTTTGTGCCGGTTGGGGGTGGTGGCCTAATAGCTGGTATTGCCGCATACGTTAAGAGGCTGTCTCCAGAGGTAAAGATTATTGGTGTGGAGCCCTCGGATGCGAATGCAATGGCATTATCCTTGCATCACGGAGAGAGAATAATGTTGGACCAAGTTGGAGGTTTTGCAGATGGTGTAGCAGTGAAAGAGGTGGGTGAAGAAACCTTTCGGATATGCAAAGAATTGATAGATGGTGTAGTTCTCGTGAGTCGTGACGCCATCTGTGGTTCAATAAAGGATATGTTTGAGGAGACTAGAAGCATTTTAGAACCAGCAGGTGCTCTTGCTCTTGCTGGAGCTGAAGCATACTGCAAGTATTATGGTCTTAAAGGAGAAAATGTTGTTGCAATTACCAGCGGGGCAAATATGAACTTTGATAAACTGAGAGTGGTGACTGAACTCGCGAATGTTGGTCGGCAACAAGAGGCTGTACTCGCAACAGTTATGCCAGAGGTGCCTGGGAGCTTTAAACATTTCTGTGAGCTGGTCGGCCCAATGAATATTAGTGAATTCAAATACAGATATAACTCTGATAAAAAGGCTGTCGTACTGTACAGTGTTGGTGTGCACACAGCTTCTGAACTTGAAGCAATGCAAGAGCGCTTGGAGTCTTCTCAACTCAAAACGATCAATCTCACGAAAAGTGACTTGGTTAAAGATCACTTGCGTTACTTGATGGGGGGCAGAACAAATGTTGAAAATGAGGTTCTTTGTCGCTTTGTCTTCCCAGAAAGGCCTGGTGCTTTGATGAAGTTCTTGGACACCTTTAGTCCACGTTGGAATATTAGTTTGTTCCACTACCGCGGACAGGGTGAAACTGGGGCAAATGTCTTGGTTGGAATCCAAGTTTCCAAGAGCAAGATTGATGAGTTCCATTCGCGTGCCAATTCACTTGGGTATGACTATGTAGTAGTGACCAATGATATAGACTTCGAGCTTTTGATGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004794 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006549 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009097 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016829 GO:0016840 GO:0016841 GO:0019752 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00290 ko01100 ko01110 ko01130 ko01200 ko01230 map00260 map00290 map01100 map01110 map01130 map01200 map01230

Pfam Domains

Protein Families

PALP Thr_dehydrat_C

Protein Analysis

606

Amino Acids

66.17

Weight (kDa)

6.27

Isoelectric Point (pI)

41.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PALP	PF00291	124 - 410	1.5e-79	Pyridoxal-phosphate dependent enzyme
Thr_dehydrat_C	PF00585	423 - 512	2e-22	C-terminal regulatory domain of Threonine dehydratase
Thr_dehydrat_C	PF00585	518 - 601	7.5e-23	C-terminal regulatory domain of Threonine dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001514)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10050
fragaria_vesca	FvH4_3g30040 FvH4_6g17350 FvH4_6g17350 FvH4_6g17350
malus_domestica	MD11G1153900.v1.1 MD12G1101800.v1.1 MD14G1095900.v1.1
prunus_persica	Prupe.1G149200_v2.0.a1 Prupe.6G116600_v2.0.a1 Prupe.7G044100_v2.0.a1 Prupe.7G122000_v2.0.a1
pyrus_communis	pycom11g12560 pycom11g12570 pycom12g10020
rosa_chinensis	RchiOBHm_Chr3g0471501 RchiOBHm_Chr4g0394271 RchiOBHm_Chr5g0055901
rosa_laevigata	RLG00000009710 RLG00000024173 RLG00000035019 RLG00000035020
rosa_multiflora	Rmu_co8179734.1_g000001 Rmu_sc0006582.1_g000005 Rmu_sc0006749.1_g000006
rosa_roxburghii	Rroxscaffold_1G00024450 Rroxscaffold_1G00024460 Rroxscaffold_6G00409900
rosa_rugosa	Rorug03G0118100 Rorug03G0118200 Rorug03G0118200 Rorug03G0118200 Rorug03G0368200.1 Rorug05G0295400
rosa_samantha	Rh3AG168100 Rh3BG193600 Rh3CG184100 Rh3DG181900 Rh4AG051200 Rh4BG048200 Rh4BG048400 Rh4CG055000 Rh4DG048100 Rh5AG366800 Rh5BG376900 Rh5CG400200 Rh5DG390400 Rh6BG174900
rosa_wichuraiana	Rw3G015840 Rw4G004080 Rw5G034380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	480
AarI	CACCTGC	1 cut(s)	1136
AatII	GACGTC	1 cut(s)	347
Acc36I	ACCTGC	1 cut(s)	1136
AccB1I	GGYRCC	1 cut(s)	1324
AccBSI	CCGCTC	1 cut(s)	406
AccII	CGCG	3 cut(s)	1274, 1674, 1750
AciI	CCGC	7 cut(s)	156, 406, 570, 873, 1227, 1672, 1674
AclWI	GGATC	1 cut(s)	331
AcsI	RAATTY	1 cut(s)	1379
AcuI	CTGAAG	1 cut(s)	1191
AcyI	GRCGYC	2 cut(s)	344, 1086
AfaI	GTAC	6 cut(s)	273, 283, 666, 1302, 1419, 1424
AfeI	AGCGCT	1 cut(s)	1472
AfiI	CCNNNNNNNGG	2 cut(s)	845, 1678
AgsI	TTSAA	7 cut(s)	59, 371, 463, 1101, 1384, 1457, 1568
AhlI	ACTAGT	1 cut(s)	233
AjiI	CACGTC	1 cut(s)	361
AjnI	CCWGG	2 cut(s)	1327, 1606
AjuI	GAANNNNNNNTTGG	2 cut(s)	1502, 1534
Alw21I	GWGCWC	2 cut(s)	1153, 1440
Alw26I	GTCTC	3 cut(s)	232, 897, 1115
Alw44I	GTGCAC	1 cut(s)	1436
AlwI	GGATC	1 cut(s)	331
AlwNI	CAGNNNCTG	2 cut(s)	275, 1448
Ama87I	CYCGRG	1 cut(s)	71
Aor51HI	AGCGCT	1 cut(s)	1472
AoxI	GGCC	4 cut(s)	6, 853, 1360, 1604
ApaLI	GTGCAC	1 cut(s)	1436
ApeKI	GCWGC	1 cut(s)	445
ApoI	RAATTY	1 cut(s)	1379
Asp700I	GAANNNNTTC	1 cut(s)	1035
AspLEI	GCGC	1 cut(s)	1473
AspS9I	GGNCC	3 cut(s)	7, 979, 1361
AsuHPI	GGTGA	7 cut(s)	5, 185, 686, 746, 1037, 1273, 1694
AvaI	CYCGRG	1 cut(s)	71
AvaII	GGWCC	1 cut(s)	979
BaeGI	GKGCMC	1 cut(s)	1440
BanI	GGYRCC	1 cut(s)	1324
BanII	GRGCYC	1 cut(s)	924
BauI	CACGAG	1 cut(s)	1073
BbsI	GAAGAC	2 cut(s)	1473, 1585
Bbv12I	GWGCWC	2 cut(s)	1153, 1440
BbvI	GCAGC	1 cut(s)	457
BccI	CCATC	5 cut(s)	481, 995, 1055, 1097, 1540
BceAI	ACGGC	1 cut(s)	81
BcgI	CGANNNNNNTGC	2 cut(s)	354, 388
BciT130I	CCWGG	2 cut(s)	1329, 1608
BclI	TGATCA	1 cut(s)	751
BcoDI	GTCTC	3 cut(s)	232, 897, 1115
BcuI	ACTAGT	1 cut(s)	233
BfaI	CTAG	3 cut(s)	183, 234, 1125
BfoI	RGCGCY	1 cut(s)	1474
BfuAI	ACCTGC	1 cut(s)	1136
BisI	GCNGC	2 cut(s)	446, 873
BlsI	GCNGC	2 cut(s)	447, 874
Bme1390I	CCNGG	2 cut(s)	1329, 1608
Bme18I	GGWCC	1 cut(s)	979
BmeT110I	CYCGRG	1 cut(s)	71
BmgBI	CACGTC	1 cut(s)	361
BmgT120I	GGNCC	3 cut(s)	7, 979, 1361
BmiI	GGNNCC	4 cut(s)	545, 655, 921, 1326
BmrFI	CCNGG	2 cut(s)	1329, 1608
BmrI	ACTGGG	1 cut(s)	1698
BmsI	GCATC	4 cut(s)	188, 919, 964, 1803
BmuI	ACTGGG	1 cut(s)	1698
BpiI	GAAGAC	2 cut(s)	1473, 1585
BplI	GAGNNNNNCTC	2 cut(s)	877, 909
BpmI	CTGGAG	3 cut(s)	603, 879, 1185
Bpu10I	CCTNAGC	2 cut(s)	17, 717
BpuEI	CTTGAG	1 cut(s)	678
BsaHI	GRCGYC	2 cut(s)	344, 1086
BsaI	GGTCTC	1 cut(s)	232
BsaJI	CCNNGG	4 cut(s)	500, 924, 1328, 1672
BsaXI	ACNNNNNCTCC	4 cut(s)	645, 675, 1194, 1224
Bsc4I	CCNNNNNNNGG	2 cut(s)	845, 1678
Bse118I	RCCGGY	3 cut(s)	448, 607, 838
Bse1I	ACTGG	1 cut(s)	1693
Bse3DI	GCAATG	6 cut(s)	595, 597, 609, 818, 945, 1467
BseBI	CCWGG	2 cut(s)	1329, 1608
BseDI	CCNNGG	4 cut(s)	500, 924, 1328, 1672
BseGI	GGATG	1 cut(s)	934
BseLI	CCNNNNNNNGG	2 cut(s)	845, 1678
BseMI	GCAATG	6 cut(s)	595, 597, 609, 818, 945, 1467
BseMII	CTCAG	3 cut(s)	36, 138, 1244
BseNI	ACTGG	1 cut(s)	1693
BseRI	GAGGAG	4 cut(s)	157, 534, 737, 1133
BseSI	GKGCMC	1 cut(s)	1440
BseXI	GCAGC	1 cut(s)	457
BseYI	CCCAGC	1 cut(s)	539
Bsh1236I	CGCG	3 cut(s)	1274, 1674, 1750
BshFI	GGCC	4 cut(s)	8, 855, 1362, 1606
BshNI	GGYRCC	1 cut(s)	1324
BsiHKAI	GWGCWC	2 cut(s)	1153, 1440
BsiHKCI	CYCGRG	1 cut(s)	71
BsiSI	CCGG	3 cut(s)	449, 608, 839
BslFI	GGGAC	5 cut(s)	16, 84, 88, 118, 741
BslI	CCNNNNNNNGG	2 cut(s)	845, 1678
BsmAI	GTCTC	3 cut(s)	232, 897, 1115
BsmFI	GGGAC	5 cut(s)	16, 84, 88, 118, 741
BsmI	GAATGC	1 cut(s)	940
BsnI	GGCC	4 cut(s)	8, 855, 1362, 1606
Bso31I	GGTCTC	1 cut(s)	232
BsoBI	CYCGRG	1 cut(s)	71
Bsp1286I	GDGCHC	3 cut(s)	924, 1153, 1440
Bsp1407I	TGTACA	1 cut(s)	1422
Bsp143I	GATC	4 cut(s)	323, 751, 1497, 1528
Bsp68I	TCGCGA	1 cut(s)	1274
BspACI	CCGC	7 cut(s)	156, 406, 570, 873, 1227, 1672, 1674
BspANI	GGCC	4 cut(s)	8, 855, 1362, 1606
BspCNI	CTCAG	3 cut(s)	35, 139, 1245
BspFNI	CGCG	3 cut(s)	1274, 1674, 1750
BspLI	GGNNCC	4 cut(s)	545, 655, 921, 1326
BspMI	ACCTGC	1 cut(s)	1136
BspPI	GGATC	1 cut(s)	331
BspT107I	GGYRCC	1 cut(s)	1324
BspTNI	GGTCTC	1 cut(s)	232
BsrBI	CCGCTC	1 cut(s)	406
BsrDI	GCAATG	6 cut(s)	595, 597, 609, 818, 945, 1467
BsrFI	RCCGGY	3 cut(s)	448, 607, 838
BsrGI	TGTACA	1 cut(s)	1422
BsrI	ACTGG	1 cut(s)	1693
BssAI	RCCGGY	3 cut(s)	448, 607, 838
BssECI	CCNNGG	4 cut(s)	500, 924, 1328, 1672
BssMI	GATC	4 cut(s)	323, 751, 1497, 1528
BssNI	GRCGYC	2 cut(s)	344, 1086
BssSI	CACGAG	1 cut(s)	1073
BssT1I	CCWWGG	1 cut(s)	500
Bst2BI	CACGAG	1 cut(s)	1073
Bst2UI	CCWGG	2 cut(s)	1329, 1608
Bst4CI	ACNGT	9 cut(s)	54, 246, 281, 286, 661, 784, 1312, 1422, 1427
BstACI	GRCGYC	2 cut(s)	344, 1086
BstAPI	GCANNNNNTGC	1 cut(s)	599
BstAUI	TGTACA	1 cut(s)	1422
BstC8I	GCNNGC	5 cut(s)	188, 387, 714, 825, 1752
BstDEI	CTNAG	7 cut(s)	17, 22, 147, 492, 705, 717, 1253
BstDSI	CCRYGG	1 cut(s)	1672
BstF5I	GGATG	1 cut(s)	934
BstFNI	CGCG	3 cut(s)	1274, 1674, 1750
BstH2I	RGCGCY	1 cut(s)	1474
BstHHI	GCGC	1 cut(s)	1473
BstKTI	GATC	4 cut(s)	326, 754, 1500, 1531
BstMAI	GTCTC	3 cut(s)	232, 897, 1115
BstMBI	GATC	4 cut(s)	323, 751, 1497, 1528
BstMWI	GCNNNNNNNGC	8 cut(s)	382, 403, 569, 599, 869, 1304, 1324, 1813
BstNI	CCWGG	2 cut(s)	1329, 1608
BstNSI	RCATGY	1 cut(s)	827
BstSCI	CCNGG	2 cut(s)	1327, 1606
BstSLI	GKGCMC	1 cut(s)	1440
BstUI	CGCG	3 cut(s)	1274, 1674, 1750
BstV1I	GCAGC	1 cut(s)	457
BstV2I	GAAGAC	2 cut(s)	1473, 1585
BstX2I	RGATCY	1 cut(s)	323
BstXI	CCANNNNNNTGG	1 cut(s)	580
BstYI	RGATCY	1 cut(s)	323
BsuRI	GGCC	4 cut(s)	8, 855, 1362, 1606
BtgI	CCRYGG	1 cut(s)	1672
BtgZI	GCGATG	1 cut(s)	195
BtrI	CACGTC	1 cut(s)	361
BtsCI	GGATG	1 cut(s)	934
BtsI	GCAGTG	2 cut(s)	120, 1017
BtsIMutI	CAGTG	3 cut(s)	120, 1017, 1432
BtuMI	TCGCGA	1 cut(s)	1274
BveI	ACCTGC	1 cut(s)	1136
Cac8I	GCNNGC	5 cut(s)	188, 387, 714, 825, 1752
CaiI	CAGNNNCTG	2 cut(s)	275, 1448
CfoI	GCGC	1 cut(s)	1473
Cfr10I	RCCGGY	3 cut(s)	448, 607, 838
Cfr13I	GGNCC	3 cut(s)	7, 979, 1361
Cfr42I	CCGCGG	1 cut(s)	1675
CseI	GACGC	3 cut(s)	323, 791, 1094
Csp6I	GTAC	6 cut(s)	272, 282, 665, 1301, 1418, 1423
CspCI	CAANNNNNGTGG	2 cut(s)	451, 486
CviAII	CATG	2 cut(s)	548, 824
CviQI	GTAC	6 cut(s)	272, 282, 665, 1301, 1418, 1423
DdeI	CTNAG	7 cut(s)	17, 22, 147, 492, 705, 717, 1253
DpnI	GATC	4 cut(s)	325, 753, 1499, 1530
DpnII	GATC	4 cut(s)	323, 751, 1497, 1528
DraI	TTTAAA	1 cut(s)	1339
EciI	GGCGGA	1 cut(s)	559
Eco130I	CCWWGG	1 cut(s)	500
Eco147I	AGGCCT	1 cut(s)	1606
Eco24I	GRGCYC	1 cut(s)	924
Eco31I	GGTCTC	1 cut(s)	232
Eco47I	GGWCC	1 cut(s)	979
Eco47III	AGCGCT	1 cut(s)	1472
Eco57I	CTGAAG	1 cut(s)	1191
Eco88I	CYCGRG	1 cut(s)	71
EcoO109I	RGGNCCY	1 cut(s)	7
EcoRI	GAATTC	1 cut(s)	1379
EcoRII	CCWGG	2 cut(s)	1327, 1606
EcoT14I	CCWWGG	1 cut(s)	500
EcoT22I	ATGCAT	1 cut(s)	1818
EcoT38I	GRGCYC	1 cut(s)	924
ErhI	CCWWGG	1 cut(s)	500
FaeI	CATG	2 cut(s)	551, 827
FalI	AAGNNNNNCTT	2 cut(s)	246, 278
FaqI	GGGAC	5 cut(s)	16, 84, 88, 118, 741
FatI	CATG	2 cut(s)	547, 823
FauI	CCCGC	1 cut(s)	1220
FbaI	TGATCA	1 cut(s)	751
Fnu4HI	GCNGC	2 cut(s)	446, 873
FokI	GGATG	1 cut(s)	941
FriOI	GRGCYC	1 cut(s)	924
Fsp4HI	GCNGC	2 cut(s)	446, 873
FspBI	CTAG	3 cut(s)	183, 234, 1125
GlaI	GCGC	1 cut(s)	1472
GluI	GCNGC	2 cut(s)	446, 873
GsaI	CCCAGC	1 cut(s)	543
GsuI	CTGGAG	3 cut(s)	603, 879, 1185
HaeII	RGCGCY	1 cut(s)	1474
HaeIII	GGCC	4 cut(s)	8, 855, 1362, 1606
HapII	CCGG	3 cut(s)	449, 608, 839
HgaI	GACGC	3 cut(s)	323, 791, 1094
HhaI	GCGC	1 cut(s)	1473
Hin1I	GRCGYC	2 cut(s)	344, 1086
Hin1II	CATG	2 cut(s)	551, 827
Hin6I	GCGC	1 cut(s)	1471
HinP1I	GCGC	1 cut(s)	1471
HincII	GTYRAC	1 cut(s)	313
HindII	GTYRAC	1 cut(s)	313
HindIII	AAGCTT	2 cut(s)	464, 696
HinfI	GANTC	7 cut(s)	59, 371, 496, 677, 1078, 1478, 1710
HpaII	CCGG	3 cut(s)	449, 608, 839
HphI	GGTGA	7 cut(s)	5, 185, 686, 746, 1037, 1273, 1694
Hpy166II	GTNNAC	4 cut(s)	313, 418, 1438, 1643
Hpy188I	TCNGA	5 cut(s)	403, 928, 1041, 1402, 1450
Hpy188III	TCNNGA	9 cut(s)	73, 135, 199, 620, 896, 1075, 1082, 1273, 1507
Hpy8I	GTNNAC	4 cut(s)	313, 418, 1438, 1643
Hpy99I	CGWCG	1 cut(s)	538
HpyAV	CCTTC	1 cut(s)	20
HpyCH4III	ACNGT	9 cut(s)	54, 246, 281, 286, 661, 784, 1312, 1422, 1427
HpyCH4IV	ACGT	4 cut(s)	344, 360, 879, 1645
HpyF10VI	GCNNNNNNNGC	8 cut(s)	382, 403, 569, 599, 869, 1304, 1324, 1813
HpyF3I	CTNAG	7 cut(s)	17, 22, 147, 492, 705, 717, 1253
HpySE526I	ACGT	4 cut(s)	344, 360, 879, 1645
Hsp92I	GRCGYC	2 cut(s)	344, 1086
Hsp92II	CATG	2 cut(s)	551, 827
HspAI	GCGC	1 cut(s)	1471
Ksp22I	TGATCA	1 cut(s)	751
KspI	CCGCGG	1 cut(s)	1675
Kzo9I	GATC	4 cut(s)	323, 751, 1497, 1528
LmnI	GCTCC	7 cut(s)	382, 473, 653, 732, 919, 1166, 1332
Lsp1109I	GCAGC	1 cut(s)	457
LweI	GCATC	4 cut(s)	188, 919, 964, 1803
MaeI	CTAG	3 cut(s)	183, 234, 1125
MaeII	ACGT	4 cut(s)	344, 360, 879, 1645
MaeIII	GTNAC	6 cut(s)	610, 1082, 1261, 1514, 1538, 1783
MalI	GATC	4 cut(s)	325, 753, 1499, 1530
MbiI	CCGCTC	1 cut(s)	406
MboI	GATC	4 cut(s)	323, 751, 1497, 1528
MboII	GAAGA	4 cut(s)	449, 1040, 1473, 1585
MfeI	CAATTG	2 cut(s)	366, 509
MflI	RGATCY	1 cut(s)	323
MhlI	GDGCHC	3 cut(s)	924, 1153, 1440
MluCI	AATT	9 cut(s)	366, 509, 578, 624, 828, 1052, 1218, 1379, 1756
MlyI	GAGTC	2 cut(s)	1087, 1487
MmeI	TCCRAC	5 cut(s)	766, 957, 967, 1628, 1687
Mph1103I	ATGCAT	1 cut(s)	1818
MroXI	GAANNNNTTC	1 cut(s)	1035
MseI	TTAA	5 cut(s)	627, 882, 1197, 1338, 1524
MslI	CAYNNNNRTG	4 cut(s)	602, 767, 1347, 1749
MspA1I	CMGCKG	4 cut(s)	146, 158, 1227, 1674
MspI	CCGG	3 cut(s)	449, 608, 839
MspR9I	CCNGG	2 cut(s)	1329, 1608
MunI	CAATTG	2 cut(s)	366, 509
Mva1269I	GAATGC	1 cut(s)	940
MvaI	CCWGG	2 cut(s)	1329, 1608
MvnI	CGCG	3 cut(s)	1274, 1674, 1750
MwoI	GCNNNNNNNGC	8 cut(s)	382, 403, 569, 599, 869, 1304, 1324, 1813
NdeII	GATC	4 cut(s)	323, 751, 1497, 1528
NlaIII	CATG	2 cut(s)	551, 827
NlaIV	GGNNCC	4 cut(s)	545, 655, 921, 1326
NmuCI	GTSAC	4 cut(s)	1082, 1261, 1514, 1783
NruI	TCGCGA	1 cut(s)	1274
NsiI	ATGCAT	1 cut(s)	1818
NspI	RCATGY	1 cut(s)	827
PaeI	GCATGC	1 cut(s)	827
PaqCI	CACCTGC	1 cut(s)	1136
PceI	AGGCCT	1 cut(s)	1606
PctI	GAATGC	1 cut(s)	940
PdmI	GAANNNNTTC	1 cut(s)	1035
PfeI	GAWTC	5 cut(s)	59, 371, 496, 677, 1710
PflFI	GACNNNGTC	1 cut(s)	205
PkrI	GCNGC	2 cut(s)	447, 874
PleI	GAGTC	2 cut(s)	1086, 1486
PpsI	GAGTC	2 cut(s)	1086, 1486
PsiI	TTATAA	1 cut(s)	480
Psp6I	CCWGG	2 cut(s)	1327, 1606
PspFI	CCCAGC	1 cut(s)	539
PspGI	CCWGG	2 cut(s)	1327, 1606
PspN4I	GGNNCC	4 cut(s)	545, 655, 921, 1326
PspPI	GGNCC	3 cut(s)	7, 979, 1361
PstNI	CAGNNNCTG	2 cut(s)	275, 1448
PsuI	RGATCY	1 cut(s)	323
PsyI	GACNNNGTC	1 cut(s)	205
PvuII	CAGCTG	1 cut(s)	146
RruI	TCGCGA	1 cut(s)	1274
RsaI	GTAC	6 cut(s)	273, 283, 666, 1302, 1419, 1424
RsaNI	GTAC	6 cut(s)	272, 282, 665, 1301, 1418, 1423
RseI	CAYNNNNRTG	4 cut(s)	602, 767, 1347, 1749
SacII	CCGCGG	1 cut(s)	1675
SaqAI	TTAA	5 cut(s)	627, 882, 1197, 1338, 1524
SatI	GCNGC	2 cut(s)	446, 873
Sau3AI	GATC	4 cut(s)	323, 751, 1497, 1528
Sau96I	GGNCC	3 cut(s)	7, 979, 1361
SchI	GAGTC	2 cut(s)	1087, 1487
ScrFI	CCNGG	2 cut(s)	1329, 1608
SduI	GDGCHC	3 cut(s)	924, 1153, 1440
SfaNI	GCATC	4 cut(s)	188, 919, 964, 1803
Sfr303I	CCGCGG	1 cut(s)	1675
SgrBI	CCGCGG	1 cut(s)	1675
SinI	GGWCC	1 cut(s)	979
SmiMI	CAYNNNNRTG	4 cut(s)	602, 767, 1347, 1749
SmlI	CTYRAG	1 cut(s)	693
SmoI	CTYRAG	1 cut(s)	693
SpeI	ACTAGT	1 cut(s)	233
SphI	GCATGC	1 cut(s)	827
Sse9I	AATT	9 cut(s)	366, 509, 578, 624, 828, 1052, 1218, 1379, 1756
SseBI	AGGCCT	1 cut(s)	1606
SsiI	CCGC	7 cut(s)	156, 406, 570, 873, 1227, 1672, 1674
SspI	AATATT	2 cut(s)	1372, 1654
SspMI	CTAG	3 cut(s)	183, 234, 1125
StuI	AGGCCT	1 cut(s)	1606
StyD4I	CCNGG	2 cut(s)	1327, 1606
StyI	CCWWGG	1 cut(s)	500
TaaI	ACNGT	9 cut(s)	54, 246, 281, 286, 661, 784, 1312, 1422, 1427
TaiI	ACGT	4 cut(s)	347, 363, 882, 1648
TaqI	TCGA	1 cut(s)	1803
TasI	AATT	9 cut(s)	366, 509, 578, 624, 828, 1052, 1218, 1379, 1756
TatI	WGTACW	3 cut(s)	664, 1300, 1422
TauI	GCSGC	1 cut(s)	875
TfiI	GAWTC	5 cut(s)	59, 371, 496, 677, 1710
Tru1I	TTAA	5 cut(s)	627, 882, 1197, 1338, 1524
Tru9I	TTAA	5 cut(s)	627, 882, 1197, 1338, 1524
TscAI	CASTG	3 cut(s)	127, 1017, 1432
TseFI	GTSAC	4 cut(s)	1082, 1261, 1514, 1783
TseI	GCWGC	1 cut(s)	445
Tsp45I	GTSAC	4 cut(s)	1082, 1261, 1514, 1783
TspDTI	ATGAA	6 cut(s)	106, 264, 727, 1253, 1382, 1634
TspGWI	ACGGA	2 cut(s)	745, 975
TspRI	CASTG	3 cut(s)	127, 1017, 1432
Tth111I	GACNNNGTC	1 cut(s)	205
VneI	GTGCAC	1 cut(s)	1436
VpaK11BI	GGWCC	1 cut(s)	979
XapI	RAATTY	1 cut(s)	1379
XceI	RCATGY	1 cut(s)	827
XcmI	CCANNNNNNNNNTGG	1 cut(s)	627
XmnI	GAANNNNTTC	1 cut(s)	1035
XspI	CTAG	3 cut(s)	183, 234, 1125
ZraI	GACGTC	1 cut(s)	345
Zsp2I	ATGCAT	1 cut(s)	1818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.