Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001860

Physical Location & Seq

Genomic Coordinates Reverse (-)

64763442 .. 64766510

Gene Structure 3069 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGAACAACATGATCATCAGGTTGATATTGCTTCTGGTGTTTGTTGGATGGCTCATAGTTTGGATTATGGTGCCAACAAAAACTTACAAATATACCTGGAAACCCAACCTTGACGCCAATCTCACGTCAACTTATTTTGGAGTGCAAGGGACAAATCTGCTGCTTTTCGCTTTCCCAATGATGTTCGTAGCAGCCTTGAGCTGTGTTTATCTTCATCTAGTTCAGAAAAAATCACAAAACTCCAACGAGATCAGGTCGTCGGTTGCTGCTGGCTTCTGGAGACGTCCGGTGGTTGTAACGGCTCCTCTGGGGGTCGTCACTGCGATGGAGCTAGGGTTTGGGGTGATGTTTACTTCACTCTTGGTTTGGTCTCTAGCTAACTACTTGATTACCAGCTTCGGCAACCTCCATATGCATATGAATATGATGAGCATGGATAAAGTATGGCAAAGCAAGTTTCGAAGTGTATCGTTGAGACTTGGGTACATTGGGAACATATGCTGGGCGTTTCTCTTCTTTCCTGTGACTCGAAGCTCTTCGATTTTACACATGTTTGGGCTCACATCGGAGTCGAGTATAAAGTACCATATTTGGCTTGGCCATCTCTCCATGCTTCTATTTTCTGTACACACCGTAGGCTTCATCATCTACTGGGGCATGACTCATCAAATGGCTGAAATGCTAGAATGGAGCTCGACTTATGTATCAAACGTAGCTGGAGAGATTGCAATTGTGTTTGCAATGGCAATGTGGGTGACAAGCATTCCTCGTGTCAGACGGAAAATGTTTGAAGTATTTTTCTATACGCACCAGCTATACCCACTCTATATCTTGTTCTACGTATTACATGTTGGTGCTTCCTATTTCTGTATGATCCTTCCCGGAATCTTCCTCTTTGTCATTGATCGATACTTGAGATTTTTACAGTCTTCCCAACACGCTGCTTTAGTCTCAGCACGGGTTCTACCTTGTGAAACAATTGAGCTCAACTTCTCCAAGAGCAAAGGATTGGATTATAATCCTACTAGCATCTTGTTCGTCAATGTGCCTAGCATATCAAAGTTGCAATGGCACCCATTTACAGTGAATTCAAACTCTAACATGGAGGCGGACAAAATAAGTGTTGTGATCAAGAGTTTAGGAAGTTGGTCTCAAAAGCTTTATAAGCAACTGGCTTCTAATTCGGTGGAGCATATCCAAGTTTCTGTTGAAGGACCTTATGGACCTACTTCATCTCATTTTATGAGGCACAAGGGTTTAGTGATGGTAAGTGGAGGCAGTGGAATTACTCCTATGATTTCCATAATCCGAGAAATTATTTTCCAAAGCACTAAACCCGACTGCCATGTTCCAAGTGTACGGCTGATTTGTGCATTCAAGAACTCAGCTGATCTCTCACTGCTGCAACTATTGCTTCCACTTTCTGGCACGCCTTCTGACCTTACCCAGATACAATTGCAAATAGAAGCCTATGTTACAAGGGAGACAGAGCAGCAGCCTCCATCTTCCCAAAAGCCATCCCAAACTTTATGGTTTAAGCCAAACCCATTGGATTTACCGATTTCTGGTGTTCTAGGTCCAAAAAGTTGGTTATGGCTTGCTGCTATTATCTCATCCTCATTTGTCTTATTTCTCATTATTTTGGGCATGGTCACTCGTTTCTATATATACCCGATTGACCACAACACTGGTGATAGTTACCATTACTCCTTCACTTGCCTTTGGTACATGTTTTTGGTCTGTGCCTCCATTTTTATAGTCTCTAGTACAGTTTTCATCTGGTGCAAGAACCAAAATGCCATGGAAAGAAATCAAATTCAGAATATAGAAGTACCCACAGATACAATTGATGATAGAGAACTTGAAAGCTTTCCCCTTCATCATGAGTCCCTGATTGCTCAAGCTACCCAGGTGCATTATGGAACAAGGCCTGATCTCAAGAAAATTCTGTTGGAAACTAAAGGATCTGATATCGGAGTGTTGGCTTGTGGCCCAAAGAAGATGAGACATGAGGTTGCCAAACTTTGTTCATCCGGTTTGGCACAGAATCTGCACTTTGAGTCTATTAGCTTTAACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000293 GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0016723 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NAD_binding_6

Protein Analysis

693

Amino Acids

78.68

Weight (kDa)

8.98

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	160 - 279	9.3e-19	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	315 - 411	4.5e-24	FAD-binding domain
NAD_binding_6	PF08030	419 - 677	7.5e-22	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001860)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23980 AT5G23990 AT5G23990 AT5G23990
fragaria_vesca	FvH4_7g30120 FvH4_7g30120 FvH4_7g30141
malus_domestica	MD01G1207200.v1.1 MD07G1278100.v1.1
prunus_persica	Prupe.2G299900_v2.0.a1
pyrus_communis	pycom07g25310
rosa_chinensis	RchiOBHm_Chr1g0378121 RchiOBHm_Chr1g0378131 RchiOBHm_Chr1g0378151 RchiOBHm_Chr1g0378171
rosa_laevigata	RLG00000026465 RLG00000026467 RLG00000026469 RLG00000026470
rosa_multiflora	Rmu_sc0000625.1_g000007 Rmu_sc0000625.1_g000009 Rmu_sc0001465.1_g000007 Rmu_sc0001465.1_g000010
rosa_roxburghii	Rroxscaffold_156G00440270 Rroxscaffold_4G00280700 Rroxscaffold_4G00280710 Rroxscaffold_4G00280730 Rroxscaffold_4G00280760
rosa_rugosa	Rorug01G0406500 Rorug01G0406700
rosa_samantha	Rh1AG423000 Rh1AG423100 Rh1AG423300 Rh1BG385300 Rh1BG385500 Rh1BG385800 Rh1CG399300 Rh1CG399500 Rh1CG399600 Rh1DG416500 Rh1DG416700 Rh1DG416900
rosa_wichuraiana	Rw1G037390 Rw1G037400 Rw1G037420 Rw1G037430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1017, 1164
AatII	GACGTC	1 cut(s)	286
AccB1I	GGYRCC	2 cut(s)	70, 1071
AccB7I	CCANNNNNTGG	1 cut(s)	1424
AciI	CCGC	1 cut(s)	1109
AclWI	GGATC	2 cut(s)	868, 1972
AcoI	YGGCCR	1 cut(s)	598
AcsI	RAATTY	3 cut(s)	1087, 1815, 1944
AcyI	GRCGYC	2 cut(s)	114, 283
AfaI	GTAC	7 cut(s)	485, 584, 627, 1359, 1727, 1768, 1833
AfiI	CCNNNNNNNGG	2 cut(s)	1424, 1565
AflIII	ACRYGT	3 cut(s)	549, 847, 1728
AgsI	TTSAA	5 cut(s)	791, 1092, 1211, 1378, 1865
AjiI	CACGTC	1 cut(s)	126
AjnI	CCWGG	2 cut(s)	95, 1908
AjuI	GAANNNNNNNTTGG	2 cut(s)	1934, 1966
Alw21I	GWGCWC	2 cut(s)	695, 987
Alw26I	GTCTC	8 cut(s)	274, 375, 469, 955, 1155, 1478, 1765, 1999
AlwI	GGATC	2 cut(s)	868, 1972
AlwNI	CAGNNNCTG	1 cut(s)	2050
AoxI	GGCC	3 cut(s)	598, 1928, 1990
ApeKI	GCWGC	8 cut(s)	160, 191, 266, 941, 1402, 1492, 1495, 1601
ApoI	RAATTY	3 cut(s)	1087, 1815, 1944
Asp700I	GAANNNNTTC	2 cut(s)	535, 1869
AspS9I	GGNCC	4 cut(s)	1214, 1223, 1577, 1991
AsuC2I	CCSGG	1 cut(s)	882
AsuHPI	GGTGA	3 cut(s)	355, 766, 1703
AsuII	TTCGAA	1 cut(s)	460
AvaII	GGWCC	3 cut(s)	1214, 1223, 1577
BaeI	ACNNNNGTAYC	2 cut(s)	687, 720
BalI	TGGCCA	1 cut(s)	600
BanI	GGYRCC	2 cut(s)	70, 1071
BanII	GRGCYC	3 cut(s)	561, 695, 987
BauI	CACGAG	1 cut(s)	768
BbsI	GAAGAC	1 cut(s)	921
Bbv12I	GWGCWC	2 cut(s)	695, 987
BbvI	GCAGC	8 cut(s)	147, 203, 253, 928, 1389, 1504, 1507, 1588
BccI	CCATC	6 cut(s)	42, 319, 609, 1258, 1510, 1525
BceAI	ACGGC	2 cut(s)	315, 1376
BcgI	CGANNNNNNTGC	2 cut(s)	1018, 1052
BciT130I	CCWGG	2 cut(s)	97, 1910
BclI	TGATCA	2 cut(s)	12, 1128
BcnI	CCSGG	1 cut(s)	882
BcoDI	GTCTC	8 cut(s)	274, 375, 469, 955, 1155, 1478, 1765, 1999
BfaI	CTAG	8 cut(s)	218, 332, 374, 683, 1026, 1050, 1574, 1764
BisI	GCNGC	8 cut(s)	161, 192, 267, 942, 1403, 1493, 1496, 1602
BlsI	GCNGC	8 cut(s)	162, 193, 268, 943, 1404, 1494, 1497, 1603
Bme1390I	CCNGG	3 cut(s)	97, 882, 1910
Bme18I	GGWCC	3 cut(s)	1214, 1223, 1577
BmgBI	CACGTC	1 cut(s)	126
BmgT120I	GGNCC	4 cut(s)	1214, 1223, 1577, 1991
BmiI	GGNNCC	3 cut(s)	72, 303, 1073
BmrFI	CCNGG	3 cut(s)	97, 882, 1910
BmrI	ACTGGG	1 cut(s)	661
BmsI	GCATC	1 cut(s)	1038
BmuI	ACTGGG	1 cut(s)	661
BpiI	GAAGAC	1 cut(s)	921
BpmI	CTGGAG	2 cut(s)	298, 738
Bpu14I	TTCGAA	1 cut(s)	460
BpuEI	CTTGAG	4 cut(s)	217, 934, 1884, 1922
BpuMI	CCSGG	1 cut(s)	882
Bsa29I	ATCGAT	1 cut(s)	907
BsaAI	YACGTR	1 cut(s)	841
BsaBI	GATNNNNATC	1 cut(s)	1017
BsaHI	GRCGYC	2 cut(s)	114, 283
BsaI	GGTCTC	2 cut(s)	375, 1155
BsaJI	CCNNGG	2 cut(s)	1800, 1908
BsaWI	WCCGGW	2 cut(s)	286, 2033
BsaXI	ACNNNNNCTCC	4 cut(s)	320, 350, 1691, 1721
Bsc4I	CCNNNNNNNGG	2 cut(s)	1424, 1565
Bse1I	ACTGG	4 cut(s)	656, 1176, 1693, 2081
Bse3DI	GCAATG	3 cut(s)	747, 753, 1073
Bse8I	GATNNNNATC	1 cut(s)	1017
BseBI	CCWGG	2 cut(s)	97, 1910
BseCI	ATCGAT	1 cut(s)	907
BseDI	CCNNGG	2 cut(s)	1800, 1908
BseGI	GGATG	4 cut(s)	53, 1517, 1613, 2030
BseJI	GATNNNNATC	1 cut(s)	1017
BseLI	CCNNNNNNNGG	2 cut(s)	1424, 1565
BseMI	GCAATG	3 cut(s)	747, 753, 1073
BseMII	CTCAG	2 cut(s)	966, 1398
BseNI	ACTGG	4 cut(s)	656, 1176, 1693, 2081
BseRI	GAGGAG	1 cut(s)	294
BseXI	GCAGC	8 cut(s)	147, 203, 253, 928, 1389, 1504, 1507, 1588
BseYI	CCCAGC	1 cut(s)	501
BsgI	GTGCAG	1 cut(s)	2036
BshFI	GGCC	3 cut(s)	600, 1930, 1992
BshNI	GGYRCC	2 cut(s)	70, 1071
BshVI	ATCGAT	1 cut(s)	907
BsiHKAI	GWGCWC	2 cut(s)	695, 987
BsiSI	CCGG	3 cut(s)	287, 882, 2034
BslFI	GGGAC	2 cut(s)	163, 1873
BslI	CCNNNNNNNGG	2 cut(s)	1424, 1565
BsmAI	GTCTC	8 cut(s)	274, 375, 469, 955, 1155, 1478, 1765, 1999
BsmBI	CGTCTC	1 cut(s)	274
BsmFI	GGGAC	2 cut(s)	163, 1873
BsmI	GAATGC	2 cut(s)	762, 1373
BsnI	GGCC	3 cut(s)	600, 1930, 1992
Bso31I	GGTCTC	2 cut(s)	375, 1155
Bsp119I	TTCGAA	1 cut(s)	460
Bsp1286I	GDGCHC	3 cut(s)	561, 695, 987
Bsp1407I	TGTACA	1 cut(s)	625
Bsp143I	GATC	8 cut(s)	12, 249, 873, 904, 1128, 1390, 1933, 1964
Bsp19I	CCATGG	1 cut(s)	1800
BspACI	CCGC	1 cut(s)	1109
BspANI	GGCC	3 cut(s)	600, 1930, 1992
BspCNI	CTCAG	2 cut(s)	965, 1397
BspDI	ATCGAT	1 cut(s)	907
BspHI	TCATGA	1 cut(s)	1882
BspLI	GGNNCC	3 cut(s)	72, 303, 1073
BspPI	GGATC	2 cut(s)	868, 1972
BspQI	GCTCTTC	1 cut(s)	541
BspT104I	TTCGAA	1 cut(s)	460
BspT107I	GGYRCC	2 cut(s)	70, 1071
BspTNI	GGTCTC	2 cut(s)	375, 1155
BsrDI	GCAATG	3 cut(s)	747, 753, 1073
BsrGI	TGTACA	1 cut(s)	625
BsrI	ACTGG	4 cut(s)	656, 1176, 1693, 2081
BssECI	CCNNGG	2 cut(s)	1800, 1908
BssMI	GATC	8 cut(s)	12, 249, 873, 904, 1128, 1390, 1933, 1964
BssNI	GRCGYC	2 cut(s)	114, 283
BssSI	CACGAG	1 cut(s)	768
BssT1I	CCWWGG	1 cut(s)	1800
Bst2BI	CACGAG	1 cut(s)	768
Bst2UI	CCWGG	2 cut(s)	97, 1910
Bst4CI	ACNGT	4 cut(s)	634, 927, 1084, 1771
Bst6I	CTCTTC	2 cut(s)	518, 541
BstACI	GRCGYC	2 cut(s)	114, 283
BstAPI	GCANNNNNTGC	1 cut(s)	1411
BstAUI	TGTACA	1 cut(s)	625
BstBAI	YACGTR	1 cut(s)	841
BstBI	TTCGAA	1 cut(s)	460
BstC8I	GCNNGC	3 cut(s)	271, 1430, 1599
BstDEI	CTNAG	2 cut(s)	952, 1384
BstDSI	CCRYGG	1 cut(s)	1800
BstF5I	GGATG	4 cut(s)	53, 1517, 1613, 2030
BstKTI	GATC	8 cut(s)	15, 252, 876, 907, 1131, 1393, 1936, 1967
BstMAI	GTCTC	8 cut(s)	274, 375, 469, 955, 1155, 1478, 1765, 1999
BstMBI	GATC	8 cut(s)	12, 249, 873, 904, 1128, 1390, 1933, 1964
BstMWI	GCNNNNNNNGC	2 cut(s)	1165, 1411
BstNI	CCWGG	2 cut(s)	97, 1910
BstNSI	RCATGY	3 cut(s)	553, 851, 1732
BstSCI	CCNGG	3 cut(s)	95, 880, 1908
BstSNI	TACGTA	1 cut(s)	841
BstV1I	GCAGC	8 cut(s)	147, 203, 253, 928, 1389, 1504, 1507, 1588
BstV2I	GAAGAC	1 cut(s)	921
BstX2I	RGATCY	1 cut(s)	1964
BstXI	CCANNNNNNTGG	2 cut(s)	1587, 1688
BstYI	RGATCY	1 cut(s)	1964
Bsu15I	ATCGAT	1 cut(s)	907
BsuRI	GGCC	3 cut(s)	600, 1930, 1992
BsuTUI	ATCGAT	1 cut(s)	907
BtgI	CCRYGG	1 cut(s)	1800
BtgZI	GCGATG	1 cut(s)	338
BtrI	CACGTC	1 cut(s)	126
BtsCI	GGATG	4 cut(s)	53, 1517, 1613, 2030
BtsI	GCAGTG	3 cut(s)	318, 1285, 1397
BtsIMutI	CAGTG	5 cut(s)	318, 1089, 1285, 1397, 1686
Cac8I	GCNNGC	3 cut(s)	271, 1430, 1599
CaiI	CAGNNNCTG	1 cut(s)	2050
CciI	TCATGA	1 cut(s)	1882
Cfr13I	GGNCC	4 cut(s)	1214, 1223, 1577, 1991
ClaI	ATCGAT	1 cut(s)	907
CseI	GACGC	1 cut(s)	122
Csp6I	GTAC	7 cut(s)	484, 583, 626, 1358, 1726, 1767, 1832
CviQI	GTAC	7 cut(s)	484, 583, 626, 1358, 1726, 1767, 1832
DdeI	CTNAG	2 cut(s)	952, 1384
DpnI	GATC	8 cut(s)	14, 251, 875, 906, 1130, 1392, 1935, 1966
DpnII	GATC	8 cut(s)	12, 249, 873, 904, 1128, 1390, 1933, 1964
EaeI	YGGCCR	1 cut(s)	598
Eam1104I	CTCTTC	2 cut(s)	518, 541
EarI	CTCTTC	2 cut(s)	518, 541
EciI	GGCGGA	1 cut(s)	1124
Ecl136II	GAGCTC	2 cut(s)	693, 985
Eco105I	TACGTA	1 cut(s)	841
Eco130I	CCWWGG	1 cut(s)	1800
Eco147I	AGGCCT	1 cut(s)	1930
Eco24I	GRGCYC	3 cut(s)	561, 695, 987
Eco31I	GGTCTC	2 cut(s)	375, 1155
Eco32I	GATATC	1 cut(s)	1972
Eco47I	GGWCC	3 cut(s)	1214, 1223, 1577
Eco53kI	GAGCTC	2 cut(s)	693, 985
EcoICRI	GAGCTC	2 cut(s)	693, 985
EcoO109I	RGGNCCY	1 cut(s)	1214
EcoRI	GAATTC	1 cut(s)	1087
EcoRII	CCWGG	2 cut(s)	95, 1908
EcoRV	GATATC	1 cut(s)	1972
EcoT14I	CCWWGG	1 cut(s)	1800
EcoT22I	ATGCAT	1 cut(s)	417
EcoT38I	GRGCYC	3 cut(s)	561, 695, 987
ErhI	CCWWGG	1 cut(s)	1800
Esp3I	CGTCTC	1 cut(s)	274
FaqI	GGGAC	2 cut(s)	163, 1873
FauNDI	CATATG	3 cut(s)	411, 417, 497
FbaI	TGATCA	2 cut(s)	12, 1128
Fnu4HI	GCNGC	8 cut(s)	161, 192, 267, 942, 1403, 1493, 1496, 1602
FokI	GGATG	4 cut(s)	60, 1504, 1600, 2017
FriOI	GRGCYC	3 cut(s)	561, 695, 987
Fsp4HI	GCNGC	8 cut(s)	161, 192, 267, 942, 1403, 1493, 1496, 1602
FspBI	CTAG	8 cut(s)	218, 332, 374, 683, 1026, 1050, 1574, 1764
GluI	GCNGC	8 cut(s)	161, 192, 267, 942, 1403, 1493, 1496, 1602
GsaI	CCCAGC	1 cut(s)	505
GsuI	CTGGAG	2 cut(s)	298, 738
HaeIII	GGCC	3 cut(s)	600, 1930, 1992
HapII	CCGG	3 cut(s)	287, 882, 2034
HgaI	GACGC	1 cut(s)	122
Hin1I	GRCGYC	2 cut(s)	114, 283
HincII	GTYRAC	1 cut(s)	129
HindII	GTYRAC	1 cut(s)	129
HindIII	AAGCTT	2 cut(s)	1157, 1867
HinfI	GANTC	7 cut(s)	526, 569, 661, 885, 1886, 2047, 2060
HpaII	CCGG	3 cut(s)	287, 882, 2034
HphI	GGTGA	3 cut(s)	355, 766, 1703
Hpy166II	GTNNAC	4 cut(s)	129, 351, 628, 1358
Hpy188I	TCNGA	8 cut(s)	225, 568, 776, 1310, 1438, 1821, 1969, 1976
Hpy188III	TCNNGA	5 cut(s)	277, 1132, 1378, 1883, 1939
Hpy8I	GTNNAC	4 cut(s)	129, 351, 628, 1358
Hpy99I	CGWCG	1 cut(s)	262
HpyAV	CCTTC	5 cut(s)	887, 1205, 1443, 1720, 1886
HpyCH4III	ACNGT	4 cut(s)	634, 927, 1084, 1771
HpyCH4IV	ACGT	4 cut(s)	125, 283, 711, 840
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1165, 1411
HpyF3I	CTNAG	2 cut(s)	952, 1384
HpySE526I	ACGT	4 cut(s)	125, 283, 711, 840
Hsp92I	GRCGYC	2 cut(s)	114, 283
Ksp22I	TGATCA	2 cut(s)	12, 1128
Kzo9I	GATC	8 cut(s)	12, 249, 873, 904, 1128, 1390, 1933, 1964
LguI	GCTCTTC	1 cut(s)	541
LmnI	GCTCC	4 cut(s)	307, 328, 690, 1189
Lsp1109I	GCAGC	8 cut(s)	147, 203, 253, 928, 1389, 1504, 1507, 1588
LweI	GCATC	1 cut(s)	1038
MaeI	CTAG	8 cut(s)	218, 332, 374, 683, 1026, 1050, 1574, 1764
MaeII	ACGT	4 cut(s)	125, 283, 711, 840
MaeIII	GTNAC	7 cut(s)	295, 316, 523, 754, 1474, 1651, 1697
MalI	GATC	8 cut(s)	14, 251, 875, 906, 1130, 1392, 1935, 1966
MboI	GATC	8 cut(s)	12, 249, 873, 904, 1128, 1390, 1933, 1964
MboII	GAAGA	7 cut(s)	203, 505, 528, 880, 921, 1497, 2011
MfeI	CAATTG	4 cut(s)	729, 978, 1454, 1845
MflI	RGATCY	1 cut(s)	1964
MhlI	GDGCHC	3 cut(s)	561, 695, 987
MlsI	TGGCCA	1 cut(s)	600
MluNI	TGGCCA	1 cut(s)	600
MlyI	GAGTC	5 cut(s)	520, 578, 655, 1895, 2069
MmeI	TCCRAC	3 cut(s)	25, 267, 1932
Mox20I	TGGCCA	1 cut(s)	600
Mph1103I	ATGCAT	1 cut(s)	417
MroXI	GAANNNNTTC	2 cut(s)	535, 1869
MscI	TGGCCA	1 cut(s)	600
MseI	TTAA	2 cut(s)	1536, 2073
MslI	CAYNNNNRTG	2 cut(s)	323, 852
Msp20I	TGGCCA	1 cut(s)	600
MspA1I	CMGCKG	1 cut(s)	1388
MspI	CCGG	3 cut(s)	287, 882, 2034
MspR9I	CCNGG	3 cut(s)	97, 882, 1910
MunI	CAATTG	4 cut(s)	729, 978, 1454, 1845
Mva1269I	GAATGC	2 cut(s)	762, 1373
MvaI	CCWGG	2 cut(s)	97, 1910
MwoI	GCNNNNNNNGC	2 cut(s)	1165, 1411
NciI	CCSGG	1 cut(s)	882
NcoI	CCATGG	1 cut(s)	1800
NdeI	CATATG	3 cut(s)	411, 417, 497
NdeII	GATC	8 cut(s)	12, 249, 873, 904, 1128, 1390, 1933, 1964
NlaIV	GGNNCC	3 cut(s)	72, 303, 1073
NmuCI	GTSAC	4 cut(s)	316, 523, 754, 1651
NsiI	ATGCAT	1 cut(s)	417
NspI	RCATGY	3 cut(s)	553, 851, 1732
NspV	TTCGAA	1 cut(s)	460
PagI	TCATGA	1 cut(s)	1882
PceI	AGGCCT	1 cut(s)	1930
PciI	ACATGT	3 cut(s)	549, 847, 1728
PciSI	GCTCTTC	1 cut(s)	541
PctI	GAATGC	2 cut(s)	762, 1373
PdmI	GAANNNNTTC	2 cut(s)	535, 1869
PfeI	GAWTC	2 cut(s)	885, 2047
PflMI	CCANNNNNTGG	1 cut(s)	1424
PfoI	TCCNGGA	1 cut(s)	880
PkrI	GCNGC	8 cut(s)	162, 193, 268, 943, 1404, 1494, 1497, 1603
PleI	GAGTC	5 cut(s)	520, 577, 655, 1894, 2068
PpsI	GAGTC	5 cut(s)	520, 577, 655, 1894, 2068
Ppu21I	YACGTR	1 cut(s)	841
PpuMI	RGGWCCY	1 cut(s)	1214
PscI	ACATGT	3 cut(s)	549, 847, 1728
PsiI	TTATAA	2 cut(s)	1017, 1164
Psp124BI	GAGCTC	2 cut(s)	695, 987
Psp5II	RGGWCCY	1 cut(s)	1214
Psp6I	CCWGG	2 cut(s)	95, 1908
PspFI	CCCAGC	1 cut(s)	501
PspGI	CCWGG	2 cut(s)	95, 1908
PspN4I	GGNNCC	3 cut(s)	72, 303, 1073
PspPI	GGNCC	4 cut(s)	1214, 1223, 1577, 1991
PspPPI	RGGWCCY	1 cut(s)	1214
PstNI	CAGNNNCTG	1 cut(s)	2050
PsuI	RGATCY	1 cut(s)	1964
PvuII	CAGCTG	1 cut(s)	1388
RsaI	GTAC	7 cut(s)	485, 584, 627, 1359, 1727, 1768, 1833
RsaNI	GTAC	7 cut(s)	484, 583, 626, 1358, 1726, 1767, 1832
RseI	CAYNNNNRTG	2 cut(s)	323, 852
SacI	GAGCTC	2 cut(s)	695, 987
SapI	GCTCTTC	1 cut(s)	541
SaqAI	TTAA	2 cut(s)	1536, 2073
SatI	GCNGC	8 cut(s)	161, 192, 267, 942, 1403, 1493, 1496, 1602
Sau3AI	GATC	8 cut(s)	12, 249, 873, 904, 1128, 1390, 1933, 1964
Sau96I	GGNCC	4 cut(s)	1214, 1223, 1577, 1991
SchI	GAGTC	5 cut(s)	520, 578, 655, 1895, 2069
ScrFI	CCNGG	3 cut(s)	97, 882, 1910
SduI	GDGCHC	3 cut(s)	561, 695, 987
SfaNI	GCATC	1 cut(s)	1038
SfuI	TTCGAA	1 cut(s)	460
SinI	GGWCC	3 cut(s)	1214, 1223, 1577
SmiMI	CAYNNNNRTG	2 cut(s)	323, 852
SmlI	CTYRAG	4 cut(s)	196, 913, 1899, 1937
SmoI	CTYRAG	4 cut(s)	196, 913, 1899, 1937
SnaBI	TACGTA	1 cut(s)	841
SseBI	AGGCCT	1 cut(s)	1930
SsiI	CCGC	1 cut(s)	1109
SspMI	CTAG	8 cut(s)	218, 332, 374, 683, 1026, 1050, 1574, 1764
SstI	GAGCTC	2 cut(s)	695, 987
StuI	AGGCCT	1 cut(s)	1930
StyD4I	CCNGG	3 cut(s)	95, 880, 1908
StyI	CCWWGG	1 cut(s)	1800
TaaI	ACNGT	4 cut(s)	634, 927, 1084, 1771
TaiI	ACGT	4 cut(s)	128, 286, 714, 843
TaqI	TCGA	6 cut(s)	460, 529, 539, 572, 695, 907
TatI	WGTACW	2 cut(s)	625, 1766
TfiI	GAWTC	2 cut(s)	885, 2047
Tru1I	TTAA	2 cut(s)	1536, 2073
Tru9I	TTAA	2 cut(s)	1536, 2073
TscAI	CASTG	5 cut(s)	325, 1089, 1285, 1404, 1693
TseFI	GTSAC	4 cut(s)	316, 523, 754, 1651
TseI	GCWGC	8 cut(s)	160, 191, 266, 941, 1402, 1492, 1495, 1601
Tsp45I	GTSAC	4 cut(s)	316, 523, 754, 1651
TspDTI	ATGAA	8 cut(s)	17, 203, 434, 631, 1221, 1765, 1868, 2019
TspGWI	ACGGA	1 cut(s)	793
TspRI	CASTG	5 cut(s)	325, 1089, 1285, 1404, 1693
Van91I	CCANNNNNTGG	1 cut(s)	1424
VpaK11BI	GGWCC	3 cut(s)	1214, 1223, 1577
XapI	RAATTY	3 cut(s)	1087, 1815, 1944
XceI	RCATGY	3 cut(s)	553, 851, 1732
XcmI	CCANNNNNNNNNTGG	2 cut(s)	593, 1916
XmnI	GAANNNNTTC	2 cut(s)	535, 1869
XspI	CTAG	8 cut(s)	218, 332, 374, 683, 1026, 1050, 1574, 1764
ZraI	GACGTC	1 cut(s)	284
Zsp2I	ATGCAT	1 cut(s)	417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.