RchiOBHm_Chr1g0337601

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
29476807 .. 29479401
2595 bp
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UTR
Exon/CDS
Intron
PRQ56549

Sequence Viewer

Length: 177 bp
ATGATCGGAGTAGATATGGCTTCATCACCATTCACCCCACTCTCAATTTACGGTTCATATAAAAGGAGGGAAGGGAAAGAGGAGCAGAGCAAAATCAAACCCAGAAAGAGGAAGAAATTAGTACCAAAATCGGTGATTCCAGATTCACCTAGCCAATTGTTATTGGGTACACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

58

Amino Acids

6.5

Weight (kDa)

10.17

Isoelectric Point (pI)

67.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 123, 169
AfiI CCNNNNNNNGG 1 cut(s) 108
AsuHPI GGTGA 4 cut(s) 18, 25, 138, 145
BfaI CTAG 1 cut(s) 150
Bsc4I CCNNNNNNNGG 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 108
BseRI GAGGAG 1 cut(s) 95
BslI CCNNNNNNNGG 1 cut(s) 108
Bsp143I GATC 1 cut(s) 3
BssMI GATC 1 cut(s) 3
Bst4CI ACNGT 2 cut(s) 53, 174
BstKTI GATC 1 cut(s) 6
BstMBI GATC 1 cut(s) 3
Csp6I GTAC 2 cut(s) 122, 168
CviJI RGCY 2 cut(s) 20, 153
CviKI_1 RGCY 2 cut(s) 20, 153
CviQI GTAC 2 cut(s) 122, 168
DpnI GATC 1 cut(s) 5
DpnII GATC 1 cut(s) 3
FaiI YATR 3 cut(s) 17, 58, 60
FspBI CTAG 1 cut(s) 150
HinfI GANTC 2 cut(s) 136, 143
HphI GGTGA 4 cut(s) 18, 25, 138, 145
Hpy166II GTNNAC 1 cut(s) 170
Hpy188I TCNGA 1 cut(s) 8
Hpy188III TCNNGA 1 cut(s) 140
Hpy8I GTNNAC 1 cut(s) 170
HpyAV CCTTC 1 cut(s) 65
HpyCH4III ACNGT 2 cut(s) 53, 174
Kzo9I GATC 1 cut(s) 3
LmnI GCTCC 1 cut(s) 82
LpnPI CCDG 2 cut(s) 115, 153
MaeI CTAG 1 cut(s) 150
MalI GATC 1 cut(s) 5
MboI GATC 1 cut(s) 3
MboII GAAGA 1 cut(s) 124
MfeI CAATTG 1 cut(s) 155
MluCI AATT 3 cut(s) 45, 116, 155
MnlI CCTC 3 cut(s) 60, 73, 102
MunI CAATTG 1 cut(s) 155
NdeII GATC 1 cut(s) 3
PfeI GAWTC 2 cut(s) 136, 143
RsaI GTAC 2 cut(s) 123, 169
RsaNI GTAC 2 cut(s) 122, 168
Sau3AI GATC 1 cut(s) 3
SetI ASST 1 cut(s) 151
SgeI CNNG 3 cut(s) 114, 152, 162
Sse9I AATT 3 cut(s) 45, 116, 155
SspMI CTAG 1 cut(s) 150
TaaI ACNGT 2 cut(s) 53, 174
TasI AATT 3 cut(s) 45, 116, 155
TfiI GAWTC 2 cut(s) 136, 143
TspDTI ATGAA 2 cut(s) 12, 45
XspI CTAG 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.