Rh2AG445500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
65827118 .. 65828869
1752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG445500.1

Sequence Viewer

Length: 252 bp
ATGATCGGAGTAGATATGGCTTCATCACCATTCACCCCACTCTCAATTTACGGTTCATATAAAAGGAGCGAAGGGAAAGAGGAGCAGAGCAAAATCAAACCCAGAAAGAGGAAGAAATTAGTACCAAAATCGGTGATTCCAGATTCACCTAGCCAATTGTTATTGGAGCGGATTCTCGATCAAACCGGAAACGCAGAGAAAGTATGGAGGAACTCGGTTGACAGTGTTGCTAATTCACTTGAGAACGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

83

Amino Acids

9.3

Weight (kDa)

9.35

Isoelectric Point (pI)

54.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 169
AciI CCGC 1 cut(s) 169
AfaI GTAC 1 cut(s) 123
AfiI CCNNNNNNNGG 1 cut(s) 108
AsuHPI GGTGA 4 cut(s) 18, 25, 138, 145
BfaI CTAG 1 cut(s) 150
BsaWI WCCGGW 1 cut(s) 185
Bsc4I CCNNNNNNNGG 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 108
BseRI GAGGAG 1 cut(s) 95
BsiSI CCGG 1 cut(s) 186
BslI CCNNNNNNNGG 1 cut(s) 108
Bsp143I GATC 2 cut(s) 3, 178
BspACI CCGC 1 cut(s) 169
BsrBI CCGCTC 1 cut(s) 169
BssMI GATC 2 cut(s) 3, 178
Bst4CI ACNGT 2 cut(s) 53, 224
BstKTI GATC 2 cut(s) 6, 181
BstMBI GATC 2 cut(s) 3, 178
BtsIMutI CAGTG 1 cut(s) 229
Csp6I GTAC 1 cut(s) 122
CviJI RGCY 2 cut(s) 20, 153
CviKI_1 RGCY 2 cut(s) 20, 153
CviQI GTAC 1 cut(s) 122
DpnI GATC 2 cut(s) 5, 180
DpnII GATC 2 cut(s) 3, 178
FaiI YATR 4 cut(s) 17, 58, 60, 205
FspBI CTAG 1 cut(s) 150
HapII CCGG 1 cut(s) 186
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HinfI GANTC 3 cut(s) 136, 143, 172
HpaII CCGG 1 cut(s) 186
HphI GGTGA 4 cut(s) 18, 25, 138, 145
Hpy166II GTNNAC 1 cut(s) 220
Hpy188I TCNGA 1 cut(s) 8
Hpy188III TCNNGA 2 cut(s) 140, 176
Hpy8I GTNNAC 1 cut(s) 220
HpyAV CCTTC 1 cut(s) 65
HpyCH4III ACNGT 2 cut(s) 53, 224
Kzo9I GATC 2 cut(s) 3, 178
LmnI GCTCC 3 cut(s) 66, 82, 166
LpnPI CCDG 3 cut(s) 115, 153, 199
MaeI CTAG 1 cut(s) 150
MalI GATC 2 cut(s) 5, 180
MbiI CCGCTC 1 cut(s) 169
MboI GATC 2 cut(s) 3, 178
MboII GAAGA 1 cut(s) 124
MfeI CAATTG 1 cut(s) 155
MluCI AATT 4 cut(s) 45, 116, 155, 232
MnlI CCTC 3 cut(s) 73, 102, 201
MspI CCGG 1 cut(s) 186
MunI CAATTG 1 cut(s) 155
NdeII GATC 2 cut(s) 3, 178
PfeI GAWTC 3 cut(s) 136, 143, 172
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
Sau3AI GATC 2 cut(s) 3, 178
SetI ASST 1 cut(s) 151
SgeI CNNG 6 cut(s) 114, 152, 162, 188, 198, 226
SmlI CTYRAG 1 cut(s) 239
SmoI CTYRAG 1 cut(s) 239
Sse9I AATT 4 cut(s) 45, 116, 155, 232
SsiI CCGC 1 cut(s) 169
SspMI CTAG 1 cut(s) 150
TaaI ACNGT 2 cut(s) 53, 224
TaqI TCGA 1 cut(s) 177
TasI AATT 4 cut(s) 45, 116, 155, 232
TfiI GAWTC 3 cut(s) 136, 143, 172
TscAI CASTG 1 cut(s) 229
TspDTI ATGAA 2 cut(s) 12, 45
TspRI CASTG 1 cut(s) 229
XspI CTAG 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.