RchiOBHm_Chr2g0134321

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
51395598 .. 51399627
4030 bp
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UTR
Exon/CDS
Intron
PRQ50536

Sequence Viewer

Length: 183 bp
ATGCTCGGAGTAGAGATGGCTTCATCACTATTCACCCCACTCTCCATTTACGGTTCATATAAAAGGAGAAAAGGGAAAGAGGAGCAGAGCAAAGTTAAACCCAGAAAGAGGAAAAAATCGGTGGTTGCAGATAAGATATTGTGTGCAGAGCGGATTCTCAGTCAAACCCAAAAGGCAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

60

Amino Acids

6.83

Weight (kDa)

10.15

Isoelectric Point (pI)

46.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 151
AciI CCGC 1 cut(s) 151
AfiI CCNNNNNNNGG 1 cut(s) 108
AsuHPI GGTGA 1 cut(s) 25
BccI CCATC 1 cut(s) 10
Bsc4I CCNNNNNNNGG 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 108
BseMII CTCAG 1 cut(s) 172
BseRI GAGGAG 1 cut(s) 95
BsgI GTGCAG 1 cut(s) 165
BslI CCNNNNNNNGG 1 cut(s) 108
BspACI CCGC 1 cut(s) 151
BspCNI CTCAG 1 cut(s) 171
BsrBI CCGCTC 1 cut(s) 151
Bst4CI ACNGT 1 cut(s) 53
BstDEI CTNAG 1 cut(s) 158
CviJI RGCY 1 cut(s) 20
CviKI_1 RGCY 1 cut(s) 20
DdeI CTNAG 1 cut(s) 158
FaiI YATR 2 cut(s) 58, 60
HinfI GANTC 1 cut(s) 154
HphI GGTGA 1 cut(s) 25
Hpy188I TCNGA 1 cut(s) 8
HpyCH4III ACNGT 1 cut(s) 53
HpyCH4V TGCA 2 cut(s) 128, 146
HpyF3I CTNAG 1 cut(s) 158
LmnI GCTCC 1 cut(s) 82
LpnPI CCDG 1 cut(s) 115
MbiI CCGCTC 1 cut(s) 151
MnlI CCTC 2 cut(s) 73, 102
MseI TTAA 1 cut(s) 96
PfeI GAWTC 1 cut(s) 154
SaqAI TTAA 1 cut(s) 96
SgeI CNNG 2 cut(s) 17, 114
SsiI CCGC 1 cut(s) 151
TaaI ACNGT 1 cut(s) 53
TfiI GAWTC 1 cut(s) 154
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TspDTI ATGAA 2 cut(s) 12, 45
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.