RchiOBHm_Chr1g0349491

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
42587191 .. 42589933
2743 bp
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UTR
Exon/CDS
Intron
PRQ57546

Sequence Viewer

Length: 156 bp
ATGATGAGTTCCCTCTTTTGCAGTTTCAGTTCAGTTGGTTCACTAGAAGAGTTGGTTGGTAACAGAAACTTTGTTTCCGGGTACTTTGATTTACGGAGCTGGTACTTTGATTTGACACATTGTACATTGATATCGAGTGTTTATCTCTTTCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

51

Amino Acids

5.87

Weight (kDa)

4.75

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 3 cut(s) 83, 104, 124
AjuI GAANNNNNNNTTGG 2 cut(s) 39, 71
AluBI AGCT 1 cut(s) 99
AluI AGCT 1 cut(s) 99
AsuC2I CCSGG 1 cut(s) 79
BcnI CCSGG 1 cut(s) 79
BfaI CTAG 2 cut(s) 44, 154
Bme1390I CCNGG 1 cut(s) 79
BmrFI CCNGG 1 cut(s) 79
BpuMI CCSGG 1 cut(s) 79
BsiSI CCGG 1 cut(s) 78
Bsp1407I TGTACA 1 cut(s) 122
BsrGI TGTACA 1 cut(s) 122
Bst6I CTCTTC 1 cut(s) 42
BstAUI TGTACA 1 cut(s) 122
BstSCI CCNGG 1 cut(s) 77
Csp6I GTAC 3 cut(s) 82, 103, 123
CviJI RGCY 1 cut(s) 99
CviKI_1 RGCY 1 cut(s) 99
CviQI GTAC 3 cut(s) 82, 103, 123
Eam1104I CTCTTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 42
Eco32I GATATC 1 cut(s) 132
EcoRV GATATC 1 cut(s) 132
FspBI CTAG 2 cut(s) 44, 154
HapII CCGG 1 cut(s) 78
HpaII CCGG 1 cut(s) 78
Hpy166II GTNNAC 1 cut(s) 41
Hpy8I GTNNAC 1 cut(s) 41
HpyCH4V TGCA 1 cut(s) 21
LmnI GCTCC 1 cut(s) 96
LpnPI CCDG 2 cut(s) 85, 91
MaeI CTAG 2 cut(s) 44, 154
MaeIII GTNAC 1 cut(s) 59
MboII GAAGA 1 cut(s) 59
MnlI CCTC 1 cut(s) 23
MspI CCGG 1 cut(s) 78
MspR9I CCNGG 1 cut(s) 79
NciI CCSGG 1 cut(s) 79
RsaI GTAC 3 cut(s) 83, 104, 124
RsaNI GTAC 3 cut(s) 82, 103, 123
ScrFI CCNGG 1 cut(s) 79
SetI ASST 1 cut(s) 101
SgeI CNNG 5 cut(s) 56, 90, 91, 112, 147
SspMI CTAG 2 cut(s) 44, 154
StyD4I CCNGG 1 cut(s) 77
TaqI TCGA 1 cut(s) 134
TatI WGTACW 1 cut(s) 122
TspGWI ACGGA 1 cut(s) 109
XspI CTAG 2 cut(s) 44, 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.