RchiOBHm_Chr2g0101091

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
12825651 .. 12828516
2866 bp
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UTR
Exon/CDS
Intron
PRQ47571

Sequence Viewer

Length: 222 bp
ATGTGGGAGATGATCGGAGTAGATATGGCTTCATCACCATTCACCCCACTCTCAATTTACGGTTCATATAAAAGGAGCGAAGGGATAGAGGAGCAGCGCAAAATCAAACCCAGAAAGAGGAAGAAATTAGTACCAAAATCGGTGATTCCAGATTCACCTAGCCAATTGTTATTGGGTACTTTGTCTGCAGAGCGGATTCTCGATCAAACCGGAAACGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

73

Amino Acids

8.18

Weight (kDa)

9.69

Isoelectric Point (pI)

57.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 193
AciI CCGC 1 cut(s) 193
AfaI GTAC 2 cut(s) 132, 178
AfiI CCNNNNNNNGG 1 cut(s) 117
ApeKI GCWGC 1 cut(s) 94
AspLEI GCGC 1 cut(s) 99
AsuHPI GGTGA 4 cut(s) 27, 34, 147, 154
BbvI GCAGC 1 cut(s) 106
BfaI CTAG 1 cut(s) 159
BfmI CTRYAG 1 cut(s) 186
BisI GCNGC 1 cut(s) 95
BlsI GCNGC 1 cut(s) 96
BsaWI WCCGGW 1 cut(s) 209
Bsc4I CCNNNNNNNGG 1 cut(s) 117
BseLI CCNNNNNNNGG 1 cut(s) 117
BseRI GAGGAG 1 cut(s) 104
BseXI GCAGC 1 cut(s) 106
BsiSI CCGG 1 cut(s) 210
BslI CCNNNNNNNGG 1 cut(s) 117
Bsp143I GATC 2 cut(s) 12, 202
BspACI CCGC 1 cut(s) 193
BspMAI CTGCAG 1 cut(s) 190
BsrBI CCGCTC 1 cut(s) 193
BssMI GATC 2 cut(s) 12, 202
Bst4CI ACNGT 1 cut(s) 62
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 2 cut(s) 15, 205
BstMBI GATC 2 cut(s) 12, 202
BstSFI CTRYAG 1 cut(s) 186
BstV1I GCAGC 1 cut(s) 106
CfoI GCGC 1 cut(s) 99
Csp6I GTAC 2 cut(s) 131, 177
CviJI RGCY 2 cut(s) 29, 162
CviKI_1 RGCY 2 cut(s) 29, 162
CviQI GTAC 2 cut(s) 131, 177
DpnI GATC 2 cut(s) 14, 204
DpnII GATC 2 cut(s) 12, 202
FaiI YATR 4 cut(s) 26, 67, 69, 220
Fnu4HI GCNGC 1 cut(s) 95
Fsp4HI GCNGC 1 cut(s) 95
FspBI CTAG 1 cut(s) 159
GlaI GCGC 1 cut(s) 98
GluI GCNGC 1 cut(s) 95
HapII CCGG 1 cut(s) 210
HhaI GCGC 1 cut(s) 99
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HinfI GANTC 3 cut(s) 145, 152, 196
HpaII CCGG 1 cut(s) 210
HphI GGTGA 4 cut(s) 27, 34, 147, 154
Hpy188I TCNGA 1 cut(s) 17
Hpy188III TCNNGA 2 cut(s) 149, 200
HpyAV CCTTC 1 cut(s) 74
HpyCH4III ACNGT 1 cut(s) 62
HpyCH4V TGCA 1 cut(s) 188
HspAI GCGC 1 cut(s) 97
Kzo9I GATC 2 cut(s) 12, 202
LmnI GCTCC 2 cut(s) 75, 91
LpnPI CCDG 2 cut(s) 124, 162
Lsp1109I GCAGC 1 cut(s) 106
MaeI CTAG 1 cut(s) 159
MalI GATC 2 cut(s) 14, 204
MbiI CCGCTC 1 cut(s) 193
MboI GATC 2 cut(s) 12, 202
MboII GAAGA 1 cut(s) 133
MfeI CAATTG 1 cut(s) 164
MluCI AATT 3 cut(s) 54, 125, 164
MnlI CCTC 2 cut(s) 82, 111
MspI CCGG 1 cut(s) 210
MunI CAATTG 1 cut(s) 164
NdeII GATC 2 cut(s) 12, 202
PfeI GAWTC 3 cut(s) 145, 152, 196
PkrI GCNGC 1 cut(s) 96
PstI CTGCAG 1 cut(s) 190
RsaI GTAC 2 cut(s) 132, 178
RsaNI GTAC 2 cut(s) 131, 177
SatI GCNGC 1 cut(s) 95
Sau3AI GATC 2 cut(s) 12, 202
SetI ASST 1 cut(s) 160
SfcI CTRYAG 1 cut(s) 186
SgeI CNNG 4 cut(s) 123, 161, 171, 212
Sse9I AATT 3 cut(s) 54, 125, 164
SsiI CCGC 1 cut(s) 193
SspMI CTAG 1 cut(s) 159
TaaI ACNGT 1 cut(s) 62
TaqI TCGA 1 cut(s) 201
TasI AATT 3 cut(s) 54, 125, 164
TfiI GAWTC 3 cut(s) 145, 152, 196
TseI GCWGC 1 cut(s) 94
TspDTI ATGAA 2 cut(s) 21, 54
XspI CTAG 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.