RchiOBHm_Chr5g0079701

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
85424800 .. 85428115
3316 bp
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UTR
Exon/CDS
Intron
PRQ35407

Sequence Viewer

Length: 195 bp
ATGATCGGAGGAGAGATGGCTTCATCACTATTCACCCCACTCTCAATCTACGGTTCATATAAAAGGAGAAAAGGGAAAGAGGAGCAGAGCAAATTCAAACCCAGAAAGAGGAAAAAATTGGTATCAAAATCGGTGATTGCAGAAAAGGTATTGTGTGCAGAGTGGATTCTCGATCAAACCCAAAAGGCAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

64

Amino Acids

7.33

Weight (kDa)

9.94

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 92
AfiI CCNNNNNNNGG 1 cut(s) 108
AgsI TTSAA 1 cut(s) 97
ApoI RAATTY 1 cut(s) 92
AsuHPI GGTGA 2 cut(s) 25, 145
BccI CCATC 1 cut(s) 10
Bsc4I CCNNNNNNNGG 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 108
BseRI GAGGAG 2 cut(s) 24, 95
BsgI GTGCAG 1 cut(s) 177
BslI CCNNNNNNNGG 1 cut(s) 108
Bsp143I GATC 2 cut(s) 3, 172
BssMI GATC 2 cut(s) 3, 172
Bst4CI ACNGT 1 cut(s) 53
BstKTI GATC 2 cut(s) 6, 175
BstMBI GATC 2 cut(s) 3, 172
CviJI RGCY 1 cut(s) 20
CviKI_1 RGCY 1 cut(s) 20
DpnI GATC 2 cut(s) 5, 174
DpnII GATC 2 cut(s) 3, 172
FaiI YATR 2 cut(s) 58, 60
HinfI GANTC 1 cut(s) 166
HphI GGTGA 2 cut(s) 25, 145
Hpy188I TCNGA 1 cut(s) 8
Hpy188III TCNNGA 1 cut(s) 170
HpyCH4III ACNGT 1 cut(s) 53
HpyCH4V TGCA 2 cut(s) 140, 158
Kzo9I GATC 2 cut(s) 3, 172
LmnI GCTCC 1 cut(s) 82
LpnPI CCDG 1 cut(s) 115
MalI GATC 2 cut(s) 5, 174
MboI GATC 2 cut(s) 3, 172
MluCI AATT 2 cut(s) 92, 116
MnlI CCTC 2 cut(s) 73, 102
NdeII GATC 2 cut(s) 3, 172
PfeI GAWTC 1 cut(s) 166
Sau3AI GATC 2 cut(s) 3, 172
SetI ASST 1 cut(s) 150
SgeI CNNG 2 cut(s) 114, 182
Sse9I AATT 2 cut(s) 92, 116
TaaI ACNGT 1 cut(s) 53
TaqI TCGA 1 cut(s) 171
TasI AATT 2 cut(s) 92, 116
TfiI GAWTC 1 cut(s) 166
TspDTI ATGAA 2 cut(s) 12, 45
XapI RAATTY 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.