RchiOBHm_Chr1g0357651

Ring finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001668
Physical Location & Seq
Reverse (-)
49980988 .. 49985151
4164 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58287

Sequence Viewer

Length: 1800 bp
ATGACCAATTCCAACACCGCCTTCGCCAAAACCATCTGCTCCATCTGCTACGAAGACCTCAACCCCGTCTCCGAGGATCTCCAATCCATCTCCCTCTGCGGCCACGTCTTCCACGAGCTCTGTTTGCAGCAGTGGTTCGAGTACTCGTCGAACAACAAGTGTAGTTGCCCGGTGTGCAAGCAGAGCTGCAAGGCGAGCGATGCCGGCCGGCTTTATTTCCAGTCGGTGGATCCGAGTAGCACTCAGCGACCGGTTGTTGAGTGTGAGGACGAGGACGCCGCGGCATTGCGCCAAGAGGTGCAGAGGTTGGAGTCCAAGACGATTGTGCTTACTTCGGCATTGGACCGGCAGGGGCAGAGTCTCAAGGATCTCACCGACGAGCTTTGTTTGTGCAAGGAGCAGGCAAAGAAAGAAGTAGCATCAAAGAATGATGCAGTGGCATCAAAGAATGAAGCCTTGAAACAACAAGCATCCATGGAACGGATGCTTCGTATGAAATCTGGGGAGCTTGATAAGGTAACTATGGAGTGCTTGAGGTTGCAAGAAAAGAATATGAAATTGGCCAAGGAGCTTGCAGCATTCAAATTGGTATCTGACTTTGATCTAAAAGAAGAGGATGTCTTAAACTATGCAGCTCTTGGTAATGGGGTGAACAACAAAGAATCGATAGATAGCCTAAAAAAGTCCTTGTTGTCGCGTGAAAGGGTTTACCAGGTCCATGCCAAAAAAATGACGGCTAGATACAATGAATTGATGAAAAAGCACAGAGATCTGGCACATGAAAAGGCTCGTTCTAGTGAAGAACTAGAGAAGGCTAAAGAAAAGATGAATACATTAAAGACAAGGGTACAAGAATTGGAGAGTGCGGTTGAAGTCAAGGACAATGAAGTTTTGAGGGCTTTAAAAGCTTCAAGGGAAACTCGAGGGCAAAGAGTTATTCAGAATAATGTTAGTTGTAAATCTGATTCTGTATCCGTCAACAATTCATCAGAAGATCAAAGCAAACAGTTTGCTCCAATGCATAAATTTGATAGGATAGGAAGCTTGCCAAATGATCTACTGTGCCAGACAGTACACTTCAATTTCATTAGCCCTATGGATGCAAATTCTACTAAAGATGGTACAAGTACCAGTGCTGATGATGAAGAAAGAGATCCCTACTCCTTAATTGATGATGATGCTTCAAAATTTTCCACAACTAGACATGAACTTTCAAATGCCAATGTGAAAAACCCACTCTGTGAGCATAGAACTAGCCAGAAGTCTAGTATGTTGAGACCAGGGGCTGCTTCTGATTCAATCAATGAAACTTCAGTCTGTAGACTAAGAAATCTGGACGAGCCTTTGGGCTCAATAACTGGTAAAATGACTCATATTTCCAAGTCTCCTGCTGCTGATGTTGTGATTCTTGATGATGTAGAAGAAGTCTCCCCGGTGCTTAACATTATACAGGAATCTCCCATCACACAAGCACTTCCCAGACAAGGGGTTGCAGGCTCTTCTGGTGGCTTGCTTGGTCTTGATGGAGCAAACAGGTTGGGAAAATGGTGCAAGCAGACTGTAAACAATGGATCTGTAACAAGGCAAGACTCAACGGCAAATAAAAGTGATTTGATTGCTGTAGGAACTGACGGAAGAGGTGGAAGAATCAAAGTTCTGAGATCTCATAATCAATCAACATTGGATAGTAAGTCAAATTCACGGGGACCAAAGAGATGCAAATATGGAGCTAAGACAAATAGACTGCAGTCCCAAGGGTGCTTGCAAATGGAACACTTCTTCGGAAGATCTGGTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

599

Amino Acids

66.39

Weight (kDa)

7.76

Isoelectric Point (pI)

49.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 12 - 60 1.1e-08 Ring finger domain
zf-RING_UBOX PF13445 13 - 57 2.4e-07 RING-type zinc-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 226
AccI GTMKAC 1 cut(s) 1321
AccII CGCG 2 cut(s) 281, 697
AciI CCGC 5 cut(s) 18, 99, 279, 281, 866
AclWI GGATC 6 cut(s) 84, 224, 237, 375, 1148, 1579
AcoI YGGCCR 3 cut(s) 100, 205, 561
AcsI RAATTY 4 cut(s) 1025, 1105, 1187, 1696
AcuI CTGAAG 1 cut(s) 1296
AcyI GRCGYC 1 cut(s) 276
AdeI CACNNNGTG 1 cut(s) 1241
AfaI GTAC 5 cut(s) 143, 849, 1074, 1123, 1129
AfiI CCNNNNNNNGG 4 cut(s) 226, 480, 1484, 1485
AgeI ACCGGT 1 cut(s) 250
AgsI TTSAA 8 cut(s) 460, 583, 872, 912, 1081, 1185, 1215, 1299
AjiI CACGTC 1 cut(s) 106
AjnI CCWGG 2 cut(s) 711, 1279
AjuI GAANNNNNNNTTGG 3 cut(s) 37, 542, 574
AluBI AGCT 9 cut(s) 118, 186, 382, 508, 571, 635, 908, 1044, 1730
AluI AGCT 9 cut(s) 118, 186, 382, 508, 571, 635, 908, 1044, 1730
Alw21I GWGCWC 1 cut(s) 120
Alw26I GTCTC 5 cut(s) 73, 365, 1270, 1389, 1432
AlwI GGATC 6 cut(s) 84, 224, 237, 375, 1148, 1579
AlwNI CAGNNNCTG 1 cut(s) 1286
Ama87I CYCGRG 1 cut(s) 921
AoxI GGCC 3 cut(s) 100, 205, 561
ApeKI GCWGC 6 cut(s) 127, 186, 575, 632, 1286, 1391
ApoI RAATTY 4 cut(s) 1025, 1105, 1187, 1696
AsiGI ACCGGT 1 cut(s) 250
AspLEI GCGC 1 cut(s) 291
AspS9I GGNCC 3 cut(s) 343, 715, 1706
AsuC2I CCSGG 2 cut(s) 170, 1433
AsuHPI GGTGA 2 cut(s) 364, 661
AvaI CYCGRG 1 cut(s) 921
AvaII GGWCC 3 cut(s) 343, 715, 1706
BalI TGGCCA 1 cut(s) 563
BamHI GGATCC 1 cut(s) 229
BanII GRGCYC 2 cut(s) 120, 1352
BauI CACGAG 1 cut(s) 113
BbsI GAAGAC 2 cut(s) 60, 100
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 6 cut(s) 139, 173, 587, 644, 1273, 1378
BccI CCATC 6 cut(s) 41, 50, 95, 1112, 1469, 1517
BceAI ACGGC 2 cut(s) 750, 1611
BciT130I CCWGG 2 cut(s) 713, 1281
BciVI GTATCC 1 cut(s) 982
BcnI CCSGG 2 cut(s) 170, 1433
BcoDI GTCTC 5 cut(s) 73, 365, 1270, 1389, 1432
BfaI CTAG 6 cut(s) 738, 795, 806, 1200, 1254, 1266
BfmI CTRYAG 3 cut(s) 1318, 1620, 1745
BfuI GTATCC 1 cut(s) 982
BglII AGATCT 3 cut(s) 769, 1661, 1787
BisI GCNGC 9 cut(s) 100, 128, 187, 279, 282, 576, 633, 1287, 1392
BlsI GCNGC 9 cut(s) 101, 129, 188, 280, 283, 577, 634, 1288, 1393
BmcAI AGTACT 1 cut(s) 143
Bme1390I CCNGG 4 cut(s) 170, 713, 1281, 1433
Bme18I GGWCC 3 cut(s) 343, 715, 1706
BmeT110I CYCGRG 1 cut(s) 921
BmgBI CACGTC 1 cut(s) 106
BmgT120I GGNCC 3 cut(s) 343, 715, 1706
BmiI GGNNCC 2 cut(s) 231, 1707
BmrFI CCNGG 4 cut(s) 170, 713, 1281, 1433
BmsI GCATC 9 cut(s) 190, 421, 428, 449, 474, 479, 1090, 1168, 1706
BoxI GACNNNNGTC 1 cut(s) 1747
BpiI GAAGAC 2 cut(s) 60, 100
BplI GAGNNNNNCTC 2 cut(s) 226, 258
BpuEI CTTGAG 2 cut(s) 347, 553
BpuMI CCSGG 2 cut(s) 170, 1433
Bsa29I ATCGAT 1 cut(s) 665
BsaHI GRCGYC 1 cut(s) 276
BsaI GGTCTC 1 cut(s) 1270
BsaJI CCNNGG 7 cut(s) 72, 279, 474, 564, 1280, 1431, 1753
BsaWI WCCGGW 1 cut(s) 250
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 480, 1484, 1485
Bse118I RCCGGY 4 cut(s) 203, 207, 250, 345
Bse1I ACTGG 3 cut(s) 220, 1131, 1363
Bse3DI GCAATG 1 cut(s) 284
BseBI CCWGG 2 cut(s) 713, 1281
BseCI ATCGAT 1 cut(s) 665
BseDI CCNNGG 7 cut(s) 72, 279, 474, 564, 1280, 1431, 1753
BseGI GGATG 4 cut(s) 470, 489, 622, 1105
BseLI CCNNNNNNNGG 4 cut(s) 226, 480, 1484, 1485
BseMI GCAATG 1 cut(s) 284
BseMII CTCAG 2 cut(s) 257, 1649
BseNI ACTGG 3 cut(s) 220, 1131, 1363
BseX3I CGGCCG 1 cut(s) 205
BseXI GCAGC 6 cut(s) 139, 173, 587, 644, 1273, 1378
BsgI GTGCAG 1 cut(s) 320
Bsh1236I CGCG 2 cut(s) 281, 697
Bsh1285I CGRYCG 2 cut(s) 208, 251
BshFI GGCC 3 cut(s) 102, 207, 563
BshTI ACCGGT 1 cut(s) 250
BshVI ATCGAT 1 cut(s) 665
BsiEI CGRYCG 2 cut(s) 208, 251
BsiHKAI GWGCWC 1 cut(s) 120
BsiHKCI CYCGRG 1 cut(s) 921
BsiSI CCGG 6 cut(s) 170, 204, 208, 251, 346, 1433
BslFI GGGAC 2 cut(s) 1719, 1735
BslI CCNNNNNNNGG 4 cut(s) 226, 480, 1484, 1485
BsmAI GTCTC 5 cut(s) 73, 365, 1270, 1389, 1432
BsmBI CGTCTC 1 cut(s) 73
BsmFI GGGAC 2 cut(s) 1719, 1735
BsmI GAATGC 1 cut(s) 578
BsnI GGCC 3 cut(s) 102, 207, 563
Bso31I GGTCTC 1 cut(s) 1270
BsoBI CYCGRG 1 cut(s) 921
Bsp1286I GDGCHC 2 cut(s) 120, 1352
Bsp19I CCATGG 1 cut(s) 474
BspACI CCGC 5 cut(s) 18, 99, 279, 281, 866
BspANI GGCC 3 cut(s) 102, 207, 563
BspCNI CTCAG 2 cut(s) 256, 1650
BspDI ATCGAT 1 cut(s) 665
BspFNI CGCG 2 cut(s) 281, 697
BspLI GGNNCC 2 cut(s) 231, 1707
BspMAI CTGCAG 1 cut(s) 1749
BspPI GGATC 6 cut(s) 84, 224, 237, 375, 1148, 1579
BspQI GCTCTTC 1 cut(s) 1504
BspTNI GGTCTC 1 cut(s) 1270
BsrDI GCAATG 1 cut(s) 284
BsrFI RCCGGY 4 cut(s) 203, 207, 250, 345
BsrI ACTGG 3 cut(s) 220, 1131, 1363
BssAI RCCGGY 4 cut(s) 203, 207, 250, 345
BssECI CCNNGG 7 cut(s) 72, 279, 474, 564, 1280, 1431, 1753
BssNI GRCGYC 1 cut(s) 276
BssSI CACGAG 1 cut(s) 113
BssT1I CCWWGG 3 cut(s) 474, 564, 1753
Bst2BI CACGAG 1 cut(s) 113
Bst2UI CCWGG 2 cut(s) 713, 1281
Bst4CI ACNGT 4 cut(s) 1008, 1062, 1072, 1561
Bst6I CTCTTC 3 cut(s) 606, 1504, 1630
BstACI GRCGYC 1 cut(s) 276
BstDEI CTNAG 4 cut(s) 243, 1325, 1658, 1731
BstDSI CCRYGG 2 cut(s) 279, 474
BstF5I GGATG 4 cut(s) 470, 489, 622, 1105
BstFNI CGCG 2 cut(s) 281, 697
BstHHI GCGC 1 cut(s) 291
BstMAI GTCTC 5 cut(s) 73, 365, 1270, 1389, 1432
BstMCI CGRYCG 2 cut(s) 208, 251
BstMWI GCNNNNNNNGC 8 cut(s) 45, 124, 174, 183, 195, 200, 204, 905
BstNI CCWGG 2 cut(s) 713, 1281
BstPAI GACNNNNGTC 1 cut(s) 1747
BstSCI CCNGG 4 cut(s) 168, 711, 1279, 1431
BstSFI CTRYAG 3 cut(s) 1318, 1620, 1745
BstUI CGCG 2 cut(s) 281, 697
BstV1I GCAGC 6 cut(s) 139, 173, 587, 644, 1273, 1378
BstV2I GAAGAC 2 cut(s) 60, 100
BstX2I RGATCY 8 cut(s) 76, 229, 367, 769, 1153, 1571, 1661, 1787
BstYI RGATCY 8 cut(s) 76, 229, 367, 769, 1153, 1571, 1661, 1787
BstZI CGGCCG 1 cut(s) 205
Bsu15I ATCGAT 1 cut(s) 665
BsuI GTATCC 1 cut(s) 982
BsuRI GGCC 3 cut(s) 102, 207, 563
BsuTUI ATCGAT 1 cut(s) 665
BtgI CCRYGG 2 cut(s) 279, 474
BtgZI GCGATG 1 cut(s) 213
BtrI CACGTC 1 cut(s) 106
BtsCI GGATG 4 cut(s) 470, 489, 622, 1105
BtsI GCAGTG 2 cut(s) 137, 441
BtsIMutI CAGTG 3 cut(s) 137, 441, 1138
CaiI CAGNNNCTG 1 cut(s) 1286
CfoI GCGC 1 cut(s) 291
Cfr10I RCCGGY 4 cut(s) 203, 207, 250, 345
Cfr13I GGNCC 3 cut(s) 343, 715, 1706
Cfr42I CCGCGG 1 cut(s) 282
ClaI ATCGAT 1 cut(s) 665
CseI GACGC 1 cut(s) 284
CsiI ACCWGGT 1 cut(s) 711
Csp6I GTAC 5 cut(s) 142, 848, 1073, 1122, 1128
CspAI ACCGGT 1 cut(s) 250
CviAII CATG 4 cut(s) 475, 719, 779, 1205
CviQI GTAC 5 cut(s) 142, 848, 1073, 1122, 1128
DdeI CTNAG 4 cut(s) 243, 1325, 1658, 1731
DraI TTTAAA 1 cut(s) 903
DraIII CACNNNGTG 1 cut(s) 1241
EaeI YGGCCR 3 cut(s) 100, 205, 561
EagI CGGCCG 1 cut(s) 205
Eam1104I CTCTTC 3 cut(s) 606, 1504, 1630
EarI CTCTTC 3 cut(s) 606, 1504, 1630
Ecl136II GAGCTC 1 cut(s) 118
EclXI CGGCCG 1 cut(s) 205
Eco130I CCWWGG 3 cut(s) 474, 564, 1753
Eco24I GRGCYC 2 cut(s) 120, 1352
Eco31I GGTCTC 1 cut(s) 1270
Eco47I GGWCC 3 cut(s) 343, 715, 1706
Eco52I CGGCCG 1 cut(s) 205
Eco53kI GAGCTC 1 cut(s) 118
Eco57I CTGAAG 1 cut(s) 1296
Eco88I CYCGRG 1 cut(s) 921
EcoICRI GAGCTC 1 cut(s) 118
EcoRII CCWGG 2 cut(s) 711, 1279
EcoT14I CCWWGG 3 cut(s) 474, 564, 1753
EcoT22I ATGCAT 1 cut(s) 1023
EcoT38I GRGCYC 2 cut(s) 120, 1352
ErhI CCWWGG 3 cut(s) 474, 564, 1753
Esp3I CGTCTC 1 cut(s) 73
FaeI CATG 4 cut(s) 478, 722, 782, 1208
FaqI GGGAC 2 cut(s) 1719, 1735
FatI CATG 4 cut(s) 474, 718, 778, 1204
FblI GTMKAC 1 cut(s) 1321
Fnu4HI GCNGC 9 cut(s) 100, 128, 187, 279, 282, 576, 633, 1287, 1392
FokI GGATG 4 cut(s) 457, 496, 629, 1112
FriOI GRGCYC 2 cut(s) 120, 1352
Fsp4HI GCNGC 9 cut(s) 100, 128, 187, 279, 282, 576, 633, 1287, 1392
FspBI CTAG 6 cut(s) 738, 795, 806, 1200, 1254, 1266
GlaI GCGC 1 cut(s) 290
GluI GCNGC 9 cut(s) 100, 128, 187, 279, 282, 576, 633, 1287, 1392
HaeIII GGCC 3 cut(s) 102, 207, 563
HapII CCGG 6 cut(s) 170, 204, 208, 251, 346, 1433
HgaI GACGC 1 cut(s) 284
HhaI GCGC 1 cut(s) 291
Hin1I GRCGYC 1 cut(s) 276
Hin1II CATG 4 cut(s) 478, 722, 782, 1208
Hin6I GCGC 1 cut(s) 289
HinP1I GCGC 1 cut(s) 289
HincII GTYRAC 1 cut(s) 979
HindII GTYRAC 1 cut(s) 979
HindIII AAGCTT 2 cut(s) 906, 1042
HpaII CCGG 6 cut(s) 170, 204, 208, 251, 346, 1433
HphI GGTGA 2 cut(s) 364, 661
Hpy166II GTNNAC 6 cut(s) 652, 709, 979, 1075, 1322, 1564
Hpy188I TCNGA 9 cut(s) 73, 234, 595, 942, 964, 991, 1294, 1659, 1784
Hpy188III TCNNGA 3 cut(s) 1334, 1409, 1520
Hpy8I GTNNAC 6 cut(s) 652, 709, 979, 1075, 1322, 1564
Hpy99I CGWCG 2 cut(s) 151, 380
HpyAV CCTTC 2 cut(s) 31, 805
HpyCH4III ACNGT 4 cut(s) 1008, 1062, 1072, 1561
HpyCH4IV ACGT 1 cut(s) 105
HpyF10VI GCNNNNNNNGC 8 cut(s) 45, 124, 174, 183, 195, 200, 204, 905
HpyF3I CTNAG 4 cut(s) 243, 1325, 1658, 1731
HpySE526I ACGT 1 cut(s) 105
Hsp92I GRCGYC 1 cut(s) 276
Hsp92II CATG 4 cut(s) 478, 722, 782, 1208
HspAI GCGC 1 cut(s) 289
KroI GCCGGC 2 cut(s) 203, 207
KroNI GCCGGC 2 cut(s) 205, 209
KspI CCGCGG 1 cut(s) 282
LguI GCTCTTC 1 cut(s) 1504
LmnI GCTCC 7 cut(s) 44, 397, 505, 568, 1018, 1526, 1727
Lsp1109I GCAGC 6 cut(s) 139, 173, 587, 644, 1273, 1378
LweI GCATC 9 cut(s) 190, 421, 428, 449, 474, 479, 1090, 1168, 1706
MabI ACCWGGT 1 cut(s) 711
MaeI CTAG 6 cut(s) 738, 795, 806, 1200, 1254, 1266
MaeII ACGT 1 cut(s) 105
MaeIII GTNAC 2 cut(s) 517, 1576
MflI RGATCY 8 cut(s) 76, 229, 367, 769, 1153, 1571, 1661, 1787
MhlI GDGCHC 2 cut(s) 120, 1352
MlsI TGGCCA 1 cut(s) 563
MluNI TGGCCA 1 cut(s) 563
MlyI GAGTC 4 cut(s) 320, 367, 1363, 1583
MmeI TCCRAC 2 cut(s) 36, 288
Mox20I TGGCCA 1 cut(s) 563
Mph1103I ATGCAT 1 cut(s) 1023
MroNI GCCGGC 2 cut(s) 203, 207
MscI TGGCCA 1 cut(s) 563
MseI TTAA 5 cut(s) 623, 836, 902, 1166, 1440
Msp20I TGGCCA 1 cut(s) 563
MspA1I CMGCKG 1 cut(s) 281
MspI CCGG 6 cut(s) 170, 204, 208, 251, 346, 1433
MspR9I CCNGG 4 cut(s) 170, 713, 1281, 1433
Mva1269I GAATGC 1 cut(s) 578
MvaI CCWGG 2 cut(s) 713, 1281
MvnI CGCG 2 cut(s) 281, 697
MwoI GCNNNNNNNGC 8 cut(s) 45, 124, 174, 183, 195, 200, 204, 905
NaeI GCCGGC 2 cut(s) 205, 209
NciI CCSGG 2 cut(s) 170, 1433
NcoI CCATGG 1 cut(s) 474
NgoMIV GCCGGC 2 cut(s) 203, 207
NlaIII CATG 4 cut(s) 478, 722, 782, 1208
NlaIV GGNNCC 2 cut(s) 231, 1707
NsiI ATGCAT 1 cut(s) 1023
PaeR7I CTCGAG 1 cut(s) 921
PciSI GCTCTTC 1 cut(s) 1504
PcsI WCGNNNNNNNCGW 3 cut(s) 111, 230, 487
PctI GAATGC 1 cut(s) 578
PdiI GCCGGC 2 cut(s) 205, 209
PfeI GAWTC 6 cut(s) 662, 965, 1295, 1405, 1454, 1647
PflMI CCANNNNNTGG 1 cut(s) 226
PinAI ACCGGT 1 cut(s) 250
PkrI GCNGC 9 cut(s) 101, 129, 188, 280, 283, 577, 634, 1288, 1393
PleI GAGTC 4 cut(s) 319, 366, 1363, 1583
PpsI GAGTC 4 cut(s) 319, 366, 1363, 1583
PshAI GACNNNNGTC 1 cut(s) 1747
Psp124BI GAGCTC 1 cut(s) 120
Psp6I CCWGG 2 cut(s) 711, 1279
PspGI CCWGG 2 cut(s) 711, 1279
PspN4I GGNNCC 2 cut(s) 231, 1707
PspPI GGNCC 3 cut(s) 343, 715, 1706
PspXI VCTCGAGB 1 cut(s) 921
PstI CTGCAG 1 cut(s) 1749
PstNI CAGNNNCTG 1 cut(s) 1286
PsuI RGATCY 8 cut(s) 76, 229, 367, 769, 1153, 1571, 1661, 1787
RsaI GTAC 5 cut(s) 143, 849, 1074, 1123, 1129
RsaNI GTAC 5 cut(s) 142, 848, 1073, 1122, 1128
SacI GAGCTC 1 cut(s) 120
SacII CCGCGG 1 cut(s) 282
SapI GCTCTTC 1 cut(s) 1504
SaqAI TTAA 5 cut(s) 623, 836, 902, 1166, 1440
SatI GCNGC 9 cut(s) 100, 128, 187, 279, 282, 576, 633, 1287, 1392
Sau96I GGNCC 3 cut(s) 343, 715, 1706
ScaI AGTACT 1 cut(s) 143
SchI GAGTC 4 cut(s) 320, 367, 1363, 1583
ScrFI CCNGG 4 cut(s) 170, 713, 1281, 1433
SduI GDGCHC 2 cut(s) 120, 1352
SexAI ACCWGGT 1 cut(s) 711
SfaNI GCATC 9 cut(s) 190, 421, 428, 449, 474, 479, 1090, 1168, 1706
SfcI CTRYAG 3 cut(s) 1318, 1620, 1745
Sfr274I CTCGAG 1 cut(s) 921
Sfr303I CCGCGG 1 cut(s) 282
SgrBI CCGCGG 1 cut(s) 282
SinI GGWCC 3 cut(s) 343, 715, 1706
SlaI CTCGAG 1 cut(s) 921
SmlI CTYRAG 3 cut(s) 362, 532, 921
SmoI CTYRAG 3 cut(s) 362, 532, 921
SsiI CCGC 5 cut(s) 18, 99, 279, 281, 866
SspMI CTAG 6 cut(s) 738, 795, 806, 1200, 1254, 1266
SstI GAGCTC 1 cut(s) 120
StyD4I CCNGG 4 cut(s) 168, 711, 1279, 1431
StyI CCWWGG 3 cut(s) 474, 564, 1753
TaaI ACNGT 4 cut(s) 1008, 1062, 1072, 1561
TaiI ACGT 1 cut(s) 108
TaqI TCGA 4 cut(s) 138, 149, 665, 922
TatI WGTACW 2 cut(s) 141, 1072
TauI GCSGC 3 cut(s) 102, 281, 284
TfiI GAWTC 6 cut(s) 662, 965, 1295, 1405, 1454, 1647
Tru1I TTAA 5 cut(s) 623, 836, 902, 1166, 1440
Tru9I TTAA 5 cut(s) 623, 836, 902, 1166, 1440
TscAI CASTG 3 cut(s) 137, 441, 1138
TseI GCWGC 6 cut(s) 127, 186, 575, 632, 1286, 1391
TspGWI ACGGA 3 cut(s) 496, 964, 1647
TspRI CASTG 3 cut(s) 137, 441, 1138
Van91I CCANNNNNTGG 1 cut(s) 226
VpaK11BI GGWCC 3 cut(s) 343, 715, 1706
XapI RAATTY 4 cut(s) 1025, 1105, 1187, 1696
XhoI CTCGAG 1 cut(s) 921
XmiI GTMKAC 1 cut(s) 1321
XspI CTAG 6 cut(s) 738, 795, 806, 1200, 1254, 1266
ZrmI AGTACT 1 cut(s) 143
Zsp2I ATGCAT 1 cut(s) 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.