Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0001668

Physical Location & Seq

Genomic Coordinates Forward (+)

18445266 .. 18449343

Gene Structure 4078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00298670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGACCAATTCCAACACCGCCTTCGCCAAAACCATCTGCTCCATCTGCTACGAAGACCTCAAACCCGTCTCCGAGGATCTCCAATCCATCTCCATCTGCGGCCACGTCTTCCACGAGCTCTGTTTGCAGCAGTGGTTCGAGTACTCGTCGAACAACAAGTGTAGTTGCCCGGTGTGCAAGCAGGGCTGCAAGGCGAGCGATGCCGGCCGGCTTTATTTCCAGTCGGTGGATCCGAGTAGCACTCAGCGACCGGTTGTTGAGTGTGAGGAGGAGGACGCCGAGGCATTGCGCCAAGAGGTGCAGAGGTTGGAGTCCAAGACGATTGTGCTTACTTCGGCATTGGACCGGCAGGGGCAGAGTCTCAAGGATCTCACCGACCAGCTTTGTTTGTGCAAGGAGCAGGCAAAGAAAGAAGTAGCATCAAAGAATGATGCAGTGGCATCAAAGAATGAAGCTTTGAAACAACAAGCATCCATGGAACGGATGCTTCGTATGAAATCTGGGGAGCTTGATAAGGTAACTATGGAGTGCTTGAGGTTGCAAGAAAAGAATATGAAATTGGCCAAGGAGCTTGCAGCATTCAAATTGGTTTACCAGGTCCATGCCAAAAAAATGACGGCTAGATACAATGAATTGATGAAAAAGCACAGAGATCTGGCACATGAAAAGGCTCGTTCTAGTGAAGAACTAGAGAAGGCTAAAGAAAAGATGAATACATTAAAGACAAGGGTACAAGAATTGGAGAGTGCGGTTGAAGTCAAGGACAATGAAGTTTTGAGGGCTTTAAAAGCTTCAAGGGAAACTCGAGGGAAAGAGTTATTCAGAATAATGATAGGAAGCTTGCCAAATGATCCACTGTGCCAGACAGTACACTTCAATTTCATTAGCCCTATGGATGCAAATTCTACTAGAGATGGTACAAGTACCAGTGCTGATGATGAAGAAGGAGATCCCTACTCTTTAATTGATGATGATGCTTCAAAATTTTCCACAACTAGACATGAACTTTCAAATGCCAATGTGAAAAACCCACTCTGTGAGCATAGAACTAGCCAGAAGTCTAGTATGTTGAGACCAGGGGCTGCTTCTGATTCAATCAATGAAATTTCAGTCTGTAGACTAAGAAATCTGGACGAGCCTTTGGGCTCAATAACTGGTAAAATGACTCATATTTCCAAGTCTCCTGCTGCTGATGTTGTGATTCTTGATGATGTAGAAGAAGTCTCCCCAGTGCTTAACATTATAAAGGAATCTCCCATCACACAAGCACTTCCCAGACAAGGGGTTGCAGGCTCTTCTGGTGGCTTGCTTGGTCTTGATGGAGCAAACAGGTTGGGAAAATGGTGCAAGCAGAGTGTAAACAATGGATCTGTAACAAGGCAAGACTCAACGGCAGATAAAAGTGATTTGATTGCCGTAGGAACTGACGGAAGAGGTGGAAGAATCAAAGTTCTGAGATCTCATAATCAATCAACATTGGTGAGGATAGTAAGTCAAATTCACGGGGACCAAAGAGATGCAAATATGGAGCTAAGACAAATAGACTGCAGTCCCAAGGGTGCTTGCAAATGGAACACTTCTTCGGAAGATCTGGTCAATAATCAAAGTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

537

Amino Acids

59.49

Weight (kDa)

6.46

Isoelectric Point (pI)

46.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	12 - 60	1.7e-08	Ring finger domain
zf-RING_UBOX	PF13445	13 - 57	7.6e-07	RING-type zinc-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001668)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01245 AT4G01270
fragaria_vesca	FvH4_1g19860 FvH4_1g19860 FvH4_1g19860 FvH4_1g19860 FvH4_7g15320 FvH4_7g15320 FvH4_7g15320 FvH4_7g15320 FvH4_7g15320
malus_domestica	MD01G1070500.v1.1 MD01G1070600.v1.1 MD01G1071100.v1.1
prunus_persica	Prupe.2G177000_v2.0.a1 Prupe.2G177000_v2.0.a1 Prupe.2G177000_v2.0.a1 Prupe.2G177000_v2.0.a1 Prupe.2G177000_v2.0.a1 Prupe.2G177000_v2.0.a1 Prupe.2G177000_v2.0.a1 Prupe.2G177000_v2.0.a1 Prupe.2G177000_v2.0.a1 Prupe.2G177100_v2.0.a1 Prupe.2G177100_v2.0.a1
pyrus_communis	pycom01g09970 pycom01g10000 pycom07g12860
rosa_chinensis	RchiOBHm_Chr1g0357651 RchiOBHm_Chr2g0111671
rosa_laevigata	RLG00000017916 RLG00000028011
rosa_multiflora	Rmu_sc0004683.1_g000004 Rmu_sc0005791.1_g000023
rosa_roxburghii	Rroxscaffold_2G00132180 Rroxscaffold_4G00298670
rosa_rugosa	Rorug01G0257400 Rorug02G0175300 Rorug02G0175400
rosa_samantha	Rh1AG271400 Rh1BG238300 Rh1CG255200 Rh1DG266600 Rh2AG228300 Rh2BG240500 Rh2CG231700 Rh2DG236300
rosa_wichuraiana	Rw1G024190 Rw2G017620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1244
AccB7I	CCANNNNNTGG	1 cut(s)	226
AccI	GTMKAC	1 cut(s)	1117
AciI	CCGC	3 cut(s)	18, 99, 749
AclWI	GGATC	7 cut(s)	84, 224, 237, 375, 845, 944, 1375
AcoI	YGGCCR	3 cut(s)	100, 205, 561
AcsI	RAATTY	4 cut(s)	901, 983, 1104, 1497
AcyI	GRCGYC	1 cut(s)	276
AdeI	CACNNNGTG	1 cut(s)	1037
AfaI	GTAC	5 cut(s)	143, 732, 870, 919, 925
AfiI	CCNNNNNNNGG	4 cut(s)	226, 480, 1280, 1281
AgeI	ACCGGT	1 cut(s)	250
AgsI	TTSAA	8 cut(s)	460, 583, 755, 795, 877, 981, 1011, 1095
AjiI	CACGTC	1 cut(s)	106
AjnI	CCWGG	2 cut(s)	594, 1075
AjuI	GAANNNNNNNTTGG	3 cut(s)	37, 542, 574
AluBI	AGCT	8 cut(s)	118, 382, 455, 508, 571, 791, 840, 1531
AluI	AGCT	8 cut(s)	118, 382, 455, 508, 571, 791, 840, 1531
Alw21I	GWGCWC	1 cut(s)	120
Alw26I	GTCTC	5 cut(s)	73, 365, 1066, 1185, 1228
AlwI	GGATC	7 cut(s)	84, 224, 237, 375, 845, 944, 1375
AlwNI	CAGNNNCTG	1 cut(s)	1082
Ama87I	CYCGRG	1 cut(s)	804
AoxI	GGCC	3 cut(s)	100, 205, 561
ApeKI	GCWGC	5 cut(s)	127, 186, 575, 1082, 1187
ApoI	RAATTY	4 cut(s)	901, 983, 1104, 1497
AsiGI	ACCGGT	1 cut(s)	250
AspLEI	GCGC	1 cut(s)	291
AspS9I	GGNCC	3 cut(s)	343, 598, 1507
AsuC2I	CCSGG	1 cut(s)	170
AsuHPI	GGTGA	2 cut(s)	364, 1492
AvaI	CYCGRG	1 cut(s)	804
AvaII	GGWCC	3 cut(s)	343, 598, 1507
BalI	TGGCCA	1 cut(s)	563
BamHI	GGATCC	1 cut(s)	229
BanII	GRGCYC	2 cut(s)	120, 1148
BauI	CACGAG	1 cut(s)	113
BbsI	GAAGAC	2 cut(s)	60, 100
Bbv12I	GWGCWC	1 cut(s)	120
BbvI	GCAGC	5 cut(s)	139, 173, 587, 1069, 1174
BccI	CCATC	7 cut(s)	41, 50, 95, 101, 908, 1265, 1313
BceAI	ACGGC	3 cut(s)	633, 1400, 1407
BciT130I	CCWGG	2 cut(s)	596, 1077
BcnI	CCSGG	1 cut(s)	170
BcoDI	GTCTC	5 cut(s)	73, 365, 1066, 1185, 1228
BfaI	CTAG	7 cut(s)	621, 678, 689, 909, 996, 1050, 1062
BfmI	CTRYAG	2 cut(s)	1114, 1546
BglII	AGATCT	3 cut(s)	652, 1457, 1588
BisI	GCNGC	6 cut(s)	100, 128, 187, 576, 1083, 1188
BlsI	GCNGC	6 cut(s)	101, 129, 188, 577, 1084, 1189
BmcAI	AGTACT	1 cut(s)	143
Bme1390I	CCNGG	3 cut(s)	170, 596, 1077
Bme18I	GGWCC	3 cut(s)	343, 598, 1507
BmeT110I	CYCGRG	1 cut(s)	804
BmgBI	CACGTC	1 cut(s)	106
BmgT120I	GGNCC	3 cut(s)	343, 598, 1507
BmiI	GGNNCC	2 cut(s)	231, 1508
BmrFI	CCNGG	3 cut(s)	170, 596, 1077
BmrI	ACTGGG	1 cut(s)	1223
BmsI	GCATC	9 cut(s)	190, 421, 428, 449, 474, 479, 886, 964, 1507
BmuI	ACTGGG	1 cut(s)	1223
BoxI	GACNNNNGTC	1 cut(s)	1548
BpiI	GAAGAC	2 cut(s)	60, 100
BplI	GAGNNNNNCTC	2 cut(s)	226, 258
BpuEI	CTTGAG	2 cut(s)	347, 553
BpuMI	CCSGG	1 cut(s)	170
BsaHI	GRCGYC	1 cut(s)	276
BsaI	GGTCTC	1 cut(s)	1066
BsaJI	CCNNGG	6 cut(s)	72, 279, 474, 564, 1076, 1554
BsaWI	WCCGGW	1 cut(s)	250
Bsc4I	CCNNNNNNNGG	4 cut(s)	226, 480, 1280, 1281
Bse118I	RCCGGY	4 cut(s)	203, 207, 250, 345
Bse1I	ACTGG	4 cut(s)	220, 927, 1159, 1229
Bse3DI	GCAATG	1 cut(s)	284
BseBI	CCWGG	2 cut(s)	596, 1077
BseDI	CCNNGG	6 cut(s)	72, 279, 474, 564, 1076, 1554
BseGI	GGATG	3 cut(s)	470, 489, 901
BseLI	CCNNNNNNNGG	4 cut(s)	226, 480, 1280, 1281
BseMI	GCAATG	1 cut(s)	284
BseMII	CTCAG	2 cut(s)	257, 1445
BseNI	ACTGG	4 cut(s)	220, 927, 1159, 1229
BseRI	GAGGAG	2 cut(s)	281, 284
BseX3I	CGGCCG	1 cut(s)	205
BseXI	GCAGC	5 cut(s)	139, 173, 587, 1069, 1174
BsgI	GTGCAG	1 cut(s)	320
Bsh1285I	CGRYCG	2 cut(s)	208, 251
BshFI	GGCC	3 cut(s)	102, 207, 563
BshTI	ACCGGT	1 cut(s)	250
BsiEI	CGRYCG	2 cut(s)	208, 251
BsiHKAI	GWGCWC	1 cut(s)	120
BsiHKCI	CYCGRG	1 cut(s)	804
BsiSI	CCGG	5 cut(s)	170, 204, 208, 251, 346
BslFI	GGGAC	2 cut(s)	1520, 1536
BslI	CCNNNNNNNGG	4 cut(s)	226, 480, 1280, 1281
BsmAI	GTCTC	5 cut(s)	73, 365, 1066, 1185, 1228
BsmBI	CGTCTC	1 cut(s)	73
BsmFI	GGGAC	2 cut(s)	1520, 1536
BsmI	GAATGC	1 cut(s)	578
BsnI	GGCC	3 cut(s)	102, 207, 563
Bso31I	GGTCTC	1 cut(s)	1066
BsoBI	CYCGRG	1 cut(s)	804
Bsp1286I	GDGCHC	2 cut(s)	120, 1148
Bsp143I	GATC	9 cut(s)	76, 229, 367, 652, 850, 949, 1367, 1457, 1588
Bsp19I	CCATGG	1 cut(s)	474
BspACI	CCGC	3 cut(s)	18, 99, 749
BspANI	GGCC	3 cut(s)	102, 207, 563
BspCNI	CTCAG	2 cut(s)	256, 1446
BspLI	GGNNCC	2 cut(s)	231, 1508
BspMAI	CTGCAG	1 cut(s)	1550
BspPI	GGATC	7 cut(s)	84, 224, 237, 375, 845, 944, 1375
BspQI	GCTCTTC	1 cut(s)	1300
BspTNI	GGTCTC	1 cut(s)	1066
BsrDI	GCAATG	1 cut(s)	284
BsrFI	RCCGGY	4 cut(s)	203, 207, 250, 345
BsrI	ACTGG	4 cut(s)	220, 927, 1159, 1229
BssAI	RCCGGY	4 cut(s)	203, 207, 250, 345
BssECI	CCNNGG	6 cut(s)	72, 279, 474, 564, 1076, 1554
BssMI	GATC	9 cut(s)	76, 229, 367, 652, 850, 949, 1367, 1457, 1588
BssNI	GRCGYC	1 cut(s)	276
BssSI	CACGAG	1 cut(s)	113
BssT1I	CCWWGG	3 cut(s)	474, 564, 1554
Bst2BI	CACGAG	1 cut(s)	113
Bst2UI	CCWGG	2 cut(s)	596, 1077
Bst4CI	ACNGT	2 cut(s)	858, 868
Bst6I	CTCTTC	2 cut(s)	1300, 1426
BstACI	GRCGYC	1 cut(s)	276
BstDEI	CTNAG	4 cut(s)	243, 1121, 1454, 1532
BstDSI	CCRYGG	1 cut(s)	474
BstF5I	GGATG	3 cut(s)	470, 489, 901
BstHHI	GCGC	1 cut(s)	291
BstKTI	GATC	9 cut(s)	79, 232, 370, 655, 853, 952, 1370, 1460, 1591
BstMAI	GTCTC	5 cut(s)	73, 365, 1066, 1185, 1228
BstMBI	GATC	9 cut(s)	76, 229, 367, 652, 850, 949, 1367, 1457, 1588
BstMCI	CGRYCG	2 cut(s)	208, 251
BstMWI	GCNNNNNNNGC	8 cut(s)	45, 124, 174, 183, 195, 200, 204, 788
BstNI	CCWGG	2 cut(s)	596, 1077
BstPAI	GACNNNNGTC	1 cut(s)	1548
BstSCI	CCNGG	3 cut(s)	168, 594, 1075
BstSFI	CTRYAG	2 cut(s)	1114, 1546
BstV1I	GCAGC	5 cut(s)	139, 173, 587, 1069, 1174
BstV2I	GAAGAC	2 cut(s)	60, 100
BstX2I	RGATCY	8 cut(s)	76, 229, 367, 652, 949, 1367, 1457, 1588
BstYI	RGATCY	8 cut(s)	76, 229, 367, 652, 949, 1367, 1457, 1588
BstZI	CGGCCG	1 cut(s)	205
BsuRI	GGCC	3 cut(s)	102, 207, 563
BtgI	CCRYGG	1 cut(s)	474
BtgZI	GCGATG	1 cut(s)	213
BtrI	CACGTC	1 cut(s)	106
BtsCI	GGATG	3 cut(s)	470, 489, 901
BtsI	GCAGTG	2 cut(s)	137, 441
BtsIMutI	CAGTG	5 cut(s)	137, 441, 854, 934, 1236
CaiI	CAGNNNCTG	1 cut(s)	1082
CfoI	GCGC	1 cut(s)	291
Cfr10I	RCCGGY	4 cut(s)	203, 207, 250, 345
Cfr13I	GGNCC	3 cut(s)	343, 598, 1507
CseI	GACGC	1 cut(s)	284
CsiI	ACCWGGT	1 cut(s)	594
Csp6I	GTAC	5 cut(s)	142, 731, 869, 918, 924
CspAI	ACCGGT	1 cut(s)	250
CviAII	CATG	4 cut(s)	475, 602, 662, 1001
CviQI	GTAC	5 cut(s)	142, 731, 869, 918, 924
DdeI	CTNAG	4 cut(s)	243, 1121, 1454, 1532
DpnI	GATC	9 cut(s)	78, 231, 369, 654, 852, 951, 1369, 1459, 1590
DpnII	GATC	9 cut(s)	76, 229, 367, 652, 850, 949, 1367, 1457, 1588
DraI	TTTAAA	1 cut(s)	786
DraIII	CACNNNGTG	1 cut(s)	1037
EaeI	YGGCCR	3 cut(s)	100, 205, 561
EagI	CGGCCG	1 cut(s)	205
Eam1104I	CTCTTC	2 cut(s)	1300, 1426
EarI	CTCTTC	2 cut(s)	1300, 1426
Ecl136II	GAGCTC	1 cut(s)	118
EclXI	CGGCCG	1 cut(s)	205
Eco130I	CCWWGG	3 cut(s)	474, 564, 1554
Eco24I	GRGCYC	2 cut(s)	120, 1148
Eco31I	GGTCTC	1 cut(s)	1066
Eco47I	GGWCC	3 cut(s)	343, 598, 1507
Eco52I	CGGCCG	1 cut(s)	205
Eco53kI	GAGCTC	1 cut(s)	118
Eco88I	CYCGRG	1 cut(s)	804
EcoICRI	GAGCTC	1 cut(s)	118
EcoRII	CCWGG	2 cut(s)	594, 1075
EcoT14I	CCWWGG	3 cut(s)	474, 564, 1554
EcoT38I	GRGCYC	2 cut(s)	120, 1148
ErhI	CCWWGG	3 cut(s)	474, 564, 1554
Esp3I	CGTCTC	1 cut(s)	73
FaeI	CATG	4 cut(s)	478, 605, 665, 1004
FaqI	GGGAC	2 cut(s)	1520, 1536
FatI	CATG	4 cut(s)	474, 601, 661, 1000
FblI	GTMKAC	1 cut(s)	1117
Fnu4HI	GCNGC	6 cut(s)	100, 128, 187, 576, 1083, 1188
FokI	GGATG	3 cut(s)	457, 496, 908
FriOI	GRGCYC	2 cut(s)	120, 1148
Fsp4HI	GCNGC	6 cut(s)	100, 128, 187, 576, 1083, 1188
FspBI	CTAG	7 cut(s)	621, 678, 689, 909, 996, 1050, 1062
GlaI	GCGC	1 cut(s)	290
GluI	GCNGC	6 cut(s)	100, 128, 187, 576, 1083, 1188
HaeIII	GGCC	3 cut(s)	102, 207, 563
HapII	CCGG	5 cut(s)	170, 204, 208, 251, 346
HgaI	GACGC	1 cut(s)	284
HhaI	GCGC	1 cut(s)	291
Hin1I	GRCGYC	1 cut(s)	276
Hin1II	CATG	4 cut(s)	478, 605, 665, 1004
Hin6I	GCGC	1 cut(s)	289
HinP1I	GCGC	1 cut(s)	289
HindIII	AAGCTT	3 cut(s)	453, 789, 838
HinfI	GANTC	8 cut(s)	311, 358, 1091, 1165, 1201, 1250, 1385, 1443
HpaII	CCGG	5 cut(s)	170, 204, 208, 251, 346
HphI	GGTGA	2 cut(s)	364, 1492
Hpy166II	GTNNAC	4 cut(s)	592, 871, 1118, 1360
Hpy188I	TCNGA	6 cut(s)	73, 234, 824, 1090, 1455, 1585
Hpy188III	TCNNGA	3 cut(s)	1130, 1205, 1316
Hpy8I	GTNNAC	4 cut(s)	592, 871, 1118, 1360
Hpy99I	CGWCG	1 cut(s)	151
HpyAV	CCTTC	3 cut(s)	31, 688, 938
HpyCH4III	ACNGT	2 cut(s)	858, 868
HpyCH4IV	ACGT	1 cut(s)	105
HpyF10VI	GCNNNNNNNGC	8 cut(s)	45, 124, 174, 183, 195, 200, 204, 788
HpyF3I	CTNAG	4 cut(s)	243, 1121, 1454, 1532
HpySE526I	ACGT	1 cut(s)	105
Hsp92I	GRCGYC	1 cut(s)	276
Hsp92II	CATG	4 cut(s)	478, 605, 665, 1004
HspAI	GCGC	1 cut(s)	289
KroI	GCCGGC	2 cut(s)	203, 207
KroNI	GCCGGC	2 cut(s)	205, 209
Kzo9I	GATC	9 cut(s)	76, 229, 367, 652, 850, 949, 1367, 1457, 1588
LguI	GCTCTTC	1 cut(s)	1300
LmnI	GCTCC	6 cut(s)	44, 397, 505, 568, 1322, 1528
Lsp1109I	GCAGC	5 cut(s)	139, 173, 587, 1069, 1174
LweI	GCATC	9 cut(s)	190, 421, 428, 449, 474, 479, 886, 964, 1507
MabI	ACCWGGT	1 cut(s)	594
MaeI	CTAG	7 cut(s)	621, 678, 689, 909, 996, 1050, 1062
MaeII	ACGT	1 cut(s)	105
MaeIII	GTNAC	2 cut(s)	517, 1372
MalI	GATC	9 cut(s)	78, 231, 369, 654, 852, 951, 1369, 1459, 1590
MboI	GATC	9 cut(s)	76, 229, 367, 652, 850, 949, 1367, 1457, 1588
MflI	RGATCY	8 cut(s)	76, 229, 367, 652, 949, 1367, 1457, 1588
MhlI	GDGCHC	2 cut(s)	120, 1148
MlsI	TGGCCA	1 cut(s)	563
MluNI	TGGCCA	1 cut(s)	563
MlyI	GAGTC	4 cut(s)	320, 367, 1159, 1379
MmeI	TCCRAC	2 cut(s)	36, 288
Mox20I	TGGCCA	1 cut(s)	563
MroNI	GCCGGC	2 cut(s)	203, 207
MscI	TGGCCA	1 cut(s)	563
MseI	TTAA	4 cut(s)	719, 785, 962, 1236
Msp20I	TGGCCA	1 cut(s)	563
MspI	CCGG	5 cut(s)	170, 204, 208, 251, 346
MspR9I	CCNGG	3 cut(s)	170, 596, 1077
Mva1269I	GAATGC	1 cut(s)	578
MvaI	CCWGG	2 cut(s)	596, 1077
MwoI	GCNNNNNNNGC	8 cut(s)	45, 124, 174, 183, 195, 200, 204, 788
NaeI	GCCGGC	2 cut(s)	205, 209
NciI	CCSGG	1 cut(s)	170
NcoI	CCATGG	1 cut(s)	474
NdeII	GATC	9 cut(s)	76, 229, 367, 652, 850, 949, 1367, 1457, 1588
NgoMIV	GCCGGC	2 cut(s)	203, 207
NlaIII	CATG	4 cut(s)	478, 605, 665, 1004
NlaIV	GGNNCC	2 cut(s)	231, 1508
NmeAIII	GCCGAG	1 cut(s)	304
PaeR7I	CTCGAG	1 cut(s)	804
PciSI	GCTCTTC	1 cut(s)	1300
PcsI	WCGNNNNNNNCGW	3 cut(s)	111, 230, 487
PctI	GAATGC	1 cut(s)	578
PdiI	GCCGGC	2 cut(s)	205, 209
PfeI	GAWTC	4 cut(s)	1091, 1201, 1250, 1443
PflMI	CCANNNNNTGG	1 cut(s)	226
PinAI	ACCGGT	1 cut(s)	250
PkrI	GCNGC	6 cut(s)	101, 129, 188, 577, 1084, 1189
PleI	GAGTC	4 cut(s)	319, 366, 1159, 1379
PpsI	GAGTC	4 cut(s)	319, 366, 1159, 1379
PshAI	GACNNNNGTC	1 cut(s)	1548
PsiI	TTATAA	1 cut(s)	1244
Psp124BI	GAGCTC	1 cut(s)	120
Psp6I	CCWGG	2 cut(s)	594, 1075
PspGI	CCWGG	2 cut(s)	594, 1075
PspN4I	GGNNCC	2 cut(s)	231, 1508
PspPI	GGNCC	3 cut(s)	343, 598, 1507
PspXI	VCTCGAGB	1 cut(s)	804
PstI	CTGCAG	1 cut(s)	1550
PstNI	CAGNNNCTG	1 cut(s)	1082
PsuI	RGATCY	8 cut(s)	76, 229, 367, 652, 949, 1367, 1457, 1588
RsaI	GTAC	5 cut(s)	143, 732, 870, 919, 925
RsaNI	GTAC	5 cut(s)	142, 731, 869, 918, 924
SacI	GAGCTC	1 cut(s)	120
SapI	GCTCTTC	1 cut(s)	1300
SaqAI	TTAA	4 cut(s)	719, 785, 962, 1236
SatI	GCNGC	6 cut(s)	100, 128, 187, 576, 1083, 1188
Sau3AI	GATC	9 cut(s)	76, 229, 367, 652, 850, 949, 1367, 1457, 1588
Sau96I	GGNCC	3 cut(s)	343, 598, 1507
ScaI	AGTACT	1 cut(s)	143
SchI	GAGTC	4 cut(s)	320, 367, 1159, 1379
ScrFI	CCNGG	3 cut(s)	170, 596, 1077
SduI	GDGCHC	2 cut(s)	120, 1148
SexAI	ACCWGGT	1 cut(s)	594
SfaNI	GCATC	9 cut(s)	190, 421, 428, 449, 474, 479, 886, 964, 1507
SfcI	CTRYAG	2 cut(s)	1114, 1546
Sfr274I	CTCGAG	1 cut(s)	804
SinI	GGWCC	3 cut(s)	343, 598, 1507
SlaI	CTCGAG	1 cut(s)	804
SmlI	CTYRAG	3 cut(s)	362, 532, 804
SmoI	CTYRAG	3 cut(s)	362, 532, 804
SsiI	CCGC	3 cut(s)	18, 99, 749
SspMI	CTAG	7 cut(s)	621, 678, 689, 909, 996, 1050, 1062
SstI	GAGCTC	1 cut(s)	120
StyD4I	CCNGG	3 cut(s)	168, 594, 1075
StyI	CCWWGG	3 cut(s)	474, 564, 1554
TaaI	ACNGT	2 cut(s)	858, 868
TaiI	ACGT	1 cut(s)	108
TaqI	TCGA	3 cut(s)	138, 149, 805
TatI	WGTACW	2 cut(s)	141, 868
TauI	GCSGC	1 cut(s)	102
TfiI	GAWTC	4 cut(s)	1091, 1201, 1250, 1443
Tru1I	TTAA	4 cut(s)	719, 785, 962, 1236
Tru9I	TTAA	4 cut(s)	719, 785, 962, 1236
TscAI	CASTG	5 cut(s)	137, 441, 861, 934, 1236
TseI	GCWGC	5 cut(s)	127, 186, 575, 1082, 1187
TspGWI	ACGGA	2 cut(s)	496, 1443
TspRI	CASTG	5 cut(s)	137, 441, 861, 934, 1236
Van91I	CCANNNNNTGG	1 cut(s)	226
VpaK11BI	GGWCC	3 cut(s)	343, 598, 1507
XapI	RAATTY	4 cut(s)	901, 983, 1104, 1497
XhoI	CTCGAG	1 cut(s)	804
XmiI	GTMKAC	1 cut(s)	1117
XspI	CTAG	7 cut(s)	621, 678, 689, 909, 996, 1050, 1062
ZrmI	AGTACT	1 cut(s)	143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.