RchiOBHm_Chr1g0381771

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0006138
Physical Location & Seq
Forward (+)
66976029 .. 66980944
4916 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60484

Sequence Viewer

Length: 1812 bp
ATGATGAGCTCTTTGAGATGCATTGCAAAACACCCAACAATTGCACTAGTAGACTCATCCACCACTCTCATAGATCTCAAGCAAATCCATACCCAACTCCTCATTAACGGCGTTCTCAACGATCCTCACCTCTCCGGCAACTTTGTTGCCACCATTGCTGTTCGGAACCCCAACAATTTGGAATATTCCAACCGAGTCCTGGACCAATGTGACAACCCATCTCTCTTTGCCTTCAACTCCATGATCAGGGCCTATTCCAAAAGCTCCACACCCAGTAAAAGCTTTCACTTTTACAGCAGAATCCTTCATTCACGTAACAATCTTCTACCTGATAACTACACATTTAACTTCTTGGTTCGCACTTCTGCGCAGCTTTCGTCATTTGAGACTGGTCCTTCGGTCCATGGTGCATTAGTAAAGCATGGATTTGAGAATGACCCGCATGTTCAAAGTGCTTTAATATTTATGTATGCGGAATTGGGTTGCTTGGAGCAATGTCATAGAGTGTTTAGCGGCATTGCCGATCCTGATTTGGTGTGTCAGACTGCTATTGTGAGCGCTTGTGCTAAATGTGGGGATGTAGATTATGCACGGTTATTGTTCAATGAAATGCCTGAGAGAGACCCCATTGCTTGGAATGCGATGATTGCGGGGTATGCGCAATGTGGGAAGTCTAGGGAAGCTTTGGGTTTGTTCCATTTGATGCAAATGGAGGGTGTGAGGGTGAATGAGGTGTGTATGGTTTCGGTGTTATCGGCGTGTTGTCACTTGGGGGCACTGGATCAAGGGAGATGGGCTCATGCATATATAGAGAGAAACAAGGTAAGGATGACAGTGACATTGGGGACTACACTGCTTGACATGTATGCGAAATGTGGGAACATGAGTAAGGCTATGGAATGTTGCCTTGGGGGACTAGCTATGAATGGCTTTGGTGAGAAGTGCCTTGAGCTTTTCTCAATCATGGAGGAAGAAGGCGTTCGGCCAAATGAAGTTACCTTTGTTTCGGTTCTTAGGGGTTGTACTGTGGTTGGACTAGTGGAGGAAGGTCGTCGACATTTTGACTCGATGAAAGAATTGTTTGGGATTGAACCTCAGCTAGAGCATTATGGGTGCATTGTTGACTTATATGGTCGAGCTGGGCGTTTAGATGAAGCCCTGAACTTCATTAACAACATGCCAATGAAGCCTCATGCGGGTGCTTGGGGGGCTTTGCTCCACGCTAGTAGAATGTATCGGAATATGGAACTGGGTGAGCTTGCGTCAAGAAAGATAGTAGAACTCGAGGACCGGAATCACGGTGCTTATGTGCTTTTGTCCAATATATATGCGGATTCCAAGCTTTATGATGGAGTTAGTAATGTGCGGCAAAATATGAAGGCTAAAGGTGTGAGGAAGCTTCCTGGTTGTAGTGTCATAGAAGTTGATGGGGAAGTTCATGAATTCTTTGCAGGGGAAGACAATTCTCATCCAAGGTATAATGAAATCGAAATGATGCTGGAAGAAATCTCCCGGCGCCTGAAATTAGCAGGTTATGTTGCCAATACCAACCCTGTGCTGTTCGATATAGAAGAAGAAGAGAAAGAGGATGCATTGTTTAAACACAGCGAGAAGTTTGCCATTGCTTTTGGTTTGATCGGTTTGAGAGAAGGAGTGCCCATTAGGATTGCAAAGAACCTCAGGGTCTGTTGGGATTGTCATGATGTAACAAAAATGATATCCAAGATTTTCAATAGAGTGATTATAGTAAGAGACAGAAATAGGTTTCACCATTTTCAAAATGGTGAGTGCTCTTGTAAGGATTATTGGTGA

Protein Analysis

603

Amino Acids

67.83

Weight (kDa)

6.23

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 208 - 256 1.7e-09 PPR repeat family
PPR PF01535 211 - 240 5.2e-08 PPR repeat
PPR_2 PF13041 301 - 341 4.3e-06 PPR repeat family
E_motif PF20431 412 - 474 1.3e-19 E motif
DYW_deaminase PF14432 511 - 603 8.1e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 369, 660
Acc36I ACCTGC 1 cut(s) 1520
AccB1I GGYRCC 1 cut(s) 1515
AccB7I CCANNNNNTGG 1 cut(s) 633
AccI GTMKAC 2 cut(s) 51, 1054
AciI CCGC 7 cut(s) 440, 473, 513, 650, 1196, 1331, 1366
AclWI GGATC 3 cut(s) 116, 518, 789
AcoI YGGCCR 1 cut(s) 983
AcsI RAATTY 1 cut(s) 1442
AcyI GRCGYC 1 cut(s) 1516
AfaI GTAC 1 cut(s) 1024
AfeI AGCGCT 1 cut(s) 559
AfiI CCNNNNNNNGG 4 cut(s) 199, 246, 633, 1196
AflIII ACRYGT 1 cut(s) 861
AgsI TTSAA 6 cut(s) 235, 449, 604, 1091, 1732, 1778
AhlI ACTAGT 2 cut(s) 46, 1036
AjnI CCWGG 2 cut(s) 198, 1402
AjuI GAANNNNNNNTTGG 2 cut(s) 891, 923
Alw21I GWGCWC 2 cut(s) 11, 1793
Alw26I GTCTC 3 cut(s) 380, 615, 1746
AlwI GGATC 3 cut(s) 116, 518, 789
AlwNI CAGNNNCTG 1 cut(s) 1686
Ama87I CYCGRG 1 cut(s) 1283
Aor51HI AGCGCT 1 cut(s) 559
AoxI GGCC 2 cut(s) 249, 983
ApeKI GCWGC 1 cut(s) 370
ApoI RAATTY 1 cut(s) 1442
ArsI GACNNNNNNTTYG 2 cut(s) 379, 411
Asp700I GAANNNNTTC 1 cut(s) 978
AspLEI GCGC 4 cut(s) 370, 560, 661, 1518
AspS9I GGNCC 5 cut(s) 202, 249, 392, 400, 1288
AsuC2I CCSGG 1 cut(s) 1513
AsuHPI GGTGA 6 cut(s) 119, 736, 947, 1265, 1760, 1796
AvaI CYCGRG 1 cut(s) 1283
AvaII GGWCC 4 cut(s) 202, 392, 400, 1288
AxyI CCTNAGG 1 cut(s) 1679
BaeGI GKGCMC 2 cut(s) 778, 1659
BanI GGYRCC 1 cut(s) 1515
BanII GRGCYC 2 cut(s) 11, 799
BbsI GAAGAC 1 cut(s) 1464
Bbv12I GWGCWC 2 cut(s) 11, 1793
BbvCI CCTCAGC 1 cut(s) 1095
BbvI GCAGC 1 cut(s) 382
BccI CCATC 4 cut(s) 226, 786, 1343, 1421
BceAI ACGGC 1 cut(s) 124
BcgI CGANNNNNNTGC 2 cut(s) 1598, 1632
BciT130I CCWGG 2 cut(s) 200, 1404
BclI TGATCA 1 cut(s) 243
BcnI CCSGG 1 cut(s) 1513
BcoDI GTCTC 3 cut(s) 380, 615, 1746
BcuI ACTAGT 2 cut(s) 46, 1036
BfaI CTAG 6 cut(s) 47, 675, 917, 1037, 1100, 1224
BfoI RGCGCY 2 cut(s) 561, 1519
BfuAI ACCTGC 1 cut(s) 1520
BglII AGATCT 1 cut(s) 73
BisI GCNGC 3 cut(s) 371, 514, 1367
BlsI GCNGC 3 cut(s) 372, 515, 1368
Bme1390I CCNGG 3 cut(s) 200, 1404, 1513
Bme18I GGWCC 4 cut(s) 202, 392, 400, 1288
BmeT110I CYCGRG 1 cut(s) 1283
BmgT120I GGNCC 5 cut(s) 202, 249, 392, 400, 1288
BmiI GGNNCC 2 cut(s) 167, 1517
BmrFI CCNGG 3 cut(s) 200, 1404, 1513
BmrI ACTGGG 2 cut(s) 267, 1259
BmsI GCATC 4 cut(s) 8, 693, 1485, 1579
BmuI ACTGGG 2 cut(s) 267, 1259
BpiI GAAGAC 1 cut(s) 1464
BplI GAGNNNNNCTC 4 cut(s) 781, 813, 941, 973
Bpu10I CCTNAGC 1 cut(s) 1095
BpuEI CTTGAG 2 cut(s) 62, 968
BpuMI CCSGG 1 cut(s) 1513
BsaAI YACGTR 1 cut(s) 314
BsaHI GRCGYC 1 cut(s) 1516
BsaI GGTCTC 1 cut(s) 615
BsaJI CCNNGG 3 cut(s) 403, 907, 1472
BsaWI WCCGGW 1 cut(s) 1290
Bsc4I CCNNNNNNNGG 4 cut(s) 199, 246, 633, 1196
Bse1I ACTGG 4 cut(s) 273, 394, 783, 1254
Bse21I CCTNAGG 1 cut(s) 1679
Bse3DI GCAATG 7 cut(s) 21, 153, 500, 516, 627, 668, 1620
BseBI CCWGG 2 cut(s) 200, 1404
BseDI CCNNGG 3 cut(s) 403, 907, 1472
BseGI GGATG 5 cut(s) 56, 583, 834, 1468, 1594
BseLI CCNNNNNNNGG 4 cut(s) 199, 246, 633, 1196
BseMI GCAATG 7 cut(s) 21, 153, 500, 516, 627, 668, 1620
BseMII CTCAG 3 cut(s) 606, 1109, 1693
BseNI ACTGG 4 cut(s) 273, 394, 783, 1254
BseRI GAGGAG 1 cut(s) 89
BseSI GKGCMC 2 cut(s) 778, 1659
BseXI GCAGC 1 cut(s) 382
BseYI CCCAGC 1 cut(s) 1139
BshFI GGCC 2 cut(s) 251, 985
BshNI GGYRCC 1 cut(s) 1515
BsiHKAI GWGCWC 2 cut(s) 11, 1793
BsiHKCI CYCGRG 1 cut(s) 1283
BsiSI CCGG 3 cut(s) 135, 1291, 1513
BslFI GGGAC 2 cut(s) 859, 927
BslI CCNNNNNNNGG 4 cut(s) 199, 246, 633, 1196
BsmAI GTCTC 3 cut(s) 380, 615, 1746
BsmFI GGGAC 2 cut(s) 859, 927
BsmI GAATGC 1 cut(s) 643
BsnI GGCC 2 cut(s) 251, 985
Bso31I GGTCTC 1 cut(s) 615
BsoBI CYCGRG 1 cut(s) 1283
Bsp1286I GDGCHC 5 cut(s) 11, 778, 799, 1659, 1793
Bsp143I GATC 6 cut(s) 73, 121, 243, 523, 781, 1635
Bsp19I CCATGG 1 cut(s) 403
BspACI CCGC 7 cut(s) 440, 473, 513, 650, 1196, 1331, 1366
BspANI GGCC 2 cut(s) 251, 985
BspCNI CTCAG 3 cut(s) 607, 1108, 1692
BspHI TCATGA 2 cut(s) 1438, 1699
BspLI GGNNCC 2 cut(s) 167, 1517
BspMI ACCTGC 1 cut(s) 1520
BspPI GGATC 3 cut(s) 116, 518, 789
BspT107I GGYRCC 1 cut(s) 1515
BspTNI GGTCTC 1 cut(s) 615
BsrDI GCAATG 7 cut(s) 21, 153, 500, 516, 627, 668, 1620
BsrI ACTGG 4 cut(s) 273, 394, 783, 1254
BssECI CCNNGG 3 cut(s) 403, 907, 1472
BssMI GATC 6 cut(s) 73, 121, 243, 523, 781, 1635
BssNI GRCGYC 1 cut(s) 1516
BssT1I CCWWGG 3 cut(s) 403, 907, 1472
Bst2UI CCWGG 2 cut(s) 200, 1404
Bst4CI ACNGT 4 cut(s) 594, 835, 1027, 1301
Bst6I CTCTTC 1 cut(s) 1572
BstACI GRCGYC 1 cut(s) 1516
BstBAI YACGTR 1 cut(s) 314
BstC8I GCNNGC 1 cut(s) 1260
BstDEI CTNAG 4 cut(s) 615, 1013, 1095, 1679
BstDSI CCRYGG 1 cut(s) 403
BstF5I GGATG 5 cut(s) 56, 583, 834, 1468, 1594
BstH2I RGCGCY 2 cut(s) 561, 1519
BstHHI GCGC 4 cut(s) 370, 560, 661, 1518
BstKTI GATC 6 cut(s) 76, 124, 246, 526, 784, 1638
BstMAI GTCTC 3 cut(s) 380, 615, 1746
BstMBI GATC 6 cut(s) 73, 121, 243, 523, 781, 1635
BstMWI GCNNNNNNNGC 6 cut(s) 155, 638, 647, 656, 1186, 1208
BstNI CCWGG 2 cut(s) 200, 1404
BstNSI RCATGY 3 cut(s) 446, 865, 1180
BstSCI CCNGG 3 cut(s) 198, 1402, 1511
BstSLI GKGCMC 2 cut(s) 778, 1659
BstV1I GCAGC 1 cut(s) 382
BstV2I GAAGAC 1 cut(s) 1464
BstX2I RGATCY 1 cut(s) 73
BstXI CCANNNNNNTGG 1 cut(s) 178
BstYI RGATCY 1 cut(s) 73
Bsu36I CCTNAGG 1 cut(s) 1679
BsuRI GGCC 2 cut(s) 251, 985
BtgI CCRYGG 1 cut(s) 403
BtgZI GCGATG 1 cut(s) 656
BtsCI GGATG 5 cut(s) 56, 583, 834, 1468, 1594
BtsI GCAGTG 1 cut(s) 851
BtsIMutI CAGTG 3 cut(s) 776, 840, 851
BveI ACCTGC 1 cut(s) 1520
Cac8I GCNNGC 1 cut(s) 1260
CaiI CAGNNNCTG 1 cut(s) 1686
CciI TCATGA 2 cut(s) 1438, 1699
CfoI GCGC 4 cut(s) 370, 560, 661, 1518
Cfr13I GGNCC 5 cut(s) 202, 249, 392, 400, 1288
CseI GACGC 1 cut(s) 1251
Csp6I GTAC 1 cut(s) 1023
CviQI GTAC 1 cut(s) 1023
DdeI CTNAG 4 cut(s) 615, 1013, 1095, 1679
DinI GGCGCC 1 cut(s) 1517
DpnI GATC 6 cut(s) 75, 123, 245, 525, 783, 1637
DpnII GATC 6 cut(s) 73, 121, 243, 523, 781, 1635
DraI TTTAAA 1 cut(s) 1600
EaeI YGGCCR 1 cut(s) 983
Eam1104I CTCTTC 1 cut(s) 1572
EarI CTCTTC 1 cut(s) 1572
Ecl136II GAGCTC 1 cut(s) 9
Eco130I CCWWGG 3 cut(s) 403, 907, 1472
Eco24I GRGCYC 2 cut(s) 11, 799
Eco31I GGTCTC 1 cut(s) 615
Eco32I GATATC 1 cut(s) 1719
Eco47I GGWCC 4 cut(s) 202, 392, 400, 1288
Eco47III AGCGCT 1 cut(s) 559
Eco53kI GAGCTC 1 cut(s) 9
Eco81I CCTNAGG 1 cut(s) 1679
Eco88I CYCGRG 1 cut(s) 1283
EcoICRI GAGCTC 1 cut(s) 9
EcoO109I RGGNCCY 1 cut(s) 249
EcoRI GAATTC 1 cut(s) 1442
EcoRII CCWGG 2 cut(s) 198, 1402
EcoRV GATATC 1 cut(s) 1719
EcoT14I CCWWGG 3 cut(s) 403, 907, 1472
EcoT22I ATGCAT 3 cut(s) 23, 805, 1594
EcoT38I GRGCYC 2 cut(s) 11, 799
EgeI GGCGCC 1 cut(s) 1517
EheI GGCGCC 1 cut(s) 1517
ErhI CCWWGG 3 cut(s) 403, 907, 1472
FaqI GGGAC 2 cut(s) 859, 927
FauI CCCGC 3 cut(s) 447, 643, 1189
FbaI TGATCA 1 cut(s) 243
FblI GTMKAC 2 cut(s) 51, 1054
Fnu4HI GCNGC 3 cut(s) 371, 514, 1367
FokI GGATG 5 cut(s) 43, 590, 841, 1455, 1601
FriOI GRGCYC 2 cut(s) 11, 799
Fsp4HI GCNGC 3 cut(s) 371, 514, 1367
FspBI CTAG 6 cut(s) 47, 675, 917, 1037, 1100, 1224
FspI TGCGCA 2 cut(s) 369, 660
GlaI GCGC 4 cut(s) 369, 559, 660, 1517
GluI GCNGC 3 cut(s) 371, 514, 1367
GsaI CCCAGC 1 cut(s) 1143
HaeII RGCGCY 2 cut(s) 561, 1519
HaeIII GGCC 2 cut(s) 251, 985
HapII CCGG 3 cut(s) 135, 1291, 1513
HgaI GACGC 1 cut(s) 1251
HhaI GCGC 4 cut(s) 370, 560, 661, 1518
Hin1I GRCGYC 1 cut(s) 1516
Hin6I GCGC 4 cut(s) 368, 558, 659, 1516
HinP1I GCGC 4 cut(s) 368, 558, 659, 1516
HincII GTYRAC 2 cut(s) 1055, 1123
HindII GTYRAC 2 cut(s) 1055, 1123
HindIII AAGCTT 4 cut(s) 280, 681, 1340, 1397
HinfI GANTC 6 cut(s) 53, 195, 300, 1064, 1294, 1334
HpaII CCGG 3 cut(s) 135, 1291, 1513
HphI GGTGA 6 cut(s) 119, 736, 947, 1265, 1760, 1796
Hpy166II GTNNAC 3 cut(s) 52, 1055, 1123
Hpy188I TCNGA 3 cut(s) 165, 543, 1239
Hpy188III TCNNGA 4 cut(s) 527, 1266, 1439, 1700
Hpy8I GTNNAC 3 cut(s) 52, 1055, 1123
Hpy99I CGWCG 1 cut(s) 1056
HpyAV CCTTC 7 cut(s) 241, 314, 405, 968, 1040, 1372, 1643
HpyCH4III ACNGT 4 cut(s) 594, 835, 1027, 1301
HpyCH4IV ACGT 1 cut(s) 313
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 638, 647, 656, 1186, 1208
HpyF3I CTNAG 4 cut(s) 615, 1013, 1095, 1679
HpySE526I ACGT 1 cut(s) 313
Hsp92I GRCGYC 1 cut(s) 1516
HspAI GCGC 4 cut(s) 368, 558, 659, 1516
KasI GGCGCC 1 cut(s) 1515
Ksp22I TGATCA 1 cut(s) 243
Kzo9I GATC 6 cut(s) 73, 121, 243, 523, 781, 1635
LmnI GCTCC 3 cut(s) 269, 490, 1221
Lsp1109I GCAGC 1 cut(s) 382
LweI GCATC 4 cut(s) 8, 693, 1485, 1579
MaeI CTAG 6 cut(s) 47, 675, 917, 1037, 1100, 1224
MaeII ACGT 1 cut(s) 313
MaeIII GTNAC 6 cut(s) 209, 314, 764, 835, 994, 1705
MalI GATC 6 cut(s) 75, 123, 245, 525, 783, 1637
MboI GATC 6 cut(s) 73, 121, 243, 523, 781, 1635
MboII GAAGA 7 cut(s) 314, 983, 1469, 1514, 1583, 1586, 1589
MfeI CAATTG 1 cut(s) 39
MflI RGATCY 1 cut(s) 73
MhlI GDGCHC 5 cut(s) 11, 778, 799, 1659, 1793
MluCI AATT 7 cut(s) 39, 175, 476, 1076, 1442, 1462, 1523
Mly113I GGCGCC 1 cut(s) 1516
MlyI GAGTC 3 cut(s) 47, 204, 1058
MmeI TCCRAC 2 cut(s) 213, 1012
Mph1103I ATGCAT 3 cut(s) 23, 805, 1594
MroXI GAANNNNTTC 1 cut(s) 978
MseI TTAA 5 cut(s) 105, 345, 458, 1170, 1599
MslI CAYNNNNRTG 2 cut(s) 1181, 1197
MspI CCGG 3 cut(s) 135, 1291, 1513
MspR9I CCNGG 3 cut(s) 200, 1404, 1513
MssI GTTTAAAC 1 cut(s) 1600
MunI CAATTG 1 cut(s) 39
Mva1269I GAATGC 1 cut(s) 643
MvaI CCWGG 2 cut(s) 200, 1404
MwoI GCNNNNNNNGC 6 cut(s) 155, 638, 647, 656, 1186, 1208
NarI GGCGCC 1 cut(s) 1516
NciI CCSGG 1 cut(s) 1513
NcoI CCATGG 1 cut(s) 403
NdeII GATC 6 cut(s) 73, 121, 243, 523, 781, 1635
NlaIV GGNNCC 2 cut(s) 167, 1517
NmuCI GTSAC 3 cut(s) 209, 764, 835
NsbI TGCGCA 2 cut(s) 369, 660
NsiI ATGCAT 3 cut(s) 23, 805, 1594
NspI RCATGY 3 cut(s) 446, 865, 1180
PaeR7I CTCGAG 1 cut(s) 1283
PagI TCATGA 2 cut(s) 1438, 1699
PciI ACATGT 1 cut(s) 861
PcsI WCGNNNNNNNCGW 1 cut(s) 1141
PctI GAATGC 1 cut(s) 643
PdmI GAANNNNTTC 1 cut(s) 978
PfeI GAWTC 3 cut(s) 300, 1294, 1334
PflMI CCANNNNNTGG 1 cut(s) 633
PfoI TCCNGGA 1 cut(s) 198
PkrI GCNGC 3 cut(s) 372, 515, 1368
PleI GAGTC 3 cut(s) 47, 203, 1058
PluTI GGCGCC 1 cut(s) 1519
PmeI GTTTAAAC 1 cut(s) 1600
PpsI GAGTC 3 cut(s) 47, 203, 1058
Ppu21I YACGTR 1 cut(s) 314
PscI ACATGT 1 cut(s) 861
Psp124BI GAGCTC 1 cut(s) 11
Psp6I CCWGG 2 cut(s) 198, 1402
PspFI CCCAGC 1 cut(s) 1139
PspGI CCWGG 2 cut(s) 198, 1402
PspN4I GGNNCC 2 cut(s) 167, 1517
PspPI GGNCC 5 cut(s) 202, 249, 392, 400, 1288
PspXI VCTCGAGB 1 cut(s) 1283
PstNI CAGNNNCTG 1 cut(s) 1686
PsuI RGATCY 1 cut(s) 73
RsaI GTAC 1 cut(s) 1024
RsaNI GTAC 1 cut(s) 1023
RseI CAYNNNNRTG 2 cut(s) 1181, 1197
SacI GAGCTC 1 cut(s) 11
SalI GTCGAC 1 cut(s) 1053
SaqAI TTAA 5 cut(s) 105, 345, 458, 1170, 1599
SatI GCNGC 3 cut(s) 371, 514, 1367
Sau3AI GATC 6 cut(s) 73, 121, 243, 523, 781, 1635
Sau96I GGNCC 5 cut(s) 202, 249, 392, 400, 1288
SchI GAGTC 3 cut(s) 47, 204, 1058
ScrFI CCNGG 3 cut(s) 200, 1404, 1513
SduI GDGCHC 5 cut(s) 11, 778, 799, 1659, 1793
SfaNI GCATC 4 cut(s) 8, 693, 1485, 1579
SfoI GGCGCC 1 cut(s) 1517
Sfr274I CTCGAG 1 cut(s) 1283
SinI GGWCC 4 cut(s) 202, 392, 400, 1288
SlaI CTCGAG 1 cut(s) 1283
SmiMI CAYNNNNRTG 2 cut(s) 1181, 1197
SmlI CTYRAG 3 cut(s) 77, 947, 1283
SmoI CTYRAG 3 cut(s) 77, 947, 1283
SpeI ACTAGT 2 cut(s) 46, 1036
Sse9I AATT 7 cut(s) 39, 175, 476, 1076, 1442, 1462, 1523
SsiI CCGC 7 cut(s) 440, 473, 513, 650, 1196, 1331, 1366
SspDI GGCGCC 1 cut(s) 1515
SspI AATATT 2 cut(s) 185, 462
SspMI CTAG 6 cut(s) 47, 675, 917, 1037, 1100, 1224
SstI GAGCTC 1 cut(s) 11
StyD4I CCNGG 3 cut(s) 198, 1402, 1511
StyI CCWWGG 3 cut(s) 403, 907, 1472
TaaI ACNGT 4 cut(s) 594, 835, 1027, 1301
TaiI ACGT 1 cut(s) 316
TaqI TCGA 6 cut(s) 1054, 1067, 1135, 1284, 1488, 1563
TaqII GACCGA 1 cut(s) 388
TasI AATT 7 cut(s) 39, 175, 476, 1076, 1442, 1462, 1523
TatI WGTACW 1 cut(s) 1022
TauI GCSGC 2 cut(s) 516, 1369
TfiI GAWTC 3 cut(s) 300, 1294, 1334
Tru1I TTAA 5 cut(s) 105, 345, 458, 1170, 1599
Tru9I TTAA 5 cut(s) 105, 345, 458, 1170, 1599
TscAI CASTG 3 cut(s) 783, 840, 858
TseFI GTSAC 3 cut(s) 209, 764, 835
TseI GCWGC 1 cut(s) 370
Tsp45I GTSAC 3 cut(s) 209, 764, 835
TspRI CASTG 3 cut(s) 783, 840, 858
Van91I CCANNNNNTGG 1 cut(s) 633
VpaK11BI GGWCC 4 cut(s) 202, 392, 400, 1288
XapI RAATTY 1 cut(s) 1442
XceI RCATGY 3 cut(s) 446, 865, 1180
XcmI CCANNNNNNNNNTGG 2 cut(s) 196, 1778
XhoI CTCGAG 1 cut(s) 1283
XmiI GTMKAC 2 cut(s) 51, 1054
XmnI GAANNNNTTC 1 cut(s) 978
XspI CTAG 6 cut(s) 47, 675, 917, 1037, 1100, 1224
Zsp2I ATGCAT 3 cut(s) 23, 805, 1594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.