Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0006138

Physical Location & Seq

Genomic Coordinates Reverse (-)

25199689 .. 25202405

Gene Structure 2717 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00185760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGGAAGCTCTGTCTTTTGCAAGCCCAATAAATTACAAGACAACCACAATACAAAAGAAGAGGCAAGGCACAAGCCCTACTCCACATTGTCATGATGAGCTCTTTGAGAAGCATTGCAAACACCCAACAATTGCACTAGTAGACTCATCCACCACTCTCAAAGATCTCAAGCAAATCCACACCGAACTCCTCATTAACGGTGTTCTCAACGATCCTCATCTCTCCGGCAACTTTGTTGCCACCATTGCTGTCCGGAACCCCAACAATTTGGAATATTCCAACCGAGTCCTGGATCAATGTGACAACCCATCTCTCTTCACCTTCAACTCCATGATCAGCGCCTATTCCAAAAGTTCCACACCCAGTAAAAGCTTTCACTTTTACAGCAGAATCCTCCATTCAAGTAACAATCTTCTACCCGATAACTACACATTTAACTTCTTGGTTCGCACTTCTGCGCAGCTTTCGTCATTTGAGACAGGTCCTTCGGTCCATGGTGCATTAGTAAAGCATGGATTTGAGAATGACCCGCATGGTCAAAGTGCTTTAATATTTATGTATGCGGAATTGGGTTGCTTGGAACAATGTCATAGAGTGTTTAGCGGCATTGCCAATCCTGATTTGGTGTGTCAGACTGCTATTGTGAGCGCTTGTGCTAAATGTGGGGATGTAGATTATGCATGGTTATTGTTCGATGAAATGCCTGAAAGAGACCCCATTGTTTGGAATGCGATGATTGCTGGGTATGCACAATGTGGGAAGTCTAGGGAAGCTTTGGGTTTGTTCCATTTGATGCAAATGGAGGGTGTGAGGGTGAATGAGGTGTGTATGGTTTCGGTGTTATCTGCGTGTTGTCAATTGGGGGCACTGGATCAAGGGAGATGGGCTCATGCATATTTAGAGAGAAACAAGGTAAGGATGACAGTGACATTGGGGACTGCACTGCTTGACATGTATGCGAAATGTGGGAACATGAGTAAGGCCATGGAAGTGTTTTGGGGGATGAAGGAAAAGAATGTGTATACGTGGAGTGTTGCCTTGGGGGGACTAGCTATGAATGGCTTTGGTGAGAAGTGTCTTGAGCTTTTCTCAGTCATGGAGAAAGAAGGCGTTCGGCCAAATGAAGTTACCTTTGTTTCGGTTCTTAGGGGTTGTACTGTGGTTGGACTAGTGGAGGAAGGTCGTCGACATTTTGACTTGATGAAAGAATTGTATGGGATTGAACCTCAGCTAGAGCATTATGGGTGCATTGTTGACTTATATGGTCGAGCTGGGCGTTTAGATGAAGCCCTGAACTTCATTAACAACATGCCAATGAAGCCTCATGCGGGTGCTTGGGGGCTTTGCTCCACGCTAGTAGAATGTATCGGAATATGGAACTGGGATTCCAAGCTTTATGATGGAGTAAGTAACGTGCGGCAAAATATGAAGGCTAAAGGTGTGAGGAAGCTTCCTGGTTGTAGTGTCATAGAAGTTGATGGGGAAGTTCATGAATATGGAGCCATATTTGTCCAAGCATATACCAGCATCTGCAACAGAAGCAACATGGGAAGAAGACACCAGAGGAAACCAAGAGTCTGGCAACTATCTGCAAAGAACTCCTTGGCATTTCTCTTTCAAGATGGTTGGTCATGTCGTCCTCTTACAGAGGAGCAGAAAACATATGCATCCATAGATGCATATTGCCTGCTTGAAATATTCAATGTCTTCCGAGTGAAGGTCATCCAGGAAGGGATCTTGGTTCACTCTCCTTCTGAACCACATCCCCCCATTGTGAAGCTTGGGTTGAAACAAGTTCTTGAGAAGGTTGATATATGTAATAAAGTTGTAAGGATTAAATTTTGTGAAGCCGTAGATATGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

621

Amino Acids

69.58

Weight (kDa)

6.86

Isoelectric Point (pI)

33.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	238 - 286	3.7e-09	PPR repeat family
PPR	PF01535	241 - 270	5.1e-08	PPR repeat
PPR_2	PF13041	338 - 385	1.5e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006138)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40405 AT5G40405
fragaria_vesca	FvH4_4g32050
malus_domestica	MD13G1079400.v1.1 MD16G1079200.v1.1 MD16G1079300.v1.1
prunus_persica	Prupe.1G267400_v2.0.a1
pyrus_communis	pycom13g06910 pycom16g06850
rosa_chinensis	RchiOBHm_Chr1g0381771 RchiOBHm_Chr4g0440691 RchiOBHm_Chr4g0440711
rosa_laevigata	RLG00000006158 RLG00000008805 RLG00000026207
rosa_multiflora	Rmu_sc0000463.1_g000002 Rmu_sc0008418.1_g000010
rosa_roxburghii	Rroxscaffold_5G00381500 Rroxscaffold_7G00185760
rosa_rugosa	Rorug01G0430800 Rorug04G0327600
rosa_samantha	Rh1BG411600 Rh4AG379300 Rh4BG131000 Rh4BG392100
rosa_wichuraiana	Rw1G039640 Rw4G011000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	459
AccB7I	CCANNNNNTGG	1 cut(s)	723
AccI	GTMKAC	3 cut(s)	141, 1022, 1186
AccIII	TCCGGA	1 cut(s)	252
AciI	CCGC	5 cut(s)	530, 563, 603, 1328, 1417
AclWI	GGATC	4 cut(s)	206, 300, 879, 1742
AcoI	YGGCCR	1 cut(s)	1115
AcsI	RAATTY	1 cut(s)	1838
AdeI	CACNNNGTG	1 cut(s)	755
AfaI	GTAC	1 cut(s)	1156
AfeI	AGCGCT	1 cut(s)	649
AfiI	CCNNNNNNNGG	4 cut(s)	289, 723, 1328, 1717
AflIII	ACRYGT	1 cut(s)	951
AgsI	TTSAA	7 cut(s)	325, 402, 1223, 1619, 1694, 1702, 1789
AhlI	ACTAGT	2 cut(s)	136, 1168
AjnI	CCWGG	3 cut(s)	288, 1453, 1725
AloI	GAACNNNNNNTCC	2 cut(s)	1370, 1402
Alw21I	GWGCWC	1 cut(s)	102
Alw26I	GTCTC	2 cut(s)	470, 705
AlwI	GGATC	4 cut(s)	206, 300, 879, 1742
AlwNI	CAGNNNCTG	1 cut(s)	1530
Aor13HI	TCCGGA	1 cut(s)	252
Aor51HI	AGCGCT	1 cut(s)	649
AoxI	GGCC	2 cut(s)	981, 1115
ApeKI	GCWGC	1 cut(s)	460
ApoI	RAATTY	1 cut(s)	1838
ArsI	GACNNNNNNTTYG	2 cut(s)	469, 501
Asp700I	GAANNNNTTC	1 cut(s)	1110
AspLEI	GCGC	3 cut(s)	341, 460, 650
AspS9I	GGNCC	2 cut(s)	482, 490
AsuHPI	GGTGA	3 cut(s)	310, 826, 1079
AvaII	GGWCC	2 cut(s)	482, 490
BaeGI	GKGCMC	1 cut(s)	868
BanII	GRGCYC	2 cut(s)	102, 889
BbsI	GAAGAC	2 cut(s)	1561, 1699
Bbv12I	GWGCWC	1 cut(s)	102
BbvCI	CCTCAGC	1 cut(s)	1227
BbvI	GCAGC	1 cut(s)	472
BccI	CCATC	5 cut(s)	316, 876, 1394, 1472, 1616
BceAI	ACGGC	1 cut(s)	1835
BciT130I	CCWGG	3 cut(s)	290, 1455, 1727
BclI	TGATCA	1 cut(s)	333
BcoDI	GTCTC	2 cut(s)	470, 705
BcuI	ACTAGT	2 cut(s)	136, 1168
BfaI	CTAG	6 cut(s)	137, 765, 1049, 1169, 1232, 1355
BfoI	RGCGCY	2 cut(s)	342, 651
BglII	AGATCT	1 cut(s)	163
BisI	GCNGC	3 cut(s)	461, 604, 1418
BlsI	GCNGC	3 cut(s)	462, 605, 1419
Bme1390I	CCNGG	3 cut(s)	290, 1455, 1727
Bme18I	GGWCC	2 cut(s)	482, 490
BmgT120I	GGNCC	2 cut(s)	482, 490
BmiI	GGNNCC	2 cut(s)	257, 1501
BmrFI	CCNGG	3 cut(s)	290, 1455, 1727
BmrI	ACTGGG	2 cut(s)	357, 1390
BmsI	GCATC	4 cut(s)	783, 1536, 1666, 1676
BmuI	ACTGGG	2 cut(s)	357, 1390
BpiI	GAAGAC	2 cut(s)	1561, 1699
BplI	GAGNNNNNCTC	4 cut(s)	871, 903, 1073, 1105
Bpu10I	CCTNAGC	1 cut(s)	1227
BpuEI	CTTGAG	3 cut(s)	152, 1100, 1820
BsaAI	YACGTR	1 cut(s)	1026
BsaBI	GATNNNNATC	1 cut(s)	216
BsaI	GGTCTC	1 cut(s)	705
BsaJI	CCNNGG	4 cut(s)	493, 984, 1038, 1602
BsaWI	WCCGGW	1 cut(s)	252
Bsc4I	CCNNNNNNNGG	4 cut(s)	289, 723, 1328, 1717
Bse1I	ACTGG	3 cut(s)	363, 873, 1385
Bse3DI	GCAATG	3 cut(s)	112, 243, 606
Bse8I	GATNNNNATC	1 cut(s)	216
BseAI	TCCGGA	1 cut(s)	252
BseBI	CCWGG	3 cut(s)	290, 1455, 1727
BseDI	CCNNGG	4 cut(s)	493, 984, 1038, 1602
BseGI	GGATG	7 cut(s)	146, 673, 924, 1008, 1667, 1722, 1762
BseJI	GATNNNNATC	1 cut(s)	216
BseLI	CCNNNNNNNGG	4 cut(s)	289, 723, 1328, 1717
BseMI	GCAATG	3 cut(s)	112, 243, 606
BseMII	CTCAG	2 cut(s)	1104, 1241
BseNI	ACTGG	3 cut(s)	363, 873, 1385
BseRI	GAGGAG	2 cut(s)	179, 1664
BseSI	GKGCMC	1 cut(s)	868
BseXI	GCAGC	1 cut(s)	472
BseYI	CCCAGC	2 cut(s)	740, 1271
BsgI	GTGCAG	1 cut(s)	924
BshFI	GGCC	2 cut(s)	983, 1117
BsiHKAI	GWGCWC	1 cut(s)	102
BsiSI	CCGG	2 cut(s)	225, 253
BslFI	GGGAC	2 cut(s)	949, 1059
BslI	CCNNNNNNNGG	4 cut(s)	289, 723, 1328, 1717
BsmAI	GTCTC	2 cut(s)	470, 705
BsmFI	GGGAC	2 cut(s)	949, 1059
BsmI	GAATGC	1 cut(s)	733
BsnI	GGCC	2 cut(s)	983, 1117
Bso31I	GGTCTC	1 cut(s)	705
Bsp1286I	GDGCHC	3 cut(s)	102, 868, 889
Bsp13I	TCCGGA	1 cut(s)	252
Bsp143I	GATC	6 cut(s)	163, 211, 292, 333, 871, 1734
Bsp19I	CCATGG	2 cut(s)	493, 984
BspACI	CCGC	5 cut(s)	530, 563, 603, 1328, 1417
BspANI	GGCC	2 cut(s)	983, 1117
BspCNI	CTCAG	2 cut(s)	1103, 1240
BspEI	TCCGGA	1 cut(s)	252
BspHI	TCATGA	2 cut(s)	91, 1489
BspLI	GGNNCC	2 cut(s)	257, 1501
BspPI	GGATC	4 cut(s)	206, 300, 879, 1742
BspTNI	GGTCTC	1 cut(s)	705
BsrDI	GCAATG	3 cut(s)	112, 243, 606
BsrI	ACTGG	3 cut(s)	363, 873, 1385
BssECI	CCNNGG	4 cut(s)	493, 984, 1038, 1602
BssMI	GATC	6 cut(s)	163, 211, 292, 333, 871, 1734
BssNAI	GTATAC	1 cut(s)	1023
BssT1I	CCWWGG	4 cut(s)	493, 984, 1038, 1602
Bst1107I	GTATAC	1 cut(s)	1023
Bst2UI	CCWGG	3 cut(s)	290, 1455, 1727
Bst4CI	ACNGT	3 cut(s)	200, 925, 1159
Bst6I	CTCTTC	2 cut(s)	53, 320
BstBAI	YACGTR	1 cut(s)	1026
BstC8I	GCNNGC	2 cut(s)	22, 1688
BstDEI	CTNAG	3 cut(s)	1090, 1145, 1227
BstDSI	CCRYGG	2 cut(s)	493, 984
BstF5I	GGATG	7 cut(s)	146, 673, 924, 1008, 1667, 1722, 1762
BstH2I	RGCGCY	2 cut(s)	342, 651
BstHHI	GCGC	3 cut(s)	341, 460, 650
BstKTI	GATC	6 cut(s)	166, 214, 295, 336, 874, 1737
BstMAI	GTCTC	2 cut(s)	470, 705
BstMBI	GATC	6 cut(s)	163, 211, 292, 333, 871, 1734
BstMWI	GCNNNNNNNGC	5 cut(s)	245, 737, 746, 1318, 1539
BstNI	CCWGG	3 cut(s)	290, 1455, 1727
BstNSI	RCATGY	2 cut(s)	955, 1312
BstSCI	CCNGG	3 cut(s)	288, 1453, 1725
BstSLI	GKGCMC	1 cut(s)	868
BstV1I	GCAGC	1 cut(s)	472
BstV2I	GAAGAC	2 cut(s)	1561, 1699
BstX2I	RGATCY	2 cut(s)	163, 1734
BstXI	CCANNNNNNTGG	2 cut(s)	268, 1578
BstYI	RGATCY	2 cut(s)	163, 1734
BstZ17I	GTATAC	1 cut(s)	1023
BsuRI	GGCC	2 cut(s)	983, 1117
BtgI	CCRYGG	2 cut(s)	493, 984
BtgZI	GCGATG	1 cut(s)	746
BtsCI	GGATG	7 cut(s)	146, 673, 924, 1008, 1667, 1722, 1762
BtsI	GCAGTG	1 cut(s)	941
BtsIMutI	CAGTG	3 cut(s)	866, 930, 941
Cac8I	GCNNGC	2 cut(s)	22, 1688
CaiI	CAGNNNCTG	1 cut(s)	1530
CciI	TCATGA	2 cut(s)	91, 1489
CfoI	GCGC	3 cut(s)	341, 460, 650
Cfr13I	GGNCC	2 cut(s)	482, 490
Csp6I	GTAC	1 cut(s)	1155
CviQI	GTAC	1 cut(s)	1155
DdeI	CTNAG	3 cut(s)	1090, 1145, 1227
DpnI	GATC	6 cut(s)	165, 213, 294, 335, 873, 1736
DpnII	GATC	6 cut(s)	163, 211, 292, 333, 871, 1734
DraIII	CACNNNGTG	1 cut(s)	755
EaeI	YGGCCR	1 cut(s)	1115
Eam1104I	CTCTTC	2 cut(s)	53, 320
EarI	CTCTTC	2 cut(s)	53, 320
Ecl136II	GAGCTC	1 cut(s)	100
Eco130I	CCWWGG	4 cut(s)	493, 984, 1038, 1602
Eco24I	GRGCYC	2 cut(s)	102, 889
Eco31I	GGTCTC	1 cut(s)	705
Eco47I	GGWCC	2 cut(s)	482, 490
Eco47III	AGCGCT	1 cut(s)	649
Eco53kI	GAGCTC	1 cut(s)	100
EcoICRI	GAGCTC	1 cut(s)	100
EcoO109I	RGGNCCY	1 cut(s)	482
EcoRII	CCWGG	3 cut(s)	288, 1453, 1725
EcoT14I	CCWWGG	4 cut(s)	493, 984, 1038, 1602
EcoT22I	ATGCAT	4 cut(s)	682, 895, 1669, 1681
EcoT38I	GRGCYC	2 cut(s)	102, 889
ErhI	CCWWGG	4 cut(s)	493, 984, 1038, 1602
FalI	AAGNNNNNCTT	2 cut(s)	1586, 1618
FaqI	GGGAC	2 cut(s)	949, 1059
FauI	CCCGC	2 cut(s)	537, 1321
FauNDI	CATATG	1 cut(s)	1663
FbaI	TGATCA	1 cut(s)	333
FblI	GTMKAC	3 cut(s)	141, 1022, 1186
Fnu4HI	GCNGC	3 cut(s)	461, 604, 1418
FokI	GGATG	7 cut(s)	133, 680, 931, 1015, 1654, 1709, 1749
FriOI	GRGCYC	2 cut(s)	102, 889
Fsp4HI	GCNGC	3 cut(s)	461, 604, 1418
FspBI	CTAG	6 cut(s)	137, 765, 1049, 1169, 1232, 1355
FspI	TGCGCA	1 cut(s)	459
GlaI	GCGC	3 cut(s)	340, 459, 649
GluI	GCNGC	3 cut(s)	461, 604, 1418
GsaI	CCCAGC	2 cut(s)	744, 1275
HaeII	RGCGCY	2 cut(s)	342, 651
HaeIII	GGCC	2 cut(s)	983, 1117
HapII	CCGG	2 cut(s)	225, 253
HhaI	GCGC	3 cut(s)	341, 460, 650
Hin6I	GCGC	3 cut(s)	339, 458, 648
HinP1I	GCGC	3 cut(s)	339, 458, 648
HincII	GTYRAC	2 cut(s)	1187, 1255
HindII	GTYRAC	2 cut(s)	1187, 1255
HindIII	AAGCTT	5 cut(s)	370, 771, 1391, 1448, 1778
HinfI	GANTC	5 cut(s)	143, 285, 390, 1385, 1575
HpaII	CCGG	2 cut(s)	225, 253
HphI	GGTGA	3 cut(s)	310, 826, 1079
Hpy166II	GTNNAC	5 cut(s)	142, 1023, 1187, 1255, 1744
Hpy188I	TCNGA	5 cut(s)	633, 1370, 1712, 1756, 1865
Hpy188III	TCNNGA	7 cut(s)	92, 253, 617, 1079, 1490, 1619, 1799
Hpy8I	GTNNAC	5 cut(s)	142, 1023, 1187, 1255, 1744
Hpy99I	CGWCG	1 cut(s)	1188
HpyCH4III	ACNGT	3 cut(s)	200, 925, 1159
HpyCH4IV	ACGT	2 cut(s)	1025, 1413
HpyF10VI	GCNNNNNNNGC	5 cut(s)	245, 737, 746, 1318, 1539
HpyF3I	CTNAG	3 cut(s)	1090, 1145, 1227
HpySE526I	ACGT	2 cut(s)	1025, 1413
HspAI	GCGC	3 cut(s)	339, 458, 648
Kpn2I	TCCGGA	1 cut(s)	252
Ksp22I	TGATCA	1 cut(s)	333
Kzo9I	GATC	6 cut(s)	163, 211, 292, 333, 871, 1734
LmnI	GCTCC	3 cut(s)	1352, 1499, 1651
Lsp1109I	GCAGC	1 cut(s)	472
LweI	GCATC	4 cut(s)	783, 1536, 1666, 1676
MaeI	CTAG	6 cut(s)	137, 765, 1049, 1169, 1232, 1355
MaeII	ACGT	2 cut(s)	1025, 1413
MaeIII	GTNAC	5 cut(s)	299, 404, 925, 1126, 1409
MalI	GATC	6 cut(s)	165, 213, 294, 335, 873, 1736
MboI	GATC	6 cut(s)	163, 211, 292, 333, 871, 1734
MboII	GAAGA	6 cut(s)	70, 307, 404, 1563, 1566, 1699
MfeI	CAATTG	2 cut(s)	129, 857
MflI	RGATCY	2 cut(s)	163, 1734
MhlI	GDGCHC	3 cut(s)	102, 868, 889
MluCI	AATT	7 cut(s)	31, 129, 265, 566, 857, 1208, 1838
MlyI	GAGTC	3 cut(s)	137, 294, 1584
MmeI	TCCRAC	2 cut(s)	303, 1144
Mph1103I	ATGCAT	4 cut(s)	682, 895, 1669, 1681
MroI	TCCGGA	1 cut(s)	252
MroXI	GAANNNNTTC	1 cut(s)	1110
MseI	TTAA	5 cut(s)	195, 435, 548, 1302, 1836
MslI	CAYNNNNRTG	5 cut(s)	90, 989, 1313, 1329, 1494
MspI	CCGG	2 cut(s)	225, 253
MspR9I	CCNGG	3 cut(s)	290, 1455, 1727
MunI	CAATTG	2 cut(s)	129, 857
Mva1269I	GAATGC	1 cut(s)	733
MvaI	CCWGG	3 cut(s)	290, 1455, 1727
MwoI	GCNNNNNNNGC	5 cut(s)	245, 737, 746, 1318, 1539
NcoI	CCATGG	2 cut(s)	493, 984
NdeI	CATATG	1 cut(s)	1663
NdeII	GATC	6 cut(s)	163, 211, 292, 333, 871, 1734
NlaIV	GGNNCC	2 cut(s)	257, 1501
NmuCI	GTSAC	2 cut(s)	299, 925
NsbI	TGCGCA	1 cut(s)	459
NsiI	ATGCAT	4 cut(s)	682, 895, 1669, 1681
NspI	RCATGY	2 cut(s)	955, 1312
PagI	TCATGA	2 cut(s)	91, 1489
PciI	ACATGT	1 cut(s)	951
PcsI	WCGNNNNNNNCGW	1 cut(s)	1273
PctI	GAATGC	1 cut(s)	733
PdmI	GAANNNNTTC	1 cut(s)	1110
PfeI	GAWTC	2 cut(s)	390, 1385
PflMI	CCANNNNNTGG	1 cut(s)	723
PfoI	TCCNGGA	2 cut(s)	288, 1725
PkrI	GCNGC	3 cut(s)	462, 605, 1419
PleI	GAGTC	3 cut(s)	137, 293, 1583
PpsI	GAGTC	3 cut(s)	137, 293, 1583
Ppu21I	YACGTR	1 cut(s)	1026
PpuMI	RGGWCCY	1 cut(s)	482
PscI	ACATGT	1 cut(s)	951
Psp124BI	GAGCTC	1 cut(s)	102
Psp5II	RGGWCCY	1 cut(s)	482
Psp6I	CCWGG	3 cut(s)	288, 1453, 1725
PspFI	CCCAGC	2 cut(s)	740, 1271
PspGI	CCWGG	3 cut(s)	288, 1453, 1725
PspN4I	GGNNCC	2 cut(s)	257, 1501
PspPI	GGNCC	2 cut(s)	482, 490
PspPPI	RGGWCCY	1 cut(s)	482
PstNI	CAGNNNCTG	1 cut(s)	1530
PsuI	RGATCY	2 cut(s)	163, 1734
RsaI	GTAC	1 cut(s)	1156
RsaNI	GTAC	1 cut(s)	1155
RseI	CAYNNNNRTG	5 cut(s)	90, 989, 1313, 1329, 1494
SacI	GAGCTC	1 cut(s)	102
SalI	GTCGAC	1 cut(s)	1185
SaqAI	TTAA	5 cut(s)	195, 435, 548, 1302, 1836
SatI	GCNGC	3 cut(s)	461, 604, 1418
Sau3AI	GATC	6 cut(s)	163, 211, 292, 333, 871, 1734
Sau96I	GGNCC	2 cut(s)	482, 490
SchI	GAGTC	3 cut(s)	137, 294, 1584
ScrFI	CCNGG	3 cut(s)	290, 1455, 1727
SduI	GDGCHC	3 cut(s)	102, 868, 889
SfaNI	GCATC	4 cut(s)	783, 1536, 1666, 1676
SinI	GGWCC	2 cut(s)	482, 490
SmiMI	CAYNNNNRTG	5 cut(s)	90, 989, 1313, 1329, 1494
SmlI	CTYRAG	3 cut(s)	167, 1079, 1799
SmoI	CTYRAG	3 cut(s)	167, 1079, 1799
SpeI	ACTAGT	2 cut(s)	136, 1168
Sse9I	AATT	7 cut(s)	31, 129, 265, 566, 857, 1208, 1838
SsiI	CCGC	5 cut(s)	530, 563, 603, 1328, 1417
SspI	AATATT	3 cut(s)	275, 552, 1698
SspMI	CTAG	6 cut(s)	137, 765, 1049, 1169, 1232, 1355
SstI	GAGCTC	1 cut(s)	102
StyD4I	CCNGG	3 cut(s)	288, 1453, 1725
StyI	CCWWGG	4 cut(s)	493, 984, 1038, 1602
TaaI	ACNGT	3 cut(s)	200, 925, 1159
TaiI	ACGT	2 cut(s)	1028, 1416
TaqI	TCGA	3 cut(s)	693, 1186, 1267
TaqII	GACCGA	1 cut(s)	478
TasI	AATT	7 cut(s)	31, 129, 265, 566, 857, 1208, 1838
TatI	WGTACW	1 cut(s)	1154
TauI	GCSGC	2 cut(s)	606, 1420
TfiI	GAWTC	2 cut(s)	390, 1385
Tru1I	TTAA	5 cut(s)	195, 435, 548, 1302, 1836
Tru9I	TTAA	5 cut(s)	195, 435, 548, 1302, 1836
TscAI	CASTG	3 cut(s)	873, 930, 948
TseFI	GTSAC	2 cut(s)	299, 925
TseI	GCWGC	1 cut(s)	460
Tsp45I	GTSAC	2 cut(s)	299, 925
TspRI	CASTG	3 cut(s)	873, 930, 948
Van91I	CCANNNNNTGG	1 cut(s)	723
VpaK11BI	GGWCC	2 cut(s)	482, 490
XapI	RAATTY	1 cut(s)	1838
XceI	RCATGY	2 cut(s)	955, 1312
XcmI	CCANNNNNNNNNTGG	2 cut(s)	286, 619
XmiI	GTMKAC	3 cut(s)	141, 1022, 1186
XmnI	GAANNNNTTC	1 cut(s)	1110
XspI	CTAG	6 cut(s)	137, 765, 1049, 1169, 1232, 1355
Zsp2I	ATGCAT	4 cut(s)	682, 895, 1669, 1681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.