RLG00000006158

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0006138
Physical Location & Seq
Forward (+)
4813972 .. 4815933
1962 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006158

Sequence Viewer

Length: 1854 bp
ATGATGTGCTCTTTGAGATGCATAGCAAAACACCCAACAATTGCACTAGTAGACTCATTCACCACTCTCAAAGATCTCAAGCAAATCCACACCCAACTCCTCATTAACGGCGTCCTCAACGATCCTCACCTCTCCGGCAATTTTGTTGCCACCGTTGCCGTCCGGAACCCCAACAATTTGGAATATTCCAACCGAATCTTGGACCAATGTGACAACCCAACTCTCTTCGCCTTCAACTCCATGATCAGGGCCTATTCCAAAAGCTCCGCACCCACTAAAAGCTTTCACTTTTACAGCAGAATTCTCCATTCACGTAACAATCTTGTCCCCGATAACTACACATTCAACTTCTTGGTTCGCACTTCTGCGCAGCTATCTTCATCTGAGACCGGTCCTTCAGTGCATGGTGCATTAGTAAAGCACGGGTTTGAGAATGACCCGCATGTTCAAAGTGCGTTAATGTTTATGTATGCAGAATTGGGTTGCTTAGAGCAATGCCATAGAGTGTTTAGCGGCATTGCCGAGCCTGATTTGGTGTGTCAAACTGCTATTGTGAGCGCTTGTGCTAAATGTGGGGATGTAGATTATGCACGGCAATTGTTCGATGAAATGCCTGAGAGAGACCCCATTGCTTGGAATGCGATGATTGCGGGGTACGCGCAATGTGGGAAGTCCAGGGAAGCTTTGGGTTTGTTCCATTTGATGCAAATGGAGGGTGTGAGGGTGAATGAGGTGTGTATGGTTTCGGTGTTATCGGCGTGTTGTCACTTGGGGGCACTGGATCAAGGGAGATGGGCTCATGCATATATAGAGAGAAACAAGGTGAGGATGACAGTGACATTGGGGACTGCACTGCTTGACATGTATGCGAAATGTGGGAACATGAGTAAGGCCATGGAAGTGTTTTGGGGGATGAAGGAAAAGAATGTGTATACGTGGAGTGTTGCCTTGGGGGGACTAGCTATGAATGGATTTGGTGAGAAGTGTCTTGAGCTTTTCTCAATCATGGAGAAAGTAGGCGTTCGTCCAAATGAAGTTACCTTTGTTTCGGTTCTTAGGGGTTGTACTGTGGTTGGACTAGTGGAGGAAGGTCGTCGACATTTTGACTCGATGAAAGAATTGTATGGGATTGAACCTCAGCGAGAGCATTATGGGTGCATTGTTGATTTGTATGGCCGAGCTGGGCGTTTAGATGAAGCCCTGAACTTCATTAACAACATGCCAATGAAGCCTCATGCGGGTGCTTGGGGGGCTTTGCTCCACGCTAGTAGAATGTATCGGAATATGGAACTGGGTGAGCTTGCATCGAGAAAGATAGTAGAACTCGAGGACAGGAATCACGGTGCTTATGTGCTTTTGTCCAATATATATGCGGATTCCAAGCTTTATGATGGAGTTAGTAATGTGCGGCAAAATATGAAGGCTAAAGGTGTGAGGAAGCTTCCTGGTTGTAGTGTCATAGAAGTTGATGGGGAAGTTCATGAATTCTTTGCAGGGGACGACAAGTCTCATCCGAGGTATAATGAAATCGAAATGATGCTGGGAGAAATCTCCCGGCGGCTGAAATTAGCAGGTTATGTTGCCAATACCAACCCTGTGCTGTTCGATATAGAAGAAGAAGAGAAAGAGGATGCATTGTTTAAACACAGCGAGAAGTTTGCCATTGCTTTTGGTTTGATCAGTTTGAGAGAAGGAGTGCCCATTAGGATTGTGAAGAACCTCAGGGTCTGTTGGGATTGTCATGATGTAACAAAAATGATATCCAAGATTTTCAATAGAGAGATTATAGTAAGAGATAGAAATAGGTTTCACCATTTTCAAAATGGTGAGTGCTCTTGTAAGGGTTATTGGTGA

Protein Analysis

618

Amino Acids

69.57

Weight (kDa)

6.9

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 208 - 256 1.7e-09 PPR repeat family
PPR PF01535 211 - 240 5.3e-08 PPR repeat
PPR_2 PF13041 308 - 355 5.5e-08 PPR repeat family
E_motif PF20431 426 - 488 1.4e-19 E motif
DYW_deaminase PF14432 525 - 617 7.1e-41 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 369
Acc36I ACCTGC 1 cut(s) 1562
AccB7I CCANNNNNTGG 1 cut(s) 633
AccI GTMKAC 3 cut(s) 51, 932, 1096
AccII CGCG 1 cut(s) 659
AccIII TCCGGA 1 cut(s) 162
AciI CCGC 8 cut(s) 267, 440, 513, 650, 1238, 1373, 1408, 1558
AclWI GGATC 2 cut(s) 116, 789
AcoI YGGCCR 1 cut(s) 1174
AcsI RAATTY 2 cut(s) 300, 1484
AcuI CTGAAG 1 cut(s) 381
AcyI GRCGYC 1 cut(s) 111
AfaI GTAC 2 cut(s) 656, 1066
AfeI AGCGCT 1 cut(s) 559
AfiI CCNNNNNNNGG 4 cut(s) 199, 246, 633, 1238
AflIII ACRYGT 1 cut(s) 861
AgeI ACCGGT 1 cut(s) 389
AgsI TTSAA 6 cut(s) 235, 346, 449, 1133, 1774, 1820
AhdI GACNNNNNGTC 1 cut(s) 1504
AhlI ACTAGT 2 cut(s) 46, 1078
AjnI CCWGG 2 cut(s) 674, 1444
Alw21I GWGCWC 2 cut(s) 11, 1835
Alw26I GTCTC 3 cut(s) 380, 615, 1512
AlwI GGATC 2 cut(s) 116, 789
AlwNI CAGNNNCTG 1 cut(s) 1728
Ama87I CYCGRG 1 cut(s) 1325
Aor13HI TCCGGA 1 cut(s) 162
Aor51HI AGCGCT 1 cut(s) 559
AoxI GGCC 3 cut(s) 249, 891, 1174
ApeKI GCWGC 1 cut(s) 370
ApoI RAATTY 2 cut(s) 300, 1484
AsiGI ACCGGT 1 cut(s) 389
AspLEI GCGC 3 cut(s) 370, 560, 661
AspS9I GGNCC 3 cut(s) 202, 249, 392
AsuC2I CCSGG 1 cut(s) 1555
AsuHPI GGTGA 8 cut(s) 52, 119, 736, 835, 989, 1307, 1802, 1838
AvaI CYCGRG 1 cut(s) 1325
AvaII GGWCC 2 cut(s) 202, 392
AxyI CCTNAGG 1 cut(s) 1721
BaeGI GKGCMC 2 cut(s) 778, 1701
BanII GRGCYC 1 cut(s) 799
Bbv12I GWGCWC 2 cut(s) 11, 1835
BbvCI CCTCAGC 1 cut(s) 1137
BbvI GCAGC 1 cut(s) 382
BccI CCATC 3 cut(s) 786, 1385, 1463
BceAI ACGGC 3 cut(s) 124, 143, 608
BcgI CGANNNNNNTGC 2 cut(s) 1640, 1674
BciT130I CCWGG 2 cut(s) 676, 1446
BclI TGATCA 2 cut(s) 243, 1677
BcnI CCSGG 1 cut(s) 1555
BcoDI GTCTC 3 cut(s) 380, 615, 1512
BcuI ACTAGT 2 cut(s) 46, 1078
BfaI CTAG 4 cut(s) 47, 959, 1079, 1266
BfoI RGCGCY 1 cut(s) 561
BfuAI ACCTGC 1 cut(s) 1562
BglII AGATCT 1 cut(s) 73
BisI GCNGC 4 cut(s) 371, 514, 1409, 1559
BlsI GCNGC 4 cut(s) 372, 515, 1410, 1560
Bme1390I CCNGG 3 cut(s) 676, 1446, 1555
Bme18I GGWCC 2 cut(s) 202, 392
BmeRI GACNNNNNGTC 1 cut(s) 1504
BmeT110I CYCGRG 1 cut(s) 1325
BmgT120I GGNCC 3 cut(s) 202, 249, 392
BmiI GGNNCC 1 cut(s) 167
BmrFI CCNGG 3 cut(s) 676, 1446, 1555
BmrI ACTGGG 1 cut(s) 1301
BmsI GCATC 5 cut(s) 8, 693, 1313, 1527, 1621
BmuI ACTGGG 1 cut(s) 1301
BplI GAGNNNNNCTC 4 cut(s) 781, 813, 983, 1015
Bpu10I CCTNAGC 1 cut(s) 1137
BpuEI CTTGAG 2 cut(s) 62, 1010
BpuMI CCSGG 1 cut(s) 1555
BsaAI YACGTR 2 cut(s) 314, 936
BsaHI GRCGYC 1 cut(s) 111
BsaI GGTCTC 2 cut(s) 380, 615
BsaJI CCNNGG 4 cut(s) 675, 894, 948, 1514
BsaWI WCCGGW 2 cut(s) 162, 389
Bsc4I CCNNNNNNNGG 4 cut(s) 199, 246, 633, 1238
Bse118I RCCGGY 1 cut(s) 389
Bse1I ACTGG 2 cut(s) 783, 1296
Bse21I CCTNAGG 1 cut(s) 1721
Bse3DI GCAATG 5 cut(s) 500, 516, 627, 668, 1662
BseAI TCCGGA 1 cut(s) 162
BseBI CCWGG 2 cut(s) 676, 1446
BseDI CCNNGG 4 cut(s) 675, 894, 948, 1514
BseGI GGATG 5 cut(s) 583, 834, 918, 1510, 1636
BseLI CCNNNNNNNGG 4 cut(s) 199, 246, 633, 1238
BseMI GCAATG 5 cut(s) 500, 516, 627, 668, 1662
BseMII CTCAG 4 cut(s) 375, 606, 1151, 1735
BseNI ACTGG 2 cut(s) 783, 1296
BseRI GAGGAG 1 cut(s) 89
BseSI GKGCMC 2 cut(s) 778, 1701
BseXI GCAGC 1 cut(s) 382
BseYI CCCAGC 2 cut(s) 1181, 1540
BsgI GTGCAG 1 cut(s) 834
Bsh1236I CGCG 1 cut(s) 659
BshFI GGCC 3 cut(s) 251, 893, 1176
BshTI ACCGGT 1 cut(s) 389
BsiHKAI GWGCWC 2 cut(s) 11, 1835
BsiHKCI CYCGRG 1 cut(s) 1325
BsiSI CCGG 4 cut(s) 135, 163, 390, 1555
BslFI GGGAC 4 cut(s) 311, 859, 969, 1511
BslI CCNNNNNNNGG 4 cut(s) 199, 246, 633, 1238
BsmAI GTCTC 3 cut(s) 380, 615, 1512
BsmFI GGGAC 4 cut(s) 311, 859, 969, 1511
BsmI GAATGC 1 cut(s) 643
BsnI GGCC 3 cut(s) 251, 893, 1176
Bso31I GGTCTC 2 cut(s) 380, 615
BsoBI CYCGRG 1 cut(s) 1325
Bsp1286I GDGCHC 5 cut(s) 11, 778, 799, 1701, 1835
Bsp13I TCCGGA 1 cut(s) 162
Bsp143I GATC 5 cut(s) 73, 121, 243, 781, 1677
Bsp19I CCATGG 1 cut(s) 894
BspACI CCGC 8 cut(s) 267, 440, 513, 650, 1238, 1373, 1408, 1558
BspANI GGCC 3 cut(s) 251, 893, 1176
BspCNI CTCAG 4 cut(s) 376, 607, 1150, 1734
BspEI TCCGGA 1 cut(s) 162
BspFNI CGCG 1 cut(s) 659
BspHI TCATGA 2 cut(s) 1480, 1741
BspLI GGNNCC 1 cut(s) 167
BspMI ACCTGC 1 cut(s) 1562
BspPI GGATC 2 cut(s) 116, 789
BspTNI GGTCTC 2 cut(s) 380, 615
BsrDI GCAATG 5 cut(s) 500, 516, 627, 668, 1662
BsrFI RCCGGY 1 cut(s) 389
BsrI ACTGG 2 cut(s) 783, 1296
BssAI RCCGGY 1 cut(s) 389
BssECI CCNNGG 4 cut(s) 675, 894, 948, 1514
BssMI GATC 5 cut(s) 73, 121, 243, 781, 1677
BssNAI GTATAC 1 cut(s) 933
BssNI GRCGYC 1 cut(s) 111
BssT1I CCWWGG 2 cut(s) 894, 948
Bst1107I GTATAC 1 cut(s) 933
Bst2UI CCWGG 2 cut(s) 676, 1446
Bst4CI ACNGT 4 cut(s) 154, 835, 1069, 1343
Bst6I CTCTTC 2 cut(s) 230, 1614
BstACI GRCGYC 1 cut(s) 111
BstBAI YACGTR 2 cut(s) 314, 936
BstC8I GCNNGC 1 cut(s) 1302
BstDEI CTNAG 6 cut(s) 384, 487, 615, 1055, 1137, 1721
BstDSI CCRYGG 1 cut(s) 894
BstF5I GGATG 5 cut(s) 583, 834, 918, 1510, 1636
BstFNI CGCG 1 cut(s) 659
BstH2I RGCGCY 1 cut(s) 561
BstHHI GCGC 3 cut(s) 370, 560, 661
BstKTI GATC 5 cut(s) 76, 124, 246, 784, 1680
BstMAI GTCTC 3 cut(s) 380, 615, 1512
BstMBI GATC 5 cut(s) 73, 121, 243, 781, 1677
BstMWI GCNNNNNNNGC 6 cut(s) 155, 638, 647, 656, 1228, 1250
BstNI CCWGG 2 cut(s) 676, 1446
BstNSI RCATGY 3 cut(s) 446, 865, 1222
BstSCI CCNGG 3 cut(s) 674, 1444, 1553
BstSLI GKGCMC 2 cut(s) 778, 1701
BstUI CGCG 1 cut(s) 659
BstV1I GCAGC 1 cut(s) 382
BstX2I RGATCY 1 cut(s) 73
BstXI CCANNNNNNTGG 1 cut(s) 178
BstYI RGATCY 1 cut(s) 73
BstZ17I GTATAC 1 cut(s) 933
Bsu36I CCTNAGG 1 cut(s) 1721
BsuRI GGCC 3 cut(s) 251, 893, 1176
BtgI CCRYGG 1 cut(s) 894
BtgZI GCGATG 1 cut(s) 656
BtsCI GGATG 5 cut(s) 583, 834, 918, 1510, 1636
BtsI GCAGTG 1 cut(s) 851
BtsIMutI CAGTG 4 cut(s) 405, 776, 840, 851
BveI ACCTGC 1 cut(s) 1562
Cac8I GCNNGC 1 cut(s) 1302
CaiI CAGNNNCTG 1 cut(s) 1728
CciI TCATGA 2 cut(s) 1480, 1741
CfoI GCGC 3 cut(s) 370, 560, 661
Cfr10I RCCGGY 1 cut(s) 389
Cfr13I GGNCC 3 cut(s) 202, 249, 392
CseI GACGC 1 cut(s) 100
Csp6I GTAC 2 cut(s) 655, 1065
CspAI ACCGGT 1 cut(s) 389
CviQI GTAC 2 cut(s) 655, 1065
DdeI CTNAG 6 cut(s) 384, 487, 615, 1055, 1137, 1721
DpnI GATC 5 cut(s) 75, 123, 245, 783, 1679
DpnII GATC 5 cut(s) 73, 121, 243, 781, 1677
DraI TTTAAA 1 cut(s) 1642
DriI GACNNNNNGTC 1 cut(s) 1504
EaeI YGGCCR 1 cut(s) 1174
Eam1104I CTCTTC 2 cut(s) 230, 1614
Eam1105I GACNNNNNGTC 1 cut(s) 1504
EarI CTCTTC 2 cut(s) 230, 1614
Eco130I CCWWGG 2 cut(s) 894, 948
Eco24I GRGCYC 1 cut(s) 799
Eco31I GGTCTC 2 cut(s) 380, 615
Eco32I GATATC 1 cut(s) 1761
Eco47I GGWCC 2 cut(s) 202, 392
Eco47III AGCGCT 1 cut(s) 559
Eco57I CTGAAG 1 cut(s) 381
Eco81I CCTNAGG 1 cut(s) 1721
Eco88I CYCGRG 1 cut(s) 1325
EcoO109I RGGNCCY 1 cut(s) 249
EcoRI GAATTC 2 cut(s) 300, 1484
EcoRII CCWGG 2 cut(s) 674, 1444
EcoRV GATATC 1 cut(s) 1761
EcoT14I CCWWGG 2 cut(s) 894, 948
EcoT22I ATGCAT 3 cut(s) 23, 805, 1636
EcoT38I GRGCYC 1 cut(s) 799
ErhI CCWWGG 2 cut(s) 894, 948
FaqI GGGAC 4 cut(s) 311, 859, 969, 1511
FauI CCCGC 3 cut(s) 447, 643, 1231
FbaI TGATCA 2 cut(s) 243, 1677
FblI GTMKAC 3 cut(s) 51, 932, 1096
Fnu4HI GCNGC 4 cut(s) 371, 514, 1409, 1559
FokI GGATG 5 cut(s) 590, 841, 925, 1497, 1643
FriOI GRGCYC 1 cut(s) 799
Fsp4HI GCNGC 4 cut(s) 371, 514, 1409, 1559
FspBI CTAG 4 cut(s) 47, 959, 1079, 1266
FspI TGCGCA 1 cut(s) 369
GlaI GCGC 3 cut(s) 369, 559, 660
GluI GCNGC 4 cut(s) 371, 514, 1409, 1559
GsaI CCCAGC 2 cut(s) 1185, 1544
HaeII RGCGCY 1 cut(s) 561
HaeIII GGCC 3 cut(s) 251, 893, 1176
HapII CCGG 4 cut(s) 135, 163, 390, 1555
HgaI GACGC 1 cut(s) 100
HhaI GCGC 3 cut(s) 370, 560, 661
Hin1I GRCGYC 1 cut(s) 111
Hin6I GCGC 3 cut(s) 368, 558, 659
HinP1I GCGC 3 cut(s) 368, 558, 659
HincII GTYRAC 1 cut(s) 1097
HindII GTYRAC 1 cut(s) 1097
HindIII AAGCTT 4 cut(s) 280, 681, 1382, 1439
HinfI GANTC 5 cut(s) 53, 195, 1106, 1336, 1376
HpaII CCGG 4 cut(s) 135, 163, 390, 1555
HphI GGTGA 8 cut(s) 52, 119, 736, 835, 989, 1307, 1802, 1838
Hpy166II GTNNAC 3 cut(s) 52, 933, 1097
Hpy188I TCNGA 3 cut(s) 385, 1281, 1515
Hpy188III TCNNGA 5 cut(s) 163, 989, 1308, 1481, 1742
Hpy8I GTNNAC 3 cut(s) 52, 933, 1097
Hpy99I CGWCG 1 cut(s) 1098
HpyAV CCTTC 6 cut(s) 241, 405, 910, 1082, 1414, 1685
HpyCH4III ACNGT 4 cut(s) 154, 835, 1069, 1343
HpyCH4IV ACGT 2 cut(s) 313, 935
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 638, 647, 656, 1228, 1250
HpyF3I CTNAG 6 cut(s) 384, 487, 615, 1055, 1137, 1721
HpySE526I ACGT 2 cut(s) 313, 935
Hsp92I GRCGYC 1 cut(s) 111
HspAI GCGC 3 cut(s) 368, 558, 659
Kpn2I TCCGGA 1 cut(s) 162
Ksp22I TGATCA 2 cut(s) 243, 1677
Kzo9I GATC 5 cut(s) 73, 121, 243, 781, 1677
LmnI GCTCC 2 cut(s) 269, 1263
Lsp1109I GCAGC 1 cut(s) 382
LweI GCATC 5 cut(s) 8, 693, 1313, 1527, 1621
MaeI CTAG 4 cut(s) 47, 959, 1079, 1266
MaeII ACGT 2 cut(s) 313, 935
MaeIII GTNAC 6 cut(s) 209, 314, 764, 835, 1036, 1747
MalI GATC 5 cut(s) 75, 123, 245, 783, 1679
MboI GATC 5 cut(s) 73, 121, 243, 781, 1677
MboII GAAGA 6 cut(s) 217, 369, 1625, 1628, 1631, 1726
MfeI CAATTG 2 cut(s) 39, 596
MflI RGATCY 1 cut(s) 73
MhlI GDGCHC 5 cut(s) 11, 778, 799, 1701, 1835
MluCI AATT 9 cut(s) 39, 139, 175, 300, 476, 596, 1118, 1484, 1565
MlyI GAGTC 2 cut(s) 47, 1100
MmeI TCCRAC 2 cut(s) 213, 1054
Mph1103I ATGCAT 3 cut(s) 23, 805, 1636
MroI TCCGGA 1 cut(s) 162
MseI TTAA 4 cut(s) 105, 458, 1212, 1641
MslI CAYNNNNRTG 3 cut(s) 899, 1223, 1239
MspI CCGG 4 cut(s) 135, 163, 390, 1555
MspR9I CCNGG 3 cut(s) 676, 1446, 1555
MssI GTTTAAAC 1 cut(s) 1642
MunI CAATTG 2 cut(s) 39, 596
Mva1269I GAATGC 1 cut(s) 643
MvaI CCWGG 2 cut(s) 676, 1446
MvnI CGCG 1 cut(s) 659
MwoI GCNNNNNNNGC 6 cut(s) 155, 638, 647, 656, 1228, 1250
NciI CCSGG 1 cut(s) 1555
NcoI CCATGG 1 cut(s) 894
NdeII GATC 5 cut(s) 73, 121, 243, 781, 1677
NlaIV GGNNCC 1 cut(s) 167
NmeAIII GCCGAG 2 cut(s) 547, 1202
NmuCI GTSAC 3 cut(s) 209, 764, 835
NsbI TGCGCA 1 cut(s) 369
NsiI ATGCAT 3 cut(s) 23, 805, 1636
NspI RCATGY 3 cut(s) 446, 865, 1222
PaeR7I CTCGAG 1 cut(s) 1325
PagI TCATGA 2 cut(s) 1480, 1741
PciI ACATGT 1 cut(s) 861
PctI GAATGC 1 cut(s) 643
PfeI GAWTC 3 cut(s) 195, 1336, 1376
PflMI CCANNNNNTGG 1 cut(s) 633
PinAI ACCGGT 1 cut(s) 389
PkrI GCNGC 4 cut(s) 372, 515, 1410, 1560
PleI GAGTC 2 cut(s) 47, 1100
PmeI GTTTAAAC 1 cut(s) 1642
PpsI GAGTC 2 cut(s) 47, 1100
Ppu21I YACGTR 2 cut(s) 314, 936
PscI ACATGT 1 cut(s) 861
Psp6I CCWGG 2 cut(s) 674, 1444
PspFI CCCAGC 2 cut(s) 1181, 1540
PspGI CCWGG 2 cut(s) 674, 1444
PspN4I GGNNCC 1 cut(s) 167
PspPI GGNCC 3 cut(s) 202, 249, 392
PspXI VCTCGAGB 1 cut(s) 1325
PstNI CAGNNNCTG 1 cut(s) 1728
PsuI RGATCY 1 cut(s) 73
RsaI GTAC 2 cut(s) 656, 1066
RsaNI GTAC 2 cut(s) 655, 1065
RseI CAYNNNNRTG 3 cut(s) 899, 1223, 1239
SalI GTCGAC 1 cut(s) 1095
SaqAI TTAA 4 cut(s) 105, 458, 1212, 1641
SatI GCNGC 4 cut(s) 371, 514, 1409, 1559
Sau3AI GATC 5 cut(s) 73, 121, 243, 781, 1677
Sau96I GGNCC 3 cut(s) 202, 249, 392
SchI GAGTC 2 cut(s) 47, 1100
ScrFI CCNGG 3 cut(s) 676, 1446, 1555
SduI GDGCHC 5 cut(s) 11, 778, 799, 1701, 1835
SfaNI GCATC 5 cut(s) 8, 693, 1313, 1527, 1621
Sfr274I CTCGAG 1 cut(s) 1325
SinI GGWCC 2 cut(s) 202, 392
SlaI CTCGAG 1 cut(s) 1325
SmiMI CAYNNNNRTG 3 cut(s) 899, 1223, 1239
SmlI CTYRAG 3 cut(s) 77, 989, 1325
SmoI CTYRAG 3 cut(s) 77, 989, 1325
SpeI ACTAGT 2 cut(s) 46, 1078
Sse9I AATT 9 cut(s) 39, 139, 175, 300, 476, 596, 1118, 1484, 1565
SsiI CCGC 8 cut(s) 267, 440, 513, 650, 1238, 1373, 1408, 1558
SspI AATATT 1 cut(s) 185
SspMI CTAG 4 cut(s) 47, 959, 1079, 1266
StyD4I CCNGG 3 cut(s) 674, 1444, 1553
StyI CCWWGG 2 cut(s) 894, 948
TaaI ACNGT 4 cut(s) 154, 835, 1069, 1343
TaiI ACGT 2 cut(s) 316, 938
TaqI TCGA 7 cut(s) 603, 1096, 1109, 1307, 1326, 1530, 1605
TasI AATT 9 cut(s) 39, 139, 175, 300, 476, 596, 1118, 1484, 1565
TatI WGTACW 1 cut(s) 1064
TauI GCSGC 3 cut(s) 516, 1411, 1561
TfiI GAWTC 3 cut(s) 195, 1336, 1376
Tru1I TTAA 4 cut(s) 105, 458, 1212, 1641
Tru9I TTAA 4 cut(s) 105, 458, 1212, 1641
TscAI CASTG 4 cut(s) 405, 783, 840, 858
TseFI GTSAC 3 cut(s) 209, 764, 835
TseI GCWGC 1 cut(s) 370
Tsp45I GTSAC 3 cut(s) 209, 764, 835
TspRI CASTG 4 cut(s) 405, 783, 840, 858
Van91I CCANNNNNTGG 1 cut(s) 633
VpaK11BI GGWCC 2 cut(s) 202, 392
XapI RAATTY 2 cut(s) 300, 1484
XceI RCATGY 3 cut(s) 446, 865, 1222
XcmI CCANNNNNNNNNTGG 3 cut(s) 196, 682, 1820
XhoI CTCGAG 1 cut(s) 1325
XmiI GTMKAC 3 cut(s) 51, 932, 1096
XspI CTAG 4 cut(s) 47, 959, 1079, 1266
Zsp2I ATGCAT 3 cut(s) 23, 805, 1636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.