Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0006138

Physical Location & Seq

Genomic Coordinates Forward (+)

39691551 .. 39694235

Gene Structure 2685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008805

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGATGAGCTCTTTGAGATGCATTGCAAAACACCCAACAATTGCACTAGTAGACTCATCCACCACTCTCAAAGATCTCAAGCAAATCCACACCCAACTCCTCATTAACGGCGTTCTCAACGATCCTCATCTCTCCGGCAACTTTGTTGCCACCATTGCCGTACGGAACCCCAATAATTTGGAATATTCCAACCGAGTCCTGGATCAATGTGACAACCCATCTCTCTTCACCTTCAACTCCATGATCAGGGCCTATTCCAAAAGTTCCACACCTAGTAAAAGCTTTCACTTTTACAGCAGAATCCTCCATTCAAGTAACAATCTTCGACCTGATAACTACACATTTAACTTCTTGGTTCGCACTTCTGCGCAGCATTCGTCATTTGAGACAGGTCCTTCGGTCCATGGTGCATTAGTAAAGCATGGATTTGAGAATGACCCGCATGGTCAAAGTGCTTTAATATTTATGTATGCGGAATTGGGTTGCTTGGAGCAATGTCATAGAGTGTTTAGCGGCATTGCTGATCCTGATTTGGTGTGTCAGACTGCTATTGTGAGCGCTTGTGCTAAATGTGGGGATGTAGATTATGCACGGTTATTGTTCGATGAAATGCCTGAAAGAGACCCCATTGCTTGGAATGCGATGATTGCGGGGTATGCACAATGTGGGAAGTCTAGGGAAGCTTTGGGTTTGTTTCATTTGATGCAAATGGAGGGTGTGAGGGTGAATGAGGTGTGTATGGTTTCGGTGTTATCGGCGTGTTGTCACTTGGGGGCACTGGATCAAGGGAGATGGGCTCATGCATATATAGAGAGAAACAAGGTGAGGATGACAGTGACATTGGGGACTGCACTGCTTGACATGTATGCGAAATGTGGGAATATGAGTAAGGCCATGGAAGTGTTTTGGGGGATGAAGGAAAAGAATGTGTATACGTGGAGTGTTGCTTTGGGGGGACTAGCTATGAATGGCTTTGGTGAGAAGTGTCTTGAGCTTTTCTCAGTCATGGAGAAAGAAGGCGTTCGACCAAATGAAGTTACCTTTGTTTCGGTTCTTAGGGGTTGTACTGTGGTTGGACTAGTGGAGGAAGGTCGTCGACATTTTGACTCGATGAAAGAATTGTATGGGATTGAACCTCAGCTAGAGCATTATGGTTGCATTGTTGACTTATATGGTCGAGCTGGGCGTTTAGATGAAGCCCTGAACTTCATTAACAACATGCCAATGAAGCCTCATGCGGGTGCTTGGGGGGCTTTGCTCCACGCTAGTAGAATGTATCGGAATATGGAACTGGGTGAGCTTGTGTCGAGAAAGATAGTAGAACTCGAGGACAGGAATCACGGTGCTTATGTGCTTTTGTCCAATATATATGCGGATTCCAAGCTTTATGATGGAGTAAGTAACGTGCGGCAAAATATGAAGGCTAAAGGTGTGAGGAAGCTTCCTGGTTGTAGTGTCATAGAAGTTGATGGGGAAGTTCATGAATATGGAGCCATATTTGTCCAAGCATATACCAGCATCTGCAACAGAAGCAACATGGGAAGAAGACACCAGAGGAAACCAAGAGTCATCCAGGAAGGGATCTTAGTTCACTCTCCTTCTGAACCACATCCCCCCATTGTGAAGCTTGGGTTGAAACAAGTTCTTGAGAAGGTTGATATATGTAATAAAGTTGTAAGGATTAAATTTTGTGAAGCTGTAGATATGGTCCGAGCTACCGATGTTTCTAATGATATAACTACTGTAGAGGGAACAGCTATTATGACACAGCGTAGGTATACCCAGCCTATGGATGAAGTTCTCTTGAAGGTTGTGAGCAAATATGGGGAAAAGATTTTGCTAGGAGAATCTGATAAGAAAGCCAAAGCTACAAAAGAAAAGGCAAAAGGCAGTCATCAGTGGTTTATGCTGAGTTTTCTTGAAGTACAATATCTTGATGATTGGAAAGGCCCCGCACCATGGGATTTGACTGTAGGAGGTGATGGACATCAAAAGTTTTTATGTGATGTGAAGGTGAGTTCTCTTATATGTTTATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

680

Amino Acids

75.95

Weight (kDa)

7.77

Isoelectric Point (pI)

30.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	208 - 256	1.9e-09	PPR repeat family
PPR	PF01535	211 - 240	6e-08	PPR repeat
PPR_2	PF13041	308 - 355	1.5e-08	PPR repeat family
E_motif	PF20431	426 - 488	2.5e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006138)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40405 AT5G40405
fragaria_vesca	FvH4_4g32050
malus_domestica	MD13G1079400.v1.1 MD16G1079200.v1.1 MD16G1079300.v1.1
prunus_persica	Prupe.1G267400_v2.0.a1
pyrus_communis	pycom13g06910 pycom16g06850
rosa_chinensis	RchiOBHm_Chr1g0381771 RchiOBHm_Chr4g0440691 RchiOBHm_Chr4g0440711
rosa_laevigata	RLG00000006158 RLG00000008805 RLG00000026207
rosa_multiflora	Rmu_sc0000463.1_g000002 Rmu_sc0008418.1_g000010
rosa_roxburghii	Rroxscaffold_5G00381500 Rroxscaffold_7G00185760
rosa_rugosa	Rorug01G0430800 Rorug04G0327600
rosa_samantha	Rh1BG411600 Rh4AG379300 Rh4BG131000 Rh4BG392100
rosa_wichuraiana	Rw1G039640 Rw4G011000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	369
AccB7I	CCANNNNNTGG	2 cut(s)	633, 1789
AccI	GTMKAC	4 cut(s)	51, 932, 1096, 1778
AciI	CCGC	8 cut(s)	440, 473, 513, 650, 1238, 1373, 1408, 1953
AclWI	GGATC	5 cut(s)	116, 210, 518, 789, 1589
AcsI	RAATTY	1 cut(s)	1685
AdeI	CACNNNGTG	1 cut(s)	665
AfaI	GTAC	3 cut(s)	162, 1066, 1926
AfeI	AGCGCT	1 cut(s)	559
AfiI	CCNNNNNNNGG	6 cut(s)	199, 246, 633, 1238, 1789, 1959
AflIII	ACRYGT	1 cut(s)	861
AgsI	TTSAA	6 cut(s)	235, 312, 1133, 1636, 1807, 1922
AhlI	ACTAGT	2 cut(s)	46, 1078
AjnI	CCWGG	3 cut(s)	198, 1444, 1572
Alw21I	GWGCWC	1 cut(s)	11
Alw26I	GTCTC	2 cut(s)	380, 615
AlwI	GGATC	5 cut(s)	116, 210, 518, 789, 1589
AlwNI	CAGNNNCTG	1 cut(s)	1521
Ama87I	CYCGRG	1 cut(s)	1325
Aor51HI	AGCGCT	1 cut(s)	559
AoxI	GGCC	3 cut(s)	249, 891, 1948
ApeKI	GCWGC	1 cut(s)	370
ApoI	RAATTY	1 cut(s)	1685
ArsI	GACNNNNNNTTYG	2 cut(s)	379, 411
Asp700I	GAANNNNTTC	1 cut(s)	1020
AspLEI	GCGC	2 cut(s)	370, 560
AspS9I	GGNCC	5 cut(s)	249, 392, 400, 1708, 1949
AsuHPI	GGTGA	7 cut(s)	220, 736, 835, 989, 1307, 1991, 2026
AvaI	CYCGRG	1 cut(s)	1325
AvaII	GGWCC	3 cut(s)	392, 400, 1708
BaeGI	GKGCMC	1 cut(s)	778
BanII	GRGCYC	2 cut(s)	11, 799
BbsI	GAAGAC	1 cut(s)	1552
Bbv12I	GWGCWC	1 cut(s)	11
BbvCI	CCTCAGC	1 cut(s)	1137
BbvI	GCAGC	1 cut(s)	382
BccI	CCATC	5 cut(s)	226, 786, 1385, 1463, 1976
BceAI	ACGGC	2 cut(s)	124, 143
BciT130I	CCWGG	3 cut(s)	200, 1446, 1574
BclI	TGATCA	1 cut(s)	243
BcoDI	GTCTC	2 cut(s)	380, 615
BcuI	ACTAGT	2 cut(s)	46, 1078
BfaI	CTAG	9 cut(s)	47, 273, 675, 959, 1079, 1142, 1266, 1841, 2038
BfmI	CTRYAG	3 cut(s)	1698, 1743, 1971
BfoI	RGCGCY	1 cut(s)	561
BglII	AGATCT	1 cut(s)	73
BisI	GCNGC	3 cut(s)	371, 514, 1409
BlsI	GCNGC	3 cut(s)	372, 515, 1410
Bme1390I	CCNGG	3 cut(s)	200, 1446, 1574
Bme18I	GGWCC	3 cut(s)	392, 400, 1708
BmeT110I	CYCGRG	1 cut(s)	1325
BmgT120I	GGNCC	5 cut(s)	249, 392, 400, 1708, 1949
BmiI	GGNNCC	3 cut(s)	167, 1492, 1951
BmrFI	CCNGG	3 cut(s)	200, 1446, 1574
BmrI	ACTGGG	1 cut(s)	1301
BmsI	GCATC	3 cut(s)	8, 693, 1527
BmuI	ACTGGG	1 cut(s)	1301
BpiI	GAAGAC	1 cut(s)	1552
BplI	GAGNNNNNCTC	4 cut(s)	781, 813, 983, 1015
Bpu10I	CCTNAGC	1 cut(s)	1137
BpuEI	CTTGAG	3 cut(s)	62, 1010, 1667
BsaAI	YACGTR	1 cut(s)	936
BsaBI	GATNNNNATC	2 cut(s)	126, 1986
BsaI	GGTCTC	1 cut(s)	615
BsaJI	CCNNGG	3 cut(s)	403, 894, 1958
Bsc4I	CCNNNNNNNGG	6 cut(s)	199, 246, 633, 1238, 1789, 1959
Bse1I	ACTGG	2 cut(s)	783, 1296
Bse3DI	GCAATG	5 cut(s)	21, 153, 500, 516, 627
Bse8I	GATNNNNATC	2 cut(s)	126, 1986
BseBI	CCWGG	3 cut(s)	200, 1446, 1574
BseDI	CCNNGG	3 cut(s)	403, 894, 1958
BseGI	GGATG	7 cut(s)	56, 583, 834, 918, 1569, 1609, 1798
BseJI	GATNNNNATC	2 cut(s)	126, 1986
BseLI	CCNNNNNNNGG	6 cut(s)	199, 246, 633, 1238, 1789, 1959
BseMI	GCAATG	5 cut(s)	21, 153, 500, 516, 627
BseMII	CTCAG	3 cut(s)	1014, 1151, 1901
BseNI	ACTGG	2 cut(s)	783, 1296
BseRI	GAGGAG	1 cut(s)	89
BseSI	GKGCMC	1 cut(s)	778
BseXI	GCAGC	1 cut(s)	382
BseYI	CCCAGC	2 cut(s)	1181, 1782
BsgI	GTGCAG	1 cut(s)	834
BshFI	GGCC	3 cut(s)	251, 893, 1950
BsiHKAI	GWGCWC	1 cut(s)	11
BsiHKCI	CYCGRG	1 cut(s)	1325
BsiSI	CCGG	1 cut(s)	135
BsiWI	CGTACG	1 cut(s)	160
BslFI	GGGAC	2 cut(s)	859, 969
BslI	CCNNNNNNNGG	6 cut(s)	199, 246, 633, 1238, 1789, 1959
BsmAI	GTCTC	2 cut(s)	380, 615
BsmFI	GGGAC	2 cut(s)	859, 969
BsmI	GAATGC	2 cut(s)	373, 643
BsnI	GGCC	3 cut(s)	251, 893, 1950
Bso31I	GGTCTC	1 cut(s)	615
BsoBI	CYCGRG	1 cut(s)	1325
Bsp1286I	GDGCHC	3 cut(s)	11, 778, 799
Bsp143I	GATC	7 cut(s)	73, 121, 202, 243, 523, 781, 1581
Bsp19I	CCATGG	3 cut(s)	403, 894, 1958
BspACI	CCGC	8 cut(s)	440, 473, 513, 650, 1238, 1373, 1408, 1953
BspANI	GGCC	3 cut(s)	251, 893, 1950
BspCNI	CTCAG	3 cut(s)	1013, 1150, 1902
BspHI	TCATGA	1 cut(s)	1480
BspLI	GGNNCC	3 cut(s)	167, 1492, 1951
BspPI	GGATC	5 cut(s)	116, 210, 518, 789, 1589
BspTNI	GGTCTC	1 cut(s)	615
BsrDI	GCAATG	5 cut(s)	21, 153, 500, 516, 627
BsrI	ACTGG	2 cut(s)	783, 1296
BssECI	CCNNGG	3 cut(s)	403, 894, 1958
BssMI	GATC	7 cut(s)	73, 121, 202, 243, 523, 781, 1581
BssNAI	GTATAC	2 cut(s)	933, 1779
BssT1I	CCWWGG	3 cut(s)	403, 894, 1958
Bst1107I	GTATAC	2 cut(s)	933, 1779
Bst2UI	CCWGG	3 cut(s)	200, 1446, 1574
Bst4CI	ACNGT	6 cut(s)	594, 835, 1069, 1343, 1744, 1972
Bst6I	CTCTTC	1 cut(s)	230
BstBAI	YACGTR	1 cut(s)	936
BstDEI	CTNAG	5 cut(s)	1000, 1055, 1137, 1585, 1910
BstDSI	CCRYGG	3 cut(s)	403, 894, 1958
BstF5I	GGATG	7 cut(s)	56, 583, 834, 918, 1569, 1609, 1798
BstH2I	RGCGCY	1 cut(s)	561
BstHHI	GCGC	2 cut(s)	370, 560
BstKTI	GATC	7 cut(s)	76, 124, 205, 246, 526, 784, 1584
BstMAI	GTCTC	2 cut(s)	380, 615
BstMBI	GATC	7 cut(s)	73, 121, 202, 243, 523, 781, 1581
BstMWI	GCNNNNNNNGC	7 cut(s)	155, 638, 647, 656, 1228, 1250, 1530
BstNI	CCWGG	3 cut(s)	200, 1446, 1574
BstNSI	RCATGY	2 cut(s)	865, 1222
BstSCI	CCNGG	3 cut(s)	198, 1444, 1572
BstSFI	CTRYAG	3 cut(s)	1698, 1743, 1971
BstSLI	GKGCMC	1 cut(s)	778
BstV1I	GCAGC	1 cut(s)	382
BstV2I	GAAGAC	1 cut(s)	1552
BstX2I	RGATCY	2 cut(s)	73, 1581
BstXI	CCANNNNNNTGG	1 cut(s)	178
BstYI	RGATCY	2 cut(s)	73, 1581
BstZ17I	GTATAC	2 cut(s)	933, 1779
BsuRI	GGCC	3 cut(s)	251, 893, 1950
BtgI	CCRYGG	3 cut(s)	403, 894, 1958
BtgZI	GCGATG	1 cut(s)	656
BtsCI	GGATG	7 cut(s)	56, 583, 834, 918, 1569, 1609, 1798
BtsI	GCAGTG	1 cut(s)	851
BtsIMutI	CAGTG	4 cut(s)	776, 840, 851, 1904
CaiI	CAGNNNCTG	1 cut(s)	1521
CciI	TCATGA	1 cut(s)	1480
CfoI	GCGC	2 cut(s)	370, 560
Cfr13I	GGNCC	5 cut(s)	249, 392, 400, 1708, 1949
Csp6I	GTAC	3 cut(s)	161, 1065, 1925
CviQI	GTAC	3 cut(s)	161, 1065, 1925
DdeI	CTNAG	5 cut(s)	1000, 1055, 1137, 1585, 1910
DpnI	GATC	7 cut(s)	75, 123, 204, 245, 525, 783, 1583
DpnII	GATC	7 cut(s)	73, 121, 202, 243, 523, 781, 1581
DraIII	CACNNNGTG	1 cut(s)	665
Eam1104I	CTCTTC	1 cut(s)	230
EarI	CTCTTC	1 cut(s)	230
Ecl136II	GAGCTC	1 cut(s)	9
Eco130I	CCWWGG	3 cut(s)	403, 894, 1958
Eco24I	GRGCYC	2 cut(s)	11, 799
Eco31I	GGTCTC	1 cut(s)	615
Eco47I	GGWCC	3 cut(s)	392, 400, 1708
Eco47III	AGCGCT	1 cut(s)	559
Eco53kI	GAGCTC	1 cut(s)	9
Eco88I	CYCGRG	1 cut(s)	1325
EcoICRI	GAGCTC	1 cut(s)	9
EcoO109I	RGGNCCY	3 cut(s)	249, 392, 1949
EcoRII	CCWGG	3 cut(s)	198, 1444, 1572
EcoT14I	CCWWGG	3 cut(s)	403, 894, 1958
EcoT22I	ATGCAT	2 cut(s)	23, 805
EcoT38I	GRGCYC	2 cut(s)	11, 799
ErhI	CCWWGG	3 cut(s)	403, 894, 1958
FaqI	GGGAC	2 cut(s)	859, 969
FauI	CCCGC	4 cut(s)	447, 643, 1231, 1960
FbaI	TGATCA	1 cut(s)	243
FblI	GTMKAC	4 cut(s)	51, 932, 1096, 1778
Fnu4HI	GCNGC	3 cut(s)	371, 514, 1409
FokI	GGATG	7 cut(s)	43, 590, 841, 925, 1556, 1596, 1805
FriOI	GRGCYC	2 cut(s)	11, 799
Fsp4HI	GCNGC	3 cut(s)	371, 514, 1409
FspBI	CTAG	9 cut(s)	47, 273, 675, 959, 1079, 1142, 1266, 1841, 2038
FspI	TGCGCA	1 cut(s)	369
GlaI	GCGC	2 cut(s)	369, 559
GluI	GCNGC	3 cut(s)	371, 514, 1409
GsaI	CCCAGC	2 cut(s)	1185, 1786
HaeII	RGCGCY	1 cut(s)	561
HaeIII	GGCC	3 cut(s)	251, 893, 1950
HapII	CCGG	1 cut(s)	135
HhaI	GCGC	2 cut(s)	370, 560
Hin6I	GCGC	2 cut(s)	368, 558
HinP1I	GCGC	2 cut(s)	368, 558
HincII	GTYRAC	2 cut(s)	1097, 1165
HindII	GTYRAC	2 cut(s)	1097, 1165
HindIII	AAGCTT	5 cut(s)	280, 681, 1382, 1439, 1625
HinfI	GANTC	8 cut(s)	53, 195, 300, 1106, 1336, 1376, 1566, 1847
HpaII	CCGG	1 cut(s)	135
HphI	GGTGA	7 cut(s)	220, 736, 835, 989, 1307, 1991, 2026
Hpy166II	GTNNAC	6 cut(s)	52, 933, 1097, 1165, 1591, 1779
Hpy188I	TCNGA	5 cut(s)	543, 1281, 1603, 1712, 1852
Hpy188III	TCNNGA	8 cut(s)	527, 989, 1308, 1481, 1646, 1804, 1919, 1934
Hpy8I	GTNNAC	6 cut(s)	52, 933, 1097, 1165, 1591, 1779
Hpy99I	CGWCG	1 cut(s)	1098
HpyCH4III	ACNGT	6 cut(s)	594, 835, 1069, 1343, 1744, 1972
HpyCH4IV	ACGT	2 cut(s)	935, 1404
HpyF10VI	GCNNNNNNNGC	7 cut(s)	155, 638, 647, 656, 1228, 1250, 1530
HpyF3I	CTNAG	5 cut(s)	1000, 1055, 1137, 1585, 1910
HpySE526I	ACGT	2 cut(s)	935, 1404
HspAI	GCGC	2 cut(s)	368, 558
Ksp22I	TGATCA	1 cut(s)	243
Kzo9I	GATC	7 cut(s)	73, 121, 202, 243, 523, 781, 1581
LmnI	GCTCC	3 cut(s)	490, 1263, 1490
Lsp1109I	GCAGC	1 cut(s)	382
LweI	GCATC	3 cut(s)	8, 693, 1527
MaeI	CTAG	9 cut(s)	47, 273, 675, 959, 1079, 1142, 1266, 1841, 2038
MaeII	ACGT	2 cut(s)	935, 1404
MaeIII	GTNAC	6 cut(s)	209, 314, 764, 835, 1036, 1400
MalI	GATC	7 cut(s)	75, 123, 204, 245, 525, 783, 1583
MboI	GATC	7 cut(s)	73, 121, 202, 243, 523, 781, 1581
MboII	GAAGA	4 cut(s)	217, 314, 1554, 1557
MfeI	CAATTG	1 cut(s)	39
MflI	RGATCY	2 cut(s)	73, 1581
MhlI	GDGCHC	3 cut(s)	11, 778, 799
MluCI	AATT	5 cut(s)	39, 175, 476, 1118, 1685
MlyI	GAGTC	4 cut(s)	47, 204, 1100, 1575
MmeI	TCCRAC	2 cut(s)	213, 1054
Mph1103I	ATGCAT	2 cut(s)	23, 805
MroXI	GAANNNNTTC	1 cut(s)	1020
MseI	TTAA	5 cut(s)	105, 345, 458, 1212, 1683
MslI	CAYNNNNRTG	4 cut(s)	899, 1223, 1239, 1485
MspI	CCGG	1 cut(s)	135
MspR9I	CCNGG	3 cut(s)	200, 1446, 1574
MunI	CAATTG	1 cut(s)	39
Mva1269I	GAATGC	2 cut(s)	373, 643
MvaI	CCWGG	3 cut(s)	200, 1446, 1574
MwoI	GCNNNNNNNGC	7 cut(s)	155, 638, 647, 656, 1228, 1250, 1530
NcoI	CCATGG	3 cut(s)	403, 894, 1958
NdeII	GATC	7 cut(s)	73, 121, 202, 243, 523, 781, 1581
NlaIV	GGNNCC	3 cut(s)	167, 1492, 1951
NmuCI	GTSAC	3 cut(s)	209, 764, 835
NsbI	TGCGCA	1 cut(s)	369
NsiI	ATGCAT	2 cut(s)	23, 805
NspI	RCATGY	2 cut(s)	865, 1222
PaeR7I	CTCGAG	1 cut(s)	1325
PagI	TCATGA	1 cut(s)	1480
PciI	ACATGT	1 cut(s)	861
PcsI	WCGNNNNNNNCGW	1 cut(s)	1183
PctI	GAATGC	2 cut(s)	373, 643
PdmI	GAANNNNTTC	1 cut(s)	1020
PfeI	GAWTC	4 cut(s)	300, 1336, 1376, 1847
Pfl23II	CGTACG	1 cut(s)	160
PflMI	CCANNNNNTGG	2 cut(s)	633, 1789
PfoI	TCCNGGA	2 cut(s)	198, 1572
PkrI	GCNGC	3 cut(s)	372, 515, 1410
PleI	GAGTC	4 cut(s)	47, 203, 1100, 1574
PpsI	GAGTC	4 cut(s)	47, 203, 1100, 1574
Ppu21I	YACGTR	1 cut(s)	936
PpuMI	RGGWCCY	1 cut(s)	392
PscI	ACATGT	1 cut(s)	861
Psp124BI	GAGCTC	1 cut(s)	11
Psp5II	RGGWCCY	1 cut(s)	392
Psp6I	CCWGG	3 cut(s)	198, 1444, 1572
PspFI	CCCAGC	2 cut(s)	1181, 1782
PspGI	CCWGG	3 cut(s)	198, 1444, 1572
PspLI	CGTACG	1 cut(s)	160
PspN4I	GGNNCC	3 cut(s)	167, 1492, 1951
PspPI	GGNCC	5 cut(s)	249, 392, 400, 1708, 1949
PspPPI	RGGWCCY	1 cut(s)	392
PspXI	VCTCGAGB	1 cut(s)	1325
PstNI	CAGNNNCTG	1 cut(s)	1521
PsuI	RGATCY	2 cut(s)	73, 1581
RsaI	GTAC	3 cut(s)	162, 1066, 1926
RsaNI	GTAC	3 cut(s)	161, 1065, 1925
RseI	CAYNNNNRTG	4 cut(s)	899, 1223, 1239, 1485
SacI	GAGCTC	1 cut(s)	11
SalI	GTCGAC	1 cut(s)	1095
SaqAI	TTAA	5 cut(s)	105, 345, 458, 1212, 1683
SatI	GCNGC	3 cut(s)	371, 514, 1409
Sau3AI	GATC	7 cut(s)	73, 121, 202, 243, 523, 781, 1581
Sau96I	GGNCC	5 cut(s)	249, 392, 400, 1708, 1949
SchI	GAGTC	4 cut(s)	47, 204, 1100, 1575
ScrFI	CCNGG	3 cut(s)	200, 1446, 1574
SduI	GDGCHC	3 cut(s)	11, 778, 799
SfaNI	GCATC	3 cut(s)	8, 693, 1527
SfcI	CTRYAG	3 cut(s)	1698, 1743, 1971
Sfr274I	CTCGAG	1 cut(s)	1325
SinI	GGWCC	3 cut(s)	392, 400, 1708
SlaI	CTCGAG	1 cut(s)	1325
SmiMI	CAYNNNNRTG	4 cut(s)	899, 1223, 1239, 1485
SmlI	CTYRAG	4 cut(s)	77, 989, 1325, 1646
SmoI	CTYRAG	4 cut(s)	77, 989, 1325, 1646
SpeI	ACTAGT	2 cut(s)	46, 1078
Sse9I	AATT	5 cut(s)	39, 175, 476, 1118, 1685
SsiI	CCGC	8 cut(s)	440, 473, 513, 650, 1238, 1373, 1408, 1953
SspI	AATATT	2 cut(s)	185, 462
SspMI	CTAG	9 cut(s)	47, 273, 675, 959, 1079, 1142, 1266, 1841, 2038
SstI	GAGCTC	1 cut(s)	11
StyD4I	CCNGG	3 cut(s)	198, 1444, 1572
StyI	CCWWGG	3 cut(s)	403, 894, 1958
TaaI	ACNGT	6 cut(s)	594, 835, 1069, 1343, 1744, 1972
TaiI	ACGT	2 cut(s)	938, 1407
TaqI	TCGA	8 cut(s)	325, 603, 1024, 1096, 1109, 1177, 1307, 1326
TaqII	GACCGA	1 cut(s)	388
TasI	AATT	5 cut(s)	39, 175, 476, 1118, 1685
TatI	WGTACW	2 cut(s)	1064, 1924
TauI	GCSGC	2 cut(s)	516, 1411
TfiI	GAWTC	4 cut(s)	300, 1336, 1376, 1847
Tru1I	TTAA	5 cut(s)	105, 345, 458, 1212, 1683
Tru9I	TTAA	5 cut(s)	105, 345, 458, 1212, 1683
TscAI	CASTG	4 cut(s)	783, 840, 858, 1904
TseFI	GTSAC	3 cut(s)	209, 764, 835
TseI	GCWGC	1 cut(s)	370
Tsp45I	GTSAC	3 cut(s)	209, 764, 835
TspGWI	ACGGA	1 cut(s)	178
TspRI	CASTG	4 cut(s)	783, 840, 858, 1904
Van91I	CCANNNNNTGG	2 cut(s)	633, 1789
VpaK11BI	GGWCC	3 cut(s)	392, 400, 1708
XapI	RAATTY	1 cut(s)	1685
XceI	RCATGY	2 cut(s)	865, 1222
XcmI	CCANNNNNNNNNTGG	1 cut(s)	196
XhoI	CTCGAG	1 cut(s)	1325
XmiI	GTMKAC	4 cut(s)	51, 932, 1096, 1778
XmnI	GAANNNNTTC	1 cut(s)	1020
XspI	CTAG	9 cut(s)	47, 273, 675, 959, 1079, 1142, 1266, 1841, 2038
Zsp2I	ATGCAT	2 cut(s)	23, 805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.