Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000463.1

Orthogroup ID

OG0006138

Physical Location & Seq

Genomic Coordinates Forward (+)

7913 .. 12155

Gene Structure 4243 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000463.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

atgatctcaactacagaaaaagaagaggaaaattcgctgctagaattttttgatcgagtttgggaggaagctttcaatagaagaagagaccatcaaggtcagccaccaagatcaataccgataaaattatacctgtttcgaggcaaggcacaagcccaactccacattatcatgatgagctctttgagatgcattgcaaaacacctgacaattgcactagtagactcatccaccactctcaaagatctcaagcaaatccacacccaactcctcattaacggtgttctcaacgatcctcgtctctccggcaactttgttgccaccattgccgtacggaaccccaacaatttggaatattccaaccgagtcctggatcaatgtgacaacccatctctcttcaccttcaactccatgatcagggcctattccaaaagttccacacctagtaaaagctttcacttttacagcagaatcctccattcaagtaacaatcttctacctgataactacacatttaacttcttggttcgcacttctgcgcagcattcgtcatttgagacaggtccttcggtccatggtgcattaataaagcatggatttgagaatgacccgcatggtcaaagtgctttaatatttatgtatgcggaattgggttgtttggagcaatgtcatagagtgtttagcggcattgccgatcctgatttggtgtgtcagactgctattgtgagcgcttgtgctaaatgtggggatgtagattatgcacggttattgttcgatgaaatgcctgaaagagaccccattgcttggaatgcgatgattgcggggtatgcacaatgtgggaagtctagggaagctttgggtttgttccatttgatgcaaatggagggtgtgagggtgaatgaggtgtgtatggtttcggtgttatcggcgtgttgtcacttgggggcactggatcaagggagatgggctcatgcatatatagagagaaacaaggtgaggatgacagtgacattggggactgcattgcttgacatgtatgcgaaatgtgggaatatgagtaaggccatggaagtgttttgggggatgaaggaaaagaatgtgtatacgtggagtgttgctttggggggactagctatgaatggctttggtgagaagtgtcttgagcttttctcagtcatggagaaagaaggcgttcgaccaaatgaagttacctttgtttcggttcttaggggttgtactgtggttggactagtggaggaaggtcgtagatattttgactcgatgaaagaattgtatgggattgaacctcagctagagcattatggttgcattgttgacttatatggtcgagctgggcgtttagatgaagctctgaacttcattaacaacatgccaatgaagcctcatgcgggtgcttggggggctttgctccacgctagtagaatgtatcggaatatggaactgggtgagcttgcgtcgagaaaaatagtagaactcgaggacaggaatcacggtgcttatgtgcttttgtccaatatatatgcggattccaagctttatgatggagtaagtaacgtgcggcaaaatatgaaggctaaaggtgtgatgaagcttcctggttgtagtgtcatagaagttgatggggaagttcatgaattgaaggtcatccaggaagggatcttagttcactctccttctgaaccacatccccccattgtgaagcttggtttgaaacaagttcttgagaaggttgatatatgtaataaagttgtaaggattaaattttgtgaagccgtagatatggtccgagctaccgatgtttctaatgatataattactgtagagggaacagctattatgacacagcgtaggtatacccagcctatggatgaagttctcttgaaggttgtgagcatatggggaaaagattttgctaggagaatctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

648

Amino Acids

72.83

Weight (kDa)

6.73

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006138)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40405 AT5G40405
fragaria_vesca	FvH4_4g32050
malus_domestica	MD13G1079400.v1.1 MD16G1079200.v1.1 MD16G1079300.v1.1
prunus_persica	Prupe.1G267400_v2.0.a1
pyrus_communis	pycom13g06910 pycom16g06850
rosa_chinensis	RchiOBHm_Chr1g0381771 RchiOBHm_Chr4g0440691 RchiOBHm_Chr4g0440711
rosa_laevigata	RLG00000006158 RLG00000008805 RLG00000026207
rosa_multiflora	Rmu_sc0000463.1_g000002 Rmu_sc0008418.1_g000010
rosa_roxburghii	Rroxscaffold_5G00381500 Rroxscaffold_7G00185760
rosa_rugosa	Rorug01G0430800 Rorug04G0327600
rosa_samantha	Rh1BG411600 Rh4AG379300 Rh4BG131000 Rh4BG392100
rosa_wichuraiana	Rw1G039640 Rw4G011000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	540
AccB7I	CCANNNNNTGG	2 cut(s)	804, 1885
AccI	GTMKAC	3 cut(s)	222, 1103, 1874
AciI	CCGC	7 cut(s)	611, 644, 684, 821, 1409, 1544, 1579
AclWI	GGATC	5 cut(s)	287, 381, 689, 960, 1685
AcsI	RAATTY	3 cut(s)	31, 44, 1781
AdeI	CACNNNGTG	1 cut(s)	836
AfaI	GTAC	2 cut(s)	333, 1237
AfeI	AGCGCT	1 cut(s)	730
AfiI	CCNNNNNNNGG	5 cut(s)	370, 417, 804, 1409, 1885
AflIII	ACRYGT	1 cut(s)	1032
AgsI	TTSAA	7 cut(s)	76, 406, 483, 1304, 1660, 1732, 1903
AhlI	ACTAGT	2 cut(s)	217, 1249
AjnI	CCWGG	3 cut(s)	369, 1615, 1668
Alw21I	GWGCWC	1 cut(s)	182
Alw26I	GTCTC	4 cut(s)	81, 305, 551, 786
AlwI	GGATC	5 cut(s)	287, 381, 689, 960, 1685
Ama87I	CYCGRG	1 cut(s)	1496
Aor51HI	AGCGCT	1 cut(s)	730
AoxI	GGCC	2 cut(s)	420, 1062
ApeKI	GCWGC	2 cut(s)	37, 541
ApoI	RAATTY	3 cut(s)	31, 44, 1781
ArsI	GACNNNNNNTTYG	2 cut(s)	550, 582
AseI	ATTAAT	1 cut(s)	584
Asp700I	GAANNNNTTC	1 cut(s)	1191
AspLEI	GCGC	2 cut(s)	541, 731
AspS9I	GGNCC	4 cut(s)	420, 563, 571, 1804
AsuHPI	GGTGA	5 cut(s)	391, 907, 1006, 1160, 1478
AvaI	CYCGRG	1 cut(s)	1496
AvaII	GGWCC	3 cut(s)	563, 571, 1804
BaeGI	GKGCMC	1 cut(s)	949
BanII	GRGCYC	2 cut(s)	182, 970
Bbv12I	GWGCWC	1 cut(s)	182
BbvCI	CCTCAGC	1 cut(s)	1308
BbvI	GCAGC	2 cut(s)	24, 553
BccI	CCATC	5 cut(s)	99, 397, 957, 1556, 1634
BceAI	ACGGC	2 cut(s)	314, 1778
BciT130I	CCWGG	3 cut(s)	371, 1617, 1670
BclI	TGATCA	1 cut(s)	414
BcoDI	GTCTC	4 cut(s)	81, 305, 551, 786
BcuI	ACTAGT	2 cut(s)	217, 1249
BfaI	CTAG	9 cut(s)	41, 218, 444, 846, 1130, 1250, 1313, 1437, 1935
BfmI	CTRYAG	2 cut(s)	12, 1839
BfoI	RGCGCY	1 cut(s)	732
BglII	AGATCT	1 cut(s)	244
BisI	GCNGC	4 cut(s)	38, 542, 685, 1580
BlsI	GCNGC	4 cut(s)	39, 543, 686, 1581
Bme1390I	CCNGG	3 cut(s)	371, 1617, 1670
Bme18I	GGWCC	3 cut(s)	563, 571, 1804
BmeT110I	CYCGRG	1 cut(s)	1496
BmgT120I	GGNCC	4 cut(s)	420, 563, 571, 1804
BmiI	GGNNCC	1 cut(s)	338
BmrFI	CCNGG	3 cut(s)	371, 1617, 1670
BmrI	ACTGGG	1 cut(s)	1472
BmsI	GCATC	2 cut(s)	179, 864
BmuI	ACTGGG	1 cut(s)	1472
BplI	GAGNNNNNCTC	4 cut(s)	952, 984, 1154, 1186
Bpu10I	CCTNAGC	1 cut(s)	1308
BpuEI	CTTGAG	3 cut(s)	233, 1181, 1763
BsaAI	YACGTR	1 cut(s)	1107
BsaI	GGTCTC	2 cut(s)	81, 786
BsaJI	CCNNGG	2 cut(s)	574, 1065
Bsc4I	CCNNNNNNNGG	5 cut(s)	370, 417, 804, 1409, 1885
Bse1I	ACTGG	2 cut(s)	954, 1467
Bse3DI	GCAATG	6 cut(s)	192, 324, 671, 687, 798, 1022
BseBI	CCWGG	3 cut(s)	371, 1617, 1670
BseDI	CCNNGG	2 cut(s)	574, 1065
BseGI	GGATG	7 cut(s)	227, 754, 1005, 1089, 1665, 1705, 1894
BseLI	CCNNNNNNNGG	5 cut(s)	370, 417, 804, 1409, 1885
BseMI	GCAATG	6 cut(s)	192, 324, 671, 687, 798, 1022
BseMII	CTCAG	2 cut(s)	1185, 1322
BseNI	ACTGG	2 cut(s)	954, 1467
BseRI	GAGGAG	1 cut(s)	260
BseSI	GKGCMC	1 cut(s)	949
BseXI	GCAGC	2 cut(s)	24, 553
BseYI	CCCAGC	2 cut(s)	1352, 1878
BshFI	GGCC	2 cut(s)	422, 1064
BsiHKAI	GWGCWC	1 cut(s)	182
BsiHKCI	CYCGRG	1 cut(s)	1496
BsiSI	CCGG	1 cut(s)	306
BsiWI	CGTACG	1 cut(s)	331
BslFI	GGGAC	2 cut(s)	1030, 1140
BslI	CCNNNNNNNGG	5 cut(s)	370, 417, 804, 1409, 1885
BsmAI	GTCTC	4 cut(s)	81, 305, 551, 786
BsmBI	CGTCTC	1 cut(s)	305
BsmFI	GGGAC	2 cut(s)	1030, 1140
BsmI	GAATGC	2 cut(s)	544, 814
BsnI	GGCC	2 cut(s)	422, 1064
Bso31I	GGTCTC	2 cut(s)	81, 786
BsoBI	CYCGRG	1 cut(s)	1496
Bsp1286I	GDGCHC	3 cut(s)	182, 949, 970
Bsp19I	CCATGG	2 cut(s)	574, 1065
BspACI	CCGC	7 cut(s)	611, 644, 684, 821, 1409, 1544, 1579
BspANI	GGCC	2 cut(s)	422, 1064
BspCNI	CTCAG	2 cut(s)	1184, 1321
BspHI	TCATGA	2 cut(s)	171, 1651
BspLI	GGNNCC	1 cut(s)	338
BspPI	GGATC	5 cut(s)	287, 381, 689, 960, 1685
BspTNI	GGTCTC	2 cut(s)	81, 786
BsrDI	GCAATG	6 cut(s)	192, 324, 671, 687, 798, 1022
BsrI	ACTGG	2 cut(s)	954, 1467
BssECI	CCNNGG	2 cut(s)	574, 1065
BssNAI	GTATAC	2 cut(s)	1104, 1875
BssT1I	CCWWGG	2 cut(s)	574, 1065
Bst1107I	GTATAC	2 cut(s)	1104, 1875
Bst2UI	CCWGG	3 cut(s)	371, 1617, 1670
Bst4CI	ACNGT	6 cut(s)	281, 765, 1006, 1240, 1514, 1840
Bst6I	CTCTTC	3 cut(s)	18, 79, 401
BstBAI	YACGTR	1 cut(s)	1107
BstC8I	GCNNGC	1 cut(s)	1473
BstDEI	CTNAG	4 cut(s)	1171, 1226, 1308, 1681
BstDSI	CCRYGG	2 cut(s)	574, 1065
BstF5I	GGATG	7 cut(s)	227, 754, 1005, 1089, 1665, 1705, 1894
BstH2I	RGCGCY	1 cut(s)	732
BstHHI	GCGC	2 cut(s)	541, 731
BstMAI	GTCTC	4 cut(s)	81, 305, 551, 786
BstMWI	GCNNNNNNNGC	6 cut(s)	326, 809, 818, 827, 1399, 1421
BstNI	CCWGG	3 cut(s)	371, 1617, 1670
BstNSI	RCATGY	2 cut(s)	1036, 1393
BstSCI	CCNGG	3 cut(s)	369, 1615, 1668
BstSFI	CTRYAG	2 cut(s)	12, 1839
BstSLI	GKGCMC	1 cut(s)	949
BstV1I	GCAGC	2 cut(s)	24, 553
BstX2I	RGATCY	2 cut(s)	244, 1677
BstXI	CCANNNNNNTGG	1 cut(s)	349
BstYI	RGATCY	2 cut(s)	244, 1677
BstZ17I	GTATAC	2 cut(s)	1104, 1875
BsuRI	GGCC	2 cut(s)	422, 1064
BtgI	CCRYGG	2 cut(s)	574, 1065
BtgZI	GCGATG	1 cut(s)	827
BtsCI	GGATG	7 cut(s)	227, 754, 1005, 1089, 1665, 1705, 1894
BtsIMutI	CAGTG	2 cut(s)	947, 1011
Cac8I	GCNNGC	1 cut(s)	1473
CciI	TCATGA	2 cut(s)	171, 1651
CfoI	GCGC	2 cut(s)	541, 731
Cfr13I	GGNCC	4 cut(s)	420, 563, 571, 1804
CseI	GACGC	1 cut(s)	1464
Csp6I	GTAC	2 cut(s)	332, 1236
CviQI	GTAC	2 cut(s)	332, 1236
DdeI	CTNAG	4 cut(s)	1171, 1226, 1308, 1681
DraIII	CACNNNGTG	1 cut(s)	836
Eam1104I	CTCTTC	3 cut(s)	18, 79, 401
EarI	CTCTTC	3 cut(s)	18, 79, 401
Ecl136II	GAGCTC	1 cut(s)	180
Eco130I	CCWWGG	2 cut(s)	574, 1065
Eco24I	GRGCYC	2 cut(s)	182, 970
Eco31I	GGTCTC	2 cut(s)	81, 786
Eco47I	GGWCC	3 cut(s)	563, 571, 1804
Eco47III	AGCGCT	1 cut(s)	730
Eco53kI	GAGCTC	1 cut(s)	180
Eco88I	CYCGRG	1 cut(s)	1496
EcoICRI	GAGCTC	1 cut(s)	180
EcoO109I	RGGNCCY	2 cut(s)	420, 563
EcoRII	CCWGG	3 cut(s)	369, 1615, 1668
EcoT14I	CCWWGG	2 cut(s)	574, 1065
EcoT22I	ATGCAT	2 cut(s)	194, 976
EcoT38I	GRGCYC	2 cut(s)	182, 970
ErhI	CCWWGG	2 cut(s)	574, 1065
Esp3I	CGTCTC	1 cut(s)	305
FaqI	GGGAC	2 cut(s)	1030, 1140
FauI	CCCGC	3 cut(s)	618, 814, 1402
FauNDI	CATATG	1 cut(s)	1916
FbaI	TGATCA	1 cut(s)	414
FblI	GTMKAC	3 cut(s)	222, 1103, 1874
Fnu4HI	GCNGC	4 cut(s)	38, 542, 685, 1580
FokI	GGATG	7 cut(s)	214, 761, 1012, 1096, 1652, 1692, 1901
FriOI	GRGCYC	2 cut(s)	182, 970
Fsp4HI	GCNGC	4 cut(s)	38, 542, 685, 1580
FspBI	CTAG	9 cut(s)	41, 218, 444, 846, 1130, 1250, 1313, 1437, 1935
FspI	TGCGCA	1 cut(s)	540
GlaI	GCGC	2 cut(s)	540, 730
GluI	GCNGC	4 cut(s)	38, 542, 685, 1580
GsaI	CCCAGC	2 cut(s)	1356, 1882
HaeII	RGCGCY	1 cut(s)	732
HaeIII	GGCC	2 cut(s)	422, 1064
HapII	CCGG	1 cut(s)	306
HgaI	GACGC	1 cut(s)	1464
HhaI	GCGC	2 cut(s)	541, 731
Hin6I	GCGC	2 cut(s)	539, 729
HinP1I	GCGC	2 cut(s)	539, 729
HincII	GTYRAC	1 cut(s)	1336
HindII	GTYRAC	1 cut(s)	1336
HindIII	AAGCTT	6 cut(s)	69, 451, 852, 1553, 1610, 1721
HinfI	GANTC	7 cut(s)	224, 366, 471, 1277, 1507, 1547, 1941
HpaII	CCGG	1 cut(s)	306
HphI	GGTGA	5 cut(s)	391, 907, 1006, 1160, 1478
Hpy166II	GTNNAC	5 cut(s)	223, 1104, 1336, 1687, 1875
Hpy188I	TCNGA	6 cut(s)	714, 1374, 1452, 1699, 1808, 1946
Hpy188III	TCNNGA	7 cut(s)	172, 698, 1160, 1479, 1652, 1742, 1900
Hpy8I	GTNNAC	5 cut(s)	223, 1104, 1336, 1687, 1875
Hpy99I	CGWCG	1 cut(s)	1480
HpyCH4III	ACNGT	6 cut(s)	281, 765, 1006, 1240, 1514, 1840
HpyCH4IV	ACGT	2 cut(s)	1106, 1575
HpyF10VI	GCNNNNNNNGC	6 cut(s)	326, 809, 818, 827, 1399, 1421
HpyF3I	CTNAG	4 cut(s)	1171, 1226, 1308, 1681
HpySE526I	ACGT	2 cut(s)	1106, 1575
HspAI	GCGC	2 cut(s)	539, 729
Ksp22I	TGATCA	1 cut(s)	414
LmnI	GCTCC	2 cut(s)	661, 1434
Lsp1109I	GCAGC	2 cut(s)	24, 553
LweI	GCATC	2 cut(s)	179, 864
MaeI	CTAG	9 cut(s)	41, 218, 444, 846, 1130, 1250, 1313, 1437, 1935
MaeII	ACGT	2 cut(s)	1106, 1575
MaeIII	GTNAC	6 cut(s)	380, 485, 935, 1006, 1207, 1571
MboII	GAAGA	5 cut(s)	35, 93, 96, 388, 485
MfeI	CAATTG	1 cut(s)	210
MflI	RGATCY	2 cut(s)	244, 1677
MhlI	GDGCHC	3 cut(s)	182, 949, 970
MlyI	GAGTC	3 cut(s)	218, 375, 1271
MmeI	TCCRAC	2 cut(s)	384, 1225
Mph1103I	ATGCAT	2 cut(s)	194, 976
MroXI	GAANNNNTTC	1 cut(s)	1191
MseI	TTAA	6 cut(s)	276, 516, 584, 629, 1383, 1779
MslI	CAYNNNNRTG	4 cut(s)	170, 1070, 1394, 1410
MspI	CCGG	1 cut(s)	306
MspR9I	CCNGG	3 cut(s)	371, 1617, 1670
MunI	CAATTG	1 cut(s)	210
Mva1269I	GAATGC	2 cut(s)	544, 814
MvaI	CCWGG	3 cut(s)	371, 1617, 1670
MwoI	GCNNNNNNNGC	6 cut(s)	326, 809, 818, 827, 1399, 1421
NcoI	CCATGG	2 cut(s)	574, 1065
NdeI	CATATG	1 cut(s)	1916
NlaIV	GGNNCC	1 cut(s)	338
NmuCI	GTSAC	3 cut(s)	380, 935, 1006
NsbI	TGCGCA	1 cut(s)	540
NsiI	ATGCAT	2 cut(s)	194, 976
NspI	RCATGY	2 cut(s)	1036, 1393
PaeR7I	CTCGAG	1 cut(s)	1496
PagI	TCATGA	2 cut(s)	171, 1651
PciI	ACATGT	1 cut(s)	1032
PcsI	WCGNNNNNNNCGW	1 cut(s)	1354
PctI	GAATGC	2 cut(s)	544, 814
PdmI	GAANNNNTTC	1 cut(s)	1191
PfeI	GAWTC	4 cut(s)	471, 1507, 1547, 1941
Pfl23II	CGTACG	1 cut(s)	331
PflMI	CCANNNNNTGG	2 cut(s)	804, 1885
PfoI	TCCNGGA	2 cut(s)	369, 1668
PkrI	GCNGC	4 cut(s)	39, 543, 686, 1581
PleI	GAGTC	3 cut(s)	218, 374, 1271
PpsI	GAGTC	3 cut(s)	218, 374, 1271
Ppu21I	YACGTR	1 cut(s)	1107
PpuMI	RGGWCCY	1 cut(s)	563
PscI	ACATGT	1 cut(s)	1032
PshBI	ATTAAT	1 cut(s)	584
Psp124BI	GAGCTC	1 cut(s)	182
Psp5II	RGGWCCY	1 cut(s)	563
Psp6I	CCWGG	3 cut(s)	369, 1615, 1668
PspFI	CCCAGC	2 cut(s)	1352, 1878
PspGI	CCWGG	3 cut(s)	369, 1615, 1668
PspLI	CGTACG	1 cut(s)	331
PspN4I	GGNNCC	1 cut(s)	338
PspPI	GGNCC	4 cut(s)	420, 563, 571, 1804
PspPPI	RGGWCCY	1 cut(s)	563
PspXI	VCTCGAGB	1 cut(s)	1496
PsuI	RGATCY	2 cut(s)	244, 1677
RsaI	GTAC	2 cut(s)	333, 1237
RsaNI	GTAC	2 cut(s)	332, 1236
RseI	CAYNNNNRTG	4 cut(s)	170, 1070, 1394, 1410
SacI	GAGCTC	1 cut(s)	182
SaqAI	TTAA	6 cut(s)	276, 516, 584, 629, 1383, 1779
SatI	GCNGC	4 cut(s)	38, 542, 685, 1580
Sau96I	GGNCC	4 cut(s)	420, 563, 571, 1804
SchI	GAGTC	3 cut(s)	218, 375, 1271
ScrFI	CCNGG	3 cut(s)	371, 1617, 1670
SduI	GDGCHC	3 cut(s)	182, 949, 970
SfaNI	GCATC	2 cut(s)	179, 864
SfcI	CTRYAG	2 cut(s)	12, 1839
Sfr274I	CTCGAG	1 cut(s)	1496
SinI	GGWCC	3 cut(s)	563, 571, 1804
SlaI	CTCGAG	1 cut(s)	1496
SmiMI	CAYNNNNRTG	4 cut(s)	170, 1070, 1394, 1410
SmlI	CTYRAG	4 cut(s)	248, 1160, 1496, 1742
SmoI	CTYRAG	4 cut(s)	248, 1160, 1496, 1742
SpeI	ACTAGT	2 cut(s)	217, 1249
SsiI	CCGC	7 cut(s)	611, 644, 684, 821, 1409, 1544, 1579
SspI	AATATT	2 cut(s)	356, 633
SspMI	CTAG	9 cut(s)	41, 218, 444, 846, 1130, 1250, 1313, 1437, 1935
SstI	GAGCTC	1 cut(s)	182
StyD4I	CCNGG	3 cut(s)	369, 1615, 1668
StyI	CCWWGG	2 cut(s)	574, 1065
TaaI	ACNGT	6 cut(s)	281, 765, 1006, 1240, 1514, 1840
TaiI	ACGT	2 cut(s)	1109, 1578
TaqI	TCGA	8 cut(s)	55, 139, 774, 1195, 1280, 1348, 1478, 1497
TaqII	GACCGA	1 cut(s)	559
TatI	WGTACW	1 cut(s)	1235
TauI	GCSGC	2 cut(s)	687, 1582
TfiI	GAWTC	4 cut(s)	471, 1507, 1547, 1941
Tru1I	TTAA	6 cut(s)	276, 516, 584, 629, 1383, 1779
Tru9I	TTAA	6 cut(s)	276, 516, 584, 629, 1383, 1779
TscAI	CASTG	2 cut(s)	954, 1011
TseFI	GTSAC	3 cut(s)	380, 935, 1006
TseI	GCWGC	2 cut(s)	37, 541
Tsp45I	GTSAC	3 cut(s)	380, 935, 1006
TspGWI	ACGGA	1 cut(s)	349
TspRI	CASTG	2 cut(s)	954, 1011
Van91I	CCANNNNNTGG	2 cut(s)	804, 1885
VpaK11BI	GGWCC	3 cut(s)	563, 571, 1804
VspI	ATTAAT	1 cut(s)	584
XapI	RAATTY	3 cut(s)	31, 44, 1781
XceI	RCATGY	2 cut(s)	1036, 1393
XcmI	CCANNNNNNNNNTGG	1 cut(s)	367
XhoI	CTCGAG	1 cut(s)	1496
XmiI	GTMKAC	3 cut(s)	222, 1103, 1874
XmnI	GAANNNNTTC	1 cut(s)	1191
XspI	CTAG	9 cut(s)	41, 218, 444, 846, 1130, 1250, 1313, 1437, 1935
Zsp2I	ATGCAT	2 cut(s)	194, 976

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.