RchiOBHm_Chr2g0093881

U-box domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
7015360 .. 7019454
4095 bp
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UTR
Exon/CDS
Intron
PRQ46891

Sequence Viewer

Length: 2334 bp
ATGACGTCAGTGGCGGTGGCGGTCAACGGCGGCGACGGAAACGGAAGCCGACGCGCCGTGAAGTGGGCGGTGGAGAATCTCATGCCCACAGCCGATCGCTTCGTATTGGTCCACGTCATGCCCAGAATCACTTCAATTCCAACCCCATCAGGAGATCGCATCCCGGTGACGGAGCTAGATGAGGGTGTGGTGGCGACGTACGTGAATGACATGAAGGACAAGTACGAGGAGGTTTTCACTCCGTTAAAGAAGCTATGCAAGTCAAAGAAGGTTGAAACATTGGTGTTGGAGGATGAGGTTCCTGCAAATGGGATTCTAAGCTTTATATCTCAGTCTGATATCAATTGTTTAGTTTTGGGCTCTAGCAATTCTAATTACATAACCAGGAAACTGAAGGGACCTGACGTACCGACAGTTGTTCTGAAATGTGCTCCCGAGAGTTGTGATATTCATGTCGTTTCGAAACAAAGAGTTATCACAAAATCAGCTAGTCTCTCGTCTGCTTGTGAGTCTAGTACTGCTAACGGGCTGTCTACTCGAGGAGAAGACGGGGGGTTTTCCAGAGATATTAATGAAGGGATAACTGGAAGTCGTTCTTCCTACCTAGTATCCACAGTTAATGAAGGTTATGGAGCACCGTCCATGTCAGATCTTAGTTATATAAGTTCTGAAGCATTTACACGTATGAAGTTTCCTGCAAATGCTAGTGTGGATCAGGAAAGGAATCATCAGAACTTGGAAGAGAACCTTGAGATTATTTCTTTCCAGCGTGGAAGTTCCTCAATTTCTTCAAACATTGAGCAGATTGAAGTGGAAAAGTTGCGTGCAGAATTGCAAAATACTCTTGGCATGTACAAACGAGCTTGTGAAGAGCTGGTACATGCCCAAAGCAAGGTCCAACTACTTTCTTCCGAATGCCTTGAAGAAGCAAGAAGAGTGAATGCTGCTCTTGAGAGTGAGGAAACTTTGAGAAAAATTGCTGCTGAAGAGGCAGCAAAGCATTTTAAGGCCAGGAAAGAGATTGAGGAGGCAAAAGTTCTGCTTGCTAAAGAGGCTTATGAGAGGCAAGTTGCTGAATTAAATGCCCTGAAAGAGTCGACAGGGAAAAAGGAATTTGTTGATGCACTCTTCTCATGTGACAATAGGTACAGGAGATACAGTAGGAAGGAAATAGAGATAGCAACAAACTTCTTCTCAGAGACTAATGTGATTGGTGAAGGAGGATATGGGAAAGTTTACAAGTGCAGTCTTGATCAAACCCCGGTAGCTGTTAAGGTTCTTCGACCTGATGCAGTTGAGAAGAAGGAGGAGTTTCTGAAAGAGGTTGAAATTCTTAGTCAGCTACATCATCCTAACATAGTTTTGCTTCTTGGAGCCTGTCCAGAGATCGGTTGCCTGGTCTATGAATACCTGGAAAATGGGAACTTGGAAGATTATATCTCCCACCGCCAGAATGGAAAACCATCTCTCCCTTGGACTGTTAGGTTCAGGATAATTTTTGAAATAGCGTGTGGGCTTGCATTCTTACACAACTCAAAGACAGACCCTATTGTGCATCGAGATCTAAAACCAGGTAATGTCTTACTGGACAGAAACTACTCGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTACAGACATCGTGCCTGACAACATAACGGAGTACAGAGAATCAATTATTGCTGGTACACTCTTTTACATGGATCCAGAGTATCAGAGAACCGGCACAATTAGACCCAAATCAGATTTGTATGCTTTTGGGGTCATTATCCTCCAAGTATTGACAGCGCGACATCCAAATAGGCTTATATACATTGTGGAAAATGCAATTGCAAATGGTTCTTTTGCCGACTTTTTAGATGAGTCAGTCACAGATTGGCCACTAGATGAAACAGAGGAGTTGGCTCAACTTGCATTAAGGTGTTCAAAGCTTAGATGCAGGGATAGACCGGATCTTGAAACTGAAGTTCTGCCAGTTCTCAAAAGACTCGTTGATATTGCAGATCCTACTTCTAAGATTGAGAGAAACCATATTGATGCACCAAGCCACTACTATTGTCCAATACTTCAGGAAATCATGGACGACCCACACATTTCTGCCGATGGCTTTACTTATGAGTACAGAGCAATCAAAGCATGGCTTGACAAACACAATGTATCCCCAGTGACGAGGCTTAGACTTCAGCATTCAGAGTTGATTCCTAACCATACATTGCGTTCAGCTATACAAGAATGGAGGTCACACGTGACATACTCTTCTGCCTTAGTGGATAGACGAGTGAATCGCACGAGTTCTTGCAAGCTCTCCAAAGCAGAAAGTACATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

777

Amino Acids

87.06

Weight (kDa)

5.72

Isoelectric Point (pI)

48.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 399 - 653 2.3e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 401 - 655 3.8e-41 Protein tyrosine and serine/threonine kinase
U-box PF04564 682 - 749 1.5e-17 U-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 8
AccI GTMKAC 2 cut(s) 533, 1097
AccII CGCG 2 cut(s) 54, 1795
AciI CCGC 5 cut(s) 14, 20, 30, 68, 1447
AclWI GGATC 5 cut(s) 720, 1703, 1716, 1965, 2003
AcoI YGGCCR 1 cut(s) 1883
AcsI RAATTY 2 cut(s) 1112, 1329
AcuI CTGAAG 6 cut(s) 413, 690, 1005, 1989, 2057, 2171
AcvI CACGTG 1 cut(s) 2251
AcyI GRCGYC 1 cut(s) 5
AfiI CCNNNNNNNGG 5 cut(s) 63, 169, 308, 892, 1388
AflIII ACRYGT 2 cut(s) 680, 2248
AgsI TTSAA 9 cut(s) 135, 275, 792, 809, 923, 1328, 1502, 1932, 1964
AjiI CACGTC 1 cut(s) 115
AjnI CCWGG 5 cut(s) 383, 1010, 1395, 1410, 1570
Alw21I GWGCWC 2 cut(s) 433, 637
Alw26I GTCTC 2 cut(s) 497, 1193
AlwI GGATC 5 cut(s) 720, 1703, 1716, 1965, 2003
Ama87I CYCGRG 3 cut(s) 434, 537, 1600
AoxI GGCC 2 cut(s) 1008, 1883
ApeKI GCWGC 3 cut(s) 944, 980, 992
ApoI RAATTY 2 cut(s) 1112, 1329
AseI ATTAAT 1 cut(s) 570
Asp700I GAANNNNTTC 2 cut(s) 130, 592
AspLEI GCGC 2 cut(s) 56, 1795
AspS9I GGNCC 3 cut(s) 109, 398, 895
AsuC2I CCSGG 2 cut(s) 164, 1262
AsuHPI GGTGA 2 cut(s) 178, 1226
AsuII TTCGAA 1 cut(s) 461
AvaI CYCGRG 3 cut(s) 434, 537, 1600
AvaII GGWCC 3 cut(s) 109, 398, 895
BalI TGGCCA 1 cut(s) 1885
BamHI GGATCC 1 cut(s) 1708
BanII GRGCYC 1 cut(s) 362
BarI GAAGNNNNNNTAC 4 cut(s) 206, 238, 861, 893
BauI CACGAG 1 cut(s) 2293
BbrPI CACGTG 1 cut(s) 2251
BbsI GAAGAC 1 cut(s) 552
Bbv12I GWGCWC 2 cut(s) 433, 637
BbvI GCAGC 3 cut(s) 931, 967, 1004
BccI CCATC 3 cut(s) 154, 1471, 2102
BceAI ACGGC 2 cut(s) 41, 43
BciT130I CCWGG 5 cut(s) 385, 1012, 1397, 1412, 1572
BciVI GTATCC 2 cut(s) 619, 2173
BclI TGATCA 1 cut(s) 1252
BcnI CCSGG 2 cut(s) 164, 1262
BcoDI GTCTC 2 cut(s) 497, 1193
BfaI CTAG 7 cut(s) 176, 363, 489, 513, 605, 705, 1889
BfuI GTATCC 2 cut(s) 619, 2173
BglII AGATCT 2 cut(s) 649, 1561
BisI GCNGC 4 cut(s) 31, 945, 981, 993
BlsI GCNGC 4 cut(s) 32, 946, 982, 994
BmcAI AGTACT 1 cut(s) 517
Bme1390I CCNGG 7 cut(s) 164, 385, 1012, 1262, 1397, 1412, 1572
Bme18I GGWCC 3 cut(s) 109, 398, 895
BmeT110I CYCGRG 3 cut(s) 434, 537, 1600
BmgBI CACGTC 1 cut(s) 115
BmgT120I GGNCC 3 cut(s) 109, 398, 895
BmiI GGNNCC 4 cut(s) 300, 399, 1375, 1710
BmrFI CCNGG 7 cut(s) 164, 385, 1012, 1262, 1397, 1412, 1572
BmrI ACTGGG 1 cut(s) 2162
BmsI GCATC 6 cut(s) 168, 1111, 1279, 1564, 1931, 2032
BmuI ACTGGG 1 cut(s) 2162
BpiI GAAGAC 1 cut(s) 552
Bpu14I TTCGAA 1 cut(s) 461
BpuEI CTTGAG 2 cut(s) 770, 971
BpuMI CCSGG 2 cut(s) 164, 1262
BsaAI YACGTR 3 cut(s) 202, 683, 2251
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 1260, 1472
BsaWI WCCGGW 1 cut(s) 1954
BsaXI ACNNNNNCTCC 4 cut(s) 1144, 1174, 1452, 1482
Bsc4I CCNNNNNNNGG 5 cut(s) 63, 169, 308, 892, 1388
Bse118I RCCGGY 1 cut(s) 1727
Bse1I ACTGG 4 cut(s) 589, 1590, 1979, 2168
Bse3DI GCAATG 1 cut(s) 2216
BseBI CCWGG 5 cut(s) 385, 1012, 1397, 1412, 1572
BseDI CCNNGG 2 cut(s) 1260, 1472
BseGI GGATG 5 cut(s) 159, 298, 1348, 1621, 1798
BseLI CCNNNNNNNGG 5 cut(s) 63, 169, 308, 892, 1388
BseMI GCAATG 1 cut(s) 2216
BseMII CTCAG 2 cut(s) 344, 1209
BseNI ACTGG 4 cut(s) 589, 1590, 1979, 2168
BseRI GAGGAG 5 cut(s) 242, 555, 1040, 1322, 1916
BseXI GCAGC 3 cut(s) 931, 967, 1004
BsgI GTGCAG 2 cut(s) 846, 1264
Bsh1236I CGCG 2 cut(s) 54, 1795
Bsh1285I CGRYCG 1 cut(s) 97
BshFI GGCC 2 cut(s) 1010, 1885
BsiEI CGRYCG 1 cut(s) 97
BsiHKAI GWGCWC 2 cut(s) 433, 637
BsiHKCI CYCGRG 3 cut(s) 434, 537, 1600
BsiSI CCGG 4 cut(s) 164, 1262, 1728, 1955
BsiWI CGTACG 1 cut(s) 198
BslFI GGGAC 1 cut(s) 411
BslI CCNNNNNNNGG 5 cut(s) 63, 169, 308, 892, 1388
BsmAI GTCTC 2 cut(s) 497, 1193
BsmFI GGGAC 1 cut(s) 411
BsmI GAATGC 4 cut(s) 920, 946, 1520, 2191
BsnI GGCC 2 cut(s) 1010, 1885
BsoBI CYCGRG 3 cut(s) 434, 537, 1600
Bsp119I TTCGAA 1 cut(s) 461
Bsp1286I GDGCHC 3 cut(s) 362, 433, 637
Bsp1407I TGTACA 1 cut(s) 852
BspACI CCGC 5 cut(s) 14, 20, 30, 68, 1447
BspANI GGCC 2 cut(s) 1010, 1885
BspCNI CTCAG 2 cut(s) 343, 1208
BspFNI CGCG 2 cut(s) 54, 1795
BspLI GGNNCC 4 cut(s) 300, 399, 1375, 1710
BspPI GGATC 5 cut(s) 720, 1703, 1716, 1965, 2003
BspQI GCTCTTC 1 cut(s) 864
BspT104I TTCGAA 1 cut(s) 461
BsrDI GCAATG 1 cut(s) 2216
BsrFI RCCGGY 1 cut(s) 1727
BsrGI TGTACA 1 cut(s) 852
BsrI ACTGG 4 cut(s) 589, 1590, 1979, 2168
BssAI RCCGGY 1 cut(s) 1727
BssECI CCNNGG 2 cut(s) 1260, 1472
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 2293
BssT1I CCWWGG 1 cut(s) 1472
Bst2BI CACGAG 1 cut(s) 2293
Bst2UI CCWGG 5 cut(s) 385, 1012, 1397, 1412, 1572
Bst4CI ACNGT 5 cut(s) 415, 616, 639, 1160, 1480
Bst6I CTCTTC 6 cut(s) 735, 864, 928, 981, 1133, 2266
BstACI GRCGYC 1 cut(s) 5
BstAUI TGTACA 1 cut(s) 852
BstBAI YACGTR 3 cut(s) 202, 683, 2251
BstBI TTCGAA 1 cut(s) 461
BstC8I GCNNGC 5 cut(s) 825, 1044, 1518, 1626, 2306
BstDEI CTNAG 9 cut(s) 317, 330, 653, 1195, 1334, 1937, 2019, 2180, 2269
BstF5I GGATG 5 cut(s) 159, 298, 1348, 1621, 1798
BstFNI CGCG 2 cut(s) 54, 1795
BstHHI GCGC 2 cut(s) 56, 1795
BstMAI GTCTC 2 cut(s) 497, 1193
BstMCI CGRYCG 1 cut(s) 97
BstMWI GCNNNNNNNGC 4 cut(s) 989, 1052, 1916, 2138
BstNI CCWGG 5 cut(s) 385, 1012, 1397, 1412, 1572
BstNSI RCATGY 2 cut(s) 853, 884
BstSCI CCNGG 7 cut(s) 162, 383, 1010, 1260, 1395, 1410, 1570
BstUI CGCG 2 cut(s) 54, 1795
BstV1I GCAGC 3 cut(s) 931, 967, 1004
BstV2I GAAGAC 1 cut(s) 552
BstX2I RGATCY 5 cut(s) 649, 1561, 1708, 1957, 2008
BstYI RGATCY 5 cut(s) 649, 1561, 1708, 1957, 2008
BsuI GTATCC 2 cut(s) 619, 2173
BsuRI GGCC 2 cut(s) 1010, 1885
BtrI CACGTC 1 cut(s) 115
BtsCI GGATG 5 cut(s) 159, 298, 1348, 1621, 1798
BtsIMutI CAGTG 2 cut(s) 15, 2175
Cac8I GCNNGC 5 cut(s) 825, 1044, 1518, 1626, 2306
CfoI GCGC 2 cut(s) 56, 1795
Cfr10I RCCGGY 1 cut(s) 1727
Cfr13I GGNCC 3 cut(s) 109, 398, 895
CseI GACGC 1 cut(s) 60
CsiI ACCWGGT 1 cut(s) 1570
CspCI CAANNNNNGTGG 2 cut(s) 2042, 2077
DdeI CTNAG 9 cut(s) 317, 330, 653, 1195, 1334, 1937, 2019, 2180, 2269
EaeI YGGCCR 1 cut(s) 1883
Eam1104I CTCTTC 6 cut(s) 735, 864, 928, 981, 1133, 2266
EarI CTCTTC 6 cut(s) 735, 864, 928, 981, 1133, 2266
Eco130I CCWWGG 1 cut(s) 1472
Eco24I GRGCYC 1 cut(s) 362
Eco32I GATATC 1 cut(s) 340
Eco47I GGWCC 3 cut(s) 109, 398, 895
Eco57I CTGAAG 6 cut(s) 413, 690, 1005, 1989, 2057, 2171
Eco72I CACGTG 1 cut(s) 2251
Eco88I CYCGRG 3 cut(s) 434, 537, 1600
EcoO109I RGGNCCY 1 cut(s) 398
EcoRII CCWGG 5 cut(s) 383, 1010, 1395, 1410, 1570
EcoRV GATATC 1 cut(s) 340
EcoT14I CCWWGG 1 cut(s) 1472
EcoT38I GRGCYC 1 cut(s) 362
ErhI CCWWGG 1 cut(s) 1472
FalI AAGNNNNNCTT 8 cut(s) 580, 612, 732, 764, 1026, 1058, 2130, 2162
FaqI GGGAC 1 cut(s) 411
FbaI TGATCA 1 cut(s) 1252
FblI GTMKAC 2 cut(s) 533, 1097
Fnu4HI GCNGC 4 cut(s) 31, 945, 981, 993
FokI GGATG 5 cut(s) 146, 305, 1335, 1628, 1785
FriOI GRGCYC 1 cut(s) 362
Fsp4HI GCNGC 4 cut(s) 31, 945, 981, 993
FspBI CTAG 7 cut(s) 176, 363, 489, 513, 605, 705, 1889
GlaI GCGC 2 cut(s) 55, 1794
GluI GCNGC 4 cut(s) 31, 945, 981, 993
HaeIII GGCC 2 cut(s) 1010, 1885
HapII CCGG 4 cut(s) 164, 1262, 1728, 1955
HgaI GACGC 1 cut(s) 60
HhaI GCGC 2 cut(s) 56, 1795
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 2 cut(s) 54, 1793
HinP1I GCGC 2 cut(s) 54, 1793
HincII GTYRAC 2 cut(s) 25, 1098
HindII GTYRAC 2 cut(s) 25, 1098
HindIII AAGCTT 2 cut(s) 319, 1934
HpaII CCGG 4 cut(s) 164, 1262, 1728, 1955
HphI GGTGA 2 cut(s) 178, 1226
Hpy166II GTNNAC 6 cut(s) 25, 112, 534, 1098, 1237, 1694
Hpy8I GTNNAC 6 cut(s) 25, 112, 534, 1098, 1237, 1694
Hpy99I CGWCG 3 cut(s) 38, 54, 199
HpyAV CCTTC 8 cut(s) 208, 262, 388, 569, 617, 1159, 1211, 1297
HpyCH4III ACNGT 5 cut(s) 415, 616, 639, 1160, 1480
HpyCH4IV ACGT 7 cut(s) 5, 114, 197, 201, 405, 682, 2250
HpyF10VI GCNNNNNNNGC 4 cut(s) 989, 1052, 1916, 2138
HpyF3I CTNAG 9 cut(s) 317, 330, 653, 1195, 1334, 1937, 2019, 2180, 2269
HpySE526I ACGT 7 cut(s) 5, 114, 197, 201, 405, 682, 2250
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 2 cut(s) 54, 1793
Ksp22I TGATCA 1 cut(s) 1252
LguI GCTCTTC 1 cut(s) 864
LmnI GCTCC 4 cut(s) 172, 436, 632, 1373
Lsp1109I GCAGC 3 cut(s) 931, 967, 1004
LweI GCATC 6 cut(s) 168, 1111, 1279, 1564, 1931, 2032
MabI ACCWGGT 1 cut(s) 1570
MaeI CTAG 7 cut(s) 176, 363, 489, 513, 605, 705, 1889
MaeII ACGT 7 cut(s) 5, 114, 197, 201, 405, 682, 2250
MaeIII GTNAC 6 cut(s) 166, 1136, 1873, 2170, 2244, 2251
MfeI CAATTG 2 cut(s) 343, 1833
MflI RGATCY 5 cut(s) 649, 1561, 1708, 1957, 2008
MhlI GDGCHC 3 cut(s) 362, 433, 637
MlsI TGGCCA 1 cut(s) 1885
MluNI TGGCCA 1 cut(s) 1885
MlyI GAGTC 4 cut(s) 518, 1103, 1877, 1986
MmeI TCCRAC 3 cut(s) 164, 267, 922
Mox20I TGGCCA 1 cut(s) 1885
MroXI GAANNNNTTC 2 cut(s) 130, 592
MscI TGGCCA 1 cut(s) 1885
MseI TTAA 7 cut(s) 245, 570, 618, 1005, 1079, 1272, 1922
MslI CAYNNNNRTG 3 cut(s) 164, 1924, 2040
Msp20I TGGCCA 1 cut(s) 1885
MspI CCGG 4 cut(s) 164, 1262, 1728, 1955
MspR9I CCNGG 7 cut(s) 164, 385, 1012, 1262, 1397, 1412, 1572
MunI CAATTG 2 cut(s) 343, 1833
Mva1269I GAATGC 4 cut(s) 920, 946, 1520, 2191
MvaI CCWGG 5 cut(s) 385, 1012, 1397, 1412, 1572
MvnI CGCG 2 cut(s) 54, 1795
MwoI GCNNNNNNNGC 4 cut(s) 989, 1052, 1916, 2138
NciI CCSGG 2 cut(s) 164, 1262
NlaIV GGNNCC 4 cut(s) 300, 399, 1375, 1710
NmuCI GTSAC 6 cut(s) 166, 1136, 1873, 2170, 2244, 2251
NspI RCATGY 2 cut(s) 853, 884
NspV TTCGAA 1 cut(s) 461
PaeR7I CTCGAG 2 cut(s) 537, 1600
PciSI GCTCTTC 1 cut(s) 864
PctI GAATGC 4 cut(s) 920, 946, 1520, 2191
PdmI GAANNNNTTC 2 cut(s) 130, 592
PfeI GAWTC 7 cut(s) 76, 126, 313, 724, 1676, 2203, 2287
Pfl23II CGTACG 1 cut(s) 198
PkrI GCNGC 4 cut(s) 32, 946, 982, 994
Ple19I CGATCG 1 cut(s) 97
PleI GAGTC 4 cut(s) 517, 1102, 1876, 1986
PmaCI CACGTG 1 cut(s) 2251
PmlI CACGTG 1 cut(s) 2251
PpsI GAGTC 4 cut(s) 517, 1102, 1876, 1986
Ppu21I YACGTR 3 cut(s) 202, 683, 2251
PpuMI RGGWCCY 1 cut(s) 398
PshBI ATTAAT 1 cut(s) 570
Psp5II RGGWCCY 1 cut(s) 398
Psp6I CCWGG 5 cut(s) 383, 1010, 1395, 1410, 1570
PspCI CACGTG 1 cut(s) 2251
PspGI CCWGG 5 cut(s) 383, 1010, 1395, 1410, 1570
PspLI CGTACG 1 cut(s) 198
PspN4I GGNNCC 4 cut(s) 300, 399, 1375, 1710
PspPI GGNCC 3 cut(s) 109, 398, 895
PspPPI RGGWCCY 1 cut(s) 398
PspXI VCTCGAGB 2 cut(s) 537, 1600
PsuI RGATCY 5 cut(s) 649, 1561, 1708, 1957, 2008
PvuI CGATCG 1 cut(s) 97
RseI CAYNNNNRTG 3 cut(s) 164, 1924, 2040
SalI GTCGAC 1 cut(s) 1096
SapI GCTCTTC 1 cut(s) 864
SaqAI TTAA 7 cut(s) 245, 570, 618, 1005, 1079, 1272, 1922
SatI GCNGC 4 cut(s) 31, 945, 981, 993
Sau96I GGNCC 3 cut(s) 109, 398, 895
ScaI AGTACT 1 cut(s) 517
SchI GAGTC 4 cut(s) 518, 1103, 1877, 1986
ScrFI CCNGG 7 cut(s) 164, 385, 1012, 1262, 1397, 1412, 1572
SduI GDGCHC 3 cut(s) 362, 433, 637
SexAI ACCWGGT 1 cut(s) 1570
SfaNI GCATC 6 cut(s) 168, 1111, 1279, 1564, 1931, 2032
Sfr274I CTCGAG 2 cut(s) 537, 1600
SfuI TTCGAA 1 cut(s) 461
SinI GGWCC 3 cut(s) 109, 398, 895
SlaI CTCGAG 2 cut(s) 537, 1600
SmiMI CAYNNNNRTG 3 cut(s) 164, 1924, 2040
SmlI CTYRAG 4 cut(s) 537, 749, 950, 1600
SmoI CTYRAG 4 cut(s) 537, 749, 950, 1600
SsiI CCGC 5 cut(s) 14, 20, 30, 68, 1447
SspMI CTAG 7 cut(s) 176, 363, 489, 513, 605, 705, 1889
StyD4I CCNGG 7 cut(s) 162, 383, 1010, 1260, 1395, 1410, 1570
StyI CCWWGG 1 cut(s) 1472
TaaI ACNGT 5 cut(s) 415, 616, 639, 1160, 1480
TaiI ACGT 7 cut(s) 8, 117, 200, 204, 408, 685, 2253
TaqI TCGA 6 cut(s) 461, 538, 1097, 1282, 1558, 1601
TatI WGTACW 5 cut(s) 515, 852, 1668, 2124, 2324
TauI GCSGC 1 cut(s) 33
TfiI GAWTC 7 cut(s) 76, 126, 313, 724, 1676, 2203, 2287
Tru1I TTAA 7 cut(s) 245, 570, 618, 1005, 1079, 1272, 1922
Tru9I TTAA 7 cut(s) 245, 570, 618, 1005, 1079, 1272, 1922
TscAI CASTG 2 cut(s) 15, 2175
TseFI GTSAC 6 cut(s) 166, 1136, 1873, 2170, 2244, 2251
TseI GCWGC 3 cut(s) 944, 980, 992
Tsp45I GTSAC 6 cut(s) 166, 1136, 1873, 2170, 2244, 2251
TspDTI ATGAA 7 cut(s) 227, 440, 588, 636, 701, 1419, 1908
TspGWI ACGGA 5 cut(s) 51, 57, 185, 231, 1679
TspRI CASTG 2 cut(s) 15, 2175
VpaK11BI GGWCC 3 cut(s) 109, 398, 895
VspI ATTAAT 1 cut(s) 570
XapI RAATTY 2 cut(s) 1112, 1329
XceI RCATGY 2 cut(s) 853, 884
XcmI CCANNNNNNNNNTGG 2 cut(s) 1451, 1470
XhoI CTCGAG 2 cut(s) 537, 1600
XmiI GTMKAC 2 cut(s) 533, 1097
XmnI GAANNNNTTC 2 cut(s) 130, 592
XspI CTAG 7 cut(s) 176, 363, 489, 513, 605, 705, 1889
ZraI GACGTC 1 cut(s) 6
ZrmI AGTACT 1 cut(s) 517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.