Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002207

Physical Location & Seq

Genomic Coordinates Reverse (-)

85412385 .. 85417654

Gene Structure 5270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00147700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGGCGTCAGTGGCGGTGGCGGTCAACGGCGGCGACGGAAACGGAAGCCGACGCGCTGTGAAGTGGGCGGTGGAGAATCTCATGCCCACAGCCGATCGCTTCGTATTGGTCCACGTCATGCCCAGAATCACTTCAATTCCAACTCCATCAGGAGATCGCATCCCGGTGACGGAGCTAGACGAGGGTGTGGTGGCGACGTATGTGAAGGACGTGAAGGACAAGTACGAGGAGGTTTTTACTCCATTGAAAAAGCTATGCAAGTCAAAGAAGGTTGAAACATTGGTATTGGAGGATGAGGTTCCTGCAAATGGGATTCTAAGCTTTATATCTCAGTCTGATATCAATTGTTTAGTTTTGGGCTCTAGCAATTCCAATTACATAACCAGGAAACTGAAGGGACCAGATGTACCGACAGTTGTTCTGAAATGTGCTCCCGAGAGTTGTGATATTCATGTCGTTTCGAAACAAAGAGTTATCACAAAATCAGCTAGTCTCTCGTCTGCTTGTGAGTCTAGTACTGCTAACGGGTTGCCTACTCGAGGAGAAGATGAGGGCTTTTCCAGAGACATGAATGAAGGGATAACTGGAAGTCGTTCTTCCTACCTAGTATCCACAGTTAATGAAGGTTATGGAGCACCGTCAATGTCAGACCTTAGTTATCTAAGTTCTGAAGCATTTACGCGTATGGAATTTCCTGCAAACGCTAGTGTGGATCAGGAAAGGAATCATCAGAACTTGGAAGAGAACCATGAGATTATTTCTTTCCAGCGTGGAAGTTCCCCAATTTCTTCAAACATCGAGCAGTCATATGTGCAGATTGAAGTGGAACAGTTGCGTGCAGAATTGCAAAATACTCTTGGCATGTATAAAAGAGCTTGTGAAGAGCTGGTACATGCCCAAAGCAAGGTCCAACTACTTTCTTCCGAATGCCTTGAAGAAGCAAGAAGAGTGAATGCTGCTCTTGAGAGTGAGGAAACTTTGAGAAAAATTGCTGCTGAAGAGGCAGCAAAGCATTTGAAGGCCAGGAAAGAGATTGAGGAGGCAAAAGTTCTGCTTGCTAAAGAGGCTTATGAGAGGCAAGTTGCTGAATTAAATGCCCTGAAAGAGTCGACAGGGAAAAAGGAATTTGTTGATGCACTCTTCTCATGTGACAATAGGTACAGGAGATACAGTAGGAAGGAAATAGAGATAGCAACAAACTTCTTCTCAGAGACTAATGTGATTGGTGAAGGAGGATATGGGAAAGTTTACAAGTGCAGTCTTGATCAAACCCCGGTAGCTGTTAAGGTTCTTCGAACTGATGCAGTTGAGAAGAAAGAGGAGTTTCTGAAAGAGGTTGAAATTCTTAGTCAGCTACATCATCCTAACATAGTTTTGCTTCTTGGAGCCTGTCCGGAGATCGGTAGCCTGGTCTATGAATACCTGGAAAATGGGAACTTGGAAGATTATATCTCCCACCGCCAGAATGGAAAACCATCTCTCCCTTGGACTGTTAGGTTCAGGATAATTTTTGAAATAGCGTGTGGGCTTGCATTCTTACACAACTCAAAGACGAACCCTATTGTGCATCGAGATCTAAAGCCAGGTAATGTCTTACTGGACAGAAACTACTCGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTACAGACATCGTGCCTGACAACATAACGGACTACAGAGAATCAATTATTGCTGGTACACTCTTTTACATGGATCCAGAGTATCAGAGAACTGGCACAGTTAGGCCCAAATCAGATTTGTACGCTTTTGGGGTCATTATCCTCCAAGTATTGACAGCACGGCATCCAAATAGGCTTATATACATTGTGGAAAATGCAATTGCAAATGGTTCTTTTGCTGACTTTTTAGATGAGTCAGTCACAGATTGGCCACTAGATGAAACAGAGGAATTGGCTCAACTTGCATTAAGGTGTTCAAAGCTTAGATGCAGGGATAGACCGGATCTTGAAACTGAAGTTCTGCCAGTTCTCAAAAGACTCGTTGATATTGCAGATCCTAGTTCTAAGATTGAGAGAAACCATATTGATGCACCAAGCCACTACTATTGCCCAATACTTCAGGAAATTATGGACGACCCACACATTTCTGCCGATGGCTTTACTTATGAGTACAGAGCAATCAAAGCATGGCTTGACAAACACAATGTATCCCCAGTGACAAGGCTTAGACTTCAGCATTCAGAGTTGACTCCTAACCATACATTGCGTTCAGCTATACAAGAATGGAGGTCACGCGTGACATACTCTACTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr U-box Usp

Protein Analysis

760

Amino Acids

85.17

Weight (kDa)

5.53

Isoelectric Point (pI)

49.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	403 - 657	1.3e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	405 - 659	1e-40	Protein tyrosine and serine/threonine kinase
U-box	PF04564	686 - 752	2.3e-17	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19410 AT2G19410 AT2G19410 AT5G57035
fragaria_vesca	FvH4_1g07970 FvH4_1g07970 FvH4_1g07970 FvH4_1g07970 FvH4_1g07970
malus_domestica	MD02G1084100.v1.1
prunus_persica	Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1
pyrus_communis	pycom02g06680 pycom02g06690
rosa_chinensis	RchiOBHm_Chr1g0330911 RchiOBHm_Chr2g0093881 RchiOBHm_Chr2g0094001 RchiOBHm_Chr7g0232521
rosa_laevigata	RLG00000001329 RLG00000016442 RLG00000016444
rosa_multiflora	Rmu_sc0003027.1_g000005 Rmu_sc0017523.1_g000016 Rmu_ssc0000369.1_g000008
rosa_roxburghii	Rroxscaffold_2G00147570 Rroxscaffold_2G00147700
rosa_rugosa	Rorug02G0040200 Rorug02G0040300
rosa_samantha	Rh2AG086900 Rh2AG087700 Rh2BG087700 Rh2CG090000 Rh2DG085600 Rh2DG086700 Rh2DG086800 Rh3CG371600 Rh7CG448000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1109
AccII	CGCG	3 cut(s)	54, 682, 2262
AccIII	TCCGGA	1 cut(s)	1393
AciI	CCGC	5 cut(s)	14, 20, 30, 68, 1459
AclWI	GGATC	5 cut(s)	720, 1715, 1728, 1977, 2015
AcoI	YGGCCR	1 cut(s)	1895
AcsI	RAATTY	3 cut(s)	689, 1124, 1341
AcuI	CTGAAG	6 cut(s)	413, 690, 1017, 2001, 2069, 2183
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	8 cut(s)	224, 408, 517, 891, 1160, 1705, 1769, 2138
AfiI	CCNNNNNNNGG	5 cut(s)	169, 308, 539, 904, 1400
AflIII	ACRYGT	2 cut(s)	680, 2260
AjiI	CACGTC	2 cut(s)	115, 211
AjnI	CCWGG	5 cut(s)	383, 1022, 1407, 1422, 1582
Alw21I	GWGCWC	2 cut(s)	433, 637
Alw26I	GTCTC	3 cut(s)	497, 558, 1205
AlwI	GGATC	5 cut(s)	720, 1715, 1728, 1977, 2015
Ama87I	CYCGRG	3 cut(s)	434, 537, 1612
Aor13HI	TCCGGA	1 cut(s)	1393
AoxI	GGCC	3 cut(s)	1020, 1751, 1895
ApeKI	GCWGC	3 cut(s)	956, 992, 1004
ApoI	RAATTY	3 cut(s)	689, 1124, 1341
Asp700I	GAANNNNTTC	2 cut(s)	130, 592
AspLEI	GCGC	1 cut(s)	56
AspS9I	GGNCC	4 cut(s)	109, 398, 907, 1752
AsuC2I	CCSGG	2 cut(s)	164, 1274
AsuHPI	GGTGA	2 cut(s)	178, 1238
AsuII	TTCGAA	2 cut(s)	461, 1294
AvaI	CYCGRG	3 cut(s)	434, 537, 1612
AvaII	GGWCC	3 cut(s)	109, 398, 907
BalI	TGGCCA	1 cut(s)	1897
BamHI	GGATCC	1 cut(s)	1720
BanII	GRGCYC	1 cut(s)	362
BarI	GAAGNNNNNNTAC	4 cut(s)	206, 238, 873, 905
Bbv12I	GWGCWC	2 cut(s)	433, 637
BbvI	GCAGC	3 cut(s)	943, 979, 1016
BccI	CCATC	3 cut(s)	154, 1483, 2114
BceAI	ACGGC	2 cut(s)	43, 1823
BciT130I	CCWGG	5 cut(s)	385, 1024, 1409, 1424, 1584
BciVI	GTATCC	2 cut(s)	619, 2185
BclI	TGATCA	1 cut(s)	1264
BcnI	CCSGG	2 cut(s)	164, 1274
BcoDI	GTCTC	3 cut(s)	497, 558, 1205
BfaI	CTAG	8 cut(s)	176, 363, 489, 513, 605, 705, 1901, 2025
BfmI	CTRYAG	1 cut(s)	1681
BfuI	GTATCC	2 cut(s)	619, 2185
BglII	AGATCT	1 cut(s)	1573
BisI	GCNGC	4 cut(s)	31, 957, 993, 1005
BlsI	GCNGC	4 cut(s)	32, 958, 994, 1006
BmcAI	AGTACT	1 cut(s)	517
Bme1390I	CCNGG	7 cut(s)	164, 385, 1024, 1274, 1409, 1424, 1584
Bme18I	GGWCC	3 cut(s)	109, 398, 907
BmeT110I	CYCGRG	3 cut(s)	434, 537, 1612
BmgBI	CACGTC	2 cut(s)	115, 211
BmgT120I	GGNCC	4 cut(s)	109, 398, 907, 1752
BmiI	GGNNCC	4 cut(s)	300, 399, 1387, 1722
BmrFI	CCNGG	7 cut(s)	164, 385, 1024, 1274, 1409, 1424, 1584
BmrI	ACTGGG	1 cut(s)	2174
BmsI	GCATC	7 cut(s)	168, 1123, 1291, 1576, 1819, 1943, 2044
BmuI	ACTGGG	1 cut(s)	2174
Bpu14I	TTCGAA	2 cut(s)	461, 1294
BpuEI	CTTGAG	1 cut(s)	983
BpuMI	CCSGG	2 cut(s)	164, 1274
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	2 cut(s)	1272, 1484
BsaWI	WCCGGW	2 cut(s)	1393, 1966
BsaXI	ACNNNNNCTCC	4 cut(s)	1156, 1186, 1464, 1494
Bsc4I	CCNNNNNNNGG	5 cut(s)	169, 308, 539, 904, 1400
Bse1I	ACTGG	5 cut(s)	589, 1602, 1744, 1991, 2180
Bse3DI	GCAATG	1 cut(s)	2228
BseAI	TCCGGA	1 cut(s)	1393
BseBI	CCWGG	5 cut(s)	385, 1024, 1409, 1424, 1584
BseDI	CCNNGG	2 cut(s)	1272, 1484
BseGI	GGATG	5 cut(s)	159, 298, 1360, 1633, 1810
BseLI	CCNNNNNNNGG	5 cut(s)	169, 308, 539, 904, 1400
BseMI	GCAATG	1 cut(s)	2228
BseMII	CTCAG	2 cut(s)	344, 1221
BseNI	ACTGG	5 cut(s)	589, 1602, 1744, 1991, 2180
BseRI	GAGGAG	4 cut(s)	242, 555, 1052, 1334
BseXI	GCAGC	3 cut(s)	943, 979, 1016
BsgI	GTGCAG	3 cut(s)	833, 858, 1276
Bsh1236I	CGCG	3 cut(s)	54, 682, 2262
Bsh1285I	CGRYCG	1 cut(s)	97
BshFI	GGCC	3 cut(s)	1022, 1753, 1897
BsiEI	CGRYCG	1 cut(s)	97
BsiHKAI	GWGCWC	2 cut(s)	433, 637
BsiHKCI	CYCGRG	3 cut(s)	434, 537, 1612
BsiSI	CCGG	4 cut(s)	164, 1274, 1394, 1967
BslFI	GGGAC	1 cut(s)	411
BslI	CCNNNNNNNGG	5 cut(s)	169, 308, 539, 904, 1400
BsmAI	GTCTC	3 cut(s)	497, 558, 1205
BsmFI	GGGAC	1 cut(s)	411
BsmI	GAATGC	4 cut(s)	932, 958, 1532, 2203
BsnI	GGCC	3 cut(s)	1022, 1753, 1897
BsoBI	CYCGRG	3 cut(s)	434, 537, 1612
Bsp119I	TTCGAA	2 cut(s)	461, 1294
Bsp1286I	GDGCHC	3 cut(s)	362, 433, 637
Bsp13I	TCCGGA	1 cut(s)	1393
Bsp143I	GATC	9 cut(s)	94, 154, 712, 1264, 1398, 1573, 1720, 1969, 2020
BspACI	CCGC	5 cut(s)	14, 20, 30, 68, 1459
BspANI	GGCC	3 cut(s)	1022, 1753, 1897
BspCNI	CTCAG	2 cut(s)	343, 1220
BspEI	TCCGGA	1 cut(s)	1393
BspFNI	CGCG	3 cut(s)	54, 682, 2262
BspLI	GGNNCC	4 cut(s)	300, 399, 1387, 1722
BspPI	GGATC	5 cut(s)	720, 1715, 1728, 1977, 2015
BspQI	GCTCTTC	1 cut(s)	876
BspT104I	TTCGAA	2 cut(s)	461, 1294
BsrDI	GCAATG	1 cut(s)	2228
BsrI	ACTGG	5 cut(s)	589, 1602, 1744, 1991, 2180
BssECI	CCNNGG	2 cut(s)	1272, 1484
BssMI	GATC	9 cut(s)	94, 154, 712, 1264, 1398, 1573, 1720, 1969, 2020
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	1484
Bst2UI	CCWGG	5 cut(s)	385, 1024, 1409, 1424, 1584
Bst4CI	ACNGT	7 cut(s)	415, 616, 639, 831, 1172, 1492, 1747
Bst6I	CTCTTC	5 cut(s)	735, 876, 940, 993, 1145
BstACI	GRCGYC	1 cut(s)	5
BstBI	TTCGAA	2 cut(s)	461, 1294
BstC8I	GCNNGC	4 cut(s)	837, 1056, 1530, 1638
BstDEI	CTNAG	9 cut(s)	317, 330, 653, 662, 1207, 1346, 1949, 2031, 2192
BstENI	CCTNNNNNAGG	1 cut(s)	537
BstF5I	GGATG	5 cut(s)	159, 298, 1360, 1633, 1810
BstFNI	CGCG	3 cut(s)	54, 682, 2262
BstHHI	GCGC	1 cut(s)	56
BstKTI	GATC	9 cut(s)	97, 157, 715, 1267, 1401, 1576, 1723, 1972, 2023
BstMAI	GTCTC	3 cut(s)	497, 558, 1205
BstMBI	GATC	9 cut(s)	94, 154, 712, 1264, 1398, 1573, 1720, 1969, 2020
BstMCI	CGRYCG	1 cut(s)	97
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 1001, 1064, 1928, 2150
BstNI	CCWGG	5 cut(s)	385, 1024, 1409, 1424, 1584
BstNSI	RCATGY	2 cut(s)	865, 896
BstSCI	CCNGG	7 cut(s)	162, 383, 1022, 1272, 1407, 1422, 1582
BstSFI	CTRYAG	1 cut(s)	1681
BstUI	CGCG	3 cut(s)	54, 682, 2262
BstV1I	GCAGC	3 cut(s)	943, 979, 1016
BstX2I	RGATCY	4 cut(s)	1573, 1720, 1969, 2020
BstYI	RGATCY	4 cut(s)	1573, 1720, 1969, 2020
BsuI	GTATCC	2 cut(s)	619, 2185
BsuRI	GGCC	3 cut(s)	1022, 1753, 1897
BtrI	CACGTC	2 cut(s)	115, 211
BtsCI	GGATG	5 cut(s)	159, 298, 1360, 1633, 1810
BtsIMutI	CAGTG	2 cut(s)	15, 2187
Cac8I	GCNNGC	4 cut(s)	837, 1056, 1530, 1638
CfoI	GCGC	1 cut(s)	56
Cfr13I	GGNCC	4 cut(s)	109, 398, 907, 1752
CseI	GACGC	1 cut(s)	60
Csp6I	GTAC	8 cut(s)	223, 407, 516, 890, 1159, 1704, 1768, 2137
CspCI	CAANNNNNGTGG	2 cut(s)	2054, 2089
CviQI	GTAC	8 cut(s)	223, 407, 516, 890, 1159, 1704, 1768, 2137
DdeI	CTNAG	9 cut(s)	317, 330, 653, 662, 1207, 1346, 1949, 2031, 2192
DpnI	GATC	9 cut(s)	96, 156, 714, 1266, 1400, 1575, 1722, 1971, 2022
DpnII	GATC	9 cut(s)	94, 154, 712, 1264, 1398, 1573, 1720, 1969, 2020
EaeI	YGGCCR	1 cut(s)	1895
Eam1104I	CTCTTC	5 cut(s)	735, 876, 940, 993, 1145
EarI	CTCTTC	5 cut(s)	735, 876, 940, 993, 1145
Eco130I	CCWWGG	1 cut(s)	1484
Eco24I	GRGCYC	1 cut(s)	362
Eco32I	GATATC	1 cut(s)	340
Eco47I	GGWCC	3 cut(s)	109, 398, 907
Eco57I	CTGAAG	6 cut(s)	413, 690, 1017, 2001, 2069, 2183
Eco88I	CYCGRG	3 cut(s)	434, 537, 1612
EcoNI	CCTNNNNNAGG	1 cut(s)	537
EcoRII	CCWGG	5 cut(s)	383, 1022, 1407, 1422, 1582
EcoRV	GATATC	1 cut(s)	340
EcoT14I	CCWWGG	1 cut(s)	1484
EcoT38I	GRGCYC	1 cut(s)	362
ErhI	CCWWGG	1 cut(s)	1484
FalI	AAGNNNNNCTT	6 cut(s)	580, 612, 1038, 1070, 2142, 2174
FaqI	GGGAC	1 cut(s)	411
FauNDI	CATATG	1 cut(s)	808
FbaI	TGATCA	1 cut(s)	1264
FblI	GTMKAC	1 cut(s)	1109
Fnu4HI	GCNGC	4 cut(s)	31, 957, 993, 1005
FokI	GGATG	5 cut(s)	146, 305, 1347, 1640, 1797
FriOI	GRGCYC	1 cut(s)	362
Fsp4HI	GCNGC	4 cut(s)	31, 957, 993, 1005
FspBI	CTAG	8 cut(s)	176, 363, 489, 513, 605, 705, 1901, 2025
GlaI	GCGC	1 cut(s)	55
GluI	GCNGC	4 cut(s)	31, 957, 993, 1005
HaeIII	GGCC	3 cut(s)	1022, 1753, 1897
HapII	CCGG	4 cut(s)	164, 1274, 1394, 1967
HgaI	GACGC	1 cut(s)	60
HhaI	GCGC	1 cut(s)	56
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	1 cut(s)	54
HinP1I	GCGC	1 cut(s)	54
HincII	GTYRAC	3 cut(s)	25, 1110, 2214
HindII	GTYRAC	3 cut(s)	25, 1110, 2214
HindIII	AAGCTT	2 cut(s)	319, 1946
HpaII	CCGG	4 cut(s)	164, 1274, 1394, 1967
HphI	GGTGA	2 cut(s)	178, 1238
Hpy166II	GTNNAC	6 cut(s)	25, 112, 1110, 1249, 1706, 2214
Hpy8I	GTNNAC	6 cut(s)	25, 112, 1110, 1249, 1706, 2214
Hpy99I	CGWCG	3 cut(s)	38, 54, 199
HpyAV	CCTTC	9 cut(s)	199, 208, 262, 388, 569, 617, 1012, 1171, 1223
HpyCH4III	ACNGT	7 cut(s)	415, 616, 639, 831, 1172, 1492, 1747
HpyCH4IV	ACGT	3 cut(s)	114, 197, 210
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 1001, 1064, 1928, 2150
HpyF3I	CTNAG	9 cut(s)	317, 330, 653, 662, 1207, 1346, 1949, 2031, 2192
HpySE526I	ACGT	3 cut(s)	114, 197, 210
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	1 cut(s)	54
Kpn2I	TCCGGA	1 cut(s)	1393
Ksp22I	TGATCA	1 cut(s)	1264
Kzo9I	GATC	9 cut(s)	94, 154, 712, 1264, 1398, 1573, 1720, 1969, 2020
LguI	GCTCTTC	1 cut(s)	876
LmnI	GCTCC	4 cut(s)	172, 436, 632, 1385
Lsp1109I	GCAGC	3 cut(s)	943, 979, 1016
LweI	GCATC	7 cut(s)	168, 1123, 1291, 1576, 1819, 1943, 2044
MaeI	CTAG	8 cut(s)	176, 363, 489, 513, 605, 705, 1901, 2025
MaeII	ACGT	3 cut(s)	114, 197, 210
MaeIII	GTNAC	6 cut(s)	166, 1148, 1885, 2182, 2256, 2263
MalI	GATC	9 cut(s)	96, 156, 714, 1266, 1400, 1575, 1722, 1971, 2022
MboI	GATC	9 cut(s)	94, 154, 712, 1264, 1398, 1573, 1720, 1969, 2020
MfeI	CAATTG	2 cut(s)	343, 1845
MflI	RGATCY	4 cut(s)	1573, 1720, 1969, 2020
MhlI	GDGCHC	3 cut(s)	362, 433, 637
MlsI	TGGCCA	1 cut(s)	1897
MluI	ACGCGT	2 cut(s)	680, 2260
MluNI	TGGCCA	1 cut(s)	1897
MlyI	GAGTC	5 cut(s)	518, 1115, 1889, 1998, 2209
MmeI	TCCRAC	2 cut(s)	164, 934
Mox20I	TGGCCA	1 cut(s)	1897
MroI	TCCGGA	1 cut(s)	1393
MroXI	GAANNNNTTC	2 cut(s)	130, 592
MscI	TGGCCA	1 cut(s)	1897
MseI	TTAA	4 cut(s)	618, 1091, 1284, 1934
MslI	CAYNNNNRTG	3 cut(s)	164, 1936, 2052
Msp20I	TGGCCA	1 cut(s)	1897
MspI	CCGG	4 cut(s)	164, 1274, 1394, 1967
MspR9I	CCNGG	7 cut(s)	164, 385, 1024, 1274, 1409, 1424, 1584
MunI	CAATTG	2 cut(s)	343, 1845
Mva1269I	GAATGC	4 cut(s)	932, 958, 1532, 2203
MvaI	CCWGG	5 cut(s)	385, 1024, 1409, 1424, 1584
MvnI	CGCG	3 cut(s)	54, 682, 2262
MwoI	GCNNNNNNNGC	5 cut(s)	11, 1001, 1064, 1928, 2150
NciI	CCSGG	2 cut(s)	164, 1274
NdeI	CATATG	1 cut(s)	808
NdeII	GATC	9 cut(s)	94, 154, 712, 1264, 1398, 1573, 1720, 1969, 2020
NlaIV	GGNNCC	4 cut(s)	300, 399, 1387, 1722
NmuCI	GTSAC	6 cut(s)	166, 1148, 1885, 2182, 2256, 2263
NspI	RCATGY	2 cut(s)	865, 896
NspV	TTCGAA	2 cut(s)	461, 1294
PaeR7I	CTCGAG	2 cut(s)	537, 1612
PciSI	GCTCTTC	1 cut(s)	876
PctI	GAATGC	4 cut(s)	932, 958, 1532, 2203
PdmI	GAANNNNTTC	2 cut(s)	130, 592
PfeI	GAWTC	5 cut(s)	76, 126, 313, 724, 1688
PkrI	GCNGC	4 cut(s)	32, 958, 994, 1006
Ple19I	CGATCG	1 cut(s)	97
PleI	GAGTC	5 cut(s)	517, 1114, 1888, 1998, 2209
PpsI	GAGTC	5 cut(s)	517, 1114, 1888, 1998, 2209
Psp6I	CCWGG	5 cut(s)	383, 1022, 1407, 1422, 1582
PspGI	CCWGG	5 cut(s)	383, 1022, 1407, 1422, 1582
PspN4I	GGNNCC	4 cut(s)	300, 399, 1387, 1722
PspPI	GGNCC	4 cut(s)	109, 398, 907, 1752
PspXI	VCTCGAGB	2 cut(s)	537, 1612
PsuI	RGATCY	4 cut(s)	1573, 1720, 1969, 2020
PvuI	CGATCG	1 cut(s)	97
RsaI	GTAC	8 cut(s)	224, 408, 517, 891, 1160, 1705, 1769, 2138
RsaNI	GTAC	8 cut(s)	223, 407, 516, 890, 1159, 1704, 1768, 2137
RseI	CAYNNNNRTG	3 cut(s)	164, 1936, 2052
SalI	GTCGAC	1 cut(s)	1108
SapI	GCTCTTC	1 cut(s)	876
SaqAI	TTAA	4 cut(s)	618, 1091, 1284, 1934
SatI	GCNGC	4 cut(s)	31, 957, 993, 1005
Sau3AI	GATC	9 cut(s)	94, 154, 712, 1264, 1398, 1573, 1720, 1969, 2020
Sau96I	GGNCC	4 cut(s)	109, 398, 907, 1752
ScaI	AGTACT	1 cut(s)	517
SchI	GAGTC	5 cut(s)	518, 1115, 1889, 1998, 2209
ScrFI	CCNGG	7 cut(s)	164, 385, 1024, 1274, 1409, 1424, 1584
SduI	GDGCHC	3 cut(s)	362, 433, 637
SfaNI	GCATC	7 cut(s)	168, 1123, 1291, 1576, 1819, 1943, 2044
SfcI	CTRYAG	1 cut(s)	1681
Sfr274I	CTCGAG	2 cut(s)	537, 1612
SfuI	TTCGAA	2 cut(s)	461, 1294
SinI	GGWCC	3 cut(s)	109, 398, 907
SlaI	CTCGAG	2 cut(s)	537, 1612
SmiMI	CAYNNNNRTG	3 cut(s)	164, 1936, 2052
SmlI	CTYRAG	3 cut(s)	537, 962, 1612
SmoI	CTYRAG	3 cut(s)	537, 962, 1612
SsiI	CCGC	5 cut(s)	14, 20, 30, 68, 1459
SspMI	CTAG	8 cut(s)	176, 363, 489, 513, 605, 705, 1901, 2025
StyD4I	CCNGG	7 cut(s)	162, 383, 1022, 1272, 1407, 1422, 1582
StyI	CCWWGG	1 cut(s)	1484
TaaI	ACNGT	7 cut(s)	415, 616, 639, 831, 1172, 1492, 1747
TaiI	ACGT	3 cut(s)	117, 200, 213
TaqI	TCGA	7 cut(s)	461, 538, 798, 1109, 1294, 1570, 1613
TatI	WGTACW	2 cut(s)	515, 2136
TauI	GCSGC	1 cut(s)	33
TfiI	GAWTC	5 cut(s)	76, 126, 313, 724, 1688
Tru1I	TTAA	4 cut(s)	618, 1091, 1284, 1934
Tru9I	TTAA	4 cut(s)	618, 1091, 1284, 1934
TscAI	CASTG	2 cut(s)	15, 2187
TseFI	GTSAC	6 cut(s)	166, 1148, 1885, 2182, 2256, 2263
TseI	GCWGC	3 cut(s)	956, 992, 1004
Tsp45I	GTSAC	6 cut(s)	166, 1148, 1885, 2182, 2256, 2263
TspDTI	ATGAA	6 cut(s)	440, 584, 588, 636, 1431, 1920
TspGWI	ACGGA	4 cut(s)	51, 57, 185, 1691
TspRI	CASTG	2 cut(s)	15, 2187
VpaK11BI	GGWCC	3 cut(s)	109, 398, 907
XagI	CCTNNNNNAGG	1 cut(s)	537
XapI	RAATTY	3 cut(s)	689, 1124, 1341
XceI	RCATGY	2 cut(s)	865, 896
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1463, 1482
XhoI	CTCGAG	2 cut(s)	537, 1612
XmiI	GTMKAC	1 cut(s)	1109
XmnI	GAANNNNTTC	2 cut(s)	130, 592
XspI	CTAG	8 cut(s)	176, 363, 489, 513, 605, 705, 1901, 2025
ZrmI	AGTACT	1 cut(s)	517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.