U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19410 AT2G19410 AT2G19410 AT5G57035 |
| fragaria_vesca | FvH4_1g07970 FvH4_1g07970 FvH4_1g07970 FvH4_1g07970 FvH4_1g07970 |
| malus_domestica | MD02G1084100.v1.1 |
| prunus_persica | Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 |
| pyrus_communis | pycom02g06680 pycom02g06690 |
| rosa_chinensis | RchiOBHm_Chr1g0330911 RchiOBHm_Chr2g0093881 RchiOBHm_Chr2g0094001 RchiOBHm_Chr7g0232521 |
| rosa_laevigata | RLG00000001329 RLG00000016442 RLG00000016444 |
| rosa_multiflora | Rmu_sc0003027.1_g000005 Rmu_sc0017523.1_g000016 Rmu_ssc0000369.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00147570 Rroxscaffold_2G00147700 |
| rosa_rugosa | Rorug02G0040200 Rorug02G0040300 |
| rosa_samantha | Rh2AG086900 Rh2AG087700 Rh2BG087700 Rh2CG090000 Rh2DG085600 Rh2DG086700 Rh2DG086800 Rh3CG371600 Rh7CG448000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 56 |
| AclWI | GGATC | 3 cut(s) | 12, 261, 299 |
| AcoI | YGGCCR | 1 cut(s) | 179 |
| AcuI | CTGAAG | 2 cut(s) | 285, 353 |
| AflIII | ACRYGT | 1 cut(s) | 54 |
| AgsI | TTSAA | 2 cut(s) | 228, 260 |
| AluBI | AGCT | 1 cut(s) | 232 |
| AluI | AGCT | 1 cut(s) | 232 |
| AlwI | GGATC | 3 cut(s) | 12, 261, 299 |
| AoxI | GGCC | 1 cut(s) | 179 |
| BalI | TGGCCA | 1 cut(s) | 181 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BceAI | ACGGC | 1 cut(s) | 107 |
| BfaI | CTAG | 1 cut(s) | 185 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrI | ACTGGG | 1 cut(s) | 303 |
| BmsI | GCATC | 3 cut(s) | 103, 227, 328 |
| BmuI | ACTGGG | 1 cut(s) | 303 |
| BsaWI | WCCGGW | 1 cut(s) | 250 |
| Bse1I | ACTGG | 3 cut(s) | 28, 275, 309 |
| BseGI | GGATG | 1 cut(s) | 94 |
| BseNI | ACTGG | 3 cut(s) | 28, 275, 309 |
| BseRI | GAGGAG | 1 cut(s) | 212 |
| Bsh1236I | CGCG | 1 cut(s) | 56 |
| BshFI | GGCC | 1 cut(s) | 181 |
| BsiSI | CCGG | 1 cut(s) | 251 |
| BsnI | GGCC | 1 cut(s) | 181 |
| Bsp143I | GATC | 4 cut(s) | 4, 253, 304, 318 |
| BspANI | GGCC | 1 cut(s) | 181 |
| BspFNI | CGCG | 1 cut(s) | 56 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 3 cut(s) | 12, 261, 299 |
| BsrI | ACTGG | 3 cut(s) | 28, 275, 309 |
| BssMI | GATC | 4 cut(s) | 4, 253, 304, 318 |
| BstDEI | CTNAG | 2 cut(s) | 233, 315 |
| BstF5I | GGATG | 1 cut(s) | 94 |
| BstFNI | CGCG | 1 cut(s) | 56 |
| BstKTI | GATC | 4 cut(s) | 7, 256, 307, 321 |
| BstMBI | GATC | 4 cut(s) | 4, 253, 304, 318 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 212 |
| BstUI | CGCG | 1 cut(s) | 56 |
| BstX2I | RGATCY | 3 cut(s) | 4, 253, 304 |
| BstYI | RGATCY | 3 cut(s) | 4, 253, 304 |
| BsuRI | GGCC | 1 cut(s) | 181 |
| BtsCI | GGATG | 1 cut(s) | 94 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 338, 373 |
| CviJI | RGCY | 5 cut(s) | 106, 181, 206, 232, 348 |
| CviKI_1 | RGCY | 5 cut(s) | 106, 181, 206, 232, 348 |
| DdeI | CTNAG | 2 cut(s) | 233, 315 |
| DpnI | GATC | 4 cut(s) | 6, 255, 306, 320 |
| DpnII | GATC | 4 cut(s) | 4, 253, 304, 318 |
| EaeI | YGGCCR | 1 cut(s) | 179 |
| Eco57I | CTGAAG | 2 cut(s) | 285, 353 |
| FaiI | YATR | 5 cut(s) | 52, 110, 112, 126, 333 |
| FokI | GGATG | 1 cut(s) | 81 |
| FspBI | CTAG | 1 cut(s) | 185 |
| HaeIII | GGCC | 1 cut(s) | 181 |
| HapII | CCGG | 1 cut(s) | 251 |
| HindIII | AAGCTT | 1 cut(s) | 230 |
| HinfI | GANTC | 2 cut(s) | 164, 288 |
| HpaII | CCGG | 1 cut(s) | 251 |
| Hpy188I | TCNGA | 3 cut(s) | 18, 46, 282 |
| Hpy188III | TCNNGA | 3 cut(s) | 8, 257, 322 |
| HpyCH4V | TGCA | 6 cut(s) | 128, 134, 215, 240, 302, 341 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 212 |
| HpyF3I | CTNAG | 2 cut(s) | 233, 315 |
| Kzo9I | GATC | 4 cut(s) | 4, 253, 304, 318 |
| LpnPI | CCDG | 7 cut(s) | 9, 21, 226, 264, 288, 322, 356 |
| LweI | GCATC | 3 cut(s) | 103, 227, 328 |
| MaeI | CTAG | 1 cut(s) | 185 |
| MaeIII | GTNAC | 1 cut(s) | 169 |
| MalI | GATC | 4 cut(s) | 6, 255, 306, 320 |
| MboI | GATC | 4 cut(s) | 4, 253, 304, 318 |
| MfeI | CAATTG | 1 cut(s) | 129 |
| MflI | RGATCY | 3 cut(s) | 4, 253, 304 |
| MlsI | TGGCCA | 1 cut(s) | 181 |
| MluCI | AATT | 2 cut(s) | 30, 129 |
| MluI | ACGCGT | 1 cut(s) | 54 |
| MluNI | TGGCCA | 1 cut(s) | 181 |
| MlyI | GAGTC | 2 cut(s) | 173, 282 |
| MmeI | TCCRAC | 1 cut(s) | 100 |
| MnlI | CCTC | 2 cut(s) | 83, 190 |
| Mox20I | TGGCCA | 1 cut(s) | 181 |
| MscI | TGGCCA | 1 cut(s) | 181 |
| MseI | TTAA | 1 cut(s) | 218 |
| MslI | CAYNNNNRTG | 2 cut(s) | 220, 336 |
| Msp20I | TGGCCA | 1 cut(s) | 181 |
| MspI | CCGG | 1 cut(s) | 251 |
| MunI | CAATTG | 1 cut(s) | 129 |
| MvnI | CGCG | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 212 |
| NdeII | GATC | 4 cut(s) | 4, 253, 304, 318 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmuCI | GTSAC | 1 cut(s) | 169 |
| PleI | GAGTC | 2 cut(s) | 172, 282 |
| PpsI | GAGTC | 2 cut(s) | 172, 282 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PsuI | RGATCY | 3 cut(s) | 4, 253, 304 |
| RseI | CAYNNNNRTG | 2 cut(s) | 220, 336 |
| SaqAI | TTAA | 1 cut(s) | 218 |
| Sau3AI | GATC | 4 cut(s) | 4, 253, 304, 318 |
| SchI | GAGTC | 2 cut(s) | 173, 282 |
| SetI | ASST | 3 cut(s) | 224, 234, 375 |
| SfaNI | GCATC | 3 cut(s) | 103, 227, 328 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 220, 336 |
| Sse9I | AATT | 2 cut(s) | 30, 129 |
| SspMI | CTAG | 1 cut(s) | 185 |
| TaqI | TCGA | 1 cut(s) | 321 |
| TasI | AATT | 2 cut(s) | 30, 129 |
| Tru1I | TTAA | 1 cut(s) | 218 |
| Tru9I | TTAA | 1 cut(s) | 218 |
| TseFI | GTSAC | 1 cut(s) | 169 |
| Tsp45I | GTSAC | 1 cut(s) | 169 |
| XspI | CTAG | 1 cut(s) | 185 |