Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0002207

Physical Location & Seq

Genomic Coordinates Forward (+)

7313148 .. 7316760

Gene Structure 3613 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG086900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGACGTCAGTGGCGGTGGCGGTCAACGGCGGCGACGGAAACGGAAGCCGACGCGCCGTGAAGTGGGCGGTGGAGAATCTCATGCCCACAGCCGATCGCTTCGTATTGGTCCACGTCATGCCCAGAATCACTTCAATTCCAACTCCATCAGGAGATCGCATCCCGGTGACGGAGCTAGATGAGGGTGTGGTGGCGACGTACGTGAATGACATGAAGGACAAGTACGAGGAGGTTTTCACTCCGTTAAAGAAGCTATGCAAGTCAAAGAAGGTTGAAACATTGATATTGGAGGATGAGGTTCCTGCAAATGGGATTCTAAGCTTTATATCTCAGTCTGATATCAATTGTTTAGTTTTGGGCTCTAGCAATTCTAATTACATAACCAGGAAACTGAAGGGACCAGATGTACCGACAGTTGTTCTGAAATGTGCTCCCGAGAGTTGTGATATTCATGTCGTTTCGAAACAAAGAGTTATCACAAAATCAGCTAGTCTCTCGTCTGCTTGTGAGTCTATTACTGCTAACGGGCTGTCTACTCGAGGAGAAGATGGGGGGTTTTCCTCAGATATGAATGAAGGGATAACTGGAAGTCGTTCTTCCTACCTAGTATCCACAGTTAATGAAGGTTATGGAGCACCGTCCATGTCAGATCTTAGTTATATAAGTTCTGAAGCATTTACACGTATGGAGTTTCCTGCAAATGCTAGTGTGGATCAGGAAAGGAATCATCAGAACTTGGAAGAGAACCTTGAGATTATTTCTTTCCAGCGTGGAAGTTCCTCAATTTCTTCAAACATTGAGCAGATTGAAGTGGAAAAGTTGCGTGCAGAATTGCAAAATACTCTTGGCATGTACAAACGAGCTTGTGAAGAGCTGGTACATGCCCAAAGCAAGGTCCAACTACTTTCTTCCGAATGCCTTGAAGAAGCAAGAAGAGTAAATGCTGCTCTTGAGAGTGAGGAAACTTTGAGAAAAATTGCTGCTGAAGAGGCAGCAAAGCATTTGAAGGCCAGGAAAGAGATTGAGGAGGCAAAACTTCTGCTTGCTAAAGAGGCTTATGAGAGGCAAATTGCTGAATTAAATGCCCTGAAAGAGTCAACAGGGAAAAAGGAATTTGTTGATGCACTCTTCTCATGTGACAATAGGTACAGGAGATACAGTAGGAAGGAAATAGAGATAGCAACAAACTTCTTTTCAGAGACTAATGTGATTGGTGAAGGAGGATATGGGAAAGTTTACAAGTGCAGTCTTGATCAAACCCCAGTAGCTGTTAAGGTTCTTCGACCTGATGCAGTTGAGAAGAAAGAGGAGTTTCTGAAAGAGGTTGAAATTCTTAGTCAGCTACATCATCCTAACATAGTTTTGCTTCTTGGAGCCTGTCCAGAGATTGGTTGCCTGGTCTATGAATACCTGGAAAACGGGAACTTGGAAGATTATATCTCCCACCGCCAGAATGGAAAACCATCTCTCCCTTGGACTGTTAGGTTCAGGATAATTTTTGAAATAGCATGCGGGCTTGCATTCTTACACAACTCAAAGACGGACCCTATTGTGCATCGAGATCTAAAACCAGGTAATGTCTTACTGGACAGAAACTACTCGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTACAGACATCGTGCCTGACAACATAACGGAGTACAGAGAATCAATTATTGCTGGTACACTCTTTTACATGGATCCAGAGTATCAGAGAACTGGCACAATTAGACCCAAATCGGATTTATACGCATTTGGGTTCATTATCCTCCAACTATTGACAGCACGGCATCCAAATAGGCTTTTATACATTGTGGAAAATGCAATTGCAAATGGTTCTTTTGCCGACTTTTTAGATGAGTCAGTCACAGATTGGCCGCTAGATGAAACAGAGGAGTTGGCTCAACTTGCATTAAGGTGTTCAAAGCTTAGATGCAGGGATAGACCGGATCTTGAAACTGAAGTTCTGCCAGTTCTCAAAAGACTCGTTGATATTGCAGATCCTACTTCTAAGATTGAGAGAAACCATATTGATGCACCAAGCCACTACTATTGTCCAATACTTCAGGATATCATGGACGACCCACACATTTCTGCCGATGGCTTTACTTATGAGTACAGAGCAATCAAAGCATGGCTTGACAAACACAATGTATCCCCAGTGACAAGGCTTAGACTTCAGCATTCAGAGTTGACTCCTAACCATACATTGCGTTCAGCTATACAAGAATGGAGGTCACACGTGACATACTCTACTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr U-box Usp

Protein Analysis

756

Amino Acids

84.7

Weight (kDa)

5.44

Isoelectric Point (pI)

48.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	399 - 653	6.4e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	401 - 655	4.5e-40	Protein tyrosine and serine/threonine kinase
U-box	PF04564	682 - 749	9.2e-17	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19410 AT2G19410 AT2G19410 AT5G57035
fragaria_vesca	FvH4_1g07970 FvH4_1g07970 FvH4_1g07970 FvH4_1g07970 FvH4_1g07970
malus_domestica	MD02G1084100.v1.1
prunus_persica	Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1 Prupe.7G205400_v2.0.a1
pyrus_communis	pycom02g06680 pycom02g06690
rosa_chinensis	RchiOBHm_Chr1g0330911 RchiOBHm_Chr2g0093881 RchiOBHm_Chr2g0094001 RchiOBHm_Chr7g0232521
rosa_laevigata	RLG00000001329 RLG00000016442 RLG00000016444
rosa_multiflora	Rmu_sc0003027.1_g000005 Rmu_sc0017523.1_g000016 Rmu_ssc0000369.1_g000008
rosa_roxburghii	Rroxscaffold_2G00147570 Rroxscaffold_2G00147700
rosa_rugosa	Rorug02G0040200 Rorug02G0040300
rosa_samantha	Rh2AG086900 Rh2AG087700 Rh2BG087700 Rh2CG090000 Rh2DG085600 Rh2DG086700 Rh2DG086800 Rh3CG371600 Rh7CG448000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	8
AccB7I	CCANNNNNTGG	1 cut(s)	1388
AccI	GTMKAC	1 cut(s)	533
AccII	CGCG	1 cut(s)	54
AciI	CCGC	7 cut(s)	14, 20, 30, 68, 1447, 1512, 1886
AclWI	GGATC	5 cut(s)	720, 1703, 1716, 1965, 2003
AcoI	YGGCCR	1 cut(s)	1883
AcsI	RAATTY	2 cut(s)	1112, 1329
AcuI	CTGAAG	6 cut(s)	413, 690, 1005, 1989, 2057, 2171
AcvI	CACGTG	1 cut(s)	2251
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	9 cut(s)	200, 224, 408, 854, 879, 1148, 1670, 1693, 2126
AfiI	CCNNNNNNNGG	5 cut(s)	63, 169, 308, 892, 1388
AflIII	ACRYGT	2 cut(s)	680, 2248
AjiI	CACGTC	1 cut(s)	115
AjnI	CCWGG	5 cut(s)	383, 1010, 1395, 1410, 1570
Alw21I	GWGCWC	2 cut(s)	433, 637
Alw26I	GTCTC	2 cut(s)	497, 1193
AlwI	GGATC	5 cut(s)	720, 1703, 1716, 1965, 2003
AlwNI	CAGNNNCTG	1 cut(s)	1268
Ama87I	CYCGRG	3 cut(s)	434, 537, 1600
AoxI	GGCC	2 cut(s)	1008, 1883
ApeKI	GCWGC	3 cut(s)	944, 980, 992
ApoI	RAATTY	2 cut(s)	1112, 1329
Asp700I	GAANNNNTTC	2 cut(s)	130, 592
AspLEI	GCGC	1 cut(s)	56
AspS9I	GGNCC	4 cut(s)	109, 398, 895, 1543
AsuC2I	CCSGG	1 cut(s)	164
AsuHPI	GGTGA	2 cut(s)	178, 1226
AsuII	TTCGAA	1 cut(s)	461
AvaI	CYCGRG	3 cut(s)	434, 537, 1600
AvaII	GGWCC	4 cut(s)	109, 398, 895, 1543
BamHI	GGATCC	1 cut(s)	1708
BanII	GRGCYC	1 cut(s)	362
BarI	GAAGNNNNNNTAC	4 cut(s)	206, 238, 861, 893
BbrPI	CACGTG	1 cut(s)	2251
Bbv12I	GWGCWC	2 cut(s)	433, 637
BbvI	GCAGC	3 cut(s)	931, 967, 1004
BccI	CCATC	4 cut(s)	154, 542, 1471, 2102
BceAI	ACGGC	3 cut(s)	41, 43, 1811
BciT130I	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
BciVI	GTATCC	2 cut(s)	619, 2173
BclI	TGATCA	1 cut(s)	1252
BcnI	CCSGG	1 cut(s)	164
BcoDI	GTCTC	2 cut(s)	497, 1193
BfaI	CTAG	6 cut(s)	176, 363, 489, 605, 705, 1889
BfuI	GTATCC	2 cut(s)	619, 2173
BglII	AGATCT	2 cut(s)	649, 1561
BisI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
BlsI	GCNGC	5 cut(s)	32, 946, 982, 994, 1887
Bme1390I	CCNGG	6 cut(s)	164, 385, 1012, 1397, 1412, 1572
Bme18I	GGWCC	4 cut(s)	109, 398, 895, 1543
BmeT110I	CYCGRG	3 cut(s)	434, 537, 1600
BmgBI	CACGTC	1 cut(s)	115
BmgT120I	GGNCC	4 cut(s)	109, 398, 895, 1543
BmiI	GGNNCC	5 cut(s)	300, 399, 1375, 1545, 1710
BmrFI	CCNGG	6 cut(s)	164, 385, 1012, 1397, 1412, 1572
BmrI	ACTGGG	2 cut(s)	1256, 2162
BmsI	GCATC	7 cut(s)	168, 1111, 1279, 1564, 1807, 1931, 2032
BmuI	ACTGGG	2 cut(s)	1256, 2162
Bpu14I	TTCGAA	1 cut(s)	461
BpuEI	CTTGAG	2 cut(s)	770, 971
BpuMI	CCSGG	1 cut(s)	164
BsaAI	YACGTR	3 cut(s)	202, 683, 2251
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	1 cut(s)	1472
BsaWI	WCCGGW	1 cut(s)	1954
BsaXI	ACNNNNNCTCC	4 cut(s)	1144, 1174, 1452, 1482
Bsc4I	CCNNNNNNNGG	5 cut(s)	63, 169, 308, 892, 1388
Bse1I	ACTGG	6 cut(s)	589, 1262, 1590, 1732, 1979, 2168
Bse3DI	GCAATG	1 cut(s)	2216
BseBI	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
BseDI	CCNNGG	1 cut(s)	1472
BseGI	GGATG	5 cut(s)	159, 298, 1348, 1621, 1798
BseLI	CCNNNNNNNGG	5 cut(s)	63, 169, 308, 892, 1388
BseMI	GCAATG	1 cut(s)	2216
BseMII	CTCAG	2 cut(s)	344, 576
BseNI	ACTGG	6 cut(s)	589, 1262, 1590, 1732, 1979, 2168
BseRI	GAGGAG	5 cut(s)	242, 555, 1040, 1322, 1916
BseXI	GCAGC	3 cut(s)	931, 967, 1004
BsgI	GTGCAG	2 cut(s)	846, 1264
Bsh1236I	CGCG	1 cut(s)	54
Bsh1285I	CGRYCG	1 cut(s)	97
BshFI	GGCC	2 cut(s)	1010, 1885
BsiEI	CGRYCG	1 cut(s)	97
BsiHKAI	GWGCWC	2 cut(s)	433, 637
BsiHKCI	CYCGRG	3 cut(s)	434, 537, 1600
BsiSI	CCGG	2 cut(s)	164, 1955
BsiWI	CGTACG	1 cut(s)	198
BslFI	GGGAC	1 cut(s)	411
BslI	CCNNNNNNNGG	5 cut(s)	63, 169, 308, 892, 1388
BsmAI	GTCTC	2 cut(s)	497, 1193
BsmFI	GGGAC	1 cut(s)	411
BsmI	GAATGC	3 cut(s)	920, 1520, 2191
BsnI	GGCC	2 cut(s)	1010, 1885
BsoBI	CYCGRG	3 cut(s)	434, 537, 1600
Bsp119I	TTCGAA	1 cut(s)	461
Bsp1286I	GDGCHC	3 cut(s)	362, 433, 637
Bsp1407I	TGTACA	1 cut(s)	852
Bsp143I	GATC	9 cut(s)	94, 154, 649, 712, 1252, 1561, 1708, 1957, 2008
BspACI	CCGC	7 cut(s)	14, 20, 30, 68, 1447, 1512, 1886
BspANI	GGCC	2 cut(s)	1010, 1885
BspCNI	CTCAG	2 cut(s)	343, 575
BspFNI	CGCG	1 cut(s)	54
BspLI	GGNNCC	5 cut(s)	300, 399, 1375, 1545, 1710
BspPI	GGATC	5 cut(s)	720, 1703, 1716, 1965, 2003
BspQI	GCTCTTC	1 cut(s)	864
BspT104I	TTCGAA	1 cut(s)	461
BsrDI	GCAATG	1 cut(s)	2216
BsrGI	TGTACA	1 cut(s)	852
BsrI	ACTGG	6 cut(s)	589, 1262, 1590, 1732, 1979, 2168
BssECI	CCNNGG	1 cut(s)	1472
BssMI	GATC	9 cut(s)	94, 154, 649, 712, 1252, 1561, 1708, 1957, 2008
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	1472
Bst2UI	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
Bst4CI	ACNGT	5 cut(s)	415, 616, 639, 1160, 1480
Bst6I	CTCTTC	5 cut(s)	735, 864, 928, 981, 1133
BstACI	GRCGYC	1 cut(s)	5
BstAUI	TGTACA	1 cut(s)	852
BstBAI	YACGTR	3 cut(s)	202, 683, 2251
BstBI	TTCGAA	1 cut(s)	461
BstC8I	GCNNGC	6 cut(s)	825, 1044, 1510, 1514, 1518, 1626
BstDEI	CTNAG	8 cut(s)	317, 330, 562, 653, 1334, 1937, 2019, 2180
BstF5I	GGATG	5 cut(s)	159, 298, 1348, 1621, 1798
BstFNI	CGCG	1 cut(s)	54
BstHHI	GCGC	1 cut(s)	56
BstKTI	GATC	9 cut(s)	97, 157, 652, 715, 1255, 1564, 1711, 1960, 2011
BstMAI	GTCTC	2 cut(s)	497, 1193
BstMBI	GATC	9 cut(s)	94, 154, 649, 712, 1252, 1561, 1708, 1957, 2008
BstMCI	CGRYCG	1 cut(s)	97
BstMWI	GCNNNNNNNGC	4 cut(s)	989, 1052, 1916, 2138
BstNI	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
BstNSI	RCATGY	3 cut(s)	853, 884, 1512
BstSCI	CCNGG	6 cut(s)	162, 383, 1010, 1395, 1410, 1570
BstUI	CGCG	1 cut(s)	54
BstV1I	GCAGC	3 cut(s)	931, 967, 1004
BstX2I	RGATCY	5 cut(s)	649, 1561, 1708, 1957, 2008
BstYI	RGATCY	5 cut(s)	649, 1561, 1708, 1957, 2008
BsuI	GTATCC	2 cut(s)	619, 2173
BsuRI	GGCC	2 cut(s)	1010, 1885
BtrI	CACGTC	1 cut(s)	115
BtsCI	GGATG	5 cut(s)	159, 298, 1348, 1621, 1798
BtsIMutI	CAGTG	2 cut(s)	15, 2175
Cac8I	GCNNGC	6 cut(s)	825, 1044, 1510, 1514, 1518, 1626
CaiI	CAGNNNCTG	1 cut(s)	1268
CfoI	GCGC	1 cut(s)	56
Cfr13I	GGNCC	4 cut(s)	109, 398, 895, 1543
CseI	GACGC	1 cut(s)	60
CsiI	ACCWGGT	1 cut(s)	1570
Csp6I	GTAC	9 cut(s)	199, 223, 407, 853, 878, 1147, 1669, 1692, 2125
CspCI	CAANNNNNGTGG	2 cut(s)	2042, 2077
CviQI	GTAC	9 cut(s)	199, 223, 407, 853, 878, 1147, 1669, 1692, 2125
DdeI	CTNAG	8 cut(s)	317, 330, 562, 653, 1334, 1937, 2019, 2180
DpnI	GATC	9 cut(s)	96, 156, 651, 714, 1254, 1563, 1710, 1959, 2010
DpnII	GATC	9 cut(s)	94, 154, 649, 712, 1252, 1561, 1708, 1957, 2008
EaeI	YGGCCR	1 cut(s)	1883
Eam1104I	CTCTTC	5 cut(s)	735, 864, 928, 981, 1133
EarI	CTCTTC	5 cut(s)	735, 864, 928, 981, 1133
Eco130I	CCWWGG	1 cut(s)	1472
Eco24I	GRGCYC	1 cut(s)	362
Eco32I	GATATC	2 cut(s)	340, 2080
Eco47I	GGWCC	4 cut(s)	109, 398, 895, 1543
Eco57I	CTGAAG	6 cut(s)	413, 690, 1005, 1989, 2057, 2171
Eco72I	CACGTG	1 cut(s)	2251
Eco88I	CYCGRG	3 cut(s)	434, 537, 1600
EcoRII	CCWGG	5 cut(s)	383, 1010, 1395, 1410, 1570
EcoRV	GATATC	2 cut(s)	340, 2080
EcoT14I	CCWWGG	1 cut(s)	1472
EcoT38I	GRGCYC	1 cut(s)	362
ErhI	CCWWGG	1 cut(s)	1472
FalI	AAGNNNNNCTT	6 cut(s)	580, 612, 732, 764, 2130, 2162
FaqI	GGGAC	1 cut(s)	411
FauI	CCCGC	1 cut(s)	1505
FbaI	TGATCA	1 cut(s)	1252
FblI	GTMKAC	1 cut(s)	533
Fnu4HI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
FokI	GGATG	5 cut(s)	146, 305, 1335, 1628, 1785
FriOI	GRGCYC	1 cut(s)	362
Fsp4HI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
FspBI	CTAG	6 cut(s)	176, 363, 489, 605, 705, 1889
GlaI	GCGC	1 cut(s)	55
GluI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
HaeIII	GGCC	2 cut(s)	1010, 1885
HapII	CCGG	2 cut(s)	164, 1955
HgaI	GACGC	1 cut(s)	60
HhaI	GCGC	1 cut(s)	56
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	1 cut(s)	54
HinP1I	GCGC	1 cut(s)	54
HincII	GTYRAC	3 cut(s)	25, 1098, 2202
HindII	GTYRAC	3 cut(s)	25, 1098, 2202
HindIII	AAGCTT	2 cut(s)	319, 1934
HpaII	CCGG	2 cut(s)	164, 1955
HphI	GGTGA	2 cut(s)	178, 1226
Hpy166II	GTNNAC	7 cut(s)	25, 112, 534, 1098, 1237, 1694, 2202
Hpy8I	GTNNAC	7 cut(s)	25, 112, 534, 1098, 1237, 1694, 2202
Hpy99I	CGWCG	3 cut(s)	38, 54, 199
HpyAV	CCTTC	8 cut(s)	208, 262, 388, 569, 617, 1000, 1159, 1211
HpyCH4III	ACNGT	5 cut(s)	415, 616, 639, 1160, 1480
HpyCH4IV	ACGT	6 cut(s)	5, 114, 197, 201, 682, 2250
HpyF10VI	GCNNNNNNNGC	4 cut(s)	989, 1052, 1916, 2138
HpyF3I	CTNAG	8 cut(s)	317, 330, 562, 653, 1334, 1937, 2019, 2180
HpySE526I	ACGT	6 cut(s)	5, 114, 197, 201, 682, 2250
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	1 cut(s)	54
Ksp22I	TGATCA	1 cut(s)	1252
Kzo9I	GATC	9 cut(s)	94, 154, 649, 712, 1252, 1561, 1708, 1957, 2008
LguI	GCTCTTC	1 cut(s)	864
LmnI	GCTCC	4 cut(s)	172, 436, 632, 1373
Lsp1109I	GCAGC	3 cut(s)	931, 967, 1004
LweI	GCATC	7 cut(s)	168, 1111, 1279, 1564, 1807, 1931, 2032
MabI	ACCWGGT	1 cut(s)	1570
MaeI	CTAG	6 cut(s)	176, 363, 489, 605, 705, 1889
MaeII	ACGT	6 cut(s)	5, 114, 197, 201, 682, 2250
MaeIII	GTNAC	6 cut(s)	166, 1136, 1873, 2170, 2244, 2251
MalI	GATC	9 cut(s)	96, 156, 651, 714, 1254, 1563, 1710, 1959, 2010
MboI	GATC	9 cut(s)	94, 154, 649, 712, 1252, 1561, 1708, 1957, 2008
MfeI	CAATTG	2 cut(s)	343, 1833
MflI	RGATCY	5 cut(s)	649, 1561, 1708, 1957, 2008
MhlI	GDGCHC	3 cut(s)	362, 433, 637
MlyI	GAGTC	5 cut(s)	518, 1103, 1877, 1986, 2197
MmeI	TCCRAC	3 cut(s)	164, 922, 1804
MroXI	GAANNNNTTC	2 cut(s)	130, 592
MseI	TTAA	5 cut(s)	245, 618, 1079, 1272, 1922
MslI	CAYNNNNRTG	3 cut(s)	164, 1924, 2040
MspI	CCGG	2 cut(s)	164, 1955
MspR9I	CCNGG	6 cut(s)	164, 385, 1012, 1397, 1412, 1572
MunI	CAATTG	2 cut(s)	343, 1833
Mva1269I	GAATGC	3 cut(s)	920, 1520, 2191
MvaI	CCWGG	5 cut(s)	385, 1012, 1397, 1412, 1572
MvnI	CGCG	1 cut(s)	54
MwoI	GCNNNNNNNGC	4 cut(s)	989, 1052, 1916, 2138
NciI	CCSGG	1 cut(s)	164
NdeII	GATC	9 cut(s)	94, 154, 649, 712, 1252, 1561, 1708, 1957, 2008
NlaIV	GGNNCC	5 cut(s)	300, 399, 1375, 1545, 1710
NmuCI	GTSAC	6 cut(s)	166, 1136, 1873, 2170, 2244, 2251
NspI	RCATGY	3 cut(s)	853, 884, 1512
NspV	TTCGAA	1 cut(s)	461
PaeI	GCATGC	1 cut(s)	1512
PaeR7I	CTCGAG	2 cut(s)	537, 1600
PciSI	GCTCTTC	1 cut(s)	864
PctI	GAATGC	3 cut(s)	920, 1520, 2191
PdmI	GAANNNNTTC	2 cut(s)	130, 592
PfeI	GAWTC	5 cut(s)	76, 126, 313, 724, 1676
Pfl23II	CGTACG	1 cut(s)	198
PflMI	CCANNNNNTGG	1 cut(s)	1388
PkrI	GCNGC	5 cut(s)	32, 946, 982, 994, 1887
Ple19I	CGATCG	1 cut(s)	97
PleI	GAGTC	5 cut(s)	517, 1102, 1876, 1986, 2197
PmaCI	CACGTG	1 cut(s)	2251
PmlI	CACGTG	1 cut(s)	2251
PpsI	GAGTC	5 cut(s)	517, 1102, 1876, 1986, 2197
Ppu21I	YACGTR	3 cut(s)	202, 683, 2251
Psp6I	CCWGG	5 cut(s)	383, 1010, 1395, 1410, 1570
PspCI	CACGTG	1 cut(s)	2251
PspGI	CCWGG	5 cut(s)	383, 1010, 1395, 1410, 1570
PspLI	CGTACG	1 cut(s)	198
PspN4I	GGNNCC	5 cut(s)	300, 399, 1375, 1545, 1710
PspPI	GGNCC	4 cut(s)	109, 398, 895, 1543
PspXI	VCTCGAGB	2 cut(s)	537, 1600
PstNI	CAGNNNCTG	1 cut(s)	1268
PsuI	RGATCY	5 cut(s)	649, 1561, 1708, 1957, 2008
PvuI	CGATCG	1 cut(s)	97
RsaI	GTAC	9 cut(s)	200, 224, 408, 854, 879, 1148, 1670, 1693, 2126
RsaNI	GTAC	9 cut(s)	199, 223, 407, 853, 878, 1147, 1669, 1692, 2125
RseI	CAYNNNNRTG	3 cut(s)	164, 1924, 2040
SapI	GCTCTTC	1 cut(s)	864
SaqAI	TTAA	5 cut(s)	245, 618, 1079, 1272, 1922
SatI	GCNGC	5 cut(s)	31, 945, 981, 993, 1886
Sau3AI	GATC	9 cut(s)	94, 154, 649, 712, 1252, 1561, 1708, 1957, 2008
Sau96I	GGNCC	4 cut(s)	109, 398, 895, 1543
SchI	GAGTC	5 cut(s)	518, 1103, 1877, 1986, 2197
ScrFI	CCNGG	6 cut(s)	164, 385, 1012, 1397, 1412, 1572
SduI	GDGCHC	3 cut(s)	362, 433, 637
SexAI	ACCWGGT	1 cut(s)	1570
SfaNI	GCATC	7 cut(s)	168, 1111, 1279, 1564, 1807, 1931, 2032
Sfr274I	CTCGAG	2 cut(s)	537, 1600
SfuI	TTCGAA	1 cut(s)	461
SinI	GGWCC	4 cut(s)	109, 398, 895, 1543
SlaI	CTCGAG	2 cut(s)	537, 1600
SmiMI	CAYNNNNRTG	3 cut(s)	164, 1924, 2040
SmlI	CTYRAG	4 cut(s)	537, 749, 950, 1600
SmoI	CTYRAG	4 cut(s)	537, 749, 950, 1600
SphI	GCATGC	1 cut(s)	1512
SsiI	CCGC	7 cut(s)	14, 20, 30, 68, 1447, 1512, 1886
SspMI	CTAG	6 cut(s)	176, 363, 489, 605, 705, 1889
StyD4I	CCNGG	6 cut(s)	162, 383, 1010, 1395, 1410, 1570
StyI	CCWWGG	1 cut(s)	1472
TaaI	ACNGT	5 cut(s)	415, 616, 639, 1160, 1480
TaiI	ACGT	6 cut(s)	8, 117, 200, 204, 685, 2253
TaqI	TCGA	5 cut(s)	461, 538, 1282, 1558, 1601
TatI	WGTACW	3 cut(s)	852, 1668, 2124
TauI	GCSGC	2 cut(s)	33, 1888
TfiI	GAWTC	5 cut(s)	76, 126, 313, 724, 1676
Tru1I	TTAA	5 cut(s)	245, 618, 1079, 1272, 1922
Tru9I	TTAA	5 cut(s)	245, 618, 1079, 1272, 1922
TscAI	CASTG	2 cut(s)	15, 2175
TseFI	GTSAC	6 cut(s)	166, 1136, 1873, 2170, 2244, 2251
TseI	GCWGC	3 cut(s)	944, 980, 992
Tsp45I	GTSAC	6 cut(s)	166, 1136, 1873, 2170, 2244, 2251
TspDTI	ATGAA	8 cut(s)	227, 440, 584, 588, 636, 1419, 1759, 1908
TspGWI	ACGGA	6 cut(s)	51, 57, 185, 231, 1556, 1679
TspRI	CASTG	2 cut(s)	15, 2175
Van91I	CCANNNNNTGG	1 cut(s)	1388
VpaK11BI	GGWCC	4 cut(s)	109, 398, 895, 1543
XapI	RAATTY	2 cut(s)	1112, 1329
XceI	RCATGY	3 cut(s)	853, 884, 1512
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1451, 1470
XhoI	CTCGAG	2 cut(s)	537, 1600
XmiI	GTMKAC	1 cut(s)	533
XmnI	GAANNNNTTC	2 cut(s)	130, 592
XspI	CTAG	6 cut(s)	176, 363, 489, 605, 705, 1889
ZraI	GACGTC	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.