Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004215

Physical Location & Seq

Genomic Coordinates Forward (+)

30949703 .. 30952120

Gene Structure 2418 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ49152

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGGCTTCCATTGCTTCCATTGGCATTGCTATCCTTCTCTTCTCACTATATTCTCTATGTGAAGGAGCTCAACAAAACAACGATTCTAGGCACATACGCCTGGGATCTTCACTCTCTCCAGAAACTCACCCCAGCTCATGGCCTTCTGCCTCTGGCCAGTTCGAATTCGGCTTTTATCAGCAAGGAAGTGGTTTCGCTGTTGGAATTTGGTTGGTGGGAGTAGACCAAAACACAACTGTATGGACAGCAAACCGTGATGATCCCCCACTGCTGCCCTCACAAAATAATACAGTGAAGCTGCAGTTAGCCACTGATGGCAAGCTTGTTCTAAGTAGTGACCAAGGTCATAAAAAAGTAGTCATCGCAAGTGCAACAAACGGTTCTGTTTCCTCTGCCTCCATGCTTGATTCTGGAAACTTCGTTCTTTACGACGAAACCTATAAAGTGATCTGGGAGAGTTTCAATCATCCTACTGATACTATCCTGGGTAATCAGACTCTGCCGGCTGGGGGTCAATTAGTCTCCAGTTTGTCCGATGCTGACCGCTCAACAGGACATTTTCATCTCAACATGCAGCCTGACGGAAACCTTGTTCTGTACCCAGCAAACTCTGAAAACTCTCCGGTAGATGCCTACTATGCTTCAGGTACTAATGGACTCTTGAACCTTCACCTCTATCTTGACAGTACAGATGGCAGTCTTGCTCTAATCAACACCAACAGCTCGGAAGTTTACAGAGTCATCAGTAGCGGTAATGATGATCTAGCCAATAACACTGTATATCGGGCAACTGTTGGCATAAACGGAGTATTAAGGGCGTATTCTCATCAGATGGATCCTAAGACAGGCAAACTTCAAGCACCTGTTATAATGTGGTACCAACCAAATAATCCTTGCGATGTTAAAGGCGTGTGTGGCCTTAACAGCTATTGCACACTCAATGATGACCAGCCAGACTGTCTTTGCCTTCCTGGATCAGATTACGCTGACCTCAACCGCAGGACTATGGGTTGCTTGAGAAACAATCCAGAACCGGCGTGTGTAGCTGGCGGGAAAGAGAATACAACCTTTTATGACATACTCACCATGGAAAATTTGGTCTTGGTAGATCCTCCAGACTTTGAAGCCAGAATGACCATGGAAGAATGCAAGAGCTCTTGTCTAGAGGACTGCAATTGTGGAGCAGCTCTGTTCGAGCAGACAAATTGTATGAAACAGAAGCCACCACTCAGATATGTGAGAAGAGATATGCAGAAATCCAACACTGCTTTCTTCAAGGTAAGCAAGTTAAGAAGAAGTCCTGAAAGCAAAAATAATGGAACTGAAACTAAAGAACCATTTCCGACGAATCCCACTACGGGCGTCATTGTGCAAATTCTTGTTTTAACCTTGGGTCTCATCCTCTACTCATGTGTGTCGCTTGCAATATCTGGATTTTACATTTTCAAAATTCGAATTCTGAGGTACAAAAGGCTGACAGAGATTAATGGGAATCTGGGGCTGGCTGATGAGGAACTCACTATGAGAGTTTTTTCATACAACGAGCTGAAAAGGGCTACAAATGGTTTCAAGCAAGAATTGGGGAAGGGATCCTTTGGAGCAGTTTACAAAGGGGCTCTAAATAGAGGGAAAAAACTCATTGCAGTGAAAAGACTAGAGAAGTTGGTGGAAGAAGGTGAGAGGGAGTTTCGAGCGGAGATGCAAGCAATTGGAAGAACTCATCACAAGAACTTAGTTCGATTGCTGGGTTACTCTGCTGAGGACTCGAAAAGGCTCCTGGTCTATGAATATATGAGCAATGGCTCCCTTGCAGATCTTCTTTTCAAGGCAGAATTGCATCCAGCTTGGGATGAAAGAGTAAGAATTGCAGTTGATGTCGCAAGAGGTCTTCTCTATCTACATCAAGAGTGCAAGTCCCCTATCATTCATTGCGACATAAAGCCTCAAAACATTCTGATGGATGATTTTTGGAATGCAAAAATCGCTGATTTTGGACTTGCAAAACTGCTAATGCCGGATCAAACAAGGACCTTCACAGGGATAAGAGGGACAAGAGGGTATTTGGCACCAGAATGGCAAAAGAACACTCCAATCTCAGTGAAGGCAGATATCTACAGTTTTGGTATAGTGCTTCTTGAACTTGTGTGTTGCAGGAGGAACTTGGACATCAGTGTTCGAGCAGAGGAGATAGTTCTTTCTACTTGGGTTTATAAGTGCTTTGTCAGTAAAGAGCTGCATAAGCTTATTGTGGGTGGCGAAGAAGTGAACAAGAAGAGCTTGGAGAATATGGTTAAGGTGGGATTATGGTGTATACAAGATGAACCAGTTCTGCGTCCATCAATGAAGTCTGTAGTATTGATGTTACAAGGCATTACTGATATATCTATCCCTCCATGTCCAACCACTGCTTCTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

805

Amino Acids

89.21

Weight (kDa)

6.32

Isoelectric Point (pI)

36.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	78 - 167	2e-17	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	523 - 786	4.3e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	524 - 784	5.7e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004215)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23400
prunus_persica	Prupe.6G165300_v2.0.a1 Prupe.6G165500_v2.0.a1 Prupe.6G165500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118691 RchiOBHm_Chr2g0118751 RchiOBHm_Chr2g0118771
rosa_laevigata	RLG00000018420
rosa_multiflora	Rmu_co8322425.1_g000001 Rmu_sc0001814.1_g000023 Rmu_sc0001814.1_g000024 Rmu_sc0001814.1_g000031 Rmu_sc0002831.1_g000032 Rmu_sc0003564.1_g000001 Rmu_sc0004345.1_g000011
rosa_roxburghii	Rroxscaffold_2G00124740 Rroxscaffold_2G00124750 Rroxscaffold_2G00124840 Rroxscaffold_2G00124870 Rroxscaffold_2G00124880 Rroxscaffold_2G00125530
rosa_rugosa	Rorug02G0218500
rosa_samantha	Rh2AG274800 Rh2AG275100 Rh2AG275400 Rh2BG286900 Rh2BG287300 Rh2DG282600 Rh2DG301600 Rh2DG301800
rosa_wichuraiana	Rw2G021860 Rw2G021880 Rw2G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	869, 2211
Acc65I	GGTACC	1 cut(s)	876
AccB1I	GGYRCC	2 cut(s)	876, 2065
AccB7I	CCANNNNNTGG	1 cut(s)	138
AccBSI	CCGCTC	2 cut(s)	546, 1694
AccI	GTMKAC	2 cut(s)	222, 2311
AciI	CCGC	5 cut(s)	544, 750, 997, 1050, 1694
AclWI	GGATC	9 cut(s)	112, 254, 830, 843, 982, 1103, 1584, 1597, 2025
AcoI	YGGCCR	1 cut(s)	154
AcsI	RAATTY	6 cut(s)	164, 204, 1093, 1374, 1449, 1455
AcuI	CTGAAG	1 cut(s)	627
AcyI	GRCGYC	1 cut(s)	1362
AfaI	GTAC	5 cut(s)	599, 649, 688, 878, 1466
AfiI	CCNNNNNNNGG	5 cut(s)	138, 509, 845, 1358, 2037
AgsI	TTSAA	9 cut(s)	463, 664, 857, 1124, 1276, 1447, 1570, 1825, 2138
AjnI	CCWGG	4 cut(s)	99, 483, 970, 1776
AjuI	GAANNNNNNNTTGG	3 cut(s)	1253, 1285, 2392
AloI	GAACNNNNNNTCC	4 cut(s)	405, 437, 576, 608
Alw21I	GWGCWC	2 cut(s)	70, 1157
Alw26I	GTCTC	2 cut(s)	526, 1400
AlwI	GGATC	9 cut(s)	112, 254, 830, 843, 982, 1103, 1584, 1597, 2025
AlwNI	CAGNNNCTG	1 cut(s)	499
AoxI	GGCC	3 cut(s)	140, 154, 916
ApeKI	GCWGC	5 cut(s)	271, 298, 574, 1184, 2233
ApoI	RAATTY	6 cut(s)	164, 204, 1093, 1374, 1449, 1455
AseI	ATTAAT	1 cut(s)	1485
Asp700I	GAANNNNTTC	2 cut(s)	1338, 2325
Asp718I	GGTACC	1 cut(s)	876
AspS9I	GGNCC	1 cut(s)	2028
AsuHPI	GGTGA	4 cut(s)	119, 662, 1075, 1688
AsuII	TTCGAA	2 cut(s)	162, 1453
AvaII	GGWCC	1 cut(s)	2028
BalI	TGGCCA	1 cut(s)	156
BamHI	GGATCC	2 cut(s)	835, 1589
BanI	GGYRCC	2 cut(s)	876, 2065
BanII	GRGCYC	3 cut(s)	70, 1157, 1618
BbsI	GAAGAC	1 cut(s)	1880
Bbv12I	GWGCWC	2 cut(s)	70, 1157
BbvCI	CCTCAGC	1 cut(s)	1758
BbvI	GCAGC	5 cut(s)	258, 285, 586, 1196, 2220
BccI	CCATC	5 cut(s)	308, 686, 826, 1951, 2344
BciT130I	CCWGG	4 cut(s)	101, 485, 972, 1778
BcoDI	GTCTC	2 cut(s)	526, 1400
BfaI	CTAG	4 cut(s)	87, 764, 1163, 1655
BfmI	CTRYAG	3 cut(s)	299, 2113, 2349
BglII	AGATCT	1 cut(s)	1813
BisI	GCNGC	5 cut(s)	272, 299, 575, 1185, 2234
BlsI	GCNGC	5 cut(s)	273, 300, 576, 1186, 2235
Bme1390I	CCNGG	4 cut(s)	101, 485, 972, 1778
Bme18I	GGWCC	1 cut(s)	2028
BmgT120I	GGNCC	1 cut(s)	2028
BmiI	GGNNCC	6 cut(s)	837, 878, 1591, 1775, 1804, 2067
BmrFI	CCNGG	4 cut(s)	101, 485, 972, 1778
BmsI	GCATC	4 cut(s)	526, 619, 1689, 1846
BoxI	GACNNNNGTC	1 cut(s)	342
BpiI	GAAGAC	1 cut(s)	1880
BplI	GAGNNNNNCTC	2 cut(s)	1875, 1907
BpmI	CTGGAG	3 cut(s)	102, 508, 1098
Bpu10I	CCTNAGC	1 cut(s)	1758
Bpu14I	TTCGAA	2 cut(s)	162, 1453
BpuEI	CTTGAG	1 cut(s)	1036
BsaHI	GRCGYC	1 cut(s)	1362
BsaI	GGTCTC	1 cut(s)	1400
BsaJI	CCNNGG	6 cut(s)	100, 340, 484, 1086, 1137, 1389
BsaWI	WCCGGW	1 cut(s)	622
Bsc4I	CCNNNNNNNGG	5 cut(s)	138, 509, 845, 1358, 2037
Bse118I	RCCGGY	2 cut(s)	502, 1033
Bse1I	ACTGG	3 cut(s)	157, 525, 2324
Bse3DI	GCAATG	5 cut(s)	9, 24, 1638, 1804, 1927
BseBI	CCWGG	4 cut(s)	101, 485, 972, 1778
BseDI	CCNNGG	6 cut(s)	100, 340, 484, 1086, 1137, 1389
BseGI	GGATG	5 cut(s)	466, 1398, 1837, 1855, 1966
BseLI	CCNNNNNNNGG	5 cut(s)	138, 509, 845, 1358, 2037
BseMI	GCAATG	5 cut(s)	9, 24, 1638, 1804, 1927
BseMII	CTCAG	4 cut(s)	1243, 1451, 1749, 2109
BseNI	ACTGG	3 cut(s)	157, 525, 2324
BseRI	GAGGAG	1 cut(s)	2198
BseXI	GCAGC	5 cut(s)	258, 285, 586, 1196, 2220
BseYI	CCCAGC	4 cut(s)	131, 506, 601, 1744
BshFI	GGCC	3 cut(s)	142, 156, 918
BshNI	GGYRCC	2 cut(s)	876, 2065
BsiHKAI	GWGCWC	2 cut(s)	70, 1157
BsiSI	CCGG	4 cut(s)	503, 623, 1034, 2015
BslFI	GGGAC	2 cut(s)	1900, 2062
BslI	CCNNNNNNNGG	5 cut(s)	138, 509, 845, 1358, 2037
BsmAI	GTCTC	2 cut(s)	526, 1400
BsmFI	GGGAC	2 cut(s)	1900, 2062
BsmI	GAATGC	2 cut(s)	1151, 1978
BsnI	GGCC	3 cut(s)	142, 156, 918
Bso31I	GGTCTC	1 cut(s)	1400
Bsp119I	TTCGAA	2 cut(s)	162, 1453
Bsp1286I	GDGCHC	3 cut(s)	70, 1157, 1618
Bsp19I	CCATGG	2 cut(s)	1086, 1137
BspACI	CCGC	5 cut(s)	544, 750, 997, 1050, 1694
BspANI	GGCC	3 cut(s)	142, 156, 918
BspCNI	CTCAG	4 cut(s)	1242, 1452, 1750, 2108
BspLI	GGNNCC	6 cut(s)	837, 878, 1591, 1775, 1804, 2067
BspMAI	CTGCAG	1 cut(s)	303
BspPI	GGATC	9 cut(s)	112, 254, 830, 843, 982, 1103, 1584, 1597, 2025
BspQI	GCTCTTC	1 cut(s)	2267
BspT104I	TTCGAA	2 cut(s)	162, 1453
BspT107I	GGYRCC	2 cut(s)	876, 2065
BspTNI	GGTCTC	1 cut(s)	1400
BsrBI	CCGCTC	2 cut(s)	546, 1694
BsrDI	GCAATG	5 cut(s)	9, 24, 1638, 1804, 1927
BsrFI	RCCGGY	2 cut(s)	502, 1033
BsrI	ACTGG	3 cut(s)	157, 525, 2324
BssAI	RCCGGY	2 cut(s)	502, 1033
BssECI	CCNNGG	6 cut(s)	100, 340, 484, 1086, 1137, 1389
BssNAI	GTATAC	1 cut(s)	2312
BssNI	GRCGYC	1 cut(s)	1362
BssT1I	CCWWGG	4 cut(s)	340, 1086, 1137, 1389
Bst1107I	GTATAC	1 cut(s)	2312
Bst2UI	CCWGG	4 cut(s)	101, 485, 972, 1778
Bst4CI	ACNGT	9 cut(s)	238, 254, 292, 380, 686, 778, 793, 959, 2117
Bst6I	CTCTTC	3 cut(s)	44, 1237, 2267
BstACI	GRCGYC	1 cut(s)	1362
BstBI	TTCGAA	2 cut(s)	162, 1453
BstC8I	GCNNGC	6 cut(s)	320, 504, 1048, 1422, 1503, 1704
BstDEI	CTNAG	7 cut(s)	329, 840, 1229, 1460, 1732, 1758, 2095
BstDSI	CCRYGG	2 cut(s)	1086, 1137
BstENI	CCTNNNNNAGG	1 cut(s)	843
BstF5I	GGATG	5 cut(s)	466, 1398, 1837, 1855, 1966
BstMAI	GTCTC	2 cut(s)	526, 1400
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 638, 915, 924, 1043, 1982, 2239
BstNI	CCWGG	4 cut(s)	101, 485, 972, 1778
BstNSI	RCATGY	1 cut(s)	574
BstPAI	GACNNNNGTC	1 cut(s)	342
BstSCI	CCNGG	4 cut(s)	99, 483, 970, 1776
BstSFI	CTRYAG	3 cut(s)	299, 2113, 2349
BstV1I	GCAGC	5 cut(s)	258, 285, 586, 1196, 2220
BstV2I	GAAGAC	1 cut(s)	1880
BstX2I	RGATCY	5 cut(s)	104, 835, 1108, 1589, 1813
BstYI	RGATCY	5 cut(s)	104, 835, 1108, 1589, 1813
BstZ17I	GTATAC	1 cut(s)	2312
BsuRI	GGCC	3 cut(s)	142, 156, 918
BtgI	CCRYGG	2 cut(s)	1086, 1137
BtgZI	GCGATG	2 cut(s)	346, 912
BtsCI	GGATG	5 cut(s)	466, 1398, 1837, 1855, 1966
BtsI	GCAGTG	4 cut(s)	266, 1263, 1650, 2403
BtsIMutI	CAGTG	9 cut(s)	266, 297, 309, 774, 1263, 1650, 2103, 2176, 2403
Cac8I	GCNNGC	6 cut(s)	320, 504, 1048, 1422, 1503, 1704
CaiI	CAGNNNCTG	1 cut(s)	499
Cfr10I	RCCGGY	2 cut(s)	502, 1033
Cfr13I	GGNCC	1 cut(s)	2028
CseI	GACGC	2 cut(s)	1351, 2321
Csp6I	GTAC	5 cut(s)	598, 648, 687, 877, 1465
CviAII	CATG	7 cut(s)	138, 400, 571, 1087, 1138, 1410, 2394
CviQI	GTAC	5 cut(s)	598, 648, 687, 877, 1465
DdeI	CTNAG	7 cut(s)	329, 840, 1229, 1460, 1732, 1758, 2095
EaeI	YGGCCR	1 cut(s)	154
Eam1104I	CTCTTC	3 cut(s)	44, 1237, 2267
EarI	CTCTTC	3 cut(s)	44, 1237, 2267
Ecl136II	GAGCTC	2 cut(s)	68, 1155
Eco130I	CCWWGG	4 cut(s)	340, 1086, 1137, 1389
Eco24I	GRGCYC	3 cut(s)	70, 1157, 1618
Eco31I	GGTCTC	1 cut(s)	1400
Eco32I	GATATC	1 cut(s)	2110
Eco47I	GGWCC	1 cut(s)	2028
Eco53kI	GAGCTC	2 cut(s)	68, 1155
Eco57I	CTGAAG	1 cut(s)	627
EcoICRI	GAGCTC	2 cut(s)	68, 1155
EcoNI	CCTNNNNNAGG	1 cut(s)	843
EcoO109I	RGGNCCY	1 cut(s)	2028
EcoRI	GAATTC	2 cut(s)	164, 1455
EcoRII	CCWGG	4 cut(s)	99, 483, 970, 1776
EcoRV	GATATC	1 cut(s)	2110
EcoT14I	CCWWGG	4 cut(s)	340, 1086, 1137, 1389
EcoT38I	GRGCYC	3 cut(s)	70, 1157, 1618
ErhI	CCWWGG	4 cut(s)	340, 1086, 1137, 1389
FaeI	CATG	7 cut(s)	141, 403, 574, 1090, 1141, 1413, 2397
FalI	AAGNNNNNCTT	4 cut(s)	1577, 1609, 2261, 2293
FaqI	GGGAC	2 cut(s)	1900, 2062
FatI	CATG	7 cut(s)	137, 399, 570, 1086, 1137, 1409, 2393
FauI	CCCGC	1 cut(s)	1043
FblI	GTMKAC	2 cut(s)	222, 2311
Fnu4HI	GCNGC	5 cut(s)	272, 299, 575, 1185, 2234
FokI	GGATG	5 cut(s)	453, 1385, 1824, 1862, 1973
FriOI	GRGCYC	3 cut(s)	70, 1157, 1618
Fsp4HI	GCNGC	5 cut(s)	272, 299, 575, 1185, 2234
FspBI	CTAG	4 cut(s)	87, 764, 1163, 1655
GluI	GCNGC	5 cut(s)	272, 299, 575, 1185, 2234
GsaI	CCCAGC	4 cut(s)	135, 510, 605, 1748
GsuI	CTGGAG	3 cut(s)	102, 508, 1098
HaeIII	GGCC	3 cut(s)	142, 156, 918
HapII	CCGG	4 cut(s)	503, 623, 1034, 2015
HgaI	GACGC	2 cut(s)	1351, 2321
Hin1I	GRCGYC	1 cut(s)	1362
Hin1II	CATG	7 cut(s)	141, 403, 574, 1090, 1141, 1413, 2397
HindIII	AAGCTT	2 cut(s)	320, 2240
HinfI	GANTC	8 cut(s)	83, 407, 496, 657, 738, 1348, 1492, 1763
HpaII	CCGG	4 cut(s)	503, 623, 1034, 2015
HphI	GGTGA	4 cut(s)	119, 662, 1075, 1688
Hpy166II	GTNNAC	5 cut(s)	223, 733, 1606, 2266, 2312
Hpy8I	GTNNAC	5 cut(s)	223, 733, 1606, 2266, 2312
Hpy99I	CGWCG	2 cut(s)	434, 1348
HpyAV	CCTTC	9 cut(s)	44, 56, 153, 677, 977, 1579, 1667, 2041, 2095
HpyCH4III	ACNGT	9 cut(s)	238, 254, 292, 380, 686, 778, 793, 959, 2117
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 638, 915, 924, 1043, 1982, 2239
HpyF3I	CTNAG	7 cut(s)	329, 840, 1229, 1460, 1732, 1758, 2095
Hsp92I	GRCGYC	1 cut(s)	1362
Hsp92II	CATG	7 cut(s)	141, 403, 574, 1090, 1141, 1413, 2397
KpnI	GGTACC	1 cut(s)	880
KroI	GCCGGC	1 cut(s)	502
KroNI	GCCGGC	1 cut(s)	504
LguI	GCTCTTC	1 cut(s)	2267
LmnI	GCTCC	5 cut(s)	65, 1181, 1598, 1779, 1808
Lsp1109I	GCAGC	5 cut(s)	258, 285, 586, 1196, 2220
LweI	GCATC	4 cut(s)	526, 619, 1689, 1846
MaeI	CTAG	4 cut(s)	87, 764, 1163, 1655
MaeIII	GTNAC	3 cut(s)	335, 1748, 2361
MbiI	CCGCTC	2 cut(s)	546, 1694
MfeI	CAATTG	2 cut(s)	1174, 1707
MflI	RGATCY	5 cut(s)	104, 835, 1108, 1589, 1813
MhlI	GDGCHC	3 cut(s)	70, 1157, 1618
MlsI	TGGCCA	1 cut(s)	156
MluNI	TGGCCA	1 cut(s)	156
MlyI	GAGTC	4 cut(s)	490, 651, 747, 1757
MmeI	TCCRAC	3 cut(s)	181, 1284, 1367
Mox20I	TGGCCA	1 cut(s)	156
MroNI	GCCGGC	1 cut(s)	502
MroXI	GAANNNNTTC	2 cut(s)	1338, 2325
MscI	TGGCCA	1 cut(s)	156
MseI	TTAA	7 cut(s)	812, 903, 921, 1289, 1385, 1485, 2292
MslI	CAYNNNNRTG	3 cut(s)	1643, 1955, 2071
Msp20I	TGGCCA	1 cut(s)	156
MspI	CCGG	4 cut(s)	503, 623, 1034, 2015
MspR9I	CCNGG	4 cut(s)	101, 485, 972, 1778
MunI	CAATTG	2 cut(s)	1174, 1707
Mva1269I	GAATGC	2 cut(s)	1151, 1978
MvaI	CCWGG	4 cut(s)	101, 485, 972, 1778
MwoI	GCNNNNNNNGC	7 cut(s)	11, 638, 915, 924, 1043, 1982, 2239
NaeI	GCCGGC	1 cut(s)	504
NcoI	CCATGG	2 cut(s)	1086, 1137
NgoMIV	GCCGGC	1 cut(s)	502
NlaIII	CATG	7 cut(s)	141, 403, 574, 1090, 1141, 1413, 2397
NlaIV	GGNNCC	6 cut(s)	837, 878, 1591, 1775, 1804, 2067
NmuCI	GTSAC	1 cut(s)	335
NspI	RCATGY	1 cut(s)	574
NspV	TTCGAA	2 cut(s)	162, 1453
PciSI	GCTCTTC	1 cut(s)	2267
PcsI	WCGNNNNNNNCGW	1 cut(s)	426
PctI	GAATGC	2 cut(s)	1151, 1978
PdiI	GCCGGC	1 cut(s)	504
PdmI	GAANNNNTTC	2 cut(s)	1338, 2325
PfeI	GAWTC	4 cut(s)	83, 407, 1348, 1492
PflMI	CCANNNNNTGG	1 cut(s)	138
PfoI	TCCNGGA	1 cut(s)	970
PkrI	GCNGC	5 cut(s)	273, 300, 576, 1186, 2235
PleI	GAGTC	4 cut(s)	490, 651, 746, 1757
PpsI	GAGTC	4 cut(s)	490, 651, 746, 1757
PpuMI	RGGWCCY	1 cut(s)	2028
PshAI	GACNNNNGTC	1 cut(s)	342
PshBI	ATTAAT	1 cut(s)	1485
PsiI	TTATAA	2 cut(s)	869, 2211
Psp124BI	GAGCTC	2 cut(s)	70, 1157
Psp5II	RGGWCCY	1 cut(s)	2028
Psp6I	CCWGG	4 cut(s)	99, 483, 970, 1776
PspFI	CCCAGC	4 cut(s)	131, 506, 601, 1744
PspGI	CCWGG	4 cut(s)	99, 483, 970, 1776
PspN4I	GGNNCC	6 cut(s)	837, 878, 1591, 1775, 1804, 2067
PspPI	GGNCC	1 cut(s)	2028
PspPPI	RGGWCCY	1 cut(s)	2028
PstI	CTGCAG	1 cut(s)	303
PstNI	CAGNNNCTG	1 cut(s)	499
PsuI	RGATCY	5 cut(s)	104, 835, 1108, 1589, 1813
RsaI	GTAC	5 cut(s)	599, 649, 688, 878, 1466
RsaNI	GTAC	5 cut(s)	598, 648, 687, 877, 1465
RseI	CAYNNNNRTG	3 cut(s)	1643, 1955, 2071
SacI	GAGCTC	2 cut(s)	70, 1157
SapI	GCTCTTC	1 cut(s)	2267
SaqAI	TTAA	7 cut(s)	812, 903, 921, 1289, 1385, 1485, 2292
SatI	GCNGC	5 cut(s)	272, 299, 575, 1185, 2234
Sau96I	GGNCC	1 cut(s)	2028
SchI	GAGTC	4 cut(s)	490, 651, 747, 1757
ScrFI	CCNGG	4 cut(s)	101, 485, 972, 1778
SduI	GDGCHC	3 cut(s)	70, 1157, 1618
SfaNI	GCATC	4 cut(s)	526, 619, 1689, 1846
SfcI	CTRYAG	3 cut(s)	299, 2113, 2349
SfuI	TTCGAA	2 cut(s)	162, 1453
SinI	GGWCC	1 cut(s)	2028
SmiMI	CAYNNNNRTG	3 cut(s)	1643, 1955, 2071
SmlI	CTYRAG	1 cut(s)	1015
SmoI	CTYRAG	1 cut(s)	1015
SsiI	CCGC	5 cut(s)	544, 750, 997, 1050, 1694
SspMI	CTAG	4 cut(s)	87, 764, 1163, 1655
SstI	GAGCTC	2 cut(s)	70, 1157
StyD4I	CCNGG	4 cut(s)	99, 483, 970, 1776
StyI	CCWWGG	4 cut(s)	340, 1086, 1137, 1389
TaaI	ACNGT	9 cut(s)	238, 254, 292, 380, 686, 778, 793, 959, 2117
TaqI	TCGA	7 cut(s)	162, 1194, 1453, 1690, 1738, 1766, 2176
TatI	WGTACW	1 cut(s)	686
TfiI	GAWTC	4 cut(s)	83, 407, 1348, 1492
Tru1I	TTAA	7 cut(s)	812, 903, 921, 1289, 1385, 1485, 2292
Tru9I	TTAA	7 cut(s)	812, 903, 921, 1289, 1385, 1485, 2292
TscAI	CASTG	9 cut(s)	273, 297, 316, 781, 1270, 1650, 2103, 2176, 2410
TseFI	GTSAC	1 cut(s)	335
TseI	GCWGC	5 cut(s)	271, 298, 574, 1184, 2233
Tsp45I	GTSAC	1 cut(s)	335
TspDTI	ATGAA	8 cut(s)	551, 1226, 1524, 1800, 1866, 1916, 2334, 2357
TspGWI	ACGGA	2 cut(s)	597, 819
TspRI	CASTG	9 cut(s)	273, 297, 316, 781, 1270, 1650, 2103, 2176, 2410
Van91I	CCANNNNNTGG	1 cut(s)	138
VpaK11BI	GGWCC	1 cut(s)	2028
VspI	ATTAAT	1 cut(s)	1485
XagI	CCTNNNNNAGG	1 cut(s)	843
XapI	RAATTY	6 cut(s)	164, 204, 1093, 1374, 1449, 1455
XbaI	TCTAGA	1 cut(s)	1162
XceI	RCATGY	1 cut(s)	574
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1093, 1135
XmiI	GTMKAC	2 cut(s)	222, 2311
XmnI	GAANNNNTTC	2 cut(s)	1338, 2325
XspI	CTAG	4 cut(s)	87, 764, 1163, 1655

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.