Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001814.1

Orthogroup ID

OG0004215

Physical Location & Seq

Genomic Coordinates Reverse (-)

126522 .. 128924

Gene Structure 2403 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001814.1_g000024.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

atggcttccattggcattgctatccttctcttctcactacattctctctgtgaaggagctcagcaaaacaacgattcttggaacatacgcctgggatcttcagtctttccagaaactcaccccagctcatggccttctgcctctggcctgtttgaattcggcttttatcagcaaggaaatggttttgcagttggaatttggttggtgggagtagatggaaacacaactgtatggacagcaaaccgtgatgatcccccactgctgccctcaccaaataatacagtgcagctgcatttagccactgatggcaagcttgttctaacgagtgaccaaggtcataaaaaagtagtcatcgcaagtgcaacaaacggttctgtttcctctgcctccatgcgtgattctggaaacttcgttctttacgacgaaaactataaagtgatctgggagagtttcagtcatcctactgataccatcctgggtggtcagactctgccggctgggggtcaattagtctccagtttgtccgatgctgaccactcaacaggacattttcatctcaacatgcagactgacggaaaccttgttctctacccagcaaactctgaaaactctccgatagatgcctactatgctacacatacttggaggaacttgacgcttaatctccatcttaatagtacagatggcggtcttgctctaatcaacaccaccagctcggaagtcatcagtgacggtaatgatgacctagccaataacaatgtatatcgggcaactgttggcataaacggagtattaagggtgtattctcatcagatggatcctgccaaacgcaaactccaagcaccttttattttgtggtccaaaccagatgatccttgcgatgttaaaggtgtgtgtggccttaacagctattgcacactcaatgatggccaaccagactgtctttgccttcctggatcagattacgctgacctcaacggcaggactatgggttgcttgagaaactattcagaaccggcgtgtgcagctggcgggaaagaggatacaaccttttatgacatagtcaccatggaaaatatggactgggtagatactcctgactttgaagccacaatgaccatagaagaatgcaagaggtcttgtctagaggactgcaattgtggagcagctctgttcgagcagacaaagtgtatgaaacaaaagccaccactcagatatgtgagaagagatctggcgaaatccaacatagctttcttcaaggtgagcaacttaacaagaagccctgaaagcaagaataatggaactgaaactaaagaacccactacggttgttatccgaagcaagaaagtcattgtgcaaattcttgttttaaccttgggtctcatcctcttctcatgtgttgcgcttgcaatatctggattttacattttcaaaattcgagttctgaggtacaaaaggctgacagaggttaatgggaatctggggctggctgatgaggaactcactatgagagttttttcatacaacgagctgaaaagggctacaaatggtttcaagcaagaattggggaagggctccttcggagcagtttacaaaggggctctaaatagagggaaaaaactcattgcagtgaaaagactagagaagttggtggaagaaggtgacagggagtttcgagcggagatgcaagcaattggaagaactcatcacaagaacttagttcggttgctgggttactctgctgaggactcgaaaaggctcctggtctatgaatatatgagcaatggctcccttgcagatcttcttttcaaggcagaattgcatccaccttgggatgaaagagtgagaattgcagttgatgtcgcaagaggtcttctctatctacatgaagagtgcaagtcccctgtcattcattgcgacataaagcctcaaaacattctgatggatgaattttggaatgcaaaaatctctgattttgggcttgcaaaactgctaatgccggatcaaacaaggaccttcacagggataagagggacaagagggtatttggcaccagaatggcaaaagaacactccaatatcagtaaaggcagatatctacagttttggtatagtgcttcttgaacttgtgtgttgcaggaggaacttggacgtcagtgttagagcagaggagatagttctttctacttggatttataagtgctttgtcagtagagagctacataagcttattgtgggtggcgaagaagtgaataagaagagcttcgagaatatggttaaggtgggattatggtgtatacaagatgaaccagctctgcgtccatcaatgaagtctgtagtattgatgttacaaggcattactgatatatctatccctccctgtccaaccactacttctatgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

800

Amino Acids

88.76

Weight (kDa)

6.14

Isoelectric Point (pI)

37.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004215)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23400
prunus_persica	Prupe.6G165300_v2.0.a1 Prupe.6G165500_v2.0.a1 Prupe.6G165500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118691 RchiOBHm_Chr2g0118751 RchiOBHm_Chr2g0118771
rosa_laevigata	RLG00000018420
rosa_multiflora	Rmu_co8322425.1_g000001 Rmu_sc0001814.1_g000023 Rmu_sc0001814.1_g000024 Rmu_sc0001814.1_g000031 Rmu_sc0002831.1_g000032 Rmu_sc0003564.1_g000001 Rmu_sc0004345.1_g000011
rosa_roxburghii	Rroxscaffold_2G00124740 Rroxscaffold_2G00124750 Rroxscaffold_2G00124840 Rroxscaffold_2G00124870 Rroxscaffold_2G00124880 Rroxscaffold_2G00125530
rosa_rugosa	Rorug02G0218500
rosa_samantha	Rh2AG274800 Rh2AG275100 Rh2AG275400 Rh2BG286900 Rh2BG287300 Rh2DG282600 Rh2DG301600 Rh2DG301800
rosa_wichuraiana	Rw2G021860 Rw2G021880 Rw2G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2196
AatII	GACGTC	1 cut(s)	2154
AccB1I	GGYRCC	1 cut(s)	2050
AccB7I	CCANNNNNTGG	1 cut(s)	129
AccBSI	CCGCTC	1 cut(s)	1679
AccI	GTMKAC	1 cut(s)	2296
AciI	CCGC	3 cut(s)	687, 1032, 1679
AclWI	GGATC	7 cut(s)	103, 245, 812, 825, 866, 964, 2010
AcoI	YGGCCR	1 cut(s)	928
AcsI	RAATTY	5 cut(s)	155, 195, 1359, 1434, 1949
AcuI	CTGAAG	1 cut(s)	84
AcyI	GRCGYC	1 cut(s)	2151
AfaI	GTAC	2 cut(s)	679, 1451
AfiI	CCNNNNNNNGG	3 cut(s)	129, 500, 2022
AgsI	TTSAA	7 cut(s)	155, 1106, 1258, 1432, 1555, 1810, 2123
AjnI	CCWGG	4 cut(s)	90, 474, 952, 1761
AjuI	GAANNNNNNNTTGG	3 cut(s)	1235, 1267, 2377
AloI	GAACNNNNNNTCC	4 cut(s)	396, 428, 567, 599
Alw21I	GWGCWC	1 cut(s)	61
Alw26I	GTCTC	2 cut(s)	517, 1385
AlwI	GGATC	7 cut(s)	103, 245, 812, 825, 866, 964, 2010
AlwNI	CAGNNNCTG	1 cut(s)	490
AoxI	GGCC	4 cut(s)	131, 145, 898, 928
ApeKI	GCWGC	5 cut(s)	262, 286, 289, 1025, 1166
ApoI	RAATTY	5 cut(s)	155, 195, 1359, 1434, 1949
Asp700I	GAANNNNTTC	2 cut(s)	1006, 2261
AspLEI	GCGC	1 cut(s)	1405
AspS9I	GGNCC	2 cut(s)	858, 2013
AsuHPI	GGTGA	5 cut(s)	110, 261, 1057, 1273, 1673
AvaII	GGWCC	2 cut(s)	858, 2013
BalI	TGGCCA	1 cut(s)	930
BamHI	GGATCC	1 cut(s)	817
BanI	GGYRCC	1 cut(s)	2050
BanII	GRGCYC	3 cut(s)	61, 1577, 1603
BbsI	GAAGAC	1 cut(s)	1865
Bbv12I	GWGCWC	1 cut(s)	61
BbvCI	CCTCAGC	1 cut(s)	1743
BbvI	GCAGC	5 cut(s)	249, 276, 298, 1037, 1178
BccI	CCATC	9 cut(s)	209, 299, 479, 675, 677, 808, 920, 1936, 2329
BceAI	ACGGC	1 cut(s)	994
BciT130I	CCWGG	4 cut(s)	92, 476, 954, 1763
BciVI	GTATCC	1 cut(s)	1036
BcoDI	GTCTC	2 cut(s)	517, 1385
BfaI	CTAG	3 cut(s)	746, 1145, 1640
BfmI	CTRYAG	2 cut(s)	2098, 2334
BfuI	GTATCC	1 cut(s)	1036
BglII	AGATCT	2 cut(s)	1228, 1798
BisI	GCNGC	5 cut(s)	263, 287, 290, 1026, 1167
BlpI	GCTNAGC	1 cut(s)	60
BlsI	GCNGC	5 cut(s)	264, 288, 291, 1027, 1168
Bme1390I	CCNGG	4 cut(s)	92, 476, 954, 1763
Bme18I	GGWCC	2 cut(s)	858, 2013
BmgT120I	GGNCC	2 cut(s)	858, 2013
BmiI	GGNNCC	5 cut(s)	819, 1576, 1760, 1789, 2052
BmrFI	CCNGG	4 cut(s)	92, 476, 954, 1763
BmrI	ACTGGG	1 cut(s)	1093
BmsI	GCATC	4 cut(s)	517, 610, 1674, 1831
BmuI	ACTGGG	1 cut(s)	1093
BoxI	GACNNNNGTC	1 cut(s)	333
BpiI	GAAGAC	1 cut(s)	1865
BplI	GAGNNNNNCTC	2 cut(s)	1860, 1892
BpmI	CTGGAG	1 cut(s)	499
Bpu10I	CCTNAGC	1 cut(s)	1743
Bpu1102I	GCTNAGC	1 cut(s)	60
BpuEI	CTTGAG	1 cut(s)	1018
BsaHI	GRCGYC	1 cut(s)	2151
BsaI	GGTCTC	1 cut(s)	1385
BsaJI	CCNNGG	6 cut(s)	91, 331, 475, 1068, 1374, 1829
BsaXI	ACNNNNNCTCC	2 cut(s)	819, 849
Bsc4I	CCNNNNNNNGG	3 cut(s)	129, 500, 2022
Bse118I	RCCGGY	2 cut(s)	493, 1015
Bse1I	ACTGG	2 cut(s)	516, 1088
Bse3DI	GCAATG	4 cut(s)	15, 1623, 1789, 1912
BseBI	CCWGG	4 cut(s)	92, 476, 954, 1763
BseDI	CCNNGG	6 cut(s)	91, 331, 475, 1068, 1374, 1829
BseGI	GGATG	6 cut(s)	457, 471, 1383, 1822, 1840, 1951
BseLI	CCNNNNNNNGG	3 cut(s)	129, 500, 2022
BseMI	GCAATG	4 cut(s)	15, 1623, 1789, 1912
BseMII	CTCAG	4 cut(s)	74, 1225, 1436, 1734
BseNI	ACTGG	2 cut(s)	516, 1088
BseRI	GAGGAG	1 cut(s)	2183
BseXI	GCAGC	5 cut(s)	249, 276, 298, 1037, 1178
BseYI	CCCAGC	4 cut(s)	122, 497, 592, 1729
BsgI	GTGCAG	2 cut(s)	305, 1044
BshFI	GGCC	4 cut(s)	133, 147, 900, 930
BshNI	GGYRCC	1 cut(s)	2050
BsiHKAI	GWGCWC	1 cut(s)	61
BsiSI	CCGG	3 cut(s)	494, 1016, 2000
BslFI	GGGAC	2 cut(s)	1885, 2047
BslI	CCNNNNNNNGG	3 cut(s)	129, 500, 2022
BsmAI	GTCTC	2 cut(s)	517, 1385
BsmFI	GGGAC	2 cut(s)	1885, 2047
BsmI	GAATGC	2 cut(s)	1133, 1963
BsnI	GGCC	4 cut(s)	133, 147, 900, 930
Bso31I	GGTCTC	1 cut(s)	1385
Bsp1286I	GDGCHC	3 cut(s)	61, 1577, 1603
Bsp143I	GATC	9 cut(s)	95, 250, 438, 817, 871, 956, 1228, 1798, 2002
Bsp1720I	GCTNAGC	1 cut(s)	60
Bsp19I	CCATGG	1 cut(s)	1068
BspACI	CCGC	3 cut(s)	687, 1032, 1679
BspANI	GGCC	4 cut(s)	133, 147, 900, 930
BspCNI	CTCAG	4 cut(s)	73, 1224, 1437, 1735
BspLI	GGNNCC	5 cut(s)	819, 1576, 1760, 1789, 2052
BspPI	GGATC	7 cut(s)	103, 245, 812, 825, 866, 964, 2010
BspQI	GCTCTTC	1 cut(s)	2252
BspT107I	GGYRCC	1 cut(s)	2050
BspTNI	GGTCTC	1 cut(s)	1385
BsrBI	CCGCTC	1 cut(s)	1679
BsrDI	GCAATG	4 cut(s)	15, 1623, 1789, 1912
BsrFI	RCCGGY	2 cut(s)	493, 1015
BsrI	ACTGG	2 cut(s)	516, 1088
BssAI	RCCGGY	2 cut(s)	493, 1015
BssECI	CCNNGG	6 cut(s)	91, 331, 475, 1068, 1374, 1829
BssMI	GATC	9 cut(s)	95, 250, 438, 817, 871, 956, 1228, 1798, 2002
BssNAI	GTATAC	1 cut(s)	2297
BssNI	GRCGYC	1 cut(s)	2151
BssT1I	CCWWGG	4 cut(s)	331, 1068, 1374, 1829
Bst1107I	GTATAC	1 cut(s)	2297
Bst2UI	CCWGG	4 cut(s)	92, 476, 954, 1763
Bst4CI	ACNGT	9 cut(s)	229, 245, 283, 371, 734, 775, 941, 1327, 2102
Bst6I	CTCTTC	5 cut(s)	35, 1219, 1394, 1884, 2252
BstACI	GRCGYC	1 cut(s)	2151
BstC8I	GCNNGC	7 cut(s)	311, 495, 1030, 1407, 1488, 1689, 1983
BstDEI	CTNAG	5 cut(s)	60, 1211, 1445, 1717, 1743
BstDSI	CCRYGG	1 cut(s)	1068
BstF5I	GGATG	6 cut(s)	457, 471, 1383, 1822, 1840, 1951
BstHHI	GCGC	1 cut(s)	1405
BstKTI	GATC	9 cut(s)	98, 253, 441, 820, 874, 959, 1231, 1801, 2005
BstMAI	GTCTC	2 cut(s)	517, 1385
BstMBI	GATC	9 cut(s)	95, 250, 438, 817, 871, 956, 1228, 1798, 2002
BstMWI	GCNNNNNNNGC	5 cut(s)	629, 906, 1025, 1287, 2224
BstNI	CCWGG	4 cut(s)	92, 476, 954, 1763
BstNSI	RCATGY	1 cut(s)	565
BstPAI	GACNNNNGTC	1 cut(s)	333
BstSCI	CCNGG	4 cut(s)	90, 474, 952, 1761
BstSFI	CTRYAG	2 cut(s)	2098, 2334
BstV1I	GCAGC	5 cut(s)	249, 276, 298, 1037, 1178
BstV2I	GAAGAC	1 cut(s)	1865
BstX2I	RGATCY	4 cut(s)	95, 817, 1228, 1798
BstYI	RGATCY	4 cut(s)	95, 817, 1228, 1798
BstZ17I	GTATAC	1 cut(s)	2297
BsuI	GTATCC	1 cut(s)	1036
BsuRI	GGCC	4 cut(s)	133, 147, 900, 930
BtgI	CCRYGG	1 cut(s)	1068
BtgZI	GCGATG	2 cut(s)	337, 894
BtsCI	GGATG	6 cut(s)	457, 471, 1383, 1822, 1840, 1951
BtsI	GCAGTG	2 cut(s)	257, 1635
BtsIMutI	CAGTG	6 cut(s)	257, 288, 300, 733, 1635, 2161
Cac8I	GCNNGC	7 cut(s)	311, 495, 1030, 1407, 1488, 1689, 1983
CaiI	CAGNNNCTG	1 cut(s)	490
CfoI	GCGC	1 cut(s)	1405
Cfr10I	RCCGGY	2 cut(s)	493, 1015
Cfr13I	GGNCC	2 cut(s)	858, 2013
CseI	GACGC	2 cut(s)	664, 2306
Csp6I	GTAC	2 cut(s)	678, 1450
CspCI	CAANNNNNGTGG	2 cut(s)	1309, 1344
CviAII	CATG	6 cut(s)	129, 391, 562, 1069, 1395, 1886
CviQI	GTAC	2 cut(s)	678, 1450
DdeI	CTNAG	5 cut(s)	60, 1211, 1445, 1717, 1743
DpnI	GATC	9 cut(s)	97, 252, 440, 819, 873, 958, 1230, 1800, 2004
DpnII	GATC	9 cut(s)	95, 250, 438, 817, 871, 956, 1228, 1798, 2002
EaeI	YGGCCR	1 cut(s)	928
Eam1104I	CTCTTC	5 cut(s)	35, 1219, 1394, 1884, 2252
EarI	CTCTTC	5 cut(s)	35, 1219, 1394, 1884, 2252
Ecl136II	GAGCTC	1 cut(s)	59
Eco130I	CCWWGG	4 cut(s)	331, 1068, 1374, 1829
Eco24I	GRGCYC	3 cut(s)	61, 1577, 1603
Eco31I	GGTCTC	1 cut(s)	1385
Eco32I	GATATC	1 cut(s)	2095
Eco47I	GGWCC	2 cut(s)	858, 2013
Eco53kI	GAGCTC	1 cut(s)	59
Eco57I	CTGAAG	1 cut(s)	84
EcoICRI	GAGCTC	1 cut(s)	59
EcoO109I	RGGNCCY	1 cut(s)	2013
EcoRI	GAATTC	1 cut(s)	155
EcoRII	CCWGG	4 cut(s)	90, 474, 952, 1761
EcoRV	GATATC	1 cut(s)	2095
EcoT14I	CCWWGG	4 cut(s)	331, 1068, 1374, 1829
EcoT38I	GRGCYC	3 cut(s)	61, 1577, 1603
ErhI	CCWWGG	4 cut(s)	331, 1068, 1374, 1829
FaeI	CATG	6 cut(s)	132, 394, 565, 1072, 1398, 1889
FalI	AAGNNNNNCTT	4 cut(s)	1562, 1594, 2246, 2278
FaqI	GGGAC	2 cut(s)	1885, 2047
FatI	CATG	6 cut(s)	128, 390, 561, 1068, 1394, 1885
FauI	CCCGC	1 cut(s)	1025
FblI	GTMKAC	1 cut(s)	2296
Fnu4HI	GCNGC	5 cut(s)	263, 287, 290, 1026, 1167
FokI	GGATG	6 cut(s)	444, 458, 1370, 1809, 1847, 1958
FriOI	GRGCYC	3 cut(s)	61, 1577, 1603
Fsp4HI	GCNGC	5 cut(s)	263, 287, 290, 1026, 1167
FspBI	CTAG	3 cut(s)	746, 1145, 1640
GlaI	GCGC	1 cut(s)	1404
GluI	GCNGC	5 cut(s)	263, 287, 290, 1026, 1167
GsaI	CCCAGC	4 cut(s)	126, 501, 596, 1733
GsuI	CTGGAG	1 cut(s)	499
HaeIII	GGCC	4 cut(s)	133, 147, 900, 930
HapII	CCGG	3 cut(s)	494, 1016, 2000
HgaI	GACGC	2 cut(s)	664, 2306
HhaI	GCGC	1 cut(s)	1405
Hin1I	GRCGYC	1 cut(s)	2151
Hin1II	CATG	6 cut(s)	132, 394, 565, 1072, 1398, 1889
Hin6I	GCGC	1 cut(s)	1403
HinP1I	GCGC	1 cut(s)	1403
HindIII	AAGCTT	2 cut(s)	311, 2225
HinfI	GANTC	5 cut(s)	74, 398, 487, 1477, 1748
HpaII	CCGG	3 cut(s)	494, 1016, 2000
HphI	GGTGA	5 cut(s)	110, 261, 1057, 1273, 1673
Hpy166II	GTNNAC	2 cut(s)	1591, 2297
Hpy188III	TCNNGA	7 cut(s)	110, 402, 1097, 1145, 1416, 2120, 2266
Hpy8I	GTNNAC	2 cut(s)	1591, 2297
Hpy99I	CGWCG	1 cut(s)	425
HpyAV	CCTTC	8 cut(s)	35, 47, 144, 959, 1564, 1588, 1652, 2026
HpyCH4III	ACNGT	9 cut(s)	229, 245, 283, 371, 734, 775, 941, 1327, 2102
HpyCH4IV	ACGT	1 cut(s)	2151
HpyF10VI	GCNNNNNNNGC	5 cut(s)	629, 906, 1025, 1287, 2224
HpyF3I	CTNAG	5 cut(s)	60, 1211, 1445, 1717, 1743
HpySE526I	ACGT	1 cut(s)	2151
Hsp92I	GRCGYC	1 cut(s)	2151
Hsp92II	CATG	6 cut(s)	132, 394, 565, 1072, 1398, 1889
HspAI	GCGC	1 cut(s)	1403
KroI	GCCGGC	1 cut(s)	493
KroNI	GCCGGC	1 cut(s)	495
Kzo9I	GATC	9 cut(s)	95, 250, 438, 817, 871, 956, 1228, 1798, 2002
LguI	GCTCTTC	1 cut(s)	2252
LmnI	GCTCC	6 cut(s)	56, 1163, 1580, 1583, 1764, 1793
Lsp1109I	GCAGC	5 cut(s)	249, 276, 298, 1037, 1178
LweI	GCATC	4 cut(s)	517, 610, 1674, 1831
MaeI	CTAG	3 cut(s)	746, 1145, 1640
MaeII	ACGT	1 cut(s)	2151
MaeIII	GTNAC	6 cut(s)	326, 728, 1063, 1661, 1733, 2346
MalI	GATC	9 cut(s)	97, 252, 440, 819, 873, 958, 1230, 1800, 2004
MbiI	CCGCTC	1 cut(s)	1679
MboI	GATC	9 cut(s)	95, 250, 438, 817, 871, 956, 1228, 1798, 2002
MfeI	CAATTG	2 cut(s)	1156, 1692
MflI	RGATCY	4 cut(s)	95, 817, 1228, 1798
MhlI	GDGCHC	3 cut(s)	61, 1577, 1603
MlsI	TGGCCA	1 cut(s)	930
MluNI	TGGCCA	1 cut(s)	930
MlyI	GAGTC	2 cut(s)	481, 1742
MmeI	TCCRAC	2 cut(s)	172, 1266
Mox20I	TGGCCA	1 cut(s)	930
MroNI	GCCGGC	1 cut(s)	493
MroXI	GAANNNNTTC	2 cut(s)	1006, 2261
MscI	TGGCCA	1 cut(s)	930
MseI	TTAA	9 cut(s)	660, 672, 794, 885, 903, 1271, 1370, 1470, 2277
MslI	CAYNNNNRTG	3 cut(s)	1628, 1940, 2056
Msp20I	TGGCCA	1 cut(s)	930
MspA1I	CMGCKG	2 cut(s)	289, 1028
MspI	CCGG	3 cut(s)	494, 1016, 2000
MspR9I	CCNGG	4 cut(s)	92, 476, 954, 1763
MunI	CAATTG	2 cut(s)	1156, 1692
Mva1269I	GAATGC	2 cut(s)	1133, 1963
MvaI	CCWGG	4 cut(s)	92, 476, 954, 1763
MwoI	GCNNNNNNNGC	5 cut(s)	629, 906, 1025, 1287, 2224
NaeI	GCCGGC	1 cut(s)	495
NcoI	CCATGG	1 cut(s)	1068
NdeII	GATC	9 cut(s)	95, 250, 438, 817, 871, 956, 1228, 1798, 2002
NgoMIV	GCCGGC	1 cut(s)	493
NlaIII	CATG	6 cut(s)	132, 394, 565, 1072, 1398, 1889
NlaIV	GGNNCC	5 cut(s)	819, 1576, 1760, 1789, 2052
NmuCI	GTSAC	4 cut(s)	326, 728, 1063, 1661
NspI	RCATGY	1 cut(s)	565
PciSI	GCTCTTC	1 cut(s)	2252
PcsI	WCGNNNNNNNCGW	1 cut(s)	417
PctI	GAATGC	2 cut(s)	1133, 1963
PdiI	GCCGGC	1 cut(s)	495
PdmI	GAANNNNTTC	2 cut(s)	1006, 2261
PfeI	GAWTC	3 cut(s)	74, 398, 1477
PflFI	GACNNNGTC	1 cut(s)	1061
PflMI	CCANNNNNTGG	1 cut(s)	129
PfoI	TCCNGGA	1 cut(s)	952
PkrI	GCNGC	5 cut(s)	264, 288, 291, 1027, 1168
PleI	GAGTC	2 cut(s)	481, 1742
PpsI	GAGTC	2 cut(s)	481, 1742
PpuMI	RGGWCCY	1 cut(s)	2013
PshAI	GACNNNNGTC	1 cut(s)	333
PsiI	TTATAA	1 cut(s)	2196
Psp124BI	GAGCTC	1 cut(s)	61
Psp5II	RGGWCCY	1 cut(s)	2013
Psp6I	CCWGG	4 cut(s)	90, 474, 952, 1761
PspFI	CCCAGC	4 cut(s)	122, 497, 592, 1729
PspGI	CCWGG	4 cut(s)	90, 474, 952, 1761
PspN4I	GGNNCC	5 cut(s)	819, 1576, 1760, 1789, 2052
PspPI	GGNCC	2 cut(s)	858, 2013
PspPPI	RGGWCCY	1 cut(s)	2013
PstNI	CAGNNNCTG	1 cut(s)	490
PsuI	RGATCY	4 cut(s)	95, 817, 1228, 1798
PsyI	GACNNNGTC	1 cut(s)	1061
PvuII	CAGCTG	2 cut(s)	289, 1028
RsaI	GTAC	2 cut(s)	679, 1451
RsaNI	GTAC	2 cut(s)	678, 1450
RseI	CAYNNNNRTG	3 cut(s)	1628, 1940, 2056
SacI	GAGCTC	1 cut(s)	61
SapI	GCTCTTC	1 cut(s)	2252
SaqAI	TTAA	9 cut(s)	660, 672, 794, 885, 903, 1271, 1370, 1470, 2277
SatI	GCNGC	5 cut(s)	263, 287, 290, 1026, 1167
Sau3AI	GATC	9 cut(s)	95, 250, 438, 817, 871, 956, 1228, 1798, 2002
Sau96I	GGNCC	2 cut(s)	858, 2013
SchI	GAGTC	2 cut(s)	481, 1742
ScrFI	CCNGG	4 cut(s)	92, 476, 954, 1763
SduI	GDGCHC	3 cut(s)	61, 1577, 1603
SfaNI	GCATC	4 cut(s)	517, 610, 1674, 1831
SfcI	CTRYAG	2 cut(s)	2098, 2334
SinI	GGWCC	2 cut(s)	858, 2013
SmiMI	CAYNNNNRTG	3 cut(s)	1628, 1940, 2056
SmlI	CTYRAG	1 cut(s)	997
SmoI	CTYRAG	1 cut(s)	997
SsiI	CCGC	3 cut(s)	687, 1032, 1679
SspMI	CTAG	3 cut(s)	746, 1145, 1640
SstI	GAGCTC	1 cut(s)	61
StyD4I	CCNGG	4 cut(s)	90, 474, 952, 1761
StyI	CCWWGG	4 cut(s)	331, 1068, 1374, 1829
TaaI	ACNGT	9 cut(s)	229, 245, 283, 371, 734, 775, 941, 1327, 2102
TaiI	ACGT	1 cut(s)	2154
TaqI	TCGA	5 cut(s)	1176, 1438, 1675, 1751, 2265
TatI	WGTACW	1 cut(s)	677
TfiI	GAWTC	3 cut(s)	74, 398, 1477
Tru1I	TTAA	9 cut(s)	660, 672, 794, 885, 903, 1271, 1370, 1470, 2277
Tru9I	TTAA	9 cut(s)	660, 672, 794, 885, 903, 1271, 1370, 1470, 2277
TscAI	CASTG	6 cut(s)	264, 288, 307, 733, 1635, 2161
TseFI	GTSAC	4 cut(s)	326, 728, 1063, 1661
TseI	GCWGC	5 cut(s)	262, 286, 289, 1025, 1166
Tsp45I	GTSAC	4 cut(s)	326, 728, 1063, 1661
TspGWI	ACGGA	2 cut(s)	588, 801
TspRI	CASTG	6 cut(s)	264, 288, 307, 733, 1635, 2161
Tth111I	GACNNNGTC	1 cut(s)	1061
Van91I	CCANNNNNTGG	1 cut(s)	129
VpaK11BI	GGWCC	2 cut(s)	858, 2013
XapI	RAATTY	5 cut(s)	155, 195, 1359, 1434, 1949
XbaI	TCTAGA	1 cut(s)	1144
XceI	RCATGY	1 cut(s)	565
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1075
XmiI	GTMKAC	1 cut(s)	2296
XmnI	GAANNNNTTC	2 cut(s)	1006, 2261
XspI	CTAG	3 cut(s)	746, 1145, 1640
ZraI	GACGTC	1 cut(s)	2152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.