Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004345.1

Orthogroup ID

OG0004215

Physical Location & Seq

Genomic Coordinates Reverse (-)

30889 .. 33312

Gene Structure 2424 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004345.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

atggcttccattagtgttattagtgtctgtctcctctgtctatgttgtttgagtgaagcagctcaacagcagcatagttctggccaaatagcccggggctcttcactttctcccatcactcacccaagctcatggccttctccttctagcaaatttgcattcggcttttatcggcaaggaactggctttgcagtcggaatttggttggtggatatggatcagaaaacaattgtttggacagcaaatcgggatgaccccccagtcgcctcaacttcagtgctgcagcttagtcatggtgagcttgtcctgataaatgaactaggacagaagaaactcatcatctccaatagtaacaatgaacttgtttcctttgcctccatgcttgattctggcaactttgttttatataatgaaagattcgaagaaatttgggagagttttgatcatcctactgatactatcctgaatggtcaaactctgtctgttggaggtcagctatactctagcttatcagaagctgatcactctactggacggtttctcctcaagatgcagcatgatggaaacctagtcctatacccggcaaatactgaagactggaatactgattcttattggagctctgaaacgtccaacctcggcatcaattttcacctctatcttgatgatacaggtattctagttctcaccaatacgactacttcgaaatatttggagagttaccatgttatatatggtggatatgaaaatggctatggttacaaaaatggcaccacctaccgtgcaactgttggcgtggatggaattttccggttgtattctcatggttctgatgatcacaatggaaagctccaaccatctgttcttatgtggtccgctatagatgatccttgccaagttaaaggattatgtggccttaacagctattgcacactctatgatgaccaaccaaactgcctttgtcttcctggattaaattacgttaatatggatcagaaaatgctgggttgcttgagaaacttttctgaagtagagtgtcaaggtgggaaagaaaacacatccaattatcaaatgagcaccatgaccaatatgatgtggggaggcacttcttacgcagaagaggagatgttgatggaagaatgcaggaggtcttgtttggaagactgcaactgtggtgcagctctgttcctggaaggatactgtacaaagcaaaagctaccactcagatatgtccgaagggatctgcaacagactagcatagcctttttcaaggttggaatcatcacaagcaccgaaagcaacaaccaaactgatcaacttcccatcggggtgaatccattcacggaggttgacggcacaagcaagaaactacttgtgcaagttcttgctataactttaggtttcatcatattcatatgtgttgctcttgcaatttctggatactacattttcaaaattcgagttctacattacaaaaggctcacagaggttaatggtaatctgggcctggccgatgaggagctcacgttgagagttttttcatacaacgagctgaaaagagctacaaatggtttcaagcaagaattgggaaagggctcctttggagcagtgtataaaggggctctaaaaaaaggcaaaaaactcattgcagttaaaagactggaaaagttagtggaagaaggtgagagggagtttcgagcggagatgcaagcaattggaagaactcatcacaagaacttagttcgattgctgggttactctgctgaggactcgaaaaggctcctggtctatgaatatatgagcaatggctcccttgcagatcttcttttcaaggcagaattgcatccagcttgggatgaaagagtgagaattgcagttgatgtcgcaagtggtctcctctatctacatgaagagtgcaagtcccctatcattcattgcgacataaagcctcaaaacattctgatggacgaattttggaatgcaaaaatcgctgattttggacttgcaaaactgctaatgccggatcaaacaaggaccttcacaggaataagagggacaagagggtatttggccccagaatggcaaaagaacactccaatctcagtgaaggcagatatctatagttttggtatagtgcttcttgaacttgtgtgttgcaggaggaacttggacgtcagtgtgagagcagaggagatagttctttctacttgggtttataagtgctttgtcagcagagagctgcataagcttattgtgggtggcgaagaagtgaacaagaagagcttggagaatatggttaaggtgggattatggtgtatacaagatgaaccagccctgcgtccatcaatgaagtctgtagtattgatgttgcaaggcattactgatatatctatccctccatgtccaaccactgcttctatgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

807

Amino Acids

90.27

Weight (kDa)

5.74

Isoelectric Point (pI)

33.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004215)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23400
prunus_persica	Prupe.6G165300_v2.0.a1 Prupe.6G165500_v2.0.a1 Prupe.6G165500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118691 RchiOBHm_Chr2g0118751 RchiOBHm_Chr2g0118771
rosa_laevigata	RLG00000018420
rosa_multiflora	Rmu_co8322425.1_g000001 Rmu_sc0001814.1_g000023 Rmu_sc0001814.1_g000024 Rmu_sc0001814.1_g000031 Rmu_sc0002831.1_g000032 Rmu_sc0003564.1_g000001 Rmu_sc0004345.1_g000011
rosa_roxburghii	Rroxscaffold_2G00124740 Rroxscaffold_2G00124750 Rroxscaffold_2G00124840 Rroxscaffold_2G00124870 Rroxscaffold_2G00124880 Rroxscaffold_2G00125530
rosa_rugosa	Rorug02G0218500
rosa_samantha	Rh2AG274800 Rh2AG275100 Rh2AG275400 Rh2BG286900 Rh2BG287300 Rh2DG282600 Rh2DG301600 Rh2DG301800
rosa_wichuraiana	Rw2G021860 Rw2G021880 Rw2G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2217
AasI	GACNNNNNNGTC	1 cut(s)	260
AatII	GACGTC	1 cut(s)	2175
AccB1I	GGYRCC	1 cut(s)	770
AccBSI	CCGCTC	1 cut(s)	1700
AccI	GTMKAC	1 cut(s)	2317
AciI	CCGC	2 cut(s)	876, 1700
AclWI	GGATC	5 cut(s)	225, 881, 999, 1248, 2031
AcoI	YGGCCR	2 cut(s)	82, 1509
AcsI	RAATTY	6 cut(s)	152, 198, 426, 804, 1455, 1970
AcuI	CTGAAG	3 cut(s)	258, 612, 1047
AcyI	GRCGYC	1 cut(s)	2172
AfaI	GTAC	1 cut(s)	1204
AfiI	CCNNNNNNNGG	2 cut(s)	580, 2079
AgsI	TTSAA	5 cut(s)	1270, 1453, 1576, 1831, 2144
AjnI	CCWGG	4 cut(s)	967, 1188, 1506, 1782
AjuI	GAANNNNNNNTTGG	3 cut(s)	846, 878, 2398
Alw21I	GWGCWC	3 cut(s)	623, 1079, 1524
Alw26I	GTCTC	2 cut(s)	35, 1898
AlwI	GGATC	5 cut(s)	225, 881, 999, 1248, 2031
AlwNI	CAGNNNCTG	1 cut(s)	518
Ama87I	CYCGRG	1 cut(s)	93
AoxI	GGCC	6 cut(s)	82, 134, 913, 1504, 1509, 2070
ApeKI	GCWGC	7 cut(s)	59, 70, 280, 283, 553, 1178, 2239
ApoI	RAATTY	6 cut(s)	152, 198, 426, 804, 1455, 1970
Asp700I	GAANNNNTTC	2 cut(s)	1021, 1337
AspS9I	GGNCC	4 cut(s)	873, 1504, 2034, 2071
AsuC2I	CCSGG	3 cut(s)	94, 95, 581
AsuHPI	GGTGA	6 cut(s)	113, 308, 644, 679, 1342, 1694
AsuII	TTCGAA	2 cut(s)	420, 704
AvaI	CYCGRG	1 cut(s)	93
AvaII	GGWCC	2 cut(s)	873, 2034
BalI	TGGCCA	1 cut(s)	84
BanI	GGYRCC	1 cut(s)	770
BanII	GRGCYC	5 cut(s)	101, 623, 1524, 1598, 1624
BbsI	GAAGAC	3 cut(s)	600, 956, 1167
Bbv12I	GWGCWC	3 cut(s)	623, 1079, 1524
BbvCI	CCTCAGC	1 cut(s)	1764
BbvI	GCAGC	7 cut(s)	71, 82, 267, 295, 565, 1190, 2226
BccI	CCATC	8 cut(s)	122, 554, 794, 865, 1126, 1331, 1957, 2350
BceAI	ACGGC	1 cut(s)	1369
BciT130I	CCWGG	4 cut(s)	969, 1190, 1508, 1784
BciVI	GTATCC	2 cut(s)	1190, 1433
BclI	TGATCA	4 cut(s)	442, 520, 835, 1312
BcnI	CCSGG	3 cut(s)	94, 95, 581
BcoDI	GTCTC	2 cut(s)	35, 1898
BfaI	CTAG	6 cut(s)	147, 320, 504, 569, 680, 1254
BfmI	CTRYAG	4 cut(s)	281, 879, 2119, 2355
BfuI	GTATCC	2 cut(s)	1190, 1433
BglII	AGATCT	1 cut(s)	1819
BisI	GCNGC	7 cut(s)	60, 71, 281, 284, 554, 1179, 2240
BlsI	GCNGC	7 cut(s)	61, 72, 282, 285, 555, 1180, 2241
Bme1390I	CCNGG	7 cut(s)	94, 95, 581, 969, 1190, 1508, 1784
Bme18I	GGWCC	2 cut(s)	873, 2034
BmeT110I	CYCGRG	1 cut(s)	93
BmgT120I	GGNCC	4 cut(s)	873, 1504, 2034, 2071
BmiI	GGNNCC	5 cut(s)	772, 1597, 1781, 1810, 2073
BmrFI	CCNGG	7 cut(s)	94, 95, 581, 969, 1190, 1508, 1784
BmrI	ACTGGG	1 cut(s)	254
BmsI	GCATC	4 cut(s)	540, 651, 1695, 1852
BmuI	ACTGGG	1 cut(s)	254
BpiI	GAAGAC	3 cut(s)	600, 956, 1167
Bpu10I	CCTNAGC	1 cut(s)	1764
Bpu14I	TTCGAA	2 cut(s)	420, 704
BpuEI	CTTGAG	2 cut(s)	530, 1033
BpuMI	CCSGG	3 cut(s)	94, 95, 581
BsaBI	GATNNNNATC	1 cut(s)	216
BsaHI	GRCGYC	1 cut(s)	2172
BsaI	GGTCTC	1 cut(s)	1898
BsaJI	CCNNGG	3 cut(s)	93, 94, 637
BsaWI	WCCGGW	1 cut(s)	810
BsaXI	ACNNNNNCTCC	6 cut(s)	525, 555, 1138, 1168, 1511, 1541
Bsc4I	CCNNNNNNNGG	2 cut(s)	580, 2079
Bse1I	ACTGG	5 cut(s)	187, 260, 535, 602, 1665
Bse3DI	GCAATG	3 cut(s)	1644, 1810, 1933
Bse8I	GATNNNNATC	1 cut(s)	216
BseBI	CCWGG	4 cut(s)	969, 1190, 1508, 1784
BseDI	CCNNGG	3 cut(s)	93, 94, 637
BseGI	GGATG	6 cut(s)	256, 445, 805, 1058, 1843, 1861
BseJI	GATNNNNATC	1 cut(s)	216
BseLI	CCNNNNNNNGG	2 cut(s)	580, 2079
BseMI	GCAATG	3 cut(s)	1644, 1810, 1933
BseMII	CTCAG	3 cut(s)	1237, 1755, 2115
BseNI	ACTGG	5 cut(s)	187, 260, 535, 602, 1665
BseRI	GAGGAG	6 cut(s)	23, 533, 1136, 1532, 1886, 2204
BseXI	GCAGC	7 cut(s)	71, 82, 267, 295, 565, 1190, 2226
BseYI	CCCAGC	2 cut(s)	1003, 1750
BsgI	GTGCAG	1 cut(s)	1197
BshFI	GGCC	6 cut(s)	84, 136, 915, 1506, 1511, 2072
BshNI	GGYRCC	1 cut(s)	770
BsiHKAI	GWGCWC	3 cut(s)	623, 1079, 1524
BsiHKCI	CYCGRG	1 cut(s)	93
BsiSI	CCGG	4 cut(s)	94, 581, 811, 2021
BslFI	GGGAC	2 cut(s)	1906, 2068
BslI	CCNNNNNNNGG	2 cut(s)	580, 2079
BsmAI	GTCTC	2 cut(s)	35, 1898
BsmFI	GGGAC	2 cut(s)	1906, 2068
BsmI	GAATGC	3 cut(s)	158, 1145, 1984
BsnI	GGCC	6 cut(s)	84, 136, 915, 1506, 1511, 2072
Bso31I	GGTCTC	1 cut(s)	1898
BsoBI	CYCGRG	1 cut(s)	93
Bsp119I	TTCGAA	2 cut(s)	420, 704
Bsp1286I	GDGCHC	6 cut(s)	101, 623, 1079, 1524, 1598, 1624
Bsp1407I	TGTACA	1 cut(s)	1202
BspACI	CCGC	2 cut(s)	876, 1700
BspANI	GGCC	6 cut(s)	84, 136, 915, 1506, 1511, 2072
BspCNI	CTCAG	3 cut(s)	1236, 1756, 2114
BspLI	GGNNCC	5 cut(s)	772, 1597, 1781, 1810, 2073
BspMAI	CTGCAG	1 cut(s)	285
BspPI	GGATC	5 cut(s)	225, 881, 999, 1248, 2031
BspQI	GCTCTTC	2 cut(s)	106, 2273
BspT104I	TTCGAA	2 cut(s)	420, 704
BspT107I	GGYRCC	1 cut(s)	770
BspTNI	GGTCTC	1 cut(s)	1898
BsrBI	CCGCTC	1 cut(s)	1700
BsrDI	GCAATG	3 cut(s)	1644, 1810, 1933
BsrGI	TGTACA	1 cut(s)	1202
BsrI	ACTGG	5 cut(s)	187, 260, 535, 602, 1665
BssECI	CCNNGG	3 cut(s)	93, 94, 637
BssNAI	GTATAC	1 cut(s)	2318
BssNI	GRCGYC	1 cut(s)	2172
Bst1107I	GTATAC	1 cut(s)	2318
Bst2UI	CCWGG	4 cut(s)	969, 1190, 1508, 1784
Bst4CI	ACNGT	5 cut(s)	537, 782, 790, 1172, 1202
Bst6I	CTCTTC	4 cut(s)	106, 1113, 1905, 2273
BstACI	GRCGYC	1 cut(s)	2172
BstAUI	TGTACA	1 cut(s)	1202
BstBI	TTCGAA	2 cut(s)	420, 704
BstC8I	GCNNGC	1 cut(s)	1710
BstDEI	CTNAG	5 cut(s)	287, 1223, 1738, 1764, 2101
BstF5I	GGATG	6 cut(s)	256, 445, 805, 1058, 1843, 1861
BstMAI	GTCTC	2 cut(s)	35, 1898
BstMWI	GCNNNNNNNGC	5 cut(s)	921, 1296, 1988, 2229, 2245
BstNI	CCWGG	4 cut(s)	969, 1190, 1508, 1784
BstSCI	CCNGG	7 cut(s)	92, 93, 579, 967, 1188, 1506, 1782
BstSFI	CTRYAG	4 cut(s)	281, 879, 2119, 2355
BstV1I	GCAGC	7 cut(s)	71, 82, 267, 295, 565, 1190, 2226
BstV2I	GAAGAC	3 cut(s)	600, 956, 1167
BstX2I	RGATCY	2 cut(s)	1240, 1819
BstXI	CCANNNNNNTGG	1 cut(s)	132
BstYI	RGATCY	2 cut(s)	1240, 1819
BstZ17I	GTATAC	1 cut(s)	2318
BsuI	GTATCC	2 cut(s)	1190, 1433
BsuRI	GGCC	6 cut(s)	84, 136, 915, 1506, 1511, 2072
BtsCI	GGATG	6 cut(s)	256, 445, 805, 1058, 1843, 1861
BtsI	GCAGTG	2 cut(s)	1614, 2409
BtsIMutI	CAGTG	5 cut(s)	282, 1614, 2109, 2182, 2409
Cac8I	GCNNGC	1 cut(s)	1710
CaiI	CAGNNNCTG	1 cut(s)	518
Cfr13I	GGNCC	4 cut(s)	873, 1504, 2034, 2071
Cfr9I	CCCGGG	1 cut(s)	93
CseI	GACGC	1 cut(s)	2327
Csp6I	GTAC	1 cut(s)	1203
CviAII	CATG	9 cut(s)	132, 293, 379, 557, 725, 824, 1081, 1907, 2400
CviQI	GTAC	1 cut(s)	1203
DdeI	CTNAG	5 cut(s)	287, 1223, 1738, 1764, 2101
DrdI	GACNNNNNNGTC	1 cut(s)	260
DseDI	GACNNNNNNGTC	1 cut(s)	260
EaeI	YGGCCR	2 cut(s)	82, 1509
Eam1104I	CTCTTC	4 cut(s)	106, 1113, 1905, 2273
EarI	CTCTTC	4 cut(s)	106, 1113, 1905, 2273
Ecl136II	GAGCTC	2 cut(s)	621, 1522
Eco24I	GRGCYC	5 cut(s)	101, 623, 1524, 1598, 1624
Eco31I	GGTCTC	1 cut(s)	1898
Eco32I	GATATC	1 cut(s)	2116
Eco47I	GGWCC	2 cut(s)	873, 2034
Eco53kI	GAGCTC	2 cut(s)	621, 1522
Eco57I	CTGAAG	3 cut(s)	258, 612, 1047
Eco88I	CYCGRG	1 cut(s)	93
EcoICRI	GAGCTC	2 cut(s)	621, 1522
EcoO109I	RGGNCCY	1 cut(s)	2034
EcoRII	CCWGG	4 cut(s)	967, 1188, 1506, 1782
EcoRV	GATATC	1 cut(s)	2116
EcoT38I	GRGCYC	5 cut(s)	101, 623, 1524, 1598, 1624
FaeI	CATG	9 cut(s)	135, 296, 382, 560, 728, 827, 1084, 1910, 2403
FalI	AAGNNNNNCTT	4 cut(s)	1583, 1615, 2267, 2299
FaqI	GGGAC	2 cut(s)	1906, 2068
FatI	CATG	9 cut(s)	131, 292, 378, 556, 724, 823, 1080, 1906, 2399
FauNDI	CATATG	1 cut(s)	1415
FbaI	TGATCA	4 cut(s)	442, 520, 835, 1312
FblI	GTMKAC	1 cut(s)	2317
Fnu4HI	GCNGC	7 cut(s)	60, 71, 281, 284, 554, 1179, 2240
FokI	GGATG	6 cut(s)	263, 432, 812, 1045, 1830, 1868
FriOI	GRGCYC	5 cut(s)	101, 623, 1524, 1598, 1624
Fsp4HI	GCNGC	7 cut(s)	60, 71, 281, 284, 554, 1179, 2240
FspBI	CTAG	6 cut(s)	147, 320, 504, 569, 680, 1254
GluI	GCNGC	7 cut(s)	60, 71, 281, 284, 554, 1179, 2240
GsaI	CCCAGC	2 cut(s)	1007, 1754
HaeIII	GGCC	6 cut(s)	84, 136, 915, 1506, 1511, 2072
HapII	CCGG	4 cut(s)	94, 581, 811, 2021
HgaI	GACGC	1 cut(s)	2327
Hin1I	GRCGYC	1 cut(s)	2172
Hin1II	CATG	9 cut(s)	135, 296, 382, 560, 728, 827, 1084, 1910, 2403
HincII	GTYRAC	1 cut(s)	1351
HindII	GTYRAC	1 cut(s)	1351
HindIII	AAGCTT	1 cut(s)	2246
HinfI	GANTC	6 cut(s)	386, 417, 608, 1278, 1333, 1769
HpaII	CCGG	4 cut(s)	94, 581, 811, 2021
HphI	GGTGA	6 cut(s)	113, 308, 644, 679, 1342, 1694
Hpy166II	GTNNAC	3 cut(s)	1351, 2272, 2318
Hpy188III	TCNNGA	7 cut(s)	248, 307, 463, 547, 662, 1437, 2141
Hpy8I	GTNNAC	3 cut(s)	1351, 2272, 2318
HpyAV	CCTTC	7 cut(s)	147, 153, 1187, 1230, 1673, 2047, 2101
HpyCH4III	ACNGT	5 cut(s)	537, 782, 790, 1172, 1202
HpyCH4IV	ACGT	4 cut(s)	629, 981, 1526, 2172
HpyF10VI	GCNNNNNNNGC	5 cut(s)	921, 1296, 1988, 2229, 2245
HpyF3I	CTNAG	5 cut(s)	287, 1223, 1738, 1764, 2101
HpySE526I	ACGT	4 cut(s)	629, 981, 1526, 2172
Hsp92I	GRCGYC	1 cut(s)	2172
Hsp92II	CATG	9 cut(s)	135, 296, 382, 560, 728, 827, 1084, 1910, 2403
Ksp22I	TGATCA	4 cut(s)	442, 520, 835, 1312
LguI	GCTCTTC	2 cut(s)	106, 2273
LmnI	GCTCC	7 cut(s)	618, 855, 1519, 1601, 1604, 1785, 1814
Lsp1109I	GCAGC	7 cut(s)	71, 82, 267, 295, 565, 1190, 2226
LweI	GCATC	4 cut(s)	540, 651, 1695, 1852
MaeI	CTAG	6 cut(s)	147, 320, 504, 569, 680, 1254
MaeII	ACGT	4 cut(s)	629, 981, 1526, 2172
MaeIII	GTNAC	4 cut(s)	350, 719, 758, 1754
MbiI	CCGCTC	1 cut(s)	1700
MfeI	CAATTG	2 cut(s)	228, 1713
MflI	RGATCY	2 cut(s)	1240, 1819
MhlI	GDGCHC	6 cut(s)	101, 623, 1079, 1524, 1598, 1624
MlsI	TGGCCA	1 cut(s)	84
MluNI	TGGCCA	1 cut(s)	84
MlyI	GAGTC	1 cut(s)	1763
MmeI	TCCRAC	5 cut(s)	175, 466, 657, 877, 1255
Mox20I	TGGCCA	1 cut(s)	84
MroXI	GAANNNNTTC	2 cut(s)	1021, 1337
MscI	TGGCCA	1 cut(s)	84
MseI	TTAA	7 cut(s)	900, 918, 974, 984, 1491, 1653, 2298
MslI	CAYNNNNRTG	2 cut(s)	1328, 1961
Msp20I	TGGCCA	1 cut(s)	84
MspI	CCGG	4 cut(s)	94, 581, 811, 2021
MspR9I	CCNGG	7 cut(s)	94, 95, 581, 969, 1190, 1508, 1784
MunI	CAATTG	2 cut(s)	228, 1713
Mva1269I	GAATGC	3 cut(s)	158, 1145, 1984
MvaI	CCWGG	4 cut(s)	969, 1190, 1508, 1784
MwoI	GCNNNNNNNGC	5 cut(s)	921, 1296, 1988, 2229, 2245
NciI	CCSGG	3 cut(s)	94, 95, 581
NdeI	CATATG	1 cut(s)	1415
NlaIII	CATG	9 cut(s)	135, 296, 382, 560, 728, 827, 1084, 1910, 2403
NlaIV	GGNNCC	5 cut(s)	772, 1597, 1781, 1810, 2073
NmeAIII	GCCGAG	1 cut(s)	618
NspV	TTCGAA	2 cut(s)	420, 704
PciSI	GCTCTTC	2 cut(s)	106, 2273
PcsI	WCGNNNNNNNCGW	1 cut(s)	701
PctI	GAATGC	3 cut(s)	158, 1145, 1984
PdmI	GAANNNNTTC	2 cut(s)	1021, 1337
PfeI	GAWTC	5 cut(s)	386, 417, 608, 1278, 1333
PfoI	TCCNGGA	2 cut(s)	967, 1188
PkrI	GCNGC	7 cut(s)	61, 72, 282, 285, 555, 1180, 2241
PleI	GAGTC	1 cut(s)	1763
PpsI	GAGTC	1 cut(s)	1763
PpuMI	RGGWCCY	1 cut(s)	2034
PsiI	TTATAA	1 cut(s)	2217
Psp124BI	GAGCTC	2 cut(s)	623, 1524
Psp5II	RGGWCCY	1 cut(s)	2034
Psp6I	CCWGG	4 cut(s)	967, 1188, 1506, 1782
PspFI	CCCAGC	2 cut(s)	1003, 1750
PspGI	CCWGG	4 cut(s)	967, 1188, 1506, 1782
PspN4I	GGNNCC	5 cut(s)	772, 1597, 1781, 1810, 2073
PspPI	GGNCC	4 cut(s)	873, 1504, 2034, 2071
PspPPI	RGGWCCY	1 cut(s)	2034
PstI	CTGCAG	1 cut(s)	285
PstNI	CAGNNNCTG	1 cut(s)	518
PsuI	RGATCY	2 cut(s)	1240, 1819
RsaI	GTAC	1 cut(s)	1204
RsaNI	GTAC	1 cut(s)	1203
RseI	CAYNNNNRTG	2 cut(s)	1328, 1961
SacI	GAGCTC	2 cut(s)	623, 1524
SapI	GCTCTTC	2 cut(s)	106, 2273
SaqAI	TTAA	7 cut(s)	900, 918, 974, 984, 1491, 1653, 2298
SatI	GCNGC	7 cut(s)	60, 71, 281, 284, 554, 1179, 2240
Sau96I	GGNCC	4 cut(s)	873, 1504, 2034, 2071
SchI	GAGTC	1 cut(s)	1763
ScrFI	CCNGG	7 cut(s)	94, 95, 581, 969, 1190, 1508, 1784
SduI	GDGCHC	6 cut(s)	101, 623, 1079, 1524, 1598, 1624
SfaNI	GCATC	4 cut(s)	540, 651, 1695, 1852
SfcI	CTRYAG	4 cut(s)	281, 879, 2119, 2355
SfuI	TTCGAA	2 cut(s)	420, 704
SinI	GGWCC	2 cut(s)	873, 2034
SmaI	CCCGGG	1 cut(s)	95
SmiMI	CAYNNNNRTG	2 cut(s)	1328, 1961
SmlI	CTYRAG	2 cut(s)	545, 1012
SmoI	CTYRAG	2 cut(s)	545, 1012
SsiI	CCGC	2 cut(s)	876, 1700
SspI	AATATT	1 cut(s)	710
SspMI	CTAG	6 cut(s)	147, 320, 504, 569, 680, 1254
SstI	GAGCTC	2 cut(s)	623, 1524
StyD4I	CCNGG	7 cut(s)	92, 93, 579, 967, 1188, 1506, 1782
TaaI	ACNGT	5 cut(s)	537, 782, 790, 1172, 1202
TaiI	ACGT	4 cut(s)	632, 984, 1529, 2175
TaqI	TCGA	6 cut(s)	420, 704, 1459, 1696, 1744, 1772
TatI	WGTACW	1 cut(s)	1202
TfiI	GAWTC	5 cut(s)	386, 417, 608, 1278, 1333
Tru1I	TTAA	7 cut(s)	900, 918, 974, 984, 1491, 1653, 2298
Tru9I	TTAA	7 cut(s)	900, 918, 974, 984, 1491, 1653, 2298
TscAI	CASTG	5 cut(s)	282, 1614, 2109, 2182, 2416
TseI	GCWGC	7 cut(s)	59, 70, 280, 283, 553, 1178, 2239
TspGWI	ACGGA	1 cut(s)	1358
TspMI	CCCGGG	1 cut(s)	93
TspRI	CASTG	5 cut(s)	282, 1614, 2109, 2182, 2416
VpaK11BI	GGWCC	2 cut(s)	873, 2034
XapI	RAATTY	6 cut(s)	152, 198, 426, 804, 1455, 1970
XcmI	CCANNNNNNNNNTGG	1 cut(s)	731
XmaI	CCCGGG	1 cut(s)	93
XmiI	GTMKAC	1 cut(s)	2317
XmnI	GAANNNNTTC	2 cut(s)	1021, 1337
XspI	CTAG	6 cut(s)	147, 320, 504, 569, 680, 1254
ZraI	GACGTC	1 cut(s)	2173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.