Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004215

Physical Location & Seq

Genomic Coordinates Reverse (-)

60393849 .. 60396308

Gene Structure 2460 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00125530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGCATGGGATTATGGCTTCCATTGGCATAGCTATCCTTCTCTTCTCACTATATTCTCTATGTGAAGGAGCTCAACAAAACAACAATTATAGCCACATACCCCTGGGATCTCCACTCTTTCCAGAAACTCACCCCAGCTCATGGCCTTCTGCCTCTGGCCTGTTTGAATTCGGCTTTTATAAGCAAGGAAATGGTTTTGCTGTTGGAATTTGGTTGGTGGGAGTAGACGGAAACACAACTGTAAACACAACTGTATGGACAGCAAACCGTGATGATCCCCCACTGCTGCCCTCACCAAATAATACAGTGCAGCTGCAGTTAGCCAAAGATGGCAAGCTTGTTCTAACCAGTGGCCAAGGTCATAAAAAATTAGTCATCGCAAGTGCAACAAACGGTTTTGTTTCCTCTGCCTCCATGCTTGATTCTGGAAACTTCGTTCTTTACGACGAAAACTATAAAGTGATCTGGGAGAGTTTCAGTCATCCTACTGATACTATCCTGGGTGGTCAGACCCTGCCGGCTGGGGGTCAATTAGTCTCCAGTTTGTCCGATGCTAACCACTCAACAGGACATTTTCATCTCAACATGCAGACTGACGGAAACCTTGTTGTCTACCCAGCAAACTCTGAAAACTCTGAGCTAGATGGCTACTATTTTCAGTATATTTCACGTACTTCGGAAAACTCGAAGCTTAACCTCTATCTTAACAGTACAGATGGCGGTCTTGCTCTAATCAACACCACCAGCCCGGTAATGATCCCTGCGGGTAGTGGTAATGATGATCTAGCCATTAACACTGTATATCGGGCAACTGTTAGCGTGAACGGAGTATTACGAGTTTATTCTCATCAGATGGATCCTAAGACACGCAAACTCCAAGCACCTGTTATTATGTGGTACGAACCAAGTGATCCTTGCAATGTTAAAGGCGTCTGTGGCCTTAACAGCTATTGCACACTCAATGATGACCAACCAGACTGTCTTTGCCTTCCTGGATCAGATTACGCTGACCCCAACCGCAGGACTATGGGTTGCTTGAGAAACTATTCAGAACCGGCGTGTGCAGCCGGCGGGAAAGACAATACAACCTTTTATGACATACTCACCATGGCAAATTTGGCCTGGCCAGATACTCCCGACTTTGAAGCCACAATGACCATGGAAGAATGCAAGAGCTCTTGTCTAGAGGACTGCAATTGTGGAGCAGCTCTGTTCGAGCAGACAAATTATTGTATGAAACAGAAGCCACCGCTCAGATATGTGAGAAGAGATCTGGAGACATCCAACACAGCTTTCTTCAAGGTAAGCAAGTTAACAAGAAGTCCTGAAAGCAATAATAATGGAACTGAAACTGAAGAACCATTTCCGAAGATTCCCACTACGGTTGTTATCAGAAGCAAGAAAGTCATTGTGCAAATTCTTGTTTTAACCTTAGGTCTCATCCTCTTCTCATGTGTTGCGCTTGCAATATCTGGATTTTACATTTTCAAAATTAGAGTTCTGAGGTACAAAAGGCTGACAGAGGTTAATGGGAATCTGGGGCTGGCTGATGAGGAACTCACTATGAGAGCAGATATCTACAGTTTTGGTATAGTGCTTCTTGAACTTGTGTGTTGCAGGAGGAATTTGGACGTCAGTGTTAGGGCAGAAGAGATGGTTCTTTCTACTTGGGTTTATAAGTGCTTTGTCAGTAGAGAGCTGCATAAGCTTATTGTGGGTGGCGAAGAAGTGAACAAGAAGAGCTTGGAGAATATGGTTAAGGTGGGATTATGGTGTATACAAGATGAACCAGCTCTGCGTCCATCAATGAAGTCTGTAGTATTGATGTTACAAGGCATTACTGATATATCTATCCCTCCATGTCCAAGCACTGCTTCTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

627

Amino Acids

68.88

Weight (kDa)

5.35

Isoelectric Point (pI)

40.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	83 - 172	1.9e-16	D-mannose binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004215)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23400
prunus_persica	Prupe.6G165300_v2.0.a1 Prupe.6G165500_v2.0.a1 Prupe.6G165500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118691 RchiOBHm_Chr2g0118751 RchiOBHm_Chr2g0118771
rosa_laevigata	RLG00000018420
rosa_multiflora	Rmu_co8322425.1_g000001 Rmu_sc0001814.1_g000023 Rmu_sc0001814.1_g000024 Rmu_sc0001814.1_g000031 Rmu_sc0002831.1_g000032 Rmu_sc0003564.1_g000001 Rmu_sc0004345.1_g000011
rosa_roxburghii	Rroxscaffold_2G00124740 Rroxscaffold_2G00124750 Rroxscaffold_2G00124840 Rroxscaffold_2G00124870 Rroxscaffold_2G00124880 Rroxscaffold_2G00125530
rosa_rugosa	Rorug02G0218500
rosa_samantha	Rh2AG274800 Rh2AG275100 Rh2AG275400 Rh2BG286900 Rh2BG287300 Rh2DG282600 Rh2DG301600 Rh2DG301800
rosa_wichuraiana	Rw2G021860 Rw2G021880 Rw2G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	180, 1677
AatII	GACGTC	1 cut(s)	1635
AccB7I	CCANNNNNTGG	1 cut(s)	141
AccBSI	CCGCTC	1 cut(s)	1252
AccI	GTMKAC	3 cut(s)	225, 612, 1777
AciI	CCGC	5 cut(s)	720, 764, 1018, 1071, 1250
AclWI	GGATC	7 cut(s)	115, 269, 751, 851, 864, 905, 1003
AcoI	YGGCCR	2 cut(s)	352, 1124
AcsI	RAATTY	5 cut(s)	167, 207, 1114, 1416, 1624
AcuI	CTGAAG	1 cut(s)	1374
AcyI	GRCGYC	2 cut(s)	930, 1632
AfaI	GTAC	4 cut(s)	673, 712, 899, 1508
AfiI	CCNNNNNNNGG	3 cut(s)	141, 524, 1020
AgsI	TTSAA	5 cut(s)	167, 1145, 1300, 1489, 1604
AjnI	CCWGG	4 cut(s)	102, 498, 991, 1121
AjuI	GAANNNNNNNTTGG	3 cut(s)	1277, 1309, 1858
AloI	GAACNNNNNNTCC	2 cut(s)	420, 452
Alw21I	GWGCWC	2 cut(s)	73, 1178
Alw26I	GTCTC	3 cut(s)	541, 1271, 1442
AlwI	GGATC	7 cut(s)	115, 269, 751, 851, 864, 905, 1003
AlwNI	CAGNNNCTG	1 cut(s)	514
AoxI	GGCC	6 cut(s)	143, 157, 352, 937, 1119, 1124
ApeKI	GCWGC	6 cut(s)	286, 310, 313, 1064, 1205, 1699
ApoI	RAATTY	5 cut(s)	167, 207, 1114, 1416, 1624
Asp700I	GAANNNNTTC	2 cut(s)	1045, 1362
AspLEI	GCGC	1 cut(s)	1462
AsuC2I	CCSGG	1 cut(s)	749
AsuHPI	GGTGA	3 cut(s)	122, 285, 1096
AxyI	CCTNAGG	1 cut(s)	1432
BalI	TGGCCA	2 cut(s)	354, 1126
BamHI	GGATCC	1 cut(s)	856
BanII	GRGCYC	2 cut(s)	73, 1178
Bbv12I	GWGCWC	2 cut(s)	73, 1178
BbvI	GCAGC	6 cut(s)	273, 300, 322, 1076, 1217, 1686
BccI	CCATC	6 cut(s)	323, 638, 710, 847, 1648, 1810
BciT130I	CCWGG	4 cut(s)	104, 500, 993, 1123
BcnI	CCSGG	1 cut(s)	749
BcoDI	GTCTC	3 cut(s)	541, 1271, 1442
BfaI	CTAG	3 cut(s)	641, 785, 1184
BfmI	CTRYAG	3 cut(s)	314, 1579, 1815
BglII	AGATCT	1 cut(s)	1270
BisI	GCNGC	6 cut(s)	287, 311, 314, 1065, 1206, 1700
BlsI	GCNGC	6 cut(s)	288, 312, 315, 1066, 1207, 1701
Bme1390I	CCNGG	5 cut(s)	104, 500, 749, 993, 1123
BmiI	GGNNCC	1 cut(s)	858
BmrFI	CCNGG	5 cut(s)	104, 500, 749, 993, 1123
BmsI	GCATC	1 cut(s)	541
BpmI	CTGGAG	2 cut(s)	523, 1295
BpuEI	CTTGAG	1 cut(s)	1057
BpuMI	CCSGG	1 cut(s)	749
BsaAI	YACGTR	1 cut(s)	671
BsaHI	GRCGYC	2 cut(s)	930, 1632
BsaI	GGTCTC	1 cut(s)	1442
BsaJI	CCNNGG	6 cut(s)	102, 103, 355, 499, 1107, 1158
BsaXI	ACNNNNNCTCC	2 cut(s)	858, 888
Bsc4I	CCNNNNNNNGG	3 cut(s)	141, 524, 1020
Bse118I	RCCGGY	3 cut(s)	517, 1054, 1067
Bse1I	ACTGG	2 cut(s)	348, 540
Bse21I	CCTNAGG	1 cut(s)	1432
Bse3DI	GCAATG	1 cut(s)	925
BseBI	CCWGG	4 cut(s)	104, 500, 993, 1123
BseDI	CCNNGG	6 cut(s)	102, 103, 355, 499, 1107, 1158
BseGI	GGATG	3 cut(s)	481, 1280, 1440
BseLI	CCNNNNNNNGG	3 cut(s)	141, 524, 1020
BseMI	GCAATG	1 cut(s)	925
BseMII	CTCAG	3 cut(s)	627, 1267, 1493
BseNI	ACTGG	2 cut(s)	348, 540
BseXI	GCAGC	6 cut(s)	273, 300, 322, 1076, 1217, 1686
BseYI	CCCAGC	3 cut(s)	134, 521, 616
BsgI	GTGCAG	2 cut(s)	329, 1083
BshFI	GGCC	6 cut(s)	145, 159, 354, 939, 1121, 1126
BsiHKAI	GWGCWC	2 cut(s)	73, 1178
BsiSI	CCGG	4 cut(s)	518, 749, 1055, 1068
BslI	CCNNNNNNNGG	3 cut(s)	141, 524, 1020
BsmAI	GTCTC	3 cut(s)	541, 1271, 1442
BsmI	GAATGC	1 cut(s)	1172
BsnI	GGCC	6 cut(s)	145, 159, 354, 939, 1121, 1126
Bso31I	GGTCTC	1 cut(s)	1442
Bsp1286I	GDGCHC	2 cut(s)	73, 1178
Bsp143I	GATC	9 cut(s)	107, 274, 462, 756, 781, 856, 910, 995, 1270
Bsp19I	CCATGG	2 cut(s)	1107, 1158
BspACI	CCGC	5 cut(s)	720, 764, 1018, 1071, 1250
BspANI	GGCC	6 cut(s)	145, 159, 354, 939, 1121, 1126
BspCNI	CTCAG	3 cut(s)	628, 1266, 1494
BspLI	GGNNCC	1 cut(s)	858
BspMAI	CTGCAG	1 cut(s)	318
BspPI	GGATC	7 cut(s)	115, 269, 751, 851, 864, 905, 1003
BspQI	GCTCTTC	1 cut(s)	1733
BspTNI	GGTCTC	1 cut(s)	1442
BsrBI	CCGCTC	1 cut(s)	1252
BsrDI	GCAATG	1 cut(s)	925
BsrFI	RCCGGY	3 cut(s)	517, 1054, 1067
BsrI	ACTGG	2 cut(s)	348, 540
BssAI	RCCGGY	3 cut(s)	517, 1054, 1067
BssECI	CCNNGG	6 cut(s)	102, 103, 355, 499, 1107, 1158
BssMI	GATC	9 cut(s)	107, 274, 462, 756, 781, 856, 910, 995, 1270
BssNAI	GTATAC	1 cut(s)	1778
BssNI	GRCGYC	2 cut(s)	930, 1632
BssT1I	CCWWGG	3 cut(s)	355, 1107, 1158
Bst1107I	GTATAC	1 cut(s)	1778
Bst2UI	CCWGG	4 cut(s)	104, 500, 993, 1123
Bst6I	CTCTTC	5 cut(s)	47, 1261, 1451, 1644, 1733
BstACI	GRCGYC	2 cut(s)	930, 1632
BstBAI	YACGTR	1 cut(s)	671
BstC8I	GCNNGC	5 cut(s)	335, 519, 1069, 1464, 1545
BstDEI	CTNAG	5 cut(s)	636, 861, 1253, 1432, 1502
BstDSI	CCRYGG	2 cut(s)	1107, 1158
BstF5I	GGATG	3 cut(s)	481, 1280, 1440
BstHHI	GCGC	1 cut(s)	1462
BstKTI	GATC	9 cut(s)	110, 277, 465, 759, 784, 859, 913, 998, 1273
BstMAI	GTCTC	3 cut(s)	541, 1271, 1442
BstMBI	GATC	9 cut(s)	107, 274, 462, 756, 781, 856, 910, 995, 1270
BstMWI	GCNNNNNNNGC	5 cut(s)	936, 945, 1064, 1118, 1705
BstNI	CCWGG	4 cut(s)	104, 500, 993, 1123
BstNSI	RCATGY	1 cut(s)	589
BstSCI	CCNGG	5 cut(s)	102, 498, 747, 991, 1121
BstSFI	CTRYAG	3 cut(s)	314, 1579, 1815
BstV1I	GCAGC	6 cut(s)	273, 300, 322, 1076, 1217, 1686
BstX2I	RGATCY	3 cut(s)	107, 856, 1270
BstYI	RGATCY	3 cut(s)	107, 856, 1270
BstZ17I	GTATAC	1 cut(s)	1778
Bsu36I	CCTNAGG	1 cut(s)	1432
BsuRI	GGCC	6 cut(s)	145, 159, 354, 939, 1121, 1126
BtgI	CCRYGG	2 cut(s)	1107, 1158
BtgZI	GCGATG	1 cut(s)	361
BtsCI	GGATG	3 cut(s)	481, 1280, 1440
BtsI	GCAGTG	2 cut(s)	281, 1869
BtsIMutI	CAGTG	6 cut(s)	281, 312, 355, 795, 1642, 1869
Cac8I	GCNNGC	5 cut(s)	335, 519, 1069, 1464, 1545
CaiI	CAGNNNCTG	1 cut(s)	514
CfoI	GCGC	1 cut(s)	1462
Cfr10I	RCCGGY	3 cut(s)	517, 1054, 1067
CseI	GACGC	2 cut(s)	919, 1787
Csp6I	GTAC	4 cut(s)	672, 711, 898, 1507
CspCI	CAANNNNNGTGG	2 cut(s)	1366, 1401
CviAII	CATG	8 cut(s)	5, 141, 415, 586, 1108, 1159, 1452, 1860
CviQI	GTAC	4 cut(s)	672, 711, 898, 1507
DdeI	CTNAG	5 cut(s)	636, 861, 1253, 1432, 1502
DpnI	GATC	9 cut(s)	109, 276, 464, 758, 783, 858, 912, 997, 1272
DpnII	GATC	9 cut(s)	107, 274, 462, 756, 781, 856, 910, 995, 1270
EaeI	YGGCCR	2 cut(s)	352, 1124
Eam1104I	CTCTTC	5 cut(s)	47, 1261, 1451, 1644, 1733
EarI	CTCTTC	5 cut(s)	47, 1261, 1451, 1644, 1733
Ecl136II	GAGCTC	2 cut(s)	71, 1176
Eco130I	CCWWGG	3 cut(s)	355, 1107, 1158
Eco24I	GRGCYC	2 cut(s)	73, 1178
Eco31I	GGTCTC	1 cut(s)	1442
Eco32I	GATATC	1 cut(s)	1576
Eco53kI	GAGCTC	2 cut(s)	71, 1176
Eco57I	CTGAAG	1 cut(s)	1374
Eco81I	CCTNAGG	1 cut(s)	1432
EcoICRI	GAGCTC	2 cut(s)	71, 1176
EcoRI	GAATTC	1 cut(s)	167
EcoRII	CCWGG	4 cut(s)	102, 498, 991, 1121
EcoRV	GATATC	1 cut(s)	1576
EcoT14I	CCWWGG	3 cut(s)	355, 1107, 1158
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	73, 1178
ErhI	CCWWGG	3 cut(s)	355, 1107, 1158
FaeI	CATG	8 cut(s)	8, 144, 418, 589, 1111, 1162, 1455, 1863
FalI	AAGNNNNNCTT	5 cut(s)	898, 930, 1727, 1759, 1858
FatI	CATG	8 cut(s)	4, 140, 414, 585, 1107, 1158, 1451, 1859
FauI	CCCGC	2 cut(s)	757, 1064
FblI	GTMKAC	3 cut(s)	225, 612, 1777
Fnu4HI	GCNGC	6 cut(s)	287, 311, 314, 1065, 1206, 1700
FokI	GGATG	3 cut(s)	468, 1267, 1427
FriOI	GRGCYC	2 cut(s)	73, 1178
Fsp4HI	GCNGC	6 cut(s)	287, 311, 314, 1065, 1206, 1700
FspBI	CTAG	3 cut(s)	641, 785, 1184
GlaI	GCGC	1 cut(s)	1461
GluI	GCNGC	6 cut(s)	287, 311, 314, 1065, 1206, 1700
GsaI	CCCAGC	3 cut(s)	138, 525, 620
GsuI	CTGGAG	2 cut(s)	523, 1295
HaeIII	GGCC	6 cut(s)	145, 159, 354, 939, 1121, 1126
HapII	CCGG	4 cut(s)	518, 749, 1055, 1068
HgaI	GACGC	2 cut(s)	919, 1787
HhaI	GCGC	1 cut(s)	1462
Hin1I	GRCGYC	2 cut(s)	930, 1632
Hin1II	CATG	8 cut(s)	8, 144, 418, 589, 1111, 1162, 1455, 1863
Hin6I	GCGC	1 cut(s)	1460
HinP1I	GCGC	1 cut(s)	1460
HincII	GTYRAC	1 cut(s)	1314
HindII	GTYRAC	1 cut(s)	1314
HindIII	AAGCTT	3 cut(s)	335, 689, 1706
HinfI	GANTC	3 cut(s)	422, 1372, 1534
HpaI	GTTAAC	1 cut(s)	1314
HpaII	CCGG	4 cut(s)	518, 749, 1055, 1068
HphI	GGTGA	3 cut(s)	122, 285, 1096
Hpy166II	GTNNAC	7 cut(s)	226, 244, 613, 823, 1314, 1732, 1778
Hpy188III	TCNNGA	8 cut(s)	122, 426, 1136, 1184, 1274, 1325, 1473, 1601
Hpy8I	GTNNAC	7 cut(s)	226, 244, 613, 823, 1314, 1732, 1778
Hpy99I	CGWCG	1 cut(s)	449
HpyAV	CCTTC	4 cut(s)	47, 59, 156, 998
HpyCH4IV	ACGT	2 cut(s)	670, 1632
HpyF10VI	GCNNNNNNNGC	5 cut(s)	936, 945, 1064, 1118, 1705
HpyF3I	CTNAG	5 cut(s)	636, 861, 1253, 1432, 1502
HpySE526I	ACGT	2 cut(s)	670, 1632
Hsp92I	GRCGYC	2 cut(s)	930, 1632
Hsp92II	CATG	8 cut(s)	8, 144, 418, 589, 1111, 1162, 1455, 1863
HspAI	GCGC	1 cut(s)	1460
KroI	GCCGGC	2 cut(s)	517, 1067
KroNI	GCCGGC	2 cut(s)	519, 1069
KspAI	GTTAAC	1 cut(s)	1314
Kzo9I	GATC	9 cut(s)	107, 274, 462, 756, 781, 856, 910, 995, 1270
LguI	GCTCTTC	1 cut(s)	1733
LmnI	GCTCC	2 cut(s)	68, 1202
Lsp1109I	GCAGC	6 cut(s)	273, 300, 322, 1076, 1217, 1686
LweI	GCATC	1 cut(s)	541
MaeI	CTAG	3 cut(s)	641, 785, 1184
MaeII	ACGT	2 cut(s)	670, 1632
MaeIII	GTNAC	1 cut(s)	1827
MalI	GATC	9 cut(s)	109, 276, 464, 758, 783, 858, 912, 997, 1272
MbiI	CCGCTC	1 cut(s)	1252
MboI	GATC	9 cut(s)	107, 274, 462, 756, 781, 856, 910, 995, 1270
MfeI	CAATTG	1 cut(s)	1195
MflI	RGATCY	3 cut(s)	107, 856, 1270
MhlI	GDGCHC	2 cut(s)	73, 1178
MlsI	TGGCCA	2 cut(s)	354, 1126
MluNI	TGGCCA	2 cut(s)	354, 1126
MmeI	TCCRAC	2 cut(s)	184, 1308
Mox20I	TGGCCA	2 cut(s)	354, 1126
Mph1103I	ATGCAT	1 cut(s)	6
MroNI	GCCGGC	2 cut(s)	517, 1067
MroXI	GAANNNNTTC	2 cut(s)	1045, 1362
MscI	TGGCCA	2 cut(s)	354, 1126
MseI	TTAA	9 cut(s)	693, 705, 792, 924, 942, 1313, 1427, 1527, 1758
Msp20I	TGGCCA	2 cut(s)	354, 1126
MspA1I	CMGCKG	1 cut(s)	313
MspI	CCGG	4 cut(s)	518, 749, 1055, 1068
MspR9I	CCNGG	5 cut(s)	104, 500, 749, 993, 1123
MunI	CAATTG	1 cut(s)	1195
Mva1269I	GAATGC	1 cut(s)	1172
MvaI	CCWGG	4 cut(s)	104, 500, 993, 1123
MwoI	GCNNNNNNNGC	5 cut(s)	936, 945, 1064, 1118, 1705
NaeI	GCCGGC	2 cut(s)	519, 1069
NciI	CCSGG	1 cut(s)	749
NcoI	CCATGG	2 cut(s)	1107, 1158
NdeII	GATC	9 cut(s)	107, 274, 462, 756, 781, 856, 910, 995, 1270
NgoMIV	GCCGGC	2 cut(s)	517, 1067
NlaIII	CATG	8 cut(s)	8, 144, 418, 589, 1111, 1162, 1455, 1863
NlaIV	GGNNCC	1 cut(s)	858
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	589
PasI	CCCWGGG	1 cut(s)	103
PciSI	GCTCTTC	1 cut(s)	1733
PcsI	WCGNNNNNNNCGW	2 cut(s)	441, 683
PctI	GAATGC	1 cut(s)	1172
PdiI	GCCGGC	2 cut(s)	519, 1069
PdmI	GAANNNNTTC	2 cut(s)	1045, 1362
PfeI	GAWTC	3 cut(s)	422, 1372, 1534
PflMI	CCANNNNNTGG	1 cut(s)	141
PfoI	TCCNGGA	1 cut(s)	991
PkrI	GCNGC	6 cut(s)	288, 312, 315, 1066, 1207, 1701
Ppu21I	YACGTR	1 cut(s)	671
PsiI	TTATAA	2 cut(s)	180, 1677
Psp124BI	GAGCTC	2 cut(s)	73, 1178
Psp6I	CCWGG	4 cut(s)	102, 498, 991, 1121
PspFI	CCCAGC	3 cut(s)	134, 521, 616
PspGI	CCWGG	4 cut(s)	102, 498, 991, 1121
PspN4I	GGNNCC	1 cut(s)	858
PstI	CTGCAG	1 cut(s)	318
PstNI	CAGNNNCTG	1 cut(s)	514
PsuI	RGATCY	3 cut(s)	107, 856, 1270
PvuII	CAGCTG	1 cut(s)	313
RsaI	GTAC	4 cut(s)	673, 712, 899, 1508
RsaNI	GTAC	4 cut(s)	672, 711, 898, 1507
SacI	GAGCTC	2 cut(s)	73, 1178
SapI	GCTCTTC	1 cut(s)	1733
SaqAI	TTAA	9 cut(s)	693, 705, 792, 924, 942, 1313, 1427, 1527, 1758
SatI	GCNGC	6 cut(s)	287, 311, 314, 1065, 1206, 1700
Sau3AI	GATC	9 cut(s)	107, 274, 462, 756, 781, 856, 910, 995, 1270
ScrFI	CCNGG	5 cut(s)	104, 500, 749, 993, 1123
SduI	GDGCHC	2 cut(s)	73, 1178
SfaNI	GCATC	1 cut(s)	541
SfcI	CTRYAG	3 cut(s)	314, 1579, 1815
SmlI	CTYRAG	1 cut(s)	1036
SmoI	CTYRAG	1 cut(s)	1036
SsiI	CCGC	5 cut(s)	720, 764, 1018, 1071, 1250
SspMI	CTAG	3 cut(s)	641, 785, 1184
SstI	GAGCTC	2 cut(s)	73, 1178
StyD4I	CCNGG	5 cut(s)	102, 498, 747, 991, 1121
StyI	CCWWGG	3 cut(s)	355, 1107, 1158
TaiI	ACGT	2 cut(s)	673, 1635
TaqI	TCGA	2 cut(s)	686, 1215
TatI	WGTACW	1 cut(s)	710
TfiI	GAWTC	3 cut(s)	422, 1372, 1534
Tru1I	TTAA	9 cut(s)	693, 705, 792, 924, 942, 1313, 1427, 1527, 1758
Tru9I	TTAA	9 cut(s)	693, 705, 792, 924, 942, 1313, 1427, 1527, 1758
TscAI	CASTG	6 cut(s)	288, 312, 355, 802, 1642, 1876
TseI	GCWGC	6 cut(s)	286, 310, 313, 1064, 1205, 1699
TspDTI	ATGAA	4 cut(s)	566, 1250, 1800, 1823
TspGWI	ACGGA	3 cut(s)	243, 612, 840
TspRI	CASTG	6 cut(s)	288, 312, 355, 802, 1642, 1876
Van91I	CCANNNNNTGG	1 cut(s)	141
XapI	RAATTY	5 cut(s)	167, 207, 1114, 1416, 1624
XbaI	TCTAGA	1 cut(s)	1183
XceI	RCATGY	1 cut(s)	589
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1114, 1156
XmiI	GTMKAC	3 cut(s)	225, 612, 1777
XmnI	GAANNNNTTC	2 cut(s)	1045, 1362
XspI	CTAG	3 cut(s)	641, 785, 1184
ZraI	GACGTC	1 cut(s)	1633
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.