Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0004215

Physical Location & Seq

Genomic Coordinates Forward (+)

32294214 .. 32297068

Gene Structure 2855 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG282600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

ATGCATAGGATTATGGCTTGCACTGGCATTGCTATCCTTCTCTTCTCACTATATTCTCTATGTGAAGGAGCTCAACAAAACAACGATTCAGGGCACATACGCCTGGGATCTCCACTCTTTCCAGAAACTCACCCCAGCTCATGGCATTCTGCCTCTGGCCTGTTTGAATTCGGCTTTTATCAGCAAGGAAATGGTTTTGCTGTTGGAATTTGGTTAGTGGGAGTAGACGGAAACACAACTGTAAACACAACTGTATGGACAGCAAACCGTGATGATCCCCCACTGCTGCCCTCACCAAATAATACAGTGCAGCTGCAGTTAGCCAATGATGGCAAGCTTGTTCTAACCAGTGACCAAGGTCATACAAAAGTGACCAAGGTCATCGCAAGTGCAACAAACGGTTCTGTTTTCTCTGCCTCCATGCTTGATTCTGGAAACTTCGTTCTTCAAGATGAAAACAATGAAGTGATCTGGGAGAGTTTCAGTCATCCTACTGATACTATCCTGGGTGGTCAGACTCTGCCGGCTGGGGGTCAATTAGTCTCCAGTTTGTCCGATGCTGACCACTCAACAGGACATTTTCATCTCAACATGCAGCCTGACGGAAACCTTGTTCTGTACCCAGAAAACTCTGAAAACTCTCCGATAGATGCCTACTATGCTACAGATACATATGGGATCTTGGACCTCTATCTCAACAGTACAGATGGCAGTCTTGCTCTAATCAACACCACCAGCTCGGAAGTTTACAGTGTCATCAATTATGATAATCTAGCCAGTAATGATGATCTAGCCAATAACACTGTATATCGGGCAACTGTTGGCATAAACGGAGTATTAAGGGTGTATTCTCATCGGATGGATCCTGACAAAGGCAAACTCAAAGCACCTGTTATTATGTGGTACAAACCAGATGATCCTTGCGATGTTTATGGCCTCTGTGGCCTTAACAGCTATTGCACACTCAATGATGACCAACCAGCCTGTCTTTGCCTTCCTGGATCAGATTACGCTGACCTCAACCGCAGGACTATGGGTTGCTTGAGAAACTATTCAGAACCGGCATGTGCAGCTGGCGGGAAAGAGAATACGACCTTTTATGACATACTCACCATGGAAAATATGGCCTGGGAAGATACTCCTGACTTTAAAGCCACAATGACCATGGAAGAATGCAAGAGGTCTTGTCTAGAGGACTGCAATTGCGGAGCAGCTCTGTTCGACGGGAAAAATTGTATGAAACAGAAGCCACCTCTCAGATATGTGAGAAGAGATGTGCAGCAATCCAACACAGCTTTCTTCAAGGTAAGCAACTTAACAAGTCCTGAAAGCAAGAATAATGGAACTGAAACTAAAGAACCATTTCCGATGACTCCCACTACGGTTGTGCAAATTCTTGTTTTAACCTTAGGTCTCATCCTCTTCTCATGTGTTGCGCTTGCAATAACTGGATTTTACATTTTCAAAATTCGAGTTCTGAGGTACAAAAGGCTGACAGAGGTTAATGGGAATCTGAGGCTGGCTGATGAGGAACTCACTATGAGAGTTTTTTCATACAACGAGCTGAAAGGGGCTACAAATGGTTTCAAGCAAGAATTGGGGAAGGGCTCCTTCGGAACAGTTTACAAAGGGGCTCTAAATAGAGGGAAAAAACTCATCGCAGTGAAAAGACTAGAGAAGTTGGTGGAAGAAGGTGAGAGGGAGTTTCGAGCGGAGATGCAAGCAATTGGAAGAACTCACCACAAGAACTTAGTTCGATTGCTGGGTTACTCTGCTGAGGACTCGAAAAGGCTCCTGGTCTATGAATATATGAGCAATGGCTCCCTTGCAGATCTTCTTTTCAAGAAAGAATGGCATCCAGCTTGGGATGAAAGAGTGAGAATTGCAGTTGATGTCGCAAGAGGTCTCCTCTATTTACATGAAGAGTGCAAGTCCCCTGTCATTCATTGCGACATAAAGCCTCAAAACATTCTGATGGATGAATTTTGGAATGCTAAAATCTCTGATTTTGGGCTTGCAAAACTGCTAATGCCGGATCAAACAAGAACCTTCACAGGGATAAGAGGGACAAGAGGGTATTTGGCACCCGAATGGCAAAAGAACACTCCAATATCAGTGAAGGCAGATATCTACAGTTTTGGTATAGTGCTTCTTGAACTTGTGTGTTGCAGGAGGAACTTGGACGTCAGTGTTACAGCAGAGGAGATAGTTCTTTCTACTTGGGTTTATAAGTGCTTCGTCAGTAGAGAGCTGCATAAGCTTATTGTGGGTGGCGAAGAAGTGAACAAGAAGAGCTTGGAGAATATGGTTAAGGTGGGATTATGGTGTATACAAGATGAACCAGCTCTGCGTCCATCAATGAAGTCTGTAGTATTGATGTTACAAGGCATTACTGATATATCTATCCCTCCATGTCCAACCACTGCTTCTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

811

Amino Acids

90.13

Weight (kDa)

5.58

Isoelectric Point (pI)

37.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	83 - 174	4.1e-18	D-mannose binding lectin
S_locus_glycop	PF00954	297 - 334	1.3e-06	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	529 - 792	2.8e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	530 - 791	5.6e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004215)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23400
prunus_persica	Prupe.6G165300_v2.0.a1 Prupe.6G165500_v2.0.a1 Prupe.6G165500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118691 RchiOBHm_Chr2g0118751 RchiOBHm_Chr2g0118771
rosa_laevigata	RLG00000018420
rosa_multiflora	Rmu_co8322425.1_g000001 Rmu_sc0001814.1_g000023 Rmu_sc0001814.1_g000024 Rmu_sc0001814.1_g000031 Rmu_sc0002831.1_g000032 Rmu_sc0003564.1_g000001 Rmu_sc0004345.1_g000011
rosa_roxburghii	Rroxscaffold_2G00124740 Rroxscaffold_2G00124750 Rroxscaffold_2G00124840 Rroxscaffold_2G00124870 Rroxscaffold_2G00124880 Rroxscaffold_2G00125530
rosa_rugosa	Rorug02G0218500
rosa_samantha	Rh2AG274800 Rh2AG275100 Rh2AG275400 Rh2BG286900 Rh2BG287300 Rh2DG282600 Rh2DG301600 Rh2DG301800
rosa_wichuraiana	Rw2G021860 Rw2G021880 Rw2G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2229
AatII	GACGTC	1 cut(s)	2187
AccB1I	GGYRCC	1 cut(s)	2083
AccB7I	CCANNNNNTGG	1 cut(s)	141
AccBSI	CCGCTC	1 cut(s)	1712
AccI	GTMKAC	2 cut(s)	225, 2329
AciI	CCGC	4 cut(s)	1024, 1077, 1206, 1712
AclWI	GGATC	8 cut(s)	115, 269, 686, 857, 870, 911, 1009, 2043
AcsI	RAATTY	5 cut(s)	167, 207, 1392, 1467, 1982
AcyI	GRCGYC	1 cut(s)	2184
AfaI	GTAC	4 cut(s)	620, 703, 905, 1484
AfiI	CCNNNNNNNGG	4 cut(s)	141, 530, 872, 2055
AgsI	TTSAA	7 cut(s)	167, 449, 1303, 1465, 1588, 1843, 2156
AjnI	CCWGG	5 cut(s)	102, 504, 997, 1127, 1794
AjuI	GAANNNNNNNTTGG	3 cut(s)	1280, 1312, 2410
AloI	GAACNNNNNNTCC	4 cut(s)	426, 458, 597, 629
Alw21I	GWGCWC	1 cut(s)	73
Alw26I	GTCTC	3 cut(s)	547, 1418, 1910
AlwI	GGATC	8 cut(s)	115, 269, 686, 857, 870, 911, 1009, 2043
AlwNI	CAGNNNCTG	1 cut(s)	520
AoxI	GGCC	4 cut(s)	157, 934, 943, 1125
ApeKI	GCWGC	8 cut(s)	286, 310, 313, 595, 1070, 1211, 1279, 2251
ApoI	RAATTY	5 cut(s)	167, 207, 1392, 1467, 1982
Asp700I	GAANNNNTTC	2 cut(s)	1051, 1362
AspLEI	GCGC	1 cut(s)	1438
AspS9I	GGNCC	1 cut(s)	685
AsuHPI	GGTGA	5 cut(s)	122, 285, 1102, 1706, 1730
AvaII	GGWCC	1 cut(s)	685
AxyI	CCTNAGG	1 cut(s)	1408
BaeGI	GKGCMC	1 cut(s)	96
BamHI	GGATCC	1 cut(s)	862
BanI	GGYRCC	1 cut(s)	2083
BanII	GRGCYC	3 cut(s)	73, 1610, 1636
Bbv12I	GWGCWC	1 cut(s)	73
BbvCI	CCTCAGC	1 cut(s)	1776
BbvI	GCAGC	8 cut(s)	273, 300, 322, 607, 1082, 1223, 1291, 2238
BccI	CCATC	5 cut(s)	323, 701, 853, 1969, 2362
BciT130I	CCWGG	5 cut(s)	104, 506, 999, 1129, 1796
BcoDI	GTCTC	3 cut(s)	547, 1418, 1910
BfaI	CTAG	4 cut(s)	773, 791, 1190, 1673
BfmI	CTRYAG	4 cut(s)	314, 663, 2131, 2367
BglI	GCCNNNNNGGC	1 cut(s)	942
BglII	AGATCT	1 cut(s)	1831
BisI	GCNGC	8 cut(s)	287, 311, 314, 596, 1071, 1212, 1280, 2252
BlsI	GCNGC	8 cut(s)	288, 312, 315, 597, 1072, 1213, 1281, 2253
Bme1390I	CCNGG	5 cut(s)	104, 506, 999, 1129, 1796
Bme18I	GGWCC	1 cut(s)	685
BmgT120I	GGNCC	1 cut(s)	685
BmiI	GGNNCC	5 cut(s)	864, 1609, 1793, 1822, 2085
BmrFI	CCNGG	5 cut(s)	104, 506, 999, 1129, 1796
BmsI	GCATC	4 cut(s)	547, 640, 1707, 1864
BoxI	GACNNNNGTC	2 cut(s)	357, 377
BplI	GAGNNNNNCTC	2 cut(s)	1893, 1925
BpmI	CTGGAG	1 cut(s)	529
Bpu10I	CCTNAGC	1 cut(s)	1776
BpuEI	CTTGAG	1 cut(s)	1063
BsaHI	GRCGYC	1 cut(s)	2184
BsaI	GGTCTC	2 cut(s)	1418, 1910
BsaJI	CCNNGG	7 cut(s)	103, 355, 375, 505, 1113, 1128, 1164
Bsc4I	CCNNNNNNNGG	4 cut(s)	141, 530, 872, 2055
Bse118I	RCCGGY	2 cut(s)	523, 1060
Bse1I	ACTGG	5 cut(s)	28, 348, 546, 777, 1453
Bse21I	CCTNAGG	1 cut(s)	1408
Bse3DI	GCAATG	3 cut(s)	27, 1822, 1945
BseBI	CCWGG	5 cut(s)	104, 506, 999, 1129, 1796
BseDI	CCNNGG	7 cut(s)	103, 355, 375, 505, 1113, 1128, 1164
BseGI	GGATG	6 cut(s)	487, 864, 1416, 1855, 1873, 1984
BseLI	CCNNNNNNNGG	4 cut(s)	141, 530, 872, 2055
BseMI	GCAATG	3 cut(s)	27, 1822, 1945
BseMII	CTCAG	4 cut(s)	1270, 1469, 1505, 1767
BseNI	ACTGG	5 cut(s)	28, 348, 546, 777, 1453
BseRI	GAGGAG	2 cut(s)	1898, 2216
BseSI	GKGCMC	1 cut(s)	96
BseXI	GCAGC	8 cut(s)	273, 300, 322, 607, 1082, 1223, 1291, 2238
BseYI	CCCAGC	3 cut(s)	134, 527, 1762
BsgI	GTGCAG	3 cut(s)	329, 1089, 1298
BshFI	GGCC	4 cut(s)	159, 936, 945, 1127
BshNI	GGYRCC	1 cut(s)	2083
BsiHKAI	GWGCWC	1 cut(s)	73
BsiSI	CCGG	3 cut(s)	524, 1061, 2033
BslFI	GGGAC	2 cut(s)	1918, 2080
BslI	CCNNNNNNNGG	4 cut(s)	141, 530, 872, 2055
BsmAI	GTCTC	3 cut(s)	547, 1418, 1910
BsmFI	GGGAC	2 cut(s)	1918, 2080
BsmI	GAATGC	3 cut(s)	145, 1178, 1996
BsnI	GGCC	4 cut(s)	159, 936, 945, 1127
Bso31I	GGTCTC	2 cut(s)	1418, 1910
Bsp1286I	GDGCHC	4 cut(s)	73, 96, 1610, 1636
Bsp19I	CCATGG	2 cut(s)	1113, 1164
BspACI	CCGC	4 cut(s)	1024, 1077, 1206, 1712
BspANI	GGCC	4 cut(s)	159, 936, 945, 1127
BspCNI	CTCAG	4 cut(s)	1269, 1470, 1506, 1768
BspLI	GGNNCC	5 cut(s)	864, 1609, 1793, 1822, 2085
BspMAI	CTGCAG	1 cut(s)	318
BspPI	GGATC	8 cut(s)	115, 269, 686, 857, 870, 911, 1009, 2043
BspQI	GCTCTTC	1 cut(s)	2285
BspT107I	GGYRCC	1 cut(s)	2083
BspTNI	GGTCTC	2 cut(s)	1418, 1910
BsrBI	CCGCTC	1 cut(s)	1712
BsrDI	GCAATG	3 cut(s)	27, 1822, 1945
BsrFI	RCCGGY	2 cut(s)	523, 1060
BsrI	ACTGG	5 cut(s)	28, 348, 546, 777, 1453
BssAI	RCCGGY	2 cut(s)	523, 1060
BssECI	CCNNGG	7 cut(s)	103, 355, 375, 505, 1113, 1128, 1164
BssNAI	GTATAC	1 cut(s)	2330
BssNI	GRCGYC	1 cut(s)	2184
BssT1I	CCWWGG	4 cut(s)	355, 375, 1113, 1164
Bst1107I	GTATAC	1 cut(s)	2330
Bst2UI	CCWGG	5 cut(s)	104, 506, 999, 1129, 1796
Bst6I	CTCTTC	5 cut(s)	47, 1264, 1427, 1917, 2285
BstACI	GRCGYC	1 cut(s)	2184
BstC8I	GCNNGC	8 cut(s)	19, 335, 525, 1075, 1440, 1521, 1722, 2016
BstDEI	CTNAG	6 cut(s)	1256, 1408, 1478, 1514, 1750, 1776
BstDSI	CCRYGG	2 cut(s)	1113, 1164
BstENI	CCTNNNNNAGG	1 cut(s)	870
BstF5I	GGATG	6 cut(s)	487, 864, 1416, 1855, 1873, 1984
BstHHI	GCGC	1 cut(s)	1438
BstMAI	GTCTC	3 cut(s)	547, 1418, 1910
BstMWI	GCNNNNNNNGC	5 cut(s)	659, 942, 951, 1070, 2257
BstNI	CCWGG	5 cut(s)	104, 506, 999, 1129, 1796
BstNSI	RCATGY	2 cut(s)	595, 1068
BstPAI	GACNNNNGTC	2 cut(s)	357, 377
BstSCI	CCNGG	5 cut(s)	102, 504, 997, 1127, 1794
BstSFI	CTRYAG	4 cut(s)	314, 663, 2131, 2367
BstSLI	GKGCMC	1 cut(s)	96
BstV1I	GCAGC	8 cut(s)	273, 300, 322, 607, 1082, 1223, 1291, 2238
BstX2I	RGATCY	4 cut(s)	107, 678, 862, 1831
BstYI	RGATCY	4 cut(s)	107, 678, 862, 1831
BstZ17I	GTATAC	1 cut(s)	2330
Bsu36I	CCTNAGG	1 cut(s)	1408
BsuRI	GGCC	4 cut(s)	159, 936, 945, 1127
BtgI	CCRYGG	2 cut(s)	1113, 1164
BtgZI	GCGATG	3 cut(s)	367, 939, 1642
BtsCI	GGATG	6 cut(s)	487, 864, 1416, 1855, 1873, 1984
BtsI	GCAGTG	3 cut(s)	281, 1668, 2421
Cac8I	GCNNGC	8 cut(s)	19, 335, 525, 1075, 1440, 1521, 1722, 2016
CaiI	CAGNNNCTG	1 cut(s)	520
CfoI	GCGC	1 cut(s)	1438
Cfr10I	RCCGGY	2 cut(s)	523, 1060
Cfr13I	GGNCC	1 cut(s)	685
CseI	GACGC	1 cut(s)	2339
Csp6I	GTAC	4 cut(s)	619, 702, 904, 1483
CspCI	CAANNNNNGTGG	2 cut(s)	1366, 1401
CviAII	CATG	9 cut(s)	141, 421, 592, 1065, 1114, 1165, 1428, 1919, 2412
CviQI	GTAC	4 cut(s)	619, 702, 904, 1483
DdeI	CTNAG	6 cut(s)	1256, 1408, 1478, 1514, 1750, 1776
DraI	TTTAAA	1 cut(s)	1150
Eam1104I	CTCTTC	5 cut(s)	47, 1264, 1427, 1917, 2285
EarI	CTCTTC	5 cut(s)	47, 1264, 1427, 1917, 2285
Ecl136II	GAGCTC	1 cut(s)	71
Eco130I	CCWWGG	4 cut(s)	355, 375, 1113, 1164
Eco24I	GRGCYC	3 cut(s)	73, 1610, 1636
Eco31I	GGTCTC	2 cut(s)	1418, 1910
Eco32I	GATATC	1 cut(s)	2128
Eco47I	GGWCC	1 cut(s)	685
Eco53kI	GAGCTC	1 cut(s)	71
Eco81I	CCTNAGG	1 cut(s)	1408
EcoICRI	GAGCTC	1 cut(s)	71
EcoNI	CCTNNNNNAGG	1 cut(s)	870
EcoRI	GAATTC	1 cut(s)	167
EcoRII	CCWGG	5 cut(s)	102, 504, 997, 1127, 1794
EcoRV	GATATC	1 cut(s)	2128
EcoT14I	CCWWGG	4 cut(s)	355, 375, 1113, 1164
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	3 cut(s)	73, 1610, 1636
ErhI	CCWWGG	4 cut(s)	355, 375, 1113, 1164
FaeI	CATG	9 cut(s)	144, 424, 595, 1068, 1117, 1168, 1431, 1922, 2415
FalI	AAGNNNNNCTT	4 cut(s)	1595, 1627, 2279, 2311
FaqI	GGGAC	2 cut(s)	1918, 2080
FatI	CATG	9 cut(s)	140, 420, 591, 1064, 1113, 1164, 1427, 1918, 2411
FauI	CCCGC	1 cut(s)	1070
FauNDI	CATATG	1 cut(s)	673
FblI	GTMKAC	2 cut(s)	225, 2329
Fnu4HI	GCNGC	8 cut(s)	287, 311, 314, 596, 1071, 1212, 1280, 2252
FokI	GGATG	6 cut(s)	474, 871, 1403, 1842, 1880, 1991
FriOI	GRGCYC	3 cut(s)	73, 1610, 1636
Fsp4HI	GCNGC	8 cut(s)	287, 311, 314, 596, 1071, 1212, 1280, 2252
FspBI	CTAG	4 cut(s)	773, 791, 1190, 1673
GlaI	GCGC	1 cut(s)	1437
GluI	GCNGC	8 cut(s)	287, 311, 314, 596, 1071, 1212, 1280, 2252
GsaI	CCCAGC	3 cut(s)	138, 531, 1766
GsuI	CTGGAG	1 cut(s)	529
HaeIII	GGCC	4 cut(s)	159, 936, 945, 1127
HapII	CCGG	3 cut(s)	524, 1061, 2033
HgaI	GACGC	1 cut(s)	2339
HhaI	GCGC	1 cut(s)	1438
Hin1I	GRCGYC	1 cut(s)	2184
Hin1II	CATG	9 cut(s)	144, 424, 595, 1068, 1117, 1168, 1431, 1922, 2415
Hin6I	GCGC	1 cut(s)	1436
HinP1I	GCGC	1 cut(s)	1436
HindIII	AAGCTT	2 cut(s)	335, 2258
HinfI	GANTC	6 cut(s)	86, 428, 517, 1372, 1510, 1781
HpaII	CCGG	3 cut(s)	524, 1061, 2033
HphI	GGTGA	5 cut(s)	122, 285, 1102, 1706, 1730
Hpy166II	GTNNAC	6 cut(s)	226, 244, 748, 1624, 2284, 2330
Hpy188III	TCNNGA	9 cut(s)	122, 432, 449, 866, 1142, 1190, 1325, 1843, 2153
Hpy8I	GTNNAC	6 cut(s)	226, 244, 748, 1624, 2284, 2330
Hpy99I	CGWCG	1 cut(s)	1226
HpyAV	CCTTC	8 cut(s)	47, 59, 1004, 1597, 1621, 1685, 2059, 2113
HpyCH4IV	ACGT	1 cut(s)	2184
HpyF10VI	GCNNNNNNNGC	5 cut(s)	659, 942, 951, 1070, 2257
HpyF3I	CTNAG	6 cut(s)	1256, 1408, 1478, 1514, 1750, 1776
HpySE526I	ACGT	1 cut(s)	2184
Hsp92I	GRCGYC	1 cut(s)	2184
Hsp92II	CATG	9 cut(s)	144, 424, 595, 1068, 1117, 1168, 1431, 1922, 2415
HspAI	GCGC	1 cut(s)	1436
KroI	GCCGGC	1 cut(s)	523
KroNI	GCCGGC	1 cut(s)	525
LguI	GCTCTTC	1 cut(s)	2285
LmnI	GCTCC	5 cut(s)	68, 1208, 1613, 1797, 1826
Lsp1109I	GCAGC	8 cut(s)	273, 300, 322, 607, 1082, 1223, 1291, 2238
LweI	GCATC	4 cut(s)	547, 640, 1707, 1864
MaeI	CTAG	4 cut(s)	773, 791, 1190, 1673
MaeII	ACGT	1 cut(s)	2184
MaeIII	GTNAC	5 cut(s)	350, 370, 1766, 2191, 2379
MbiI	CCGCTC	1 cut(s)	1712
MfeI	CAATTG	2 cut(s)	1201, 1725
MflI	RGATCY	4 cut(s)	107, 678, 862, 1831
MhlI	GDGCHC	4 cut(s)	73, 96, 1610, 1636
MlyI	GAGTC	3 cut(s)	511, 1366, 1775
MmeI	TCCRAC	2 cut(s)	184, 1311
Mph1103I	ATGCAT	1 cut(s)	6
MroNI	GCCGGC	1 cut(s)	523
MroXI	GAANNNNTTC	2 cut(s)	1051, 1362
MseI	TTAA	7 cut(s)	839, 948, 1149, 1316, 1403, 1503, 2310
MslI	CAYNNNNRTG	3 cut(s)	1661, 1973, 2089
MspA1I	CMGCKG	2 cut(s)	313, 1073
MspI	CCGG	3 cut(s)	524, 1061, 2033
MspR9I	CCNGG	5 cut(s)	104, 506, 999, 1129, 1796
MunI	CAATTG	2 cut(s)	1201, 1725
Mva1269I	GAATGC	3 cut(s)	145, 1178, 1996
MvaI	CCWGG	5 cut(s)	104, 506, 999, 1129, 1796
MwoI	GCNNNNNNNGC	5 cut(s)	659, 942, 951, 1070, 2257
NaeI	GCCGGC	1 cut(s)	525
NcoI	CCATGG	2 cut(s)	1113, 1164
NdeI	CATATG	1 cut(s)	673
NgoMIV	GCCGGC	1 cut(s)	523
NlaIII	CATG	9 cut(s)	144, 424, 595, 1068, 1117, 1168, 1431, 1922, 2415
NlaIV	GGNNCC	5 cut(s)	864, 1609, 1793, 1822, 2085
NmuCI	GTSAC	2 cut(s)	350, 370
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	595, 1068
PciSI	GCTCTTC	1 cut(s)	2285
PctI	GAATGC	3 cut(s)	145, 1178, 1996
PdiI	GCCGGC	1 cut(s)	525
PdmI	GAANNNNTTC	2 cut(s)	1051, 1362
PfeI	GAWTC	3 cut(s)	86, 428, 1510
PflMI	CCANNNNNTGG	1 cut(s)	141
PfoI	TCCNGGA	1 cut(s)	997
PkrI	GCNGC	8 cut(s)	288, 312, 315, 597, 1072, 1213, 1281, 2253
PleI	GAGTC	3 cut(s)	511, 1366, 1775
PpsI	GAGTC	3 cut(s)	511, 1366, 1775
PshAI	GACNNNNGTC	2 cut(s)	357, 377
PsiI	TTATAA	1 cut(s)	2229
Psp124BI	GAGCTC	1 cut(s)	73
Psp6I	CCWGG	5 cut(s)	102, 504, 997, 1127, 1794
PspFI	CCCAGC	3 cut(s)	134, 527, 1762
PspGI	CCWGG	5 cut(s)	102, 504, 997, 1127, 1794
PspN4I	GGNNCC	5 cut(s)	864, 1609, 1793, 1822, 2085
PspPI	GGNCC	1 cut(s)	685
PstI	CTGCAG	1 cut(s)	318
PstNI	CAGNNNCTG	1 cut(s)	520
PsuI	RGATCY	4 cut(s)	107, 678, 862, 1831
PvuII	CAGCTG	2 cut(s)	313, 1073
RsaI	GTAC	4 cut(s)	620, 703, 905, 1484
RsaNI	GTAC	4 cut(s)	619, 702, 904, 1483
RseI	CAYNNNNRTG	3 cut(s)	1661, 1973, 2089
SacI	GAGCTC	1 cut(s)	73
SapI	GCTCTTC	1 cut(s)	2285
SaqAI	TTAA	7 cut(s)	839, 948, 1149, 1316, 1403, 1503, 2310
SatI	GCNGC	8 cut(s)	287, 311, 314, 596, 1071, 1212, 1280, 2252
Sau96I	GGNCC	1 cut(s)	685
SchI	GAGTC	3 cut(s)	511, 1366, 1775
ScrFI	CCNGG	5 cut(s)	104, 506, 999, 1129, 1796
SduI	GDGCHC	4 cut(s)	73, 96, 1610, 1636
SfaNI	GCATC	4 cut(s)	547, 640, 1707, 1864
SfcI	CTRYAG	4 cut(s)	314, 663, 2131, 2367
SfiI	GGCCNNNNNGGCC	1 cut(s)	942
SinI	GGWCC	1 cut(s)	685
SmiMI	CAYNNNNRTG	3 cut(s)	1661, 1973, 2089
SmlI	CTYRAG	1 cut(s)	1042
SmoI	CTYRAG	1 cut(s)	1042
SsiI	CCGC	4 cut(s)	1024, 1077, 1206, 1712
SspMI	CTAG	4 cut(s)	773, 791, 1190, 1673
SstI	GAGCTC	1 cut(s)	73
StyD4I	CCNGG	5 cut(s)	102, 504, 997, 1127, 1794
StyI	CCWWGG	4 cut(s)	355, 375, 1113, 1164
TaiI	ACGT	1 cut(s)	2187
TaqI	TCGA	5 cut(s)	1221, 1471, 1708, 1756, 1784
TatI	WGTACW	1 cut(s)	701
TfiI	GAWTC	3 cut(s)	86, 428, 1510
Tru1I	TTAA	7 cut(s)	839, 948, 1149, 1316, 1403, 1503, 2310
Tru9I	TTAA	7 cut(s)	839, 948, 1149, 1316, 1403, 1503, 2310
TseFI	GTSAC	2 cut(s)	350, 370
TseI	GCWGC	8 cut(s)	286, 310, 313, 595, 1070, 1211, 1279, 2251
Tsp45I	GTSAC	2 cut(s)	350, 370
TspGWI	ACGGA	3 cut(s)	243, 618, 846
Van91I	CCANNNNNTGG	1 cut(s)	141
VpaK11BI	GGWCC	1 cut(s)	685
XagI	CCTNNNNNAGG	1 cut(s)	870
XapI	RAATTY	5 cut(s)	167, 207, 1392, 1467, 1982
XbaI	TCTAGA	1 cut(s)	1189
XceI	RCATGY	2 cut(s)	595, 1068
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1120, 1162
XmiI	GTMKAC	2 cut(s)	225, 2329
XmnI	GAANNNNTTC	2 cut(s)	1051, 1362
XspI	CTAG	4 cut(s)	773, 791, 1190, 1673
ZraI	GACGTC	1 cut(s)	2185
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.