Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003564.1

Orthogroup ID

OG0004215

Physical Location & Seq

Genomic Coordinates Reverse (-)

766 .. 3192

Gene Structure 2427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003564.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

atgcataggattatggcttccattggcattgctatccttctcttctcaacacattctctctgtgaaggagctcaacaaaacaacgattctaggcacatacgcctgggatcttcagtctttccagaagctcacccccgctcatggccttctgcctctggcctgtttgaattcggcttttatcagcaaggaaatggttttgcagttggaatttggttggtgggagtagatggaaacacaactgtatggacagcaaaccgtgatgatcccccactgctgccctcaccaaataatacagtgcagctgcagttagccactgatggcaagcttcttctaatgagtggccaaggtcataaaaaagtagtcatcgcaagtgcaacaaacggttctgtttcctctgcctccatgcttgattctggaaacttcgttctttacgacgaaaactataaagtgatctgggagagtttcaatcatcctactgatactatcctgggtggtcagactctgccggctgggggtcaattagtctccagtttgtccgatgctgaccactcaacaggacattttcatctcaacatgcaggctgacggaaaccttgttctctacccagcaaactctgaaaactctccgatagatgcctactatgctacagatacttggaggaacttgacgcttaatctccatcttaatagtacagatggcggtcttgctctaatcaacaccaccagctcggaagtttacagggtcatcagtagcggtagtggtaatgatgttctagccattaacagtgtatatcgggcaactgttagcgtgaacggagttctacgggtgtattctcatcagatggatcctgacaaaggcaaactccaagcacctgttattatgtggtacaaaccagatgatccttgcgatgttaatggcgtgtgtggccttaacagctattgcacactcaatgatggccaaccagactgtctttgccttcctggatcagattacgctgacctcaacagcaggactatggtttgcttgagaaactattcagaaccggcatgtgcagctggcgggaaagagaatacaaccttttatgacatagtcaccatggaaaatatggcctgggtagatactcctgactttgaagccacaatgaccatagaagaatgcaagaggtcttgtctagaggactgcaattgtggagcagctctgttcgagcagacaaagtgtatgaaacaaaagccaccactcagatattggagaagagatctgcagaaatccaacacagctttcttcaaggtaagcaacttaacaagtcctgaaagcaagaataatggaactgaaactaaagaacccactacggttgttatccgaagcaagaaagtcattgtgcaaattcttgttttaaccttgggtctcatcctcttctcatgtgttgcgcttgcaatatctggattttacattttcaaaattcgagttctgaggtacaaaaggctgacagaggttaatgggaatctggggctggctgatgaggaactcactatgagagttttttcgtacaacgagctgaaaagggctacaaatggtttcaagcaagaattggggaagggctccttcggagcagtttacaaaggggctctaaatagagggaaaaaactcattgcagtgaaaagactagagaagttggtggaagaaggtgagagggagtttcgagcggagatgcaagcaattggaagaactcatcacaagaacttagttcggttgctgggttactctgctgaggactcgaaaaggctcctggtctatgaatatatgagcaatggctcccttgcagatcttcttttcaaggcagaattgcatccaccttgggatgaaagagtgagaattgcagttgatgtcgcaagaggtctcctctatctacatgaagagtgcaagtcccctatcattcattgcgacataaagcctcaaaacattctgatggatgaattttggaatgcaaaaatctctgattttgggcttgcaaaactgctaatgccggatcaaacaaggaccttcacagggataagagggacaagagggtatttggcaccagaatggcaaaagaacactccaatatcagtaaaggcagatatctacagttttggtatagtgcttcttgaacttgtgtgttgcaggaggaacttggacgtcagtgttagagcagaggagatagttctttctacttgggtttataagtgctttgtcagtagagagctgcacaagtttattgtgggtggcgaagaagtgaacaagaagagcttggagaatatggttaaggtgggattatggtgtatacaagatgaaccggctctgcgtccatcaatgaagtctgtagtattgatgttacaaggcattactgatatatctatccctccctgtccaaccactacttctatgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

808

Amino Acids

89.73

Weight (kDa)

6.41

Isoelectric Point (pI)

36.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004215)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23400
prunus_persica	Prupe.6G165300_v2.0.a1 Prupe.6G165500_v2.0.a1 Prupe.6G165500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118691 RchiOBHm_Chr2g0118751 RchiOBHm_Chr2g0118771
rosa_laevigata	RLG00000018420
rosa_multiflora	Rmu_co8322425.1_g000001 Rmu_sc0001814.1_g000023 Rmu_sc0001814.1_g000024 Rmu_sc0001814.1_g000031 Rmu_sc0002831.1_g000032 Rmu_sc0003564.1_g000001 Rmu_sc0004345.1_g000011
rosa_roxburghii	Rroxscaffold_2G00124740 Rroxscaffold_2G00124750 Rroxscaffold_2G00124840 Rroxscaffold_2G00124870 Rroxscaffold_2G00124880 Rroxscaffold_2G00125530
rosa_rugosa	Rorug02G0218500
rosa_samantha	Rh2AG274800 Rh2AG275100 Rh2AG275400 Rh2BG286900 Rh2BG287300 Rh2DG282600 Rh2DG301600 Rh2DG301800
rosa_wichuraiana	Rw2G021860 Rw2G021880 Rw2G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2220
AatII	GACGTC	1 cut(s)	2178
AccB1I	GGYRCC	1 cut(s)	2074
AccBSI	CCGCTC	2 cut(s)	138, 1703
AccI	GTMKAC	1 cut(s)	2320
AciI	CCGC	5 cut(s)	136, 699, 753, 1059, 1703
AclWI	GGATC	7 cut(s)	115, 257, 839, 852, 893, 991, 2034
AcoI	YGGCCR	2 cut(s)	340, 955
AcsI	RAATTY	5 cut(s)	167, 207, 1383, 1458, 1973
AcuI	CTGAAG	1 cut(s)	96
AcyI	GRCGYC	1 cut(s)	2175
AfaI	GTAC	4 cut(s)	691, 887, 1475, 1547
AfiI	CCNNNNNNNGG	4 cut(s)	141, 512, 854, 2046
AgsI	TTSAA	8 cut(s)	167, 466, 1133, 1285, 1456, 1579, 1834, 2147
AjnI	CCWGG	5 cut(s)	102, 486, 979, 1109, 1785
AjuI	GAANNNNNNNTTGG	3 cut(s)	1262, 1294, 2401
AloI	GAACNNNNNNTCC	4 cut(s)	408, 440, 579, 611
Alw21I	GWGCWC	1 cut(s)	73
Alw26I	GTCTC	3 cut(s)	529, 1409, 1901
AlwI	GGATC	7 cut(s)	115, 257, 839, 852, 893, 991, 2034
AlwNI	CAGNNNCTG	1 cut(s)	502
AoxI	GGCC	6 cut(s)	143, 157, 340, 925, 955, 1107
ApeKI	GCWGC	6 cut(s)	274, 298, 301, 1052, 1193, 2242
ApoI	RAATTY	5 cut(s)	167, 207, 1383, 1458, 1973
Asp700I	GAANNNNTTC	1 cut(s)	1033
AspLEI	GCGC	1 cut(s)	1429
AspS9I	GGNCC	1 cut(s)	2037
AsuHPI	GGTGA	4 cut(s)	122, 273, 1084, 1697
AvaII	GGWCC	1 cut(s)	2037
BalI	TGGCCA	2 cut(s)	342, 957
BamHI	GGATCC	1 cut(s)	844
BanI	GGYRCC	1 cut(s)	2074
BanII	GRGCYC	3 cut(s)	73, 1601, 1627
Bbv12I	GWGCWC	1 cut(s)	73
BbvCI	CCTCAGC	1 cut(s)	1767
BbvI	GCAGC	6 cut(s)	261, 288, 310, 1064, 1205, 2229
BccI	CCATC	8 cut(s)	221, 311, 687, 689, 835, 947, 1960, 2353
BciT130I	CCWGG	5 cut(s)	104, 488, 981, 1111, 1787
BcoDI	GTCTC	3 cut(s)	529, 1409, 1901
BfaI	CTAG	4 cut(s)	90, 773, 1172, 1664
BfmI	CTRYAG	5 cut(s)	302, 645, 1259, 2122, 2358
BglII	AGATCT	2 cut(s)	1255, 1822
BisI	GCNGC	6 cut(s)	275, 299, 302, 1053, 1194, 2243
BlsI	GCNGC	6 cut(s)	276, 300, 303, 1054, 1195, 2244
Bme1390I	CCNGG	5 cut(s)	104, 488, 981, 1111, 1787
Bme18I	GGWCC	1 cut(s)	2037
BmgT120I	GGNCC	1 cut(s)	2037
BmiI	GGNNCC	5 cut(s)	846, 1600, 1784, 1813, 2076
BmrFI	CCNGG	5 cut(s)	104, 488, 981, 1111, 1787
BmsI	GCATC	4 cut(s)	529, 622, 1698, 1855
BplI	GAGNNNNNCTC	2 cut(s)	1884, 1916
BpmI	CTGGAG	1 cut(s)	511
Bpu10I	CCTNAGC	1 cut(s)	1767
BpuEI	CTTGAG	1 cut(s)	1045
BsaHI	GRCGYC	1 cut(s)	2175
BsaI	GGTCTC	2 cut(s)	1409, 1901
BsaJI	CCNNGG	7 cut(s)	103, 343, 487, 1095, 1110, 1398, 1853
Bsc4I	CCNNNNNNNGG	4 cut(s)	141, 512, 854, 2046
Bse118I	RCCGGY	3 cut(s)	505, 1042, 2332
Bse1I	ACTGG	1 cut(s)	528
Bse3DI	GCAATG	4 cut(s)	27, 1647, 1813, 1936
BseBI	CCWGG	5 cut(s)	104, 488, 981, 1111, 1787
BseDI	CCNNGG	7 cut(s)	103, 343, 487, 1095, 1110, 1398, 1853
BseGI	GGATG	5 cut(s)	469, 1407, 1846, 1864, 1975
BseLI	CCNNNNNNNGG	4 cut(s)	141, 512, 854, 2046
BseMI	GCAATG	4 cut(s)	27, 1647, 1813, 1936
BseMII	CTCAG	3 cut(s)	1252, 1460, 1758
BseNI	ACTGG	1 cut(s)	528
BseRI	GAGGAG	2 cut(s)	1889, 2207
BseXI	GCAGC	6 cut(s)	261, 288, 310, 1064, 1205, 2229
BseYI	CCCAGC	3 cut(s)	509, 604, 1753
BsgI	GTGCAG	3 cut(s)	317, 1071, 2228
BshFI	GGCC	6 cut(s)	145, 159, 342, 927, 957, 1109
BshNI	GGYRCC	1 cut(s)	2074
BsiHKAI	GWGCWC	1 cut(s)	73
BsiSI	CCGG	4 cut(s)	506, 1043, 2024, 2333
BslFI	GGGAC	2 cut(s)	1909, 2071
BslI	CCNNNNNNNGG	4 cut(s)	141, 512, 854, 2046
BsmAI	GTCTC	3 cut(s)	529, 1409, 1901
BsmFI	GGGAC	2 cut(s)	1909, 2071
BsmI	GAATGC	2 cut(s)	1160, 1987
BsnI	GGCC	6 cut(s)	145, 159, 342, 927, 957, 1109
Bso31I	GGTCTC	2 cut(s)	1409, 1901
Bsp1286I	GDGCHC	3 cut(s)	73, 1601, 1627
Bsp143I	GATC	9 cut(s)	107, 262, 450, 844, 898, 983, 1255, 1822, 2026
Bsp19I	CCATGG	1 cut(s)	1095
BspACI	CCGC	5 cut(s)	136, 699, 753, 1059, 1703
BspANI	GGCC	6 cut(s)	145, 159, 342, 927, 957, 1109
BspCNI	CTCAG	3 cut(s)	1251, 1461, 1759
BspLI	GGNNCC	5 cut(s)	846, 1600, 1784, 1813, 2076
BspMAI	CTGCAG	2 cut(s)	306, 1263
BspPI	GGATC	7 cut(s)	115, 257, 839, 852, 893, 991, 2034
BspQI	GCTCTTC	1 cut(s)	2276
BspT107I	GGYRCC	1 cut(s)	2074
BspTNI	GGTCTC	2 cut(s)	1409, 1901
BsrBI	CCGCTC	2 cut(s)	138, 1703
BsrDI	GCAATG	4 cut(s)	27, 1647, 1813, 1936
BsrFI	RCCGGY	3 cut(s)	505, 1042, 2332
BsrI	ACTGG	1 cut(s)	528
BssAI	RCCGGY	3 cut(s)	505, 1042, 2332
BssECI	CCNNGG	7 cut(s)	103, 343, 487, 1095, 1110, 1398, 1853
BssMI	GATC	9 cut(s)	107, 262, 450, 844, 898, 983, 1255, 1822, 2026
BssNAI	GTATAC	1 cut(s)	2321
BssNI	GRCGYC	1 cut(s)	2175
BssT1I	CCWWGG	4 cut(s)	343, 1095, 1398, 1853
Bst1107I	GTATAC	1 cut(s)	2321
Bst2UI	CCWGG	5 cut(s)	104, 488, 981, 1111, 1787
Bst4CI	ACNGT	9 cut(s)	241, 257, 295, 383, 785, 802, 968, 1351, 2126
Bst6I	CTCTTC	5 cut(s)	47, 1246, 1418, 1908, 2276
BstACI	GRCGYC	1 cut(s)	2175
BstC8I	GCNNGC	8 cut(s)	323, 507, 579, 1057, 1431, 1512, 1713, 2007
BstDEI	CTNAG	4 cut(s)	1238, 1469, 1741, 1767
BstDSI	CCRYGG	1 cut(s)	1095
BstENI	CCTNNNNNAGG	1 cut(s)	852
BstF5I	GGATG	5 cut(s)	469, 1407, 1846, 1864, 1975
BstHHI	GCGC	1 cut(s)	1429
BstKTI	GATC	9 cut(s)	110, 265, 453, 847, 901, 986, 1258, 1825, 2029
BstMAI	GTCTC	3 cut(s)	529, 1409, 1901
BstMBI	GATC	9 cut(s)	107, 262, 450, 844, 898, 983, 1255, 1822, 2026
BstMWI	GCNNNNNNNGC	4 cut(s)	641, 924, 933, 1052
BstNI	CCWGG	5 cut(s)	104, 488, 981, 1111, 1787
BstNSI	RCATGY	2 cut(s)	577, 1050
BstSCI	CCNGG	5 cut(s)	102, 486, 979, 1109, 1785
BstSFI	CTRYAG	5 cut(s)	302, 645, 1259, 2122, 2358
BstV1I	GCAGC	6 cut(s)	261, 288, 310, 1064, 1205, 2229
BstX2I	RGATCY	4 cut(s)	107, 844, 1255, 1822
BstYI	RGATCY	4 cut(s)	107, 844, 1255, 1822
BstZ17I	GTATAC	1 cut(s)	2321
BsuRI	GGCC	6 cut(s)	145, 159, 342, 927, 957, 1109
BtgI	CCRYGG	1 cut(s)	1095
BtgZI	GCGATG	2 cut(s)	349, 921
BtsCI	GGATG	5 cut(s)	469, 1407, 1846, 1864, 1975
BtsI	GCAGTG	2 cut(s)	269, 1659
BtsIMutI	CAGTG	6 cut(s)	269, 300, 312, 790, 1659, 2185
Cac8I	GCNNGC	8 cut(s)	323, 507, 579, 1057, 1431, 1512, 1713, 2007
CaiI	CAGNNNCTG	1 cut(s)	502
CfoI	GCGC	1 cut(s)	1429
Cfr10I	RCCGGY	3 cut(s)	505, 1042, 2332
Cfr13I	GGNCC	1 cut(s)	2037
CseI	GACGC	2 cut(s)	676, 2330
Csp6I	GTAC	4 cut(s)	690, 886, 1474, 1546
CspCI	CAANNNNNGTGG	2 cut(s)	1333, 1368
CviAII	CATG	7 cut(s)	141, 403, 574, 1047, 1096, 1419, 1910
CviQI	GTAC	4 cut(s)	690, 886, 1474, 1546
DdeI	CTNAG	4 cut(s)	1238, 1469, 1741, 1767
DpnI	GATC	9 cut(s)	109, 264, 452, 846, 900, 985, 1257, 1824, 2028
DpnII	GATC	9 cut(s)	107, 262, 450, 844, 898, 983, 1255, 1822, 2026
EaeI	YGGCCR	2 cut(s)	340, 955
Eam1104I	CTCTTC	5 cut(s)	47, 1246, 1418, 1908, 2276
EarI	CTCTTC	5 cut(s)	47, 1246, 1418, 1908, 2276
Ecl136II	GAGCTC	1 cut(s)	71
Eco130I	CCWWGG	4 cut(s)	343, 1095, 1398, 1853
Eco24I	GRGCYC	3 cut(s)	73, 1601, 1627
Eco31I	GGTCTC	2 cut(s)	1409, 1901
Eco32I	GATATC	1 cut(s)	2119
Eco47I	GGWCC	1 cut(s)	2037
Eco53kI	GAGCTC	1 cut(s)	71
Eco57I	CTGAAG	1 cut(s)	96
EcoICRI	GAGCTC	1 cut(s)	71
EcoNI	CCTNNNNNAGG	1 cut(s)	852
EcoO109I	RGGNCCY	1 cut(s)	2037
EcoRI	GAATTC	1 cut(s)	167
EcoRII	CCWGG	5 cut(s)	102, 486, 979, 1109, 1785
EcoRV	GATATC	1 cut(s)	2119
EcoT14I	CCWWGG	4 cut(s)	343, 1095, 1398, 1853
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	3 cut(s)	73, 1601, 1627
ErhI	CCWWGG	4 cut(s)	343, 1095, 1398, 1853
FaeI	CATG	7 cut(s)	144, 406, 577, 1050, 1099, 1422, 1913
FalI	AAGNNNNNCTT	4 cut(s)	1586, 1618, 2270, 2302
FaqI	GGGAC	2 cut(s)	1909, 2071
FatI	CATG	7 cut(s)	140, 402, 573, 1046, 1095, 1418, 1909
FauI	CCCGC	2 cut(s)	143, 1052
FblI	GTMKAC	1 cut(s)	2320
Fnu4HI	GCNGC	6 cut(s)	275, 299, 302, 1053, 1194, 2243
FokI	GGATG	5 cut(s)	456, 1394, 1833, 1871, 1982
FriOI	GRGCYC	3 cut(s)	73, 1601, 1627
Fsp4HI	GCNGC	6 cut(s)	275, 299, 302, 1053, 1194, 2243
FspBI	CTAG	4 cut(s)	90, 773, 1172, 1664
GlaI	GCGC	1 cut(s)	1428
GluI	GCNGC	6 cut(s)	275, 299, 302, 1053, 1194, 2243
GsaI	CCCAGC	3 cut(s)	513, 608, 1757
GsuI	CTGGAG	1 cut(s)	511
HaeIII	GGCC	6 cut(s)	145, 159, 342, 927, 957, 1109
HapII	CCGG	4 cut(s)	506, 1043, 2024, 2333
HgaI	GACGC	2 cut(s)	676, 2330
HhaI	GCGC	1 cut(s)	1429
Hin1I	GRCGYC	1 cut(s)	2175
Hin1II	CATG	7 cut(s)	144, 406, 577, 1050, 1099, 1422, 1913
Hin6I	GCGC	1 cut(s)	1427
HinP1I	GCGC	1 cut(s)	1427
HindIII	AAGCTT	1 cut(s)	323
HinfI	GANTC	5 cut(s)	86, 410, 499, 1501, 1772
HpaII	CCGG	4 cut(s)	506, 1043, 2024, 2333
HphI	GGTGA	4 cut(s)	122, 273, 1084, 1697
Hpy166II	GTNNAC	5 cut(s)	736, 811, 1615, 2275, 2321
Hpy188III	TCNNGA	8 cut(s)	122, 414, 848, 1124, 1172, 1307, 1440, 2144
Hpy8I	GTNNAC	5 cut(s)	736, 811, 1615, 2275, 2321
Hpy99I	CGWCG	1 cut(s)	437
HpyAV	CCTTC	8 cut(s)	47, 59, 156, 986, 1588, 1612, 1676, 2050
HpyCH4III	ACNGT	9 cut(s)	241, 257, 295, 383, 785, 802, 968, 1351, 2126
HpyCH4IV	ACGT	1 cut(s)	2175
HpyF10VI	GCNNNNNNNGC	4 cut(s)	641, 924, 933, 1052
HpyF3I	CTNAG	4 cut(s)	1238, 1469, 1741, 1767
HpySE526I	ACGT	1 cut(s)	2175
Hsp92I	GRCGYC	1 cut(s)	2175
Hsp92II	CATG	7 cut(s)	144, 406, 577, 1050, 1099, 1422, 1913
HspAI	GCGC	1 cut(s)	1427
KroI	GCCGGC	1 cut(s)	505
KroNI	GCCGGC	1 cut(s)	507
Kzo9I	GATC	9 cut(s)	107, 262, 450, 844, 898, 983, 1255, 1822, 2026
LguI	GCTCTTC	1 cut(s)	2276
LmnI	GCTCC	6 cut(s)	68, 1190, 1604, 1607, 1788, 1817
Lsp1109I	GCAGC	6 cut(s)	261, 288, 310, 1064, 1205, 2229
LweI	GCATC	4 cut(s)	529, 622, 1698, 1855
MaeI	CTAG	4 cut(s)	90, 773, 1172, 1664
MaeII	ACGT	1 cut(s)	2175
MaeIII	GTNAC	3 cut(s)	1090, 1757, 2370
MalI	GATC	9 cut(s)	109, 264, 452, 846, 900, 985, 1257, 1824, 2028
MbiI	CCGCTC	2 cut(s)	138, 1703
MboI	GATC	9 cut(s)	107, 262, 450, 844, 898, 983, 1255, 1822, 2026
MfeI	CAATTG	2 cut(s)	1183, 1716
MflI	RGATCY	4 cut(s)	107, 844, 1255, 1822
MhlI	GDGCHC	3 cut(s)	73, 1601, 1627
MlsI	TGGCCA	2 cut(s)	342, 957
MluNI	TGGCCA	2 cut(s)	342, 957
MlyI	GAGTC	2 cut(s)	493, 1766
MmeI	TCCRAC	2 cut(s)	184, 1293
Mox20I	TGGCCA	2 cut(s)	342, 957
Mph1103I	ATGCAT	1 cut(s)	6
MroNI	GCCGGC	1 cut(s)	505
MroXI	GAANNNNTTC	1 cut(s)	1033
MscI	TGGCCA	2 cut(s)	342, 957
MseI	TTAA	9 cut(s)	672, 684, 780, 912, 930, 1298, 1394, 1494, 2301
MslI	CAYNNNNRTG	3 cut(s)	1652, 1964, 2080
Msp20I	TGGCCA	2 cut(s)	342, 957
MspA1I	CMGCKG	2 cut(s)	301, 1055
MspI	CCGG	4 cut(s)	506, 1043, 2024, 2333
MspR9I	CCNGG	5 cut(s)	104, 488, 981, 1111, 1787
MunI	CAATTG	2 cut(s)	1183, 1716
Mva1269I	GAATGC	2 cut(s)	1160, 1987
MvaI	CCWGG	5 cut(s)	104, 488, 981, 1111, 1787
MwoI	GCNNNNNNNGC	4 cut(s)	641, 924, 933, 1052
NaeI	GCCGGC	1 cut(s)	507
NcoI	CCATGG	1 cut(s)	1095
NdeII	GATC	9 cut(s)	107, 262, 450, 844, 898, 983, 1255, 1822, 2026
NgoMIV	GCCGGC	1 cut(s)	505
NlaIII	CATG	7 cut(s)	144, 406, 577, 1050, 1099, 1422, 1913
NlaIV	GGNNCC	5 cut(s)	846, 1600, 1784, 1813, 2076
NmuCI	GTSAC	1 cut(s)	1090
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	577, 1050
PciSI	GCTCTTC	1 cut(s)	2276
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PctI	GAATGC	2 cut(s)	1160, 1987
PdiI	GCCGGC	1 cut(s)	507
PdmI	GAANNNNTTC	1 cut(s)	1033
PfeI	GAWTC	3 cut(s)	86, 410, 1501
PflFI	GACNNNGTC	1 cut(s)	1088
PfoI	TCCNGGA	1 cut(s)	979
PkrI	GCNGC	6 cut(s)	276, 300, 303, 1054, 1195, 2244
PleI	GAGTC	2 cut(s)	493, 1766
PpsI	GAGTC	2 cut(s)	493, 1766
PpuMI	RGGWCCY	1 cut(s)	2037
PsiI	TTATAA	1 cut(s)	2220
Psp124BI	GAGCTC	1 cut(s)	73
Psp5II	RGGWCCY	1 cut(s)	2037
Psp6I	CCWGG	5 cut(s)	102, 486, 979, 1109, 1785
PspFI	CCCAGC	3 cut(s)	509, 604, 1753
PspGI	CCWGG	5 cut(s)	102, 486, 979, 1109, 1785
PspN4I	GGNNCC	5 cut(s)	846, 1600, 1784, 1813, 2076
PspPI	GGNCC	1 cut(s)	2037
PspPPI	RGGWCCY	1 cut(s)	2037
PstI	CTGCAG	2 cut(s)	306, 1263
PstNI	CAGNNNCTG	1 cut(s)	502
PsuI	RGATCY	4 cut(s)	107, 844, 1255, 1822
PsyI	GACNNNGTC	1 cut(s)	1088
PvuII	CAGCTG	2 cut(s)	301, 1055
RsaI	GTAC	4 cut(s)	691, 887, 1475, 1547
RsaNI	GTAC	4 cut(s)	690, 886, 1474, 1546
RseI	CAYNNNNRTG	3 cut(s)	1652, 1964, 2080
SacI	GAGCTC	1 cut(s)	73
SapI	GCTCTTC	1 cut(s)	2276
SaqAI	TTAA	9 cut(s)	672, 684, 780, 912, 930, 1298, 1394, 1494, 2301
SatI	GCNGC	6 cut(s)	275, 299, 302, 1053, 1194, 2243
Sau3AI	GATC	9 cut(s)	107, 262, 450, 844, 898, 983, 1255, 1822, 2026
Sau96I	GGNCC	1 cut(s)	2037
SchI	GAGTC	2 cut(s)	493, 1766
ScrFI	CCNGG	5 cut(s)	104, 488, 981, 1111, 1787
SduI	GDGCHC	3 cut(s)	73, 1601, 1627
SfaNI	GCATC	4 cut(s)	529, 622, 1698, 1855
SfcI	CTRYAG	5 cut(s)	302, 645, 1259, 2122, 2358
SinI	GGWCC	1 cut(s)	2037
SmiMI	CAYNNNNRTG	3 cut(s)	1652, 1964, 2080
SmlI	CTYRAG	1 cut(s)	1024
SmoI	CTYRAG	1 cut(s)	1024
SsiI	CCGC	5 cut(s)	136, 699, 753, 1059, 1703
SspMI	CTAG	4 cut(s)	90, 773, 1172, 1664
SstI	GAGCTC	1 cut(s)	73
StyD4I	CCNGG	5 cut(s)	102, 486, 979, 1109, 1785
StyI	CCWWGG	4 cut(s)	343, 1095, 1398, 1853
TaaI	ACNGT	9 cut(s)	241, 257, 295, 383, 785, 802, 968, 1351, 2126
TaiI	ACGT	1 cut(s)	2178
TaqI	TCGA	4 cut(s)	1203, 1462, 1699, 1775
TatI	WGTACW	1 cut(s)	689
TfiI	GAWTC	3 cut(s)	86, 410, 1501
Tru1I	TTAA	9 cut(s)	672, 684, 780, 912, 930, 1298, 1394, 1494, 2301
Tru9I	TTAA	9 cut(s)	672, 684, 780, 912, 930, 1298, 1394, 1494, 2301
TscAI	CASTG	6 cut(s)	276, 300, 319, 790, 1659, 2185
TseFI	GTSAC	1 cut(s)	1090
TseI	GCWGC	6 cut(s)	274, 298, 301, 1052, 1193, 2242
Tsp45I	GTSAC	1 cut(s)	1090
TspDTI	ATGAA	9 cut(s)	554, 1235, 1809, 1875, 1925, 1926, 1986, 2343, 2366
TspGWI	ACGGA	2 cut(s)	600, 828
TspRI	CASTG	6 cut(s)	276, 300, 319, 790, 1659, 2185
Tth111I	GACNNNGTC	1 cut(s)	1088
VpaK11BI	GGWCC	1 cut(s)	2037
XagI	CCTNNNNNAGG	1 cut(s)	852
XapI	RAATTY	5 cut(s)	167, 207, 1383, 1458, 1973
XbaI	TCTAGA	1 cut(s)	1171
XceI	RCATGY	2 cut(s)	577, 1050
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1102, 1242
XmiI	GTMKAC	1 cut(s)	2320
XmnI	GAANNNNTTC	1 cut(s)	1033
XspI	CTAG	4 cut(s)	90, 773, 1172, 1664
ZraI	GACGTC	1 cut(s)	2176
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.