Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0004215

Physical Location & Seq

Genomic Coordinates Forward (+)

32880005 .. 32884784

Gene Structure 4780 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG275100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGCATAGGATTATGGCTTCCATGGCTTCCGTTGGCATTGCTATCCTTCTCTTCTCACTATATTCTCTATGTGAAGGAGCTCAACAAAACAACGATTCTAGCCACATAGGCCTGGGATCTTCACTCTTTCCAGAAACTCGCCCCAGCTCATGGCCTTCTGCCTCTGGCCAGTTCGAATTTGGCTTTTATCAGCAAGGAAGTGGTTTCGCGGTTGGAATTTGGTTGGTGGGAGTAGACCAAAACACAACTGTATGGACAGCAAACCGTGATGATCCCCCACTGCTGCCCTCACCAAATAATACAGTGAAGCTGCAGTTAGCCACTGATGGTAAGCTTGTTCTAACCGGTGACCAAGGTCATAAAAAAGTAGTCATCGCAAATGCAACGCACGGTTCTGTTTCCTCTGCCTCCATGCTTGATTCTGGAAACTTCGTTCTTTACGACGAAAACTATAAAGTGATCTGGGAGAGTTTCAGTCATCCTACTGATACTATCCTGGGTGGTCAGACTCTGCCGGCTGGGGGTCAATTAGTCTCCAGTTTGTCCGATGCTGACCACTCAACAGGACATTTTCATCTCAACATGCAGCTTGACGGAAACCTTGTTCTGTACCCAACAAACTCTGAAAACTCTCCGGTAGATGCCTACTATGCTTCAGGTACTAATGGGATCTTGAACCTTCACCTCTATCTTAACAGTACAGATGGCCGTCTGGCTCTAATCAACACCACCAGCTCGAAAGTTTACAGTGTCATCAATTGGGGTGGTGGTAATAATAATCTAGCCAGTAAAGATGATCTAGCCAATAACACCGTATATCGGGCAACTGTTGGCGTGAATGGCGTATTAAGCTATTGCACACTCAATGATGGCCAACCAAACTGTCTTTGCCTTCCTGGATCAGATTACACTGACCTCAACAGCAGGACTATGGGTTGCTTGAGAAACTATTCAGAACCGGCGTGTGCAGCTGGCGGGAAAGAGAATACAACCTTTTATGACACAGTCCCCATGGAAAATATGGCCTTGGCAGATACTCCTGACTTTGAAGCCACAATGACCGGGGAAGAATGCAATAGGTCTTGTCTAGAGGACTGCAATTGCGGAGCAGCTCTGTTCGACGGGACAAATTGTATGAAACAGAAGCCACCACTCAGATATGTGAAAAGAGATCTGAAGAAATCCAACACAGCTTTCTTCAAGGTAGGCAAGTTAACAAGAAGTCCTGAAAGCAAGAATAATGGAACTGAAACTAAAGAACCAATTCCGAAGACTCCCACTACGCTTGTTATCAGAAGCAAGAAAGTCATTGTGCAAATTCTTGTTTTAACCTTGGGTCTCATCCTCTTCTCATGTGTTGCGCTTGCAATATCTGGATTTTACATTTTCAAAATTCGAGTTCTGAGGTACAAAAGGCTGACAGAGGTTAATGGGAATCTGGAGCTGGCTGATGAGGAACTCACTATGAGAGTTTTTTCATACAACGAGCTGAAAAGGGCTACAAATGGTTTCAAGCAAGAATTGGGGAAGGGCTCCTTTGGAGCAGTTTACAAAGGGGCCCTAAATAGAGGGAAAAAACTCATTGCAGTGAAAAGACTAGAGAAGTTGGTGGAAGAAGATCTTCTTTTCAAGGCAGAATTGCATCCAGCTTGGGATGAAAGAGTGAGAATTGCAGTTGATGTGATGAGGAACTTGGACATCAGTGTTCGAGCAGAGGAGATAGTTCTTTCTACTTGGGTTTATAAGCGCTTTGTCAGTAGAGAGCTGCATAAGCTTATTGTGGGTGGCGAAGAAGTGAACAAGAAGAGCTTGGAGAATATGGTTAAGGTGGGATTATGGTGTATACAAGATGAACCAGCCCTGCGTCCATCAATGAAGTCTGTAGTATTGATGTTGCAAGGCATTACTGATATGTCTATCCCTCCATGTCCAACTACTGCTTCTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

649

Amino Acids

71.09

Weight (kDa)

6.45

Isoelectric Point (pI)

35.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	82 - 171	1.7e-16	D-mannose binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004215)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23400
prunus_persica	Prupe.6G165300_v2.0.a1 Prupe.6G165500_v2.0.a1 Prupe.6G165500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118691 RchiOBHm_Chr2g0118751 RchiOBHm_Chr2g0118771
rosa_laevigata	RLG00000018420
rosa_multiflora	Rmu_co8322425.1_g000001 Rmu_sc0001814.1_g000023 Rmu_sc0001814.1_g000024 Rmu_sc0001814.1_g000031 Rmu_sc0002831.1_g000032 Rmu_sc0003564.1_g000001 Rmu_sc0004345.1_g000011
rosa_roxburghii	Rroxscaffold_2G00124740 Rroxscaffold_2G00124750 Rroxscaffold_2G00124840 Rroxscaffold_2G00124870 Rroxscaffold_2G00124880 Rroxscaffold_2G00125530
rosa_rugosa	Rorug02G0218500
rosa_samantha	Rh2AG274800 Rh2AG275100 Rh2AG275400 Rh2BG286900 Rh2BG287300 Rh2DG282600 Rh2DG301600 Rh2DG301800
rosa_wichuraiana	Rw2G021860 Rw2G021880 Rw2G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1743
AccB7I	CCANNNNNTGG	1 cut(s)	150
AccI	GTMKAC	2 cut(s)	234, 1843
AccII	CGCG	1 cut(s)	209
AciI	CCGC	3 cut(s)	209, 975, 1104
AclWI	GGATC	4 cut(s)	124, 266, 677, 907
AcoI	YGGCCR	3 cut(s)	166, 706, 871
AcsI	RAATTY	4 cut(s)	176, 216, 1317, 1392
AcuI	CTGAAG	2 cut(s)	639, 1196
AfaI	GTAC	4 cut(s)	611, 661, 700, 1409
AfeI	AGCGCT	1 cut(s)	1748
AfiI	CCNNNNNNNGG	3 cut(s)	150, 521, 819
AgeI	ACCGGT	1 cut(s)	344
AgsI	TTSAA	6 cut(s)	676, 1049, 1201, 1390, 1513, 1630
AjnI	CCWGG	3 cut(s)	111, 495, 895
AjuI	GAANNNNNNNTTGG	3 cut(s)	1178, 1210, 1924
AloI	GAACNNNNNNTCC	4 cut(s)	417, 449, 588, 620
Alw21I	GWGCWC	1 cut(s)	82
Alw26I	GTCTC	2 cut(s)	538, 1343
AlwI	GGATC	4 cut(s)	124, 266, 677, 907
AlwNI	CAGNNNCTG	1 cut(s)	511
Aor51HI	AGCGCT	1 cut(s)	1748
AoxI	GGCC	7 cut(s)	109, 152, 166, 706, 871, 1023, 1557
ApaI	GGGCCC	1 cut(s)	1561
ApeKI	GCWGC	6 cut(s)	283, 310, 586, 968, 1109, 1765
ApoI	RAATTY	4 cut(s)	176, 216, 1317, 1392
AsiGI	ACCGGT	1 cut(s)	344
Asp700I	GAANNNNTTC	3 cut(s)	949, 1263, 1620
AspLEI	GCGC	2 cut(s)	1363, 1749
AspS9I	GGNCC	2 cut(s)	1557, 1558
AsuC2I	CCSGG	1 cut(s)	1063
AsuHPI	GGTGA	3 cut(s)	282, 359, 674
AsuII	TTCGAA	1 cut(s)	174
BaeGI	GKGCMC	1 cut(s)	1561
BalI	TGGCCA	2 cut(s)	168, 873
BanII	GRGCYC	3 cut(s)	82, 1535, 1561
BbsI	GAAGAC	1 cut(s)	1277
Bbv12I	GWGCWC	1 cut(s)	82
BbvI	GCAGC	6 cut(s)	270, 297, 598, 980, 1121, 1752
BccI	CCATC	4 cut(s)	320, 698, 863, 1876
BceAI	ACGGC	1 cut(s)	693
BciT130I	CCWGG	3 cut(s)	113, 497, 897
BcnI	CCSGG	1 cut(s)	1063
BcoDI	GTCTC	2 cut(s)	538, 1343
BfaI	CTAG	5 cut(s)	99, 782, 800, 1088, 1598
BfmI	CTRYAG	2 cut(s)	311, 1881
BfoI	RGCGCY	1 cut(s)	1750
BglI	GCCNNNNNGGC	1 cut(s)	108
BglII	AGATCT	2 cut(s)	1171, 1618
BisI	GCNGC	6 cut(s)	284, 311, 587, 969, 1110, 1766
BlsI	GCNGC	6 cut(s)	285, 312, 588, 970, 1111, 1767
Bme1390I	CCNGG	4 cut(s)	113, 497, 897, 1063
BmgT120I	GGNCC	2 cut(s)	1557, 1558
BmiI	GGNNCC	3 cut(s)	1534, 1558, 1559
BmrFI	CCNGG	4 cut(s)	113, 497, 897, 1063
BmsI	GCATC	3 cut(s)	538, 631, 1651
BoxI	GACNNNNGTC	1 cut(s)	354
BpiI	GAAGAC	1 cut(s)	1277
BpmI	CTGGAG	2 cut(s)	520, 1460
Bpu14I	TTCGAA	1 cut(s)	174
BpuEI	CTTGAG	1 cut(s)	961
BpuMI	CCSGG	1 cut(s)	1063
BsaI	GGTCTC	1 cut(s)	1343
BsaJI	CCNNGG	8 cut(s)	21, 112, 352, 496, 1011, 1026, 1062, 1332
BsaWI	WCCGGW	2 cut(s)	344, 634
Bsc4I	CCNNNNNNNGG	3 cut(s)	150, 521, 819
Bse118I	RCCGGY	3 cut(s)	344, 514, 958
Bse1I	ACTGG	3 cut(s)	169, 537, 786
Bse3DI	GCAATG	2 cut(s)	36, 1581
BseBI	CCWGG	3 cut(s)	113, 497, 897
BseDI	CCNNGG	8 cut(s)	21, 112, 352, 496, 1011, 1026, 1062, 1332
BseGI	GGATG	4 cut(s)	478, 1341, 1642, 1660
BseLI	CCNNNNNNNGG	3 cut(s)	150, 521, 819
BseMI	GCAATG	2 cut(s)	36, 1581
BseMII	CTCAG	2 cut(s)	1168, 1394
BseNI	ACTGG	3 cut(s)	169, 537, 786
BseRI	GAGGAG	1 cut(s)	1730
BseSI	GKGCMC	1 cut(s)	1561
BseXI	GCAGC	6 cut(s)	270, 297, 598, 980, 1121, 1752
BseYI	CCCAGC	2 cut(s)	143, 518
BsgI	GTGCAG	1 cut(s)	987
Bsh1236I	CGCG	1 cut(s)	209
BshFI	GGCC	7 cut(s)	111, 154, 168, 708, 873, 1025, 1559
BshTI	ACCGGT	1 cut(s)	344
BsiHKAI	GWGCWC	1 cut(s)	82
BsiSI	CCGG	5 cut(s)	345, 515, 635, 959, 1062
BslFI	GGGAC	2 cut(s)	992, 1138
BslI	CCNNNNNNNGG	3 cut(s)	150, 521, 819
BsmAI	GTCTC	2 cut(s)	538, 1343
BsmFI	GGGAC	2 cut(s)	992, 1138
BsmI	GAATGC	1 cut(s)	1076
BsnI	GGCC	7 cut(s)	111, 154, 168, 708, 873, 1025, 1559
Bso31I	GGTCTC	1 cut(s)	1343
Bsp119I	TTCGAA	1 cut(s)	174
Bsp120I	GGGCCC	1 cut(s)	1557
Bsp1286I	GDGCHC	3 cut(s)	82, 1535, 1561
Bsp143I	GATC	8 cut(s)	116, 271, 459, 669, 796, 899, 1171, 1618
Bsp19I	CCATGG	2 cut(s)	21, 1011
BspACI	CCGC	3 cut(s)	209, 975, 1104
BspANI	GGCC	7 cut(s)	111, 154, 168, 708, 873, 1025, 1559
BspCNI	CTCAG	2 cut(s)	1167, 1395
BspFNI	CGCG	1 cut(s)	209
BspLI	GGNNCC	3 cut(s)	1534, 1558, 1559
BspMAI	CTGCAG	1 cut(s)	315
BspPI	GGATC	4 cut(s)	124, 266, 677, 907
BspQI	GCTCTTC	1 cut(s)	1799
BspT104I	TTCGAA	1 cut(s)	174
BspTNI	GGTCTC	1 cut(s)	1343
BsrDI	GCAATG	2 cut(s)	36, 1581
BsrFI	RCCGGY	3 cut(s)	344, 514, 958
BsrI	ACTGG	3 cut(s)	169, 537, 786
BssAI	RCCGGY	3 cut(s)	344, 514, 958
BssECI	CCNNGG	8 cut(s)	21, 112, 352, 496, 1011, 1026, 1062, 1332
BssMI	GATC	8 cut(s)	116, 271, 459, 669, 796, 899, 1171, 1618
BssNAI	GTATAC	1 cut(s)	1844
BssT1I	CCWWGG	5 cut(s)	21, 352, 1011, 1026, 1332
Bst1107I	GTATAC	1 cut(s)	1844
Bst2UI	CCWGG	3 cut(s)	113, 497, 897
Bst6I	CTCTTC	3 cut(s)	56, 1352, 1799
BstBI	TTCGAA	1 cut(s)	174
BstC8I	GCNNGC	4 cut(s)	516, 973, 1365, 1446
BstDEI	CTNAG	2 cut(s)	1154, 1403
BstDSI	CCRYGG	2 cut(s)	21, 1011
BstEII	GGTNACC	1 cut(s)	347
BstF5I	GGATG	4 cut(s)	478, 1341, 1642, 1660
BstFNI	CGCG	1 cut(s)	209
BstH2I	RGCGCY	1 cut(s)	1750
BstHHI	GCGC	2 cut(s)	1363, 1749
BstKTI	GATC	8 cut(s)	119, 274, 462, 672, 799, 902, 1174, 1621
BstMAI	GTCTC	2 cut(s)	538, 1343
BstMBI	GATC	8 cut(s)	116, 271, 459, 669, 796, 899, 1171, 1618
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 108, 650, 840, 849, 968, 1771
BstNI	CCWGG	3 cut(s)	113, 497, 897
BstNSI	RCATGY	1 cut(s)	586
BstPAI	GACNNNNGTC	1 cut(s)	354
BstPI	GGTNACC	1 cut(s)	347
BstSCI	CCNGG	4 cut(s)	111, 495, 895, 1061
BstSFI	CTRYAG	2 cut(s)	311, 1881
BstSLI	GKGCMC	1 cut(s)	1561
BstUI	CGCG	1 cut(s)	209
BstV1I	GCAGC	6 cut(s)	270, 297, 598, 980, 1121, 1752
BstV2I	GAAGAC	1 cut(s)	1277
BstX2I	RGATCY	4 cut(s)	116, 669, 1171, 1618
BstYI	RGATCY	4 cut(s)	116, 669, 1171, 1618
BstZ17I	GTATAC	1 cut(s)	1844
BsuRI	GGCC	7 cut(s)	111, 154, 168, 708, 873, 1025, 1559
BtgI	CCRYGG	2 cut(s)	21, 1011
BtgZI	GCGATG	1 cut(s)	358
BtsCI	GGATG	4 cut(s)	478, 1341, 1642, 1660
BtsI	GCAGTG	2 cut(s)	278, 1593
BtsIMutI	CAGTG	7 cut(s)	278, 309, 321, 754, 909, 1593, 1708
Cac8I	GCNNGC	4 cut(s)	516, 973, 1365, 1446
CaiI	CAGNNNCTG	1 cut(s)	511
CfoI	GCGC	2 cut(s)	1363, 1749
Cfr10I	RCCGGY	3 cut(s)	344, 514, 958
Cfr13I	GGNCC	2 cut(s)	1557, 1558
CseI	GACGC	1 cut(s)	1853
Csp6I	GTAC	4 cut(s)	610, 660, 699, 1408
CspAI	ACCGGT	1 cut(s)	344
CspCI	CAANNNNNGTGG	4 cut(s)	745, 780, 1267, 1302
CviAII	CATG	7 cut(s)	22, 150, 412, 583, 1012, 1353, 1926
CviQI	GTAC	4 cut(s)	610, 660, 699, 1408
DdeI	CTNAG	2 cut(s)	1154, 1403
DpnI	GATC	8 cut(s)	118, 273, 461, 671, 798, 901, 1173, 1620
DpnII	GATC	8 cut(s)	116, 271, 459, 669, 796, 899, 1171, 1618
EaeI	YGGCCR	3 cut(s)	166, 706, 871
Eam1104I	CTCTTC	3 cut(s)	56, 1352, 1799
EarI	CTCTTC	3 cut(s)	56, 1352, 1799
Ecl136II	GAGCTC	1 cut(s)	80
Eco130I	CCWWGG	5 cut(s)	21, 352, 1011, 1026, 1332
Eco147I	AGGCCT	1 cut(s)	111
Eco24I	GRGCYC	3 cut(s)	82, 1535, 1561
Eco31I	GGTCTC	1 cut(s)	1343
Eco47III	AGCGCT	1 cut(s)	1748
Eco53kI	GAGCTC	1 cut(s)	80
Eco57I	CTGAAG	2 cut(s)	639, 1196
Eco91I	GGTNACC	1 cut(s)	347
EcoICRI	GAGCTC	1 cut(s)	80
EcoO109I	RGGNCCY	2 cut(s)	1557, 1558
EcoO65I	GGTNACC	1 cut(s)	347
EcoRII	CCWGG	3 cut(s)	111, 495, 895
EcoT14I	CCWWGG	5 cut(s)	21, 352, 1011, 1026, 1332
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	3 cut(s)	82, 1535, 1561
ErhI	CCWWGG	5 cut(s)	21, 352, 1011, 1026, 1332
FaeI	CATG	7 cut(s)	25, 153, 415, 586, 1015, 1356, 1929
FalI	AAGNNNNNCTT	8 cut(s)	1520, 1552, 1605, 1637, 1608, 1640, 1793, 1825
FaqI	GGGAC	2 cut(s)	992, 1138
FatI	CATG	7 cut(s)	21, 149, 411, 582, 1011, 1352, 1925
FauI	CCCGC	1 cut(s)	968
FblI	GTMKAC	2 cut(s)	234, 1843
Fnu4HI	GCNGC	6 cut(s)	284, 311, 587, 969, 1110, 1766
FokI	GGATG	4 cut(s)	465, 1328, 1629, 1667
FriOI	GRGCYC	3 cut(s)	82, 1535, 1561
Fsp4HI	GCNGC	6 cut(s)	284, 311, 587, 969, 1110, 1766
FspBI	CTAG	5 cut(s)	99, 782, 800, 1088, 1598
GlaI	GCGC	2 cut(s)	1362, 1748
GluI	GCNGC	6 cut(s)	284, 311, 587, 969, 1110, 1766
GsaI	CCCAGC	2 cut(s)	147, 522
GsuI	CTGGAG	2 cut(s)	520, 1460
HaeII	RGCGCY	1 cut(s)	1750
HaeIII	GGCC	7 cut(s)	111, 154, 168, 708, 873, 1025, 1559
HapII	CCGG	5 cut(s)	345, 515, 635, 959, 1062
HgaI	GACGC	1 cut(s)	1853
HhaI	GCGC	2 cut(s)	1363, 1749
Hin1II	CATG	7 cut(s)	25, 153, 415, 586, 1015, 1356, 1929
Hin6I	GCGC	2 cut(s)	1361, 1747
HinP1I	GCGC	2 cut(s)	1361, 1747
HincII	GTYRAC	1 cut(s)	1215
HindII	GTYRAC	1 cut(s)	1215
HindIII	AAGCTT	2 cut(s)	332, 1772
HinfI	GANTC	5 cut(s)	95, 419, 508, 1273, 1435
HpaI	GTTAAC	1 cut(s)	1215
HpaII	CCGG	5 cut(s)	345, 515, 635, 959, 1062
HphI	GGTGA	3 cut(s)	282, 359, 674
Hpy166II	GTNNAC	6 cut(s)	235, 745, 1215, 1549, 1798, 1844
Hpy188III	TCNNGA	8 cut(s)	131, 423, 673, 1040, 1088, 1226, 1374, 1439
Hpy8I	GTNNAC	6 cut(s)	235, 745, 1215, 1549, 1798, 1844
Hpy99I	CGWCG	2 cut(s)	446, 1124
HpyAV	CCTTC	6 cut(s)	56, 68, 165, 689, 902, 1522
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 108, 650, 840, 849, 968, 1771
HpyF3I	CTNAG	2 cut(s)	1154, 1403
Hsp92II	CATG	7 cut(s)	25, 153, 415, 586, 1015, 1356, 1929
HspAI	GCGC	2 cut(s)	1361, 1747
KroI	GCCGGC	1 cut(s)	514
KroNI	GCCGGC	1 cut(s)	516
KspAI	GTTAAC	1 cut(s)	1215
Kzo9I	GATC	8 cut(s)	116, 271, 459, 669, 796, 899, 1171, 1618
LguI	GCTCTTC	1 cut(s)	1799
LmnI	GCTCC	5 cut(s)	77, 1106, 1441, 1538, 1541
Lsp1109I	GCAGC	6 cut(s)	270, 297, 598, 980, 1121, 1752
LweI	GCATC	3 cut(s)	538, 631, 1651
MaeI	CTAG	5 cut(s)	99, 782, 800, 1088, 1598
MaeIII	GTNAC	1 cut(s)	347
MalI	GATC	8 cut(s)	118, 273, 461, 671, 798, 901, 1173, 1620
MboI	GATC	8 cut(s)	116, 271, 459, 669, 796, 899, 1171, 1618
MfeI	CAATTG	2 cut(s)	757, 1099
MflI	RGATCY	4 cut(s)	116, 669, 1171, 1618
MhlI	GDGCHC	3 cut(s)	82, 1535, 1561
MlsI	TGGCCA	2 cut(s)	168, 873
MluNI	TGGCCA	2 cut(s)	168, 873
MlyI	GAGTC	2 cut(s)	502, 1267
MmeI	TCCRAC	2 cut(s)	193, 1209
Mox20I	TGGCCA	2 cut(s)	168, 873
Mph1103I	ATGCAT	1 cut(s)	6
MroNI	GCCGGC	1 cut(s)	514
MroXI	GAANNNNTTC	3 cut(s)	949, 1263, 1620
MscI	TGGCCA	2 cut(s)	168, 873
MseI	TTAA	6 cut(s)	693, 848, 1214, 1328, 1428, 1824
MslI	CAYNNNNRTG	1 cut(s)	1586
Msp20I	TGGCCA	2 cut(s)	168, 873
MspA1I	CMGCKG	1 cut(s)	971
MspI	CCGG	5 cut(s)	345, 515, 635, 959, 1062
MspR9I	CCNGG	4 cut(s)	113, 497, 897, 1063
MunI	CAATTG	2 cut(s)	757, 1099
Mva1269I	GAATGC	1 cut(s)	1076
MvaI	CCWGG	3 cut(s)	113, 497, 897
MvnI	CGCG	1 cut(s)	209
MwoI	GCNNNNNNNGC	7 cut(s)	23, 108, 650, 840, 849, 968, 1771
NaeI	GCCGGC	1 cut(s)	516
NciI	CCSGG	1 cut(s)	1063
NcoI	CCATGG	2 cut(s)	21, 1011
NdeII	GATC	8 cut(s)	116, 271, 459, 669, 796, 899, 1171, 1618
NgoMIV	GCCGGC	1 cut(s)	514
NlaIII	CATG	7 cut(s)	25, 153, 415, 586, 1015, 1356, 1929
NlaIV	GGNNCC	3 cut(s)	1534, 1558, 1559
NmuCI	GTSAC	1 cut(s)	347
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	586
NspV	TTCGAA	1 cut(s)	174
PceI	AGGCCT	1 cut(s)	111
PciSI	GCTCTTC	1 cut(s)	1799
PcsI	WCGNNNNNNNCGW	1 cut(s)	438
PctI	GAATGC	1 cut(s)	1076
PdiI	GCCGGC	1 cut(s)	516
PdmI	GAANNNNTTC	3 cut(s)	949, 1263, 1620
PfeI	GAWTC	3 cut(s)	95, 419, 1435
PflFI	GACNNNGTC	1 cut(s)	1004
PflMI	CCANNNNNTGG	1 cut(s)	150
PfoI	TCCNGGA	1 cut(s)	895
PinAI	ACCGGT	1 cut(s)	344
PkrI	GCNGC	6 cut(s)	285, 312, 588, 970, 1111, 1767
PleI	GAGTC	2 cut(s)	502, 1267
PpsI	GAGTC	2 cut(s)	502, 1267
PshAI	GACNNNNGTC	1 cut(s)	354
PsiI	TTATAA	1 cut(s)	1743
Psp124BI	GAGCTC	1 cut(s)	82
Psp6I	CCWGG	3 cut(s)	111, 495, 895
PspEI	GGTNACC	1 cut(s)	347
PspFI	CCCAGC	2 cut(s)	143, 518
PspGI	CCWGG	3 cut(s)	111, 495, 895
PspN4I	GGNNCC	3 cut(s)	1534, 1558, 1559
PspOMI	GGGCCC	1 cut(s)	1557
PspPI	GGNCC	2 cut(s)	1557, 1558
PstI	CTGCAG	1 cut(s)	315
PstNI	CAGNNNCTG	1 cut(s)	511
PsuI	RGATCY	4 cut(s)	116, 669, 1171, 1618
PsyI	GACNNNGTC	1 cut(s)	1004
PvuII	CAGCTG	1 cut(s)	971
RsaI	GTAC	4 cut(s)	611, 661, 700, 1409
RsaNI	GTAC	4 cut(s)	610, 660, 699, 1408
RseI	CAYNNNNRTG	1 cut(s)	1586
SacI	GAGCTC	1 cut(s)	82
SapI	GCTCTTC	1 cut(s)	1799
SaqAI	TTAA	6 cut(s)	693, 848, 1214, 1328, 1428, 1824
SatI	GCNGC	6 cut(s)	284, 311, 587, 969, 1110, 1766
Sau3AI	GATC	8 cut(s)	116, 271, 459, 669, 796, 899, 1171, 1618
Sau96I	GGNCC	2 cut(s)	1557, 1558
SchI	GAGTC	2 cut(s)	502, 1267
ScrFI	CCNGG	4 cut(s)	113, 497, 897, 1063
SduI	GDGCHC	3 cut(s)	82, 1535, 1561
SfaNI	GCATC	3 cut(s)	538, 631, 1651
SfcI	CTRYAG	2 cut(s)	311, 1881
SfuI	TTCGAA	1 cut(s)	174
SmiMI	CAYNNNNRTG	1 cut(s)	1586
SmlI	CTYRAG	1 cut(s)	940
SmoI	CTYRAG	1 cut(s)	940
SseBI	AGGCCT	1 cut(s)	111
SsiI	CCGC	3 cut(s)	209, 975, 1104
SspMI	CTAG	5 cut(s)	99, 782, 800, 1088, 1598
SstI	GAGCTC	1 cut(s)	82
StuI	AGGCCT	1 cut(s)	111
StyD4I	CCNGG	4 cut(s)	111, 495, 895, 1061
StyI	CCWWGG	5 cut(s)	21, 352, 1011, 1026, 1332
TaqI	TCGA	5 cut(s)	174, 737, 1119, 1396, 1708
TatI	WGTACW	1 cut(s)	698
TfiI	GAWTC	3 cut(s)	95, 419, 1435
Tru1I	TTAA	6 cut(s)	693, 848, 1214, 1328, 1428, 1824
Tru9I	TTAA	6 cut(s)	693, 848, 1214, 1328, 1428, 1824
TscAI	CASTG	7 cut(s)	285, 309, 328, 754, 916, 1593, 1708
TseFI	GTSAC	1 cut(s)	347
TseI	GCWGC	6 cut(s)	283, 310, 586, 968, 1109, 1765
Tsp45I	GTSAC	1 cut(s)	347
TspDTI	ATGAA	6 cut(s)	563, 1151, 1467, 1671, 1866, 1889
TspGWI	ACGGA	2 cut(s)	19, 609
TspRI	CASTG	7 cut(s)	285, 309, 328, 754, 916, 1593, 1708
Tth111I	GACNNNGTC	1 cut(s)	1004
Van91I	CCANNNNNTGG	1 cut(s)	150
XapI	RAATTY	4 cut(s)	176, 216, 1317, 1392
XbaI	TCTAGA	1 cut(s)	1087
XceI	RCATGY	1 cut(s)	586
XcmI	CCANNNNNNNNNTGG	2 cut(s)	176, 1018
XmiI	GTMKAC	2 cut(s)	234, 1843
XmnI	GAANNNNTTC	3 cut(s)	949, 1263, 1620
XspI	CTAG	5 cut(s)	99, 782, 800, 1088, 1598
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.