Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0004215

Physical Location & Seq

Genomic Coordinates Forward (+)

30467761 .. 30470208

Gene Structure 2448 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G021860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGCATAGGATTATGGCTTCCATTGGCATTGCTATCCTTCTCTTCTCACCACATTCTCTCTGTGAAGGAGCTCAACAAAACAACGATTCTAGGCACATACGCCTGGGATCTTCAGTCTTTTCAGAAACTCACCCCAGCTCATGGCCTTCTGCCTCAGGCCTGTTTGAATTCGGCTTTTATCAGCAAGGAAATGGTTTTGCAGTTGGAATTTGGTTGGTGGGAGTAGATGGAAACACAACTGTATGGACAGCAAACCGTGATGATCCCCCACTGCTGCCCTCACCAAATAATGCAGTGCAGCTGCAGTTAGCCACTGATGGCAAGCTTGTTCTAAGGAGTGACCAAGGTCATAAAAAAGTAGTCATCGCAAGTGCAACAAACGGTTCTGTTTCCTCTGCCTCCATGCTTGATTCTGGAAACTTCGTTCTTTACGACGAAAACTATAAAGTGATCTGGGAGAGTTTCAATCATCCTACTGATACTATCCTGGGTGGTCAGACTCTGCCGGCTGGGGGTCAATTAGTCTCCAGTTTGTCCGATGCTGACCACTCAACAGGACATTTTCATCTCAACATGCAGGCTGACGGAAACCTGGTTCTCTACCCAGCAAACTCTGAAAACTCTCCGATAGATGCCTACTATGCTACAGATACTTGGAGGAACTTGACGCTTAATCTCCATCTTAACAGTACAGATGGCGGTCTTGCTCTAATCAACACCACCAGCTCGGAAGTTTACAGGGTCATCAGTAGGGATATTGGCATCATCAGTAGGGGTAGTGGTAATGATGTTCTAGCCATTAACAGTGTATATCGGGCAACTGTTAGCGTGAACGGAGTTCTACGGGTGTATTCTCATCAGATGGATCCTGACAAAGGCAAACTCCAAGCACCTGTTATTATGTGGTACAAACCAGATGATCCTTGCGATGTTAATGGCGTGTGTGGCCTTAACAGATATTGCACACTCAATGATGGCCAACCAGACTGTCTTTGCCTTCCTGGATCAGATTACGCTGACCTCAACAGCAGGACTATGGGTTGCTTGAGAAACTATTCAGAACCGGCATGTGCAGCTGGCGGGAAAGAGAATACAACCTTTTATGACATAGTCACCATGGAAAATATGGCCTGGGTAGATACTCCTGACTTTGAAGCCACAATGACCATAGAAGAATGCAAGAGGTCTTGTCGAGAGGACTGCAATTGTGGAGCAGCTCTGTTCGAGCAGACAAAGTGTATGAAACAAAAGCCACCACTCAGATATTGGAGAAGAGATCTGCAGAAATCCAACACAGCTTTCTTCAAGGTAAGCAACTTAACAAGTCCTGAAAGCAAGAATAATGGAACTGAAACTAAAGAACCCACTATGGTTGTTATCCGAAGCAAGAAAGTCATTGTGCAAATTCTTGTTTTAACCTTGGGTCTCATCCTCTTCTCATGTGTTGCGCTTGCAATATCTGGATTTTACATTTTCAAAATTCGAGTTCTGAGGTACAAAAGGCTGACAGAGGTTAATGGGAATCTGGGGCTGGCTGATGAGGAACTCACTATGAGAGTTTTTTCGTACAACGAGCTGAAAAGGGCTACAAATGGTTTCAAGCAAGAATTGGGGAAGGGCTCCTTCGGAGCAGTTTACAAAGGGGCTCTAAATAGAGGGAAAAAACTCATTGCAGTGAAAAGACTGGAGAAGTTGGTGGAAGAAGGTGAGAGGGAGTTTCGAGCGGAGATGCAAGCAATTGGAAGAACTCACCACAAGAACTTAGTTCGATTGCTGGGTTACTCTGCTGAGGACTCGAAAAGGCTCCTGGTCTATGAATATATGAGCAATGGCTCCCTTGCAGATCTTCTTTTCAAGGCAGAATTGCATCCACCTTGGGATGAAAGAGTGAGAATTGCAGTTGATGTCGCAAGAGGTCTCCTCTATCTACATGAAGAGTGCAAGTCCCCTATCATTCATTGCGACATAAAGCCTCAAAACATTCTGATGGATGAATTTTGGAATGCAAAAATCTCTGATTTTGGGCTTGCAAAACTGCTAATGCCGGATCAAACAAGGACCTTCACAGGGATAAGAGGGACAAGAGGGTATTTGGCACCAGAATGGCAAAAGAACACTCCAATATCAGTAAAGGCAGATATCTACAGCTTTGGTATAGTGCTTCTTGAACTTGTGTGTTGCAGGAGGAACTTGGACGTCAGTGTTAGAGCAGAGGAGATGGTTCTTTCTACTTGGGTTTATAAGTGCTTTGTCAGTAGAGAGCTGCACAAGTTTATTGTGGGTGGCGAAGAAGTGAACAAGAAGAGCTTGGAGAATATGGTTAAGGTGGGATTATGGTGTATACAAGATGAACCGGCTCTGCGTCCATCAATGAAGTCTGTAGTATTGATGTTACAAGGCATTACTGATATATCTATCCCTCCCTGTCCAACCACTACTTCTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

815

Amino Acids

90.66

Weight (kDa)

6.64

Isoelectric Point (pI)

37.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	79 - 168	5.5e-17	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	533 - 796	9.9e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	534 - 795	1.3e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004215)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g23400
prunus_persica	Prupe.6G165300_v2.0.a1 Prupe.6G165500_v2.0.a1 Prupe.6G165500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0118691 RchiOBHm_Chr2g0118751 RchiOBHm_Chr2g0118771
rosa_laevigata	RLG00000018420
rosa_multiflora	Rmu_co8322425.1_g000001 Rmu_sc0001814.1_g000023 Rmu_sc0001814.1_g000024 Rmu_sc0001814.1_g000031 Rmu_sc0002831.1_g000032 Rmu_sc0003564.1_g000001 Rmu_sc0004345.1_g000011
rosa_roxburghii	Rroxscaffold_2G00124740 Rroxscaffold_2G00124750 Rroxscaffold_2G00124840 Rroxscaffold_2G00124870 Rroxscaffold_2G00124880 Rroxscaffold_2G00125530
rosa_rugosa	Rorug02G0218500
rosa_samantha	Rh2AG274800 Rh2AG275100 Rh2AG275400 Rh2BG286900 Rh2BG287300 Rh2DG282600 Rh2DG301600 Rh2DG301800
rosa_wichuraiana	Rw2G021860 Rw2G021880 Rw2G021920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2241
AatII	GACGTC	1 cut(s)	2199
AccB1I	GGYRCC	1 cut(s)	2095
AccB7I	CCANNNNNTGG	1 cut(s)	141
AccBSI	CCGCTC	1 cut(s)	1724
AccI	GTMKAC	1 cut(s)	2341
AciI	CCGC	3 cut(s)	699, 1080, 1724
AclWI	GGATC	7 cut(s)	115, 257, 860, 873, 914, 1012, 2055
AcoI	YGGCCR	1 cut(s)	976
AcsI	RAATTY	5 cut(s)	167, 207, 1404, 1479, 1994
AcuI	CTGAAG	1 cut(s)	96
AcyI	GRCGYC	1 cut(s)	2196
AfaI	GTAC	4 cut(s)	691, 908, 1496, 1568
AfiI	CCNNNNNNNGG	4 cut(s)	141, 512, 875, 2067
AgsI	TTSAA	8 cut(s)	167, 466, 1154, 1306, 1477, 1600, 1855, 2168
AjnI	CCWGG	6 cut(s)	102, 486, 591, 1000, 1130, 1806
AjuI	GAANNNNNNNTTGG	3 cut(s)	1283, 1315, 2422
AloI	GAACNNNNNNTCC	4 cut(s)	408, 440, 579, 611
Alw21I	GWGCWC	1 cut(s)	73
Alw26I	GTCTC	3 cut(s)	529, 1430, 1922
AlwI	GGATC	7 cut(s)	115, 257, 860, 873, 914, 1012, 2055
AlwNI	CAGNNNCTG	1 cut(s)	502
AoxI	GGCC	5 cut(s)	143, 157, 946, 976, 1128
ApeKI	GCWGC	6 cut(s)	274, 298, 301, 1073, 1214, 2263
ApoI	RAATTY	5 cut(s)	167, 207, 1404, 1479, 1994
Asp700I	GAANNNNTTC	1 cut(s)	1054
AspLEI	GCGC	1 cut(s)	1450
AspS9I	GGNCC	1 cut(s)	2058
AsuHPI	GGTGA	6 cut(s)	39, 122, 273, 1105, 1718, 1742
AvaII	GGWCC	1 cut(s)	2058
AxyI	CCTNAGG	1 cut(s)	154
BalI	TGGCCA	1 cut(s)	978
BamHI	GGATCC	1 cut(s)	865
BanI	GGYRCC	1 cut(s)	2095
BanII	GRGCYC	3 cut(s)	73, 1622, 1648
Bbv12I	GWGCWC	1 cut(s)	73
BbvCI	CCTCAGC	1 cut(s)	1788
BbvI	GCAGC	6 cut(s)	261, 288, 310, 1085, 1226, 2250
BccI	CCATC	9 cut(s)	221, 311, 687, 689, 856, 968, 1981, 2212, 2374
BcgI	CGANNNNNNTGC	2 cut(s)	1182, 1216
BciT130I	CCWGG	6 cut(s)	104, 488, 593, 1002, 1132, 1808
BcoDI	GTCTC	3 cut(s)	529, 1430, 1922
BfaI	CTAG	2 cut(s)	90, 794
BfmI	CTRYAG	5 cut(s)	302, 645, 1280, 2143, 2379
BglII	AGATCT	2 cut(s)	1276, 1843
BisI	GCNGC	6 cut(s)	275, 299, 302, 1074, 1215, 2264
BlsI	GCNGC	6 cut(s)	276, 300, 303, 1075, 1216, 2265
Bme1390I	CCNGG	6 cut(s)	104, 488, 593, 1002, 1132, 1808
Bme18I	GGWCC	1 cut(s)	2058
BmgT120I	GGNCC	1 cut(s)	2058
BmiI	GGNNCC	5 cut(s)	867, 1621, 1805, 1834, 2097
BmrFI	CCNGG	6 cut(s)	104, 488, 593, 1002, 1132, 1808
BmsI	GCATC	5 cut(s)	529, 622, 771, 1719, 1876
BoxI	GACNNNNGTC	1 cut(s)	345
BplI	GAGNNNNNCTC	2 cut(s)	1905, 1937
BpmI	CTGGAG	2 cut(s)	511, 1706
Bpu10I	CCTNAGC	1 cut(s)	1788
BpuEI	CTTGAG	1 cut(s)	1066
BsaHI	GRCGYC	1 cut(s)	2196
BsaI	GGTCTC	2 cut(s)	1430, 1922
BsaJI	CCNNGG	7 cut(s)	103, 343, 487, 1116, 1131, 1419, 1874
Bsc4I	CCNNNNNNNGG	4 cut(s)	141, 512, 875, 2067
Bse118I	RCCGGY	3 cut(s)	505, 1063, 2353
Bse1I	ACTGG	2 cut(s)	528, 1689
Bse21I	CCTNAGG	1 cut(s)	154
Bse3DI	GCAATG	4 cut(s)	27, 1668, 1834, 1957
BseBI	CCWGG	6 cut(s)	104, 488, 593, 1002, 1132, 1808
BseDI	CCNNGG	7 cut(s)	103, 343, 487, 1116, 1131, 1419, 1874
BseGI	GGATG	5 cut(s)	469, 1428, 1867, 1885, 1996
BseLI	CCNNNNNNNGG	4 cut(s)	141, 512, 875, 2067
BseMI	GCAATG	4 cut(s)	27, 1668, 1834, 1957
BseMII	CTCAG	4 cut(s)	168, 1273, 1481, 1779
BseNI	ACTGG	2 cut(s)	528, 1689
BseRI	GAGGAG	2 cut(s)	1910, 2228
BseXI	GCAGC	6 cut(s)	261, 288, 310, 1085, 1226, 2250
BseYI	CCCAGC	4 cut(s)	134, 509, 604, 1774
BsgI	GTGCAG	3 cut(s)	317, 1092, 2249
BshFI	GGCC	5 cut(s)	145, 159, 948, 978, 1130
BshNI	GGYRCC	1 cut(s)	2095
BsiHKAI	GWGCWC	1 cut(s)	73
BsiSI	CCGG	4 cut(s)	506, 1064, 2045, 2354
BslFI	GGGAC	2 cut(s)	1930, 2092
BslI	CCNNNNNNNGG	4 cut(s)	141, 512, 875, 2067
BsmAI	GTCTC	3 cut(s)	529, 1430, 1922
BsmFI	GGGAC	2 cut(s)	1930, 2092
BsmI	GAATGC	2 cut(s)	1181, 2008
BsnI	GGCC	5 cut(s)	145, 159, 948, 978, 1130
Bso31I	GGTCTC	2 cut(s)	1430, 1922
Bsp1286I	GDGCHC	3 cut(s)	73, 1622, 1648
Bsp143I	GATC	9 cut(s)	107, 262, 450, 865, 919, 1004, 1276, 1843, 2047
Bsp19I	CCATGG	1 cut(s)	1116
BspACI	CCGC	3 cut(s)	699, 1080, 1724
BspANI	GGCC	5 cut(s)	145, 159, 948, 978, 1130
BspCNI	CTCAG	4 cut(s)	167, 1272, 1482, 1780
BspLI	GGNNCC	5 cut(s)	867, 1621, 1805, 1834, 2097
BspMAI	CTGCAG	2 cut(s)	306, 1284
BspPI	GGATC	7 cut(s)	115, 257, 860, 873, 914, 1012, 2055
BspQI	GCTCTTC	1 cut(s)	2297
BspT107I	GGYRCC	1 cut(s)	2095
BspTNI	GGTCTC	2 cut(s)	1430, 1922
BsrBI	CCGCTC	1 cut(s)	1724
BsrDI	GCAATG	4 cut(s)	27, 1668, 1834, 1957
BsrFI	RCCGGY	3 cut(s)	505, 1063, 2353
BsrI	ACTGG	2 cut(s)	528, 1689
BssAI	RCCGGY	3 cut(s)	505, 1063, 2353
BssECI	CCNNGG	7 cut(s)	103, 343, 487, 1116, 1131, 1419, 1874
BssMI	GATC	9 cut(s)	107, 262, 450, 865, 919, 1004, 1276, 1843, 2047
BssNAI	GTATAC	1 cut(s)	2342
BssNI	GRCGYC	1 cut(s)	2196
BssT1I	CCWWGG	4 cut(s)	343, 1116, 1419, 1874
Bst1107I	GTATAC	1 cut(s)	2342
Bst2UI	CCWGG	6 cut(s)	104, 488, 593, 1002, 1132, 1808
Bst4CI	ACNGT	7 cut(s)	241, 257, 383, 689, 806, 823, 989
Bst6I	CTCTTC	5 cut(s)	47, 1267, 1439, 1929, 2297
BstACI	GRCGYC	1 cut(s)	2196
BstC8I	GCNNGC	8 cut(s)	323, 507, 579, 1078, 1452, 1533, 1734, 2028
BstDEI	CTNAG	6 cut(s)	154, 332, 1259, 1490, 1762, 1788
BstDSI	CCRYGG	1 cut(s)	1116
BstENI	CCTNNNNNAGG	1 cut(s)	873
BstF5I	GGATG	5 cut(s)	469, 1428, 1867, 1885, 1996
BstHHI	GCGC	1 cut(s)	1450
BstKTI	GATC	9 cut(s)	110, 265, 453, 868, 922, 1007, 1279, 1846, 2050
BstMAI	GTCTC	3 cut(s)	529, 1430, 1922
BstMBI	GATC	9 cut(s)	107, 262, 450, 865, 919, 1004, 1276, 1843, 2047
BstMWI	GCNNNNNNNGC	3 cut(s)	641, 945, 1073
BstNI	CCWGG	6 cut(s)	104, 488, 593, 1002, 1132, 1808
BstNSI	RCATGY	2 cut(s)	577, 1071
BstPAI	GACNNNNGTC	1 cut(s)	345
BstSCI	CCNGG	6 cut(s)	102, 486, 591, 1000, 1130, 1806
BstSFI	CTRYAG	5 cut(s)	302, 645, 1280, 2143, 2379
BstV1I	GCAGC	6 cut(s)	261, 288, 310, 1085, 1226, 2250
BstX2I	RGATCY	4 cut(s)	107, 865, 1276, 1843
BstYI	RGATCY	4 cut(s)	107, 865, 1276, 1843
BstZ17I	GTATAC	1 cut(s)	2342
Bsu36I	CCTNAGG	1 cut(s)	154
BsuRI	GGCC	5 cut(s)	145, 159, 948, 978, 1130
BtgI	CCRYGG	1 cut(s)	1116
BtgZI	GCGATG	2 cut(s)	349, 942
BtsCI	GGATG	5 cut(s)	469, 1428, 1867, 1885, 1996
BtsI	GCAGTG	3 cut(s)	269, 300, 1680
BtsIMutI	CAGTG	6 cut(s)	269, 300, 312, 811, 1680, 2206
Cac8I	GCNNGC	8 cut(s)	323, 507, 579, 1078, 1452, 1533, 1734, 2028
CaiI	CAGNNNCTG	1 cut(s)	502
CfoI	GCGC	1 cut(s)	1450
Cfr10I	RCCGGY	3 cut(s)	505, 1063, 2353
Cfr13I	GGNCC	1 cut(s)	2058
CseI	GACGC	2 cut(s)	676, 2351
CsiI	ACCWGGT	1 cut(s)	591
Csp6I	GTAC	4 cut(s)	690, 907, 1495, 1567
CspCI	CAANNNNNGTGG	2 cut(s)	1354, 1389
CviAII	CATG	7 cut(s)	141, 403, 574, 1068, 1117, 1440, 1931
CviQI	GTAC	4 cut(s)	690, 907, 1495, 1567
DdeI	CTNAG	6 cut(s)	154, 332, 1259, 1490, 1762, 1788
DpnI	GATC	9 cut(s)	109, 264, 452, 867, 921, 1006, 1278, 1845, 2049
DpnII	GATC	9 cut(s)	107, 262, 450, 865, 919, 1004, 1276, 1843, 2047
EaeI	YGGCCR	1 cut(s)	976
Eam1104I	CTCTTC	5 cut(s)	47, 1267, 1439, 1929, 2297
EarI	CTCTTC	5 cut(s)	47, 1267, 1439, 1929, 2297
Ecl136II	GAGCTC	1 cut(s)	71
Eco130I	CCWWGG	4 cut(s)	343, 1116, 1419, 1874
Eco147I	AGGCCT	1 cut(s)	159
Eco24I	GRGCYC	3 cut(s)	73, 1622, 1648
Eco31I	GGTCTC	2 cut(s)	1430, 1922
Eco32I	GATATC	1 cut(s)	2140
Eco47I	GGWCC	1 cut(s)	2058
Eco53kI	GAGCTC	1 cut(s)	71
Eco57I	CTGAAG	1 cut(s)	96
Eco81I	CCTNAGG	1 cut(s)	154
EcoICRI	GAGCTC	1 cut(s)	71
EcoNI	CCTNNNNNAGG	1 cut(s)	873
EcoO109I	RGGNCCY	1 cut(s)	2058
EcoRI	GAATTC	1 cut(s)	167
EcoRII	CCWGG	6 cut(s)	102, 486, 591, 1000, 1130, 1806
EcoRV	GATATC	1 cut(s)	2140
EcoT14I	CCWWGG	4 cut(s)	343, 1116, 1419, 1874
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	3 cut(s)	73, 1622, 1648
ErhI	CCWWGG	4 cut(s)	343, 1116, 1419, 1874
FaeI	CATG	7 cut(s)	144, 406, 577, 1071, 1120, 1443, 1934
FalI	AAGNNNNNCTT	4 cut(s)	1607, 1639, 2291, 2323
FaqI	GGGAC	2 cut(s)	1930, 2092
FatI	CATG	7 cut(s)	140, 402, 573, 1067, 1116, 1439, 1930
FauI	CCCGC	1 cut(s)	1073
FblI	GTMKAC	1 cut(s)	2341
Fnu4HI	GCNGC	6 cut(s)	275, 299, 302, 1074, 1215, 2264
FokI	GGATG	5 cut(s)	456, 1415, 1854, 1892, 2003
FriOI	GRGCYC	3 cut(s)	73, 1622, 1648
Fsp4HI	GCNGC	6 cut(s)	275, 299, 302, 1074, 1215, 2264
FspBI	CTAG	2 cut(s)	90, 794
GlaI	GCGC	1 cut(s)	1449
GluI	GCNGC	6 cut(s)	275, 299, 302, 1074, 1215, 2264
GsaI	CCCAGC	4 cut(s)	138, 513, 608, 1778
GsuI	CTGGAG	2 cut(s)	511, 1706
HaeIII	GGCC	5 cut(s)	145, 159, 948, 978, 1130
HapII	CCGG	4 cut(s)	506, 1064, 2045, 2354
HgaI	GACGC	2 cut(s)	676, 2351
HhaI	GCGC	1 cut(s)	1450
Hin1I	GRCGYC	1 cut(s)	2196
Hin1II	CATG	7 cut(s)	144, 406, 577, 1071, 1120, 1443, 1934
Hin6I	GCGC	1 cut(s)	1448
HinP1I	GCGC	1 cut(s)	1448
HindIII	AAGCTT	1 cut(s)	323
HinfI	GANTC	5 cut(s)	86, 410, 499, 1522, 1793
HpaII	CCGG	4 cut(s)	506, 1064, 2045, 2354
HphI	GGTGA	6 cut(s)	39, 122, 273, 1105, 1718, 1742
Hpy166II	GTNNAC	5 cut(s)	736, 832, 1636, 2296, 2342
Hpy188III	TCNNGA	7 cut(s)	414, 869, 1145, 1193, 1328, 1461, 2165
Hpy8I	GTNNAC	5 cut(s)	736, 832, 1636, 2296, 2342
Hpy99I	CGWCG	1 cut(s)	437
HpyAV	CCTTC	8 cut(s)	47, 59, 156, 1007, 1609, 1633, 1697, 2071
HpyCH4III	ACNGT	7 cut(s)	241, 257, 383, 689, 806, 823, 989
HpyCH4IV	ACGT	1 cut(s)	2196
HpyF10VI	GCNNNNNNNGC	3 cut(s)	641, 945, 1073
HpyF3I	CTNAG	6 cut(s)	154, 332, 1259, 1490, 1762, 1788
HpySE526I	ACGT	1 cut(s)	2196
Hsp92I	GRCGYC	1 cut(s)	2196
Hsp92II	CATG	7 cut(s)	144, 406, 577, 1071, 1120, 1443, 1934
HspAI	GCGC	1 cut(s)	1448
KroI	GCCGGC	1 cut(s)	505
KroNI	GCCGGC	1 cut(s)	507
Kzo9I	GATC	9 cut(s)	107, 262, 450, 865, 919, 1004, 1276, 1843, 2047
LguI	GCTCTTC	1 cut(s)	2297
LmnI	GCTCC	6 cut(s)	68, 1211, 1625, 1628, 1809, 1838
Lsp1109I	GCAGC	6 cut(s)	261, 288, 310, 1085, 1226, 2250
LweI	GCATC	5 cut(s)	529, 622, 771, 1719, 1876
MabI	ACCWGGT	1 cut(s)	591
MaeI	CTAG	2 cut(s)	90, 794
MaeII	ACGT	1 cut(s)	2196
MaeIII	GTNAC	4 cut(s)	338, 1111, 1778, 2391
MalI	GATC	9 cut(s)	109, 264, 452, 867, 921, 1006, 1278, 1845, 2049
MbiI	CCGCTC	1 cut(s)	1724
MboI	GATC	9 cut(s)	107, 262, 450, 865, 919, 1004, 1276, 1843, 2047
MfeI	CAATTG	2 cut(s)	1204, 1737
MflI	RGATCY	4 cut(s)	107, 865, 1276, 1843
MhlI	GDGCHC	3 cut(s)	73, 1622, 1648
MlsI	TGGCCA	1 cut(s)	978
MluNI	TGGCCA	1 cut(s)	978
MlyI	GAGTC	2 cut(s)	493, 1787
MmeI	TCCRAC	2 cut(s)	184, 1314
Mox20I	TGGCCA	1 cut(s)	978
Mph1103I	ATGCAT	1 cut(s)	6
MroNI	GCCGGC	1 cut(s)	505
MroXI	GAANNNNTTC	1 cut(s)	1054
MscI	TGGCCA	1 cut(s)	978
MseI	TTAA	9 cut(s)	672, 684, 801, 933, 951, 1319, 1415, 1515, 2322
MslI	CAYNNNNRTG	3 cut(s)	1673, 1985, 2101
Msp20I	TGGCCA	1 cut(s)	978
MspA1I	CMGCKG	2 cut(s)	301, 1076
MspI	CCGG	4 cut(s)	506, 1064, 2045, 2354
MspR9I	CCNGG	6 cut(s)	104, 488, 593, 1002, 1132, 1808
MunI	CAATTG	2 cut(s)	1204, 1737
Mva1269I	GAATGC	2 cut(s)	1181, 2008
MvaI	CCWGG	6 cut(s)	104, 488, 593, 1002, 1132, 1808
MwoI	GCNNNNNNNGC	3 cut(s)	641, 945, 1073
NaeI	GCCGGC	1 cut(s)	507
NcoI	CCATGG	1 cut(s)	1116
NdeII	GATC	9 cut(s)	107, 262, 450, 865, 919, 1004, 1276, 1843, 2047
NgoMIV	GCCGGC	1 cut(s)	505
NlaIII	CATG	7 cut(s)	144, 406, 577, 1071, 1120, 1443, 1934
NlaIV	GGNNCC	5 cut(s)	867, 1621, 1805, 1834, 2097
NmuCI	GTSAC	2 cut(s)	338, 1111
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	577, 1071
PceI	AGGCCT	1 cut(s)	159
PciSI	GCTCTTC	1 cut(s)	2297
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PctI	GAATGC	2 cut(s)	1181, 2008
PdiI	GCCGGC	1 cut(s)	507
PdmI	GAANNNNTTC	1 cut(s)	1054
PfeI	GAWTC	3 cut(s)	86, 410, 1522
PflFI	GACNNNGTC	1 cut(s)	1109
PflMI	CCANNNNNTGG	1 cut(s)	141
PfoI	TCCNGGA	1 cut(s)	1000
PkrI	GCNGC	6 cut(s)	276, 300, 303, 1075, 1216, 2265
PleI	GAGTC	2 cut(s)	493, 1787
PpsI	GAGTC	2 cut(s)	493, 1787
PpuMI	RGGWCCY	1 cut(s)	2058
PshAI	GACNNNNGTC	1 cut(s)	345
PsiI	TTATAA	1 cut(s)	2241
Psp124BI	GAGCTC	1 cut(s)	73
Psp5II	RGGWCCY	1 cut(s)	2058
Psp6I	CCWGG	6 cut(s)	102, 486, 591, 1000, 1130, 1806
PspFI	CCCAGC	4 cut(s)	134, 509, 604, 1774
PspGI	CCWGG	6 cut(s)	102, 486, 591, 1000, 1130, 1806
PspN4I	GGNNCC	5 cut(s)	867, 1621, 1805, 1834, 2097
PspPI	GGNCC	1 cut(s)	2058
PspPPI	RGGWCCY	1 cut(s)	2058
PstI	CTGCAG	2 cut(s)	306, 1284
PstNI	CAGNNNCTG	1 cut(s)	502
PsuI	RGATCY	4 cut(s)	107, 865, 1276, 1843
PsyI	GACNNNGTC	1 cut(s)	1109
PvuII	CAGCTG	2 cut(s)	301, 1076
RsaI	GTAC	4 cut(s)	691, 908, 1496, 1568
RsaNI	GTAC	4 cut(s)	690, 907, 1495, 1567
RseI	CAYNNNNRTG	3 cut(s)	1673, 1985, 2101
SacI	GAGCTC	1 cut(s)	73
SapI	GCTCTTC	1 cut(s)	2297
SaqAI	TTAA	9 cut(s)	672, 684, 801, 933, 951, 1319, 1415, 1515, 2322
SatI	GCNGC	6 cut(s)	275, 299, 302, 1074, 1215, 2264
Sau3AI	GATC	9 cut(s)	107, 262, 450, 865, 919, 1004, 1276, 1843, 2047
Sau96I	GGNCC	1 cut(s)	2058
SchI	GAGTC	2 cut(s)	493, 1787
ScrFI	CCNGG	6 cut(s)	104, 488, 593, 1002, 1132, 1808
SduI	GDGCHC	3 cut(s)	73, 1622, 1648
SexAI	ACCWGGT	1 cut(s)	591
SfaNI	GCATC	5 cut(s)	529, 622, 771, 1719, 1876
SfcI	CTRYAG	5 cut(s)	302, 645, 1280, 2143, 2379
SinI	GGWCC	1 cut(s)	2058
SmiMI	CAYNNNNRTG	3 cut(s)	1673, 1985, 2101
SmlI	CTYRAG	1 cut(s)	1045
SmoI	CTYRAG	1 cut(s)	1045
SseBI	AGGCCT	1 cut(s)	159
SsiI	CCGC	3 cut(s)	699, 1080, 1724
SspMI	CTAG	2 cut(s)	90, 794
SstI	GAGCTC	1 cut(s)	73
StuI	AGGCCT	1 cut(s)	159
StyD4I	CCNGG	6 cut(s)	102, 486, 591, 1000, 1130, 1806
StyI	CCWWGG	4 cut(s)	343, 1116, 1419, 1874
TaaI	ACNGT	7 cut(s)	241, 257, 383, 689, 806, 823, 989
TaiI	ACGT	1 cut(s)	2199
TaqI	TCGA	6 cut(s)	1192, 1224, 1483, 1720, 1768, 1796
TatI	WGTACW	1 cut(s)	689
TfiI	GAWTC	3 cut(s)	86, 410, 1522
Tru1I	TTAA	9 cut(s)	672, 684, 801, 933, 951, 1319, 1415, 1515, 2322
Tru9I	TTAA	9 cut(s)	672, 684, 801, 933, 951, 1319, 1415, 1515, 2322
TscAI	CASTG	6 cut(s)	276, 300, 319, 811, 1680, 2206
TseFI	GTSAC	2 cut(s)	338, 1111
TseI	GCWGC	6 cut(s)	274, 298, 301, 1073, 1214, 2263
Tsp45I	GTSAC	2 cut(s)	338, 1111
TspDTI	ATGAA	9 cut(s)	554, 1256, 1830, 1896, 1946, 1947, 2007, 2364, 2387
TspGWI	ACGGA	2 cut(s)	600, 849
TspRI	CASTG	6 cut(s)	276, 300, 319, 811, 1680, 2206
Tth111I	GACNNNGTC	1 cut(s)	1109
Van91I	CCANNNNNTGG	1 cut(s)	141
VpaK11BI	GGWCC	1 cut(s)	2058
XagI	CCTNNNNNAGG	1 cut(s)	873
XapI	RAATTY	5 cut(s)	167, 207, 1404, 1479, 1994
XceI	RCATGY	2 cut(s)	577, 1071
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1123, 1263
XmiI	GTMKAC	1 cut(s)	2341
XmnI	GAANNNNTTC	1 cut(s)	1054
XspI	CTAG	2 cut(s)	90, 794
ZraI	GACGTC	1 cut(s)	2197
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.