No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0130961 RchiOBHm_Chr2g0131531 RchiOBHm_Chr2g0131581 RchiOBHm_Chr2g0131861 |
| rosa_laevigata | RLG00000019215 RLG00000019216 RLG00000019217 |
| rosa_multiflora | Rmu_sc0001159.1_g000032 |
| rosa_roxburghii | Rroxscaffold_2G00112510 Rroxscaffold_2G00112560 Rroxscaffold_2G00112570 Rroxscaffold_2G00112790 Rroxscaffold_2G00113420 |
| rosa_rugosa | Rorug02G0291900 Rorug02G0294200 Rorug02G0294300 Rorug02G0300500 |
| rosa_samantha | Rh2BG353800 Rh2BG359700 Rh2BG469300 Rh2DG376800 Rh5CG304700 |
| rosa_wichuraiana | Rw2G028640 Rw2G028710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 18 |
| AcsI | RAATTY | 1 cut(s) | 106 |
| AgsI | TTSAA | 1 cut(s) | 104 |
| AluBI | AGCT | 1 cut(s) | 55 |
| AluI | AGCT | 1 cut(s) | 55 |
| AlwI | GGATC | 1 cut(s) | 18 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 10 |
| ApoI | RAATTY | 1 cut(s) | 106 |
| BbsI | GAAGAC | 1 cut(s) | 70 |
| BfaI | CTAG | 1 cut(s) | 147 |
| BfmI | CTRYAG | 1 cut(s) | 11 |
| BmiI | GGNNCC | 1 cut(s) | 49 |
| BmsI | GCATC | 1 cut(s) | 31 |
| BpiI | GAAGAC | 1 cut(s) | 70 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 143, 173 |
| Bse1I | ACTGG | 1 cut(s) | 66 |
| BseNI | ACTGG | 1 cut(s) | 66 |
| BseYI | CCCAGC | 1 cut(s) | 51 |
| BslFI | GGGAC | 1 cut(s) | 157 |
| BsmFI | GGGAC | 1 cut(s) | 157 |
| Bsp143I | GATC | 1 cut(s) | 23 |
| BspLI | GGNNCC | 1 cut(s) | 49 |
| BspMAI | CTGCAG | 1 cut(s) | 15 |
| BspPI | GGATC | 1 cut(s) | 18 |
| BsrI | ACTGG | 1 cut(s) | 66 |
| BssMI | GATC | 1 cut(s) | 23 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 10 |
| BstC8I | GCNNGC | 2 cut(s) | 15, 124 |
| BstKTI | GATC | 1 cut(s) | 26 |
| BstMBI | GATC | 1 cut(s) | 23 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstSFI | CTRYAG | 1 cut(s) | 11 |
| BstV2I | GAAGAC | 1 cut(s) | 70 |
| BstX2I | RGATCY | 1 cut(s) | 23 |
| BstYI | RGATCY | 1 cut(s) | 23 |
| BtsIMutI | CAGTG | 1 cut(s) | 73 |
| Cac8I | GCNNGC | 2 cut(s) | 15, 124 |
| CaiI | CAGNNNCTG | 1 cut(s) | 10 |
| CviAII | CATG | 1 cut(s) | 29 |
| CviJI | RGCY | 3 cut(s) | 17, 55, 92 |
| CviKI_1 | RGCY | 3 cut(s) | 17, 55, 92 |
| DpnI | GATC | 1 cut(s) | 25 |
| DpnII | GATC | 1 cut(s) | 23 |
| FaeI | CATG | 1 cut(s) | 32 |
| FaiI | YATR | 2 cut(s) | 30, 136 |
| FaqI | GGGAC | 1 cut(s) | 157 |
| FatI | CATG | 1 cut(s) | 28 |
| FspBI | CTAG | 1 cut(s) | 147 |
| GsaI | CCCAGC | 1 cut(s) | 55 |
| Hin1II | CATG | 1 cut(s) | 32 |
| HinfI | GANTC | 1 cut(s) | 187 |
| Hpy166II | GTNNAC | 1 cut(s) | 191 |
| Hpy188I | TCNGA | 2 cut(s) | 40, 178 |
| Hpy8I | GTNNAC | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 13, 122 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| Hsp92II | CATG | 1 cut(s) | 32 |
| Kzo9I | GATC | 1 cut(s) | 23 |
| LmnI | GCTCC | 1 cut(s) | 60 |
| LpnPI | CCDG | 5 cut(s) | 30, 65, 79, 142, 147 |
| LweI | GCATC | 1 cut(s) | 31 |
| MaeI | CTAG | 1 cut(s) | 147 |
| MaeIII | GTNAC | 1 cut(s) | 6 |
| MalI | GATC | 1 cut(s) | 25 |
| MboI | GATC | 1 cut(s) | 23 |
| MboII | GAAGA | 2 cut(s) | 70, 92 |
| MflI | RGATCY | 1 cut(s) | 23 |
| MluCI | AATT | 2 cut(s) | 106, 181 |
| MlyI | GAGTC | 1 cut(s) | 196 |
| MnlI | CCTC | 3 cut(s) | 46, 134, 145 |
| MseI | TTAA | 1 cut(s) | 170 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NdeII | GATC | 1 cut(s) | 23 |
| NlaIII | CATG | 1 cut(s) | 32 |
| NlaIV | GGNNCC | 1 cut(s) | 49 |
| PleI | GAGTC | 1 cut(s) | 195 |
| PpsI | GAGTC | 1 cut(s) | 195 |
| PspFI | CCCAGC | 1 cut(s) | 51 |
| PspN4I | GGNNCC | 1 cut(s) | 49 |
| PstI | CTGCAG | 1 cut(s) | 15 |
| PstNI | CAGNNNCTG | 1 cut(s) | 10 |
| PsuI | RGATCY | 1 cut(s) | 23 |
| SaqAI | TTAA | 1 cut(s) | 170 |
| Sau3AI | GATC | 1 cut(s) | 23 |
| SchI | GAGTC | 1 cut(s) | 196 |
| SetI | ASST | 4 cut(s) | 57, 156, 161, 166 |
| SfaNI | GCATC | 1 cut(s) | 31 |
| SfcI | CTRYAG | 1 cut(s) | 11 |
| Sse9I | AATT | 2 cut(s) | 106, 181 |
| SspMI | CTAG | 1 cut(s) | 147 |
| TaqI | TCGA | 1 cut(s) | 185 |
| TasI | AATT | 2 cut(s) | 106, 181 |
| Tru1I | TTAA | 1 cut(s) | 170 |
| Tru9I | TTAA | 1 cut(s) | 170 |
| TscAI | CASTG | 1 cut(s) | 73 |
| TspDTI | ATGAA | 1 cut(s) | 70 |
| TspRI | CASTG | 1 cut(s) | 73 |
| XapI | RAATTY | 1 cut(s) | 106 |
| XspI | CTAG | 1 cut(s) | 147 |