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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0130961 RchiOBHm_Chr2g0131531 RchiOBHm_Chr2g0131581 RchiOBHm_Chr2g0131861 |
| rosa_laevigata | RLG00000019215 RLG00000019216 RLG00000019217 |
| rosa_multiflora | Rmu_sc0001159.1_g000032 |
| rosa_roxburghii | Rroxscaffold_2G00112510 Rroxscaffold_2G00112560 Rroxscaffold_2G00112570 Rroxscaffold_2G00112790 Rroxscaffold_2G00113420 |
| rosa_rugosa | Rorug02G0291900 Rorug02G0294200 Rorug02G0294300 Rorug02G0300500 |
| rosa_samantha | Rh2BG353800 Rh2BG359700 Rh2BG469300 Rh2DG376800 Rh5CG304700 |
| rosa_wichuraiana | Rw2G028640 Rw2G028710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 571 |
| Acc36I | ACCTGC | 1 cut(s) | 1374 |
| AccB1I | GGYRCC | 3 cut(s) | 1394, 1723, 1809 |
| AccI | GTMKAC | 1 cut(s) | 1092 |
| AccII | CGCG | 1 cut(s) | 1152 |
| AciI | CCGC | 1 cut(s) | 944 |
| AclWI | GGATC | 5 cut(s) | 309, 1616, 1790, 1803, 1967 |
| AcoI | YGGCCR | 4 cut(s) | 797, 1041, 1253, 1708 |
| AcsI | RAATTY | 4 cut(s) | 98, 256, 1464, 1996 |
| AcuI | CTGAAG | 1 cut(s) | 432 |
| AcyI | GRCGYC | 1 cut(s) | 1810 |
| AfaI | GTAC | 3 cut(s) | 186, 894, 1149 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 432 |
| AflIII | ACRYGT | 2 cut(s) | 1150, 1524 |
| AgsI | TTSAA | 4 cut(s) | 40, 352, 389, 1585 |
| AhlI | ACTAGT | 1 cut(s) | 757 |
| AjnI | CCWGG | 2 cut(s) | 799, 1705 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1823, 1855 |
| Alw21I | GWGCWC | 2 cut(s) | 1642, 1672 |
| Alw26I | GTCTC | 6 cut(s) | 365, 557, 867, 1015, 1094, 1159 |
| Alw44I | GTGCAC | 1 cut(s) | 1638 |
| AlwI | GGATC | 5 cut(s) | 309, 1616, 1790, 1803, 1967 |
| Ama87I | CYCGRG | 2 cut(s) | 470, 1735 |
| AoxI | GGCC | 7 cut(s) | 192, 797, 1041, 1253, 1410, 1434, 1708 |
| ApaLI | GTGCAC | 1 cut(s) | 1638 |
| ApeKI | GCWGC | 5 cut(s) | 17, 518, 789, 848, 1280 |
| ApoI | RAATTY | 4 cut(s) | 98, 256, 1464, 1996 |
| AseI | ATTAAT | 3 cut(s) | 1086, 1895, 2058 |
| AspLEI | GCGC | 1 cut(s) | 1812 |
| AspS9I | GGNCC | 4 cut(s) | 193, 435, 1410, 1434 |
| AsuC2I | CCSGG | 1 cut(s) | 796 |
| AsuHPI | GGTGA | 5 cut(s) | 16, 221, 415, 815, 1835 |
| AvaI | CYCGRG | 2 cut(s) | 470, 1735 |
| AvaII | GGWCC | 1 cut(s) | 435 |
| BaeGI | GKGCMC | 1 cut(s) | 1642 |
| BalI | TGGCCA | 3 cut(s) | 1043, 1255, 1710 |
| BamHI | GGATCC | 1 cut(s) | 1795 |
| BanI | GGYRCC | 3 cut(s) | 1394, 1723, 1809 |
| BanII | GRGCYC | 1 cut(s) | 1672 |
| BbsI | GAAGAC | 1 cut(s) | 1995 |
| Bbv12I | GWGCWC | 2 cut(s) | 1642, 1672 |
| BbvCI | CCTCAGC | 2 cut(s) | 360, 663 |
| BbvI | GCAGC | 5 cut(s) | 4, 505, 776, 835, 1292 |
| BccI | CCATC | 3 cut(s) | 1424, 1448, 1600 |
| BceAI | ACGGC | 3 cut(s) | 271, 557, 1711 |
| BciT130I | CCWGG | 2 cut(s) | 801, 1707 |
| BclI | TGATCA | 2 cut(s) | 6, 1627 |
| BcnI | CCSGG | 1 cut(s) | 796 |
| BcoDI | GTCTC | 6 cut(s) | 365, 557, 867, 1015, 1094, 1159 |
| BcuI | ACTAGT | 1 cut(s) | 757 |
| BfaI | CTAG | 3 cut(s) | 171, 758, 1265 |
| BfmI | CTRYAG | 1 cut(s) | 1278 |
| BfoI | RGCGCY | 1 cut(s) | 1813 |
| BfuAI | ACCTGC | 1 cut(s) | 1374 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 541 |
| BisI | GCNGC | 5 cut(s) | 18, 519, 790, 849, 1281 |
| BlsI | GCNGC | 5 cut(s) | 19, 520, 791, 850, 1282 |
| Bme1390I | CCNGG | 3 cut(s) | 796, 801, 1707 |
| Bme18I | GGWCC | 1 cut(s) | 435 |
| BmeT110I | CYCGRG | 2 cut(s) | 470, 1735 |
| BmgT120I | GGNCC | 4 cut(s) | 193, 435, 1410, 1434 |
| BmiI | GGNNCC | 7 cut(s) | 436, 1396, 1435, 1691, 1725, 1797, 1811 |
| BmrFI | CCNGG | 3 cut(s) | 796, 801, 1707 |
| BmsI | GCATC | 4 cut(s) | 484, 991, 1219, 1447 |
| BpiI | GAAGAC | 1 cut(s) | 1995 |
| Bpu10I | CCTNAGC | 4 cut(s) | 360, 618, 663, 1926 |
| BpuEI | CTTGAG | 1 cut(s) | 1118 |
| BpuMI | CCSGG | 1 cut(s) | 796 |
| BsaAI | YACGTR | 1 cut(s) | 188 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1626 |
| BsaHI | GRCGYC | 1 cut(s) | 1810 |
| BsaI | GGTCTC | 2 cut(s) | 1015, 1094 |
| BsaJI | CCNNGG | 3 cut(s) | 983, 1120, 1515 |
| BsaWI | WCCGGW | 1 cut(s) | 106 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1362, 1392 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 432 |
| Bse118I | RCCGGY | 1 cut(s) | 514 |
| Bse1I | ACTGG | 4 cut(s) | 303, 1044, 1825, 1900 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1626 |
| BseBI | CCWGG | 2 cut(s) | 801, 1707 |
| BseDI | CCNNGG | 3 cut(s) | 983, 1120, 1515 |
| BseGI | GGATG | 4 cut(s) | 115, 1234, 1652, 1755 |
| BseJI | GATNNNNATC | 1 cut(s) | 1626 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 432 |
| BseMII | CTCAG | 5 cut(s) | 351, 654, 825, 1593, 1917 |
| BseNI | ACTGG | 4 cut(s) | 303, 1044, 1825, 1900 |
| BseRI | GAGGAG | 4 cut(s) | 383, 611, 653, 656 |
| BseSI | GKGCMC | 1 cut(s) | 1642 |
| BseXI | GCAGC | 5 cut(s) | 4, 505, 776, 835, 1292 |
| Bsh1236I | CGCG | 1 cut(s) | 1152 |
| BshFI | GGCC | 7 cut(s) | 194, 799, 1043, 1255, 1412, 1436, 1710 |
| BshNI | GGYRCC | 3 cut(s) | 1394, 1723, 1809 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1642, 1672 |
| BsiHKCI | CYCGRG | 2 cut(s) | 470, 1735 |
| BsiSI | CCGG | 3 cut(s) | 107, 515, 796 |
| BslFI | GGGAC | 3 cut(s) | 517, 1252, 2033 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 432 |
| BsmAI | GTCTC | 6 cut(s) | 365, 557, 867, 1015, 1094, 1159 |
| BsmBI | CGTCTC | 2 cut(s) | 867, 1159 |
| BsmFI | GGGAC | 3 cut(s) | 517, 1252, 2033 |
| BsmI | GAATGC | 1 cut(s) | 1920 |
| BsnI | GGCC | 7 cut(s) | 194, 799, 1043, 1255, 1412, 1436, 1710 |
| Bso31I | GGTCTC | 2 cut(s) | 1015, 1094 |
| BsoBI | CYCGRG | 2 cut(s) | 470, 1735 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1642, 1672 |
| Bsp19I | CCATGG | 2 cut(s) | 1120, 1515 |
| BspACI | CCGC | 1 cut(s) | 944 |
| BspANI | GGCC | 7 cut(s) | 194, 799, 1043, 1255, 1412, 1436, 1710 |
| BspCNI | CTCAG | 5 cut(s) | 352, 655, 826, 1594, 1918 |
| BspFNI | CGCG | 1 cut(s) | 1152 |
| BspHI | TCATGA | 3 cut(s) | 1177, 1560, 1573 |
| BspLI | GGNNCC | 7 cut(s) | 436, 1396, 1435, 1691, 1725, 1797, 1811 |
| BspMAI | CTGCAG | 1 cut(s) | 1282 |
| BspMI | ACCTGC | 1 cut(s) | 1374 |
| BspPI | GGATC | 5 cut(s) | 309, 1616, 1790, 1803, 1967 |
| BspT107I | GGYRCC | 3 cut(s) | 1394, 1723, 1809 |
| BspTNI | GGTCTC | 2 cut(s) | 1015, 1094 |
| BsrFI | RCCGGY | 1 cut(s) | 514 |
| BsrI | ACTGG | 4 cut(s) | 303, 1044, 1825, 1900 |
| BssAI | RCCGGY | 1 cut(s) | 514 |
| BssECI | CCNNGG | 3 cut(s) | 983, 1120, 1515 |
| BssNI | GRCGYC | 1 cut(s) | 1810 |
| BssT1I | CCWWGG | 3 cut(s) | 983, 1120, 1515 |
| Bst2UI | CCWGG | 2 cut(s) | 801, 1707 |
| Bst4CI | ACNGT | 5 cut(s) | 233, 508, 568, 657, 1222 |
| Bst6I | CTCTTC | 4 cut(s) | 555, 948, 1580, 1770 |
| BstACI | GRCGYC | 1 cut(s) | 1810 |
| BstBAI | YACGTR | 1 cut(s) | 188 |
| BstC8I | GCNNGC | 3 cut(s) | 241, 516, 1918 |
| BstDEI | CTNAG | 8 cut(s) | 360, 618, 663, 834, 1593, 1602, 1926, 2013 |
| BstDSI | CCRYGG | 2 cut(s) | 1120, 1515 |
| BstF5I | GGATG | 4 cut(s) | 115, 1234, 1652, 1755 |
| BstFNI | CGCG | 1 cut(s) | 1152 |
| BstH2I | RGCGCY | 1 cut(s) | 1813 |
| BstHHI | GCGC | 1 cut(s) | 1812 |
| BstMAI | GTCTC | 6 cut(s) | 365, 557, 867, 1015, 1094, 1159 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 541, 1286, 1394, 2078 |
| BstNI | CCWGG | 2 cut(s) | 801, 1707 |
| BstNSI | RCATGY | 2 cut(s) | 1528, 2090 |
| BstSCI | CCNGG | 3 cut(s) | 794, 799, 1705 |
| BstSFI | CTRYAG | 1 cut(s) | 1278 |
| BstSLI | GKGCMC | 1 cut(s) | 1642 |
| BstUI | CGCG | 1 cut(s) | 1152 |
| BstV1I | GCAGC | 5 cut(s) | 4, 505, 776, 835, 1292 |
| BstV2I | GAAGAC | 1 cut(s) | 1995 |
| BstX2I | RGATCY | 1 cut(s) | 1795 |
| BstYI | RGATCY | 1 cut(s) | 1795 |
| BsuRI | GGCC | 7 cut(s) | 194, 799, 1043, 1255, 1412, 1436, 1710 |
| BtgI | CCRYGG | 2 cut(s) | 1120, 1515 |
| BtsCI | GGATG | 4 cut(s) | 115, 1234, 1652, 1755 |
| BtsIMutI | CAGTG | 3 cut(s) | 573, 585, 1907 |
| BveI | ACCTGC | 1 cut(s) | 1374 |
| Cac8I | GCNNGC | 3 cut(s) | 241, 516, 1918 |
| CciI | TCATGA | 3 cut(s) | 1177, 1560, 1573 |
| CfoI | GCGC | 1 cut(s) | 1812 |
| Cfr10I | RCCGGY | 1 cut(s) | 514 |
| Cfr13I | GGNCC | 4 cut(s) | 193, 435, 1410, 1434 |
| CseI | GACGC | 1 cut(s) | 1141 |
| Csp6I | GTAC | 3 cut(s) | 185, 893, 1148 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1371, 1406, 1930, 1965 |
| CviQI | GTAC | 3 cut(s) | 185, 893, 1148 |
| DdeI | CTNAG | 8 cut(s) | 360, 618, 663, 834, 1593, 1602, 1926, 2013 |
| DinI | GGCGCC | 1 cut(s) | 1811 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 571 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 571 |
| EaeI | YGGCCR | 4 cut(s) | 797, 1041, 1253, 1708 |
| Eam1104I | CTCTTC | 4 cut(s) | 555, 948, 1580, 1770 |
| EarI | CTCTTC | 4 cut(s) | 555, 948, 1580, 1770 |
| Ecl136II | GAGCTC | 1 cut(s) | 1670 |
| Eco130I | CCWWGG | 3 cut(s) | 983, 1120, 1515 |
| Eco24I | GRGCYC | 1 cut(s) | 1672 |
| Eco31I | GGTCTC | 2 cut(s) | 1015, 1094 |
| Eco47I | GGWCC | 1 cut(s) | 435 |
| Eco53kI | GAGCTC | 1 cut(s) | 1670 |
| Eco57I | CTGAAG | 1 cut(s) | 432 |
| Eco88I | CYCGRG | 2 cut(s) | 470, 1735 |
| EcoICRI | GAGCTC | 1 cut(s) | 1670 |
| EcoRII | CCWGG | 2 cut(s) | 799, 1705 |
| EcoT14I | CCWWGG | 3 cut(s) | 983, 1120, 1515 |
| EcoT38I | GRGCYC | 1 cut(s) | 1672 |
| EgeI | GGCGCC | 1 cut(s) | 1811 |
| EheI | GGCGCC | 1 cut(s) | 1811 |
| ErhI | CCWWGG | 3 cut(s) | 983, 1120, 1515 |
| Esp3I | CGTCTC | 2 cut(s) | 867, 1159 |
| FaqI | GGGAC | 3 cut(s) | 517, 1252, 2033 |
| FbaI | TGATCA | 2 cut(s) | 6, 1627 |
| FblI | GTMKAC | 1 cut(s) | 1092 |
| Fnu4HI | GCNGC | 5 cut(s) | 18, 519, 790, 849, 1281 |
| FokI | GGATG | 4 cut(s) | 122, 1241, 1659, 1762 |
| FriOI | GRGCYC | 1 cut(s) | 1672 |
| Fsp4HI | GCNGC | 5 cut(s) | 18, 519, 790, 849, 1281 |
| FspBI | CTAG | 3 cut(s) | 171, 758, 1265 |
| GlaI | GCGC | 1 cut(s) | 1811 |
| GluI | GCNGC | 5 cut(s) | 18, 519, 790, 849, 1281 |
| HaeII | RGCGCY | 1 cut(s) | 1813 |
| HaeIII | GGCC | 7 cut(s) | 194, 799, 1043, 1255, 1412, 1436, 1710 |
| HapII | CCGG | 3 cut(s) | 107, 515, 796 |
| HgaI | GACGC | 1 cut(s) | 1141 |
| HhaI | GCGC | 1 cut(s) | 1812 |
| Hin1I | GRCGYC | 1 cut(s) | 1810 |
| Hin6I | GCGC | 1 cut(s) | 1810 |
| HinP1I | GCGC | 1 cut(s) | 1810 |
| HincII | GTYRAC | 3 cut(s) | 51, 736, 1093 |
| HindII | GTYRAC | 3 cut(s) | 51, 736, 1093 |
| HinfI | GANTC | 5 cut(s) | 466, 1049, 1181, 1765, 1876 |
| HpaII | CCGG | 3 cut(s) | 107, 515, 796 |
| HphI | GGTGA | 5 cut(s) | 16, 221, 415, 815, 1835 |
| Hpy166II | GTNNAC | 6 cut(s) | 51, 736, 883, 1093, 1640, 2041 |
| Hpy188I | TCNGA | 5 cut(s) | 439, 1026, 1167, 1646, 1881 |
| Hpy8I | GTNNAC | 6 cut(s) | 51, 736, 883, 1093, 1640, 2041 |
| HpyAV | CCTTC | 8 cut(s) | 124, 407, 477, 715, 922, 1473, 1580, 1969 |
| HpyCH4III | ACNGT | 5 cut(s) | 233, 508, 568, 657, 1222 |
| HpyCH4IV | ACGT | 1 cut(s) | 187 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 541, 1286, 1394, 2078 |
| HpyF3I | CTNAG | 8 cut(s) | 360, 618, 663, 834, 1593, 1602, 1926, 2013 |
| HpySE526I | ACGT | 1 cut(s) | 187 |
| Hsp92I | GRCGYC | 1 cut(s) | 1810 |
| HspAI | GCGC | 1 cut(s) | 1810 |
| KasI | GGCGCC | 1 cut(s) | 1809 |
| KroI | GCCGGC | 1 cut(s) | 514 |
| KroNI | GCCGGC | 1 cut(s) | 516 |
| Ksp22I | TGATCA | 2 cut(s) | 6, 1627 |
| LmnI | GCTCC | 2 cut(s) | 786, 797 |
| Lsp1109I | GCAGC | 5 cut(s) | 4, 505, 776, 835, 1292 |
| LweI | GCATC | 4 cut(s) | 484, 991, 1219, 1447 |
| MaeI | CTAG | 3 cut(s) | 171, 758, 1265 |
| MaeII | ACGT | 1 cut(s) | 187 |
| MaeIII | GTNAC | 3 cut(s) | 1216, 1502, 1967 |
| MfeI | CAATTG | 1 cut(s) | 136 |
| MflI | RGATCY | 1 cut(s) | 1795 |
| MhlI | GDGCHC | 2 cut(s) | 1642, 1672 |
| MlsI | TGGCCA | 3 cut(s) | 1043, 1255, 1710 |
| MluI | ACGCGT | 1 cut(s) | 1150 |
| MluNI | TGGCCA | 3 cut(s) | 1043, 1255, 1710 |
| Mly113I | GGCGCC | 1 cut(s) | 1810 |
| MmeI | TCCRAC | 3 cut(s) | 270, 1320, 1509 |
| Mox20I | TGGCCA | 3 cut(s) | 1043, 1255, 1710 |
| MroNI | GCCGGC | 1 cut(s) | 514 |
| MscI | TGGCCA | 3 cut(s) | 1043, 1255, 1710 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1645 |
| Msp20I | TGGCCA | 3 cut(s) | 1043, 1255, 1710 |
| MspA1I | CMGCKG | 2 cut(s) | 17, 1388 |
| MspI | CCGG | 3 cut(s) | 107, 515, 796 |
| MspR9I | CCNGG | 3 cut(s) | 796, 801, 1707 |
| MunI | CAATTG | 1 cut(s) | 136 |
| Mva1269I | GAATGC | 1 cut(s) | 1920 |
| MvaI | CCWGG | 2 cut(s) | 801, 1707 |
| MvnI | CGCG | 1 cut(s) | 1152 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 541, 1286, 1394, 2078 |
| NaeI | GCCGGC | 1 cut(s) | 516 |
| NarI | GGCGCC | 1 cut(s) | 1810 |
| NciI | CCSGG | 1 cut(s) | 796 |
| NcoI | CCATGG | 2 cut(s) | 1120, 1515 |
| NgoMIV | GCCGGC | 1 cut(s) | 514 |
| NlaIV | GGNNCC | 7 cut(s) | 436, 1396, 1435, 1691, 1725, 1797, 1811 |
| NmuCI | GTSAC | 2 cut(s) | 1216, 1502 |
| NspI | RCATGY | 2 cut(s) | 1528, 2090 |
| PagI | TCATGA | 3 cut(s) | 1177, 1560, 1573 |
| PciI | ACATGT | 1 cut(s) | 1524 |
| PctI | GAATGC | 1 cut(s) | 1920 |
| PdiI | GCCGGC | 1 cut(s) | 516 |
| PfeI | GAWTC | 5 cut(s) | 466, 1049, 1181, 1765, 1876 |
| PkrI | GCNGC | 5 cut(s) | 19, 520, 791, 850, 1282 |
| PluTI | GGCGCC | 1 cut(s) | 1813 |
| Ppu21I | YACGTR | 1 cut(s) | 188 |
| PscI | ACATGT | 1 cut(s) | 1524 |
| PshBI | ATTAAT | 3 cut(s) | 1086, 1895, 2058 |
| Psp124BI | GAGCTC | 1 cut(s) | 1672 |
| Psp6I | CCWGG | 2 cut(s) | 799, 1705 |
| PspGI | CCWGG | 2 cut(s) | 799, 1705 |
| PspN4I | GGNNCC | 7 cut(s) | 436, 1396, 1435, 1691, 1725, 1797, 1811 |
| PspPI | GGNCC | 4 cut(s) | 193, 435, 1410, 1434 |
| PstI | CTGCAG | 1 cut(s) | 1282 |
| PsuI | RGATCY | 1 cut(s) | 1795 |
| PvuII | CAGCTG | 2 cut(s) | 17, 1388 |
| RsaI | GTAC | 3 cut(s) | 186, 894, 1149 |
| RsaNI | GTAC | 3 cut(s) | 185, 893, 1148 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1645 |
| SacI | GAGCTC | 1 cut(s) | 1672 |
| SalI | GTCGAC | 1 cut(s) | 1091 |
| SatI | GCNGC | 5 cut(s) | 18, 519, 790, 849, 1281 |
| Sau96I | GGNCC | 4 cut(s) | 193, 435, 1410, 1434 |
| ScrFI | CCNGG | 3 cut(s) | 796, 801, 1707 |
| SduI | GDGCHC | 2 cut(s) | 1642, 1672 |
| SfaNI | GCATC | 4 cut(s) | 484, 991, 1219, 1447 |
| SfcI | CTRYAG | 1 cut(s) | 1278 |
| SfoI | GGCGCC | 1 cut(s) | 1811 |
| SinI | GGWCC | 1 cut(s) | 435 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1645 |
| SmlI | CTYRAG | 1 cut(s) | 1097 |
| SmoI | CTYRAG | 1 cut(s) | 1097 |
| SpeI | ACTAGT | 1 cut(s) | 757 |
| SsiI | CCGC | 1 cut(s) | 944 |
| SspDI | GGCGCC | 1 cut(s) | 1809 |
| SspI | AATATT | 2 cut(s) | 553, 889 |
| SspMI | CTAG | 3 cut(s) | 171, 758, 1265 |
| SstI | GAGCTC | 1 cut(s) | 1672 |
| StyD4I | CCNGG | 3 cut(s) | 794, 799, 1705 |
| StyI | CCWWGG | 3 cut(s) | 983, 1120, 1515 |
| TaaI | ACNGT | 5 cut(s) | 233, 508, 568, 657, 1222 |
| TaiI | ACGT | 1 cut(s) | 190 |
| TaqI | TCGA | 5 cut(s) | 304, 1092, 1477, 1620, 1672 |
| TfiI | GAWTC | 5 cut(s) | 466, 1049, 1181, 1765, 1876 |
| TscAI | CASTG | 3 cut(s) | 573, 585, 1907 |
| TseFI | GTSAC | 2 cut(s) | 1216, 1502 |
| TseI | GCWGC | 5 cut(s) | 17, 518, 789, 848, 1280 |
| Tsp45I | GTSAC | 2 cut(s) | 1216, 1502 |
| TspGWI | ACGGA | 1 cut(s) | 1788 |
| TspRI | CASTG | 3 cut(s) | 573, 585, 1907 |
| VneI | GTGCAC | 1 cut(s) | 1638 |
| VpaK11BI | GGWCC | 1 cut(s) | 435 |
| VspI | ATTAAT | 3 cut(s) | 1086, 1895, 2058 |
| XapI | RAATTY | 4 cut(s) | 98, 256, 1464, 1996 |
| XceI | RCATGY | 2 cut(s) | 1528, 2090 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1051 |
| XmiI | GTMKAC | 1 cut(s) | 1092 |
| XspI | CTAG | 3 cut(s) | 171, 758, 1265 |