No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0130961 RchiOBHm_Chr2g0131531 RchiOBHm_Chr2g0131581 RchiOBHm_Chr2g0131861 |
| rosa_laevigata | RLG00000019215 RLG00000019216 RLG00000019217 |
| rosa_multiflora | Rmu_sc0001159.1_g000032 |
| rosa_roxburghii | Rroxscaffold_2G00112510 Rroxscaffold_2G00112560 Rroxscaffold_2G00112570 Rroxscaffold_2G00112790 Rroxscaffold_2G00113420 |
| rosa_rugosa | Rorug02G0291900 Rorug02G0294200 Rorug02G0294300 Rorug02G0300500 |
| rosa_samantha | Rh2BG353800 Rh2BG359700 Rh2BG469300 Rh2DG376800 Rh5CG304700 |
| rosa_wichuraiana | Rw2G028640 Rw2G028710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 250 |
| AfaI | GTAC | 2 cut(s) | 5, 204 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 21 |
| AflIII | ACRYGT | 1 cut(s) | 6 |
| AluBI | AGCT | 1 cut(s) | 222 |
| AluI | AGCT | 1 cut(s) | 222 |
| Alw26I | GTCTC | 2 cut(s) | 129, 168 |
| AlwI | GGATC | 1 cut(s) | 250 |
| ApeKI | GCWGC | 1 cut(s) | 219 |
| AsuII | TTCGAA | 1 cut(s) | 33 |
| BbvCI | CCTCAGC | 1 cut(s) | 284 |
| BbvI | GCAGC | 1 cut(s) | 231 |
| BccI | CCATC | 2 cut(s) | 68, 94 |
| BcoDI | GTCTC | 2 cut(s) | 129, 168 |
| BfaI | CTAG | 1 cut(s) | 132 |
| BisI | GCNGC | 1 cut(s) | 220 |
| BlsI | GCNGC | 1 cut(s) | 221 |
| BmsI | GCATC | 2 cut(s) | 46, 159 |
| Bpu10I | CCTNAGC | 1 cut(s) | 284 |
| Bpu14I | TTCGAA | 1 cut(s) | 33 |
| BpuEI | CTTGAG | 1 cut(s) | 221 |
| BsaAI | YACGTR | 1 cut(s) | 7 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 21 |
| Bse1I | ACTGG | 1 cut(s) | 315 |
| BseGI | GGATG | 3 cut(s) | 61, 65, 174 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 21 |
| BseMII | CTCAG | 1 cut(s) | 298 |
| BseNI | ACTGG | 1 cut(s) | 315 |
| BseXI | GCAGC | 1 cut(s) | 231 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 21 |
| BsmAI | GTCTC | 2 cut(s) | 129, 168 |
| BsmBI | CGTCTC | 1 cut(s) | 168 |
| Bsp119I | TTCGAA | 1 cut(s) | 33 |
| Bsp143I | GATC | 1 cut(s) | 242 |
| BspCNI | CTCAG | 1 cut(s) | 297 |
| BspPI | GGATC | 1 cut(s) | 250 |
| BspT104I | TTCGAA | 1 cut(s) | 33 |
| BsrI | ACTGG | 1 cut(s) | 315 |
| BssMI | GATC | 1 cut(s) | 242 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| Bst6I | CTCTTC | 1 cut(s) | 309 |
| BstBAI | YACGTR | 1 cut(s) | 7 |
| BstBI | TTCGAA | 1 cut(s) | 33 |
| BstDEI | CTNAG | 1 cut(s) | 284 |
| BstF5I | GGATG | 3 cut(s) | 61, 65, 174 |
| BstKTI | GATC | 1 cut(s) | 245 |
| BstMAI | GTCTC | 2 cut(s) | 129, 168 |
| BstMBI | GATC | 1 cut(s) | 242 |
| BstV1I | GCAGC | 1 cut(s) | 231 |
| BtsCI | GGATG | 3 cut(s) | 61, 65, 174 |
| BtsIMutI | CAGTG | 1 cut(s) | 308 |
| Csp6I | GTAC | 2 cut(s) | 4, 203 |
| CviAII | CATG | 2 cut(s) | 212, 225 |
| CviJI | RGCY | 3 cut(s) | 131, 222, 288 |
| CviKI_1 | RGCY | 3 cut(s) | 131, 222, 288 |
| CviQI | GTAC | 2 cut(s) | 4, 203 |
| DdeI | CTNAG | 1 cut(s) | 284 |
| DpnI | GATC | 1 cut(s) | 244 |
| DpnII | GATC | 1 cut(s) | 242 |
| Eam1104I | CTCTTC | 1 cut(s) | 309 |
| EarI | CTCTTC | 1 cut(s) | 309 |
| Esp3I | CGTCTC | 1 cut(s) | 168 |
| FaeI | CATG | 2 cut(s) | 215, 228 |
| FaiI | YATR | 4 cut(s) | 21, 40, 213, 226 |
| FatI | CATG | 2 cut(s) | 211, 224 |
| Fnu4HI | GCNGC | 1 cut(s) | 220 |
| FokI | GGATG | 3 cut(s) | 52, 68, 181 |
| Fsp4HI | GCNGC | 1 cut(s) | 220 |
| FspBI | CTAG | 1 cut(s) | 132 |
| GluI | GCNGC | 1 cut(s) | 220 |
| Hin1II | CATG | 2 cut(s) | 215, 228 |
| HincII | GTYRAC | 1 cut(s) | 263 |
| HindII | GTYRAC | 1 cut(s) | 263 |
| Hpy166II | GTNNAC | 2 cut(s) | 157, 263 |
| Hpy8I | GTNNAC | 2 cut(s) | 157, 263 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyCH4IV | ACGT | 1 cut(s) | 6 |
| HpyCH4V | TGCA | 1 cut(s) | 219 |
| HpyF3I | CTNAG | 1 cut(s) | 284 |
| HpySE526I | ACGT | 1 cut(s) | 6 |
| Hsp92II | CATG | 2 cut(s) | 215, 228 |
| Kzo9I | GATC | 1 cut(s) | 242 |
| LpnPI | CCDG | 2 cut(s) | 85, 296 |
| Lsp1109I | GCAGC | 1 cut(s) | 231 |
| LweI | GCATC | 2 cut(s) | 46, 159 |
| MaeI | CTAG | 1 cut(s) | 132 |
| MaeII | ACGT | 1 cut(s) | 6 |
| MalI | GATC | 1 cut(s) | 244 |
| MboI | GATC | 1 cut(s) | 242 |
| MboII | GAAGA | 2 cut(s) | 286, 296 |
| MluCI | AATT | 2 cut(s) | 16, 86 |
| MnlI | CCTC | 1 cut(s) | 293 |
| MseI | TTAA | 1 cut(s) | 317 |
| NdeII | GATC | 1 cut(s) | 242 |
| NlaIII | CATG | 2 cut(s) | 215, 228 |
| NspV | TTCGAA | 1 cut(s) | 33 |
| PkrI | GCNGC | 1 cut(s) | 221 |
| Ppu21I | YACGTR | 1 cut(s) | 7 |
| RsaI | GTAC | 2 cut(s) | 5, 204 |
| RsaNI | GTAC | 2 cut(s) | 4, 203 |
| SaqAI | TTAA | 1 cut(s) | 317 |
| SatI | GCNGC | 1 cut(s) | 220 |
| Sau3AI | GATC | 1 cut(s) | 242 |
| SetI | ASST | 5 cut(s) | 9, 26, 224, 262, 285 |
| SfaNI | GCATC | 2 cut(s) | 46, 159 |
| SfuI | TTCGAA | 1 cut(s) | 33 |
| SmlI | CTYRAG | 1 cut(s) | 236 |
| SmoI | CTYRAG | 1 cut(s) | 236 |
| Sse9I | AATT | 2 cut(s) | 16, 86 |
| SspMI | CTAG | 1 cut(s) | 132 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TaiI | ACGT | 1 cut(s) | 9 |
| TaqI | TCGA | 2 cut(s) | 33, 146 |
| TasI | AATT | 2 cut(s) | 16, 86 |
| Tru1I | TTAA | 1 cut(s) | 317 |
| Tru9I | TTAA | 1 cut(s) | 317 |
| TscAI | CASTG | 1 cut(s) | 315 |
| TseI | GCWGC | 1 cut(s) | 219 |
| TspDTI | ATGAA | 1 cut(s) | 200 |
| TspRI | CASTG | 1 cut(s) | 315 |
| XspI | CTAG | 1 cut(s) | 132 |