Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0008174

Physical Location & Seq

Genomic Coordinates Forward (+)

32160829 .. 32165424

Gene Structure 4596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0291900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGGAGGGGAAGTGGTTGCTGATAATGTCGGTGTTGGTGATGGGTTGGTCTGTGACTCTGACATCAGCTTCTTTTGGTGATCGCTATCGGGGAAGGAAATCTTTTCTACCGACGGAAGCGACGTCGTCTTTGGCGTTCAGCCGTGCACCATCGTCCATTGTGTTACCTGTTCATGGAAACGTGTACCCAATTGGGTCATATAATGTTACCTTAAACATTGGTCAGCCTCCAAAGCCCTACTTTCTCGACCCCGACACCGGTAGTGATCTTACATGGCTCCAGTGTGATGCTCCTTGTGTGAGATGTACTGAGGCGCCTCATCCATACTACAGGCCCAACAATGACCTAGTGGTCTGTAATGACCCTCTCTGTGCATCCTTACACGCACCTGGTGCTCACAAATGTGACAATCCAGAGCAATGCGACTATGAAGTTGAGTATGCAGACGGCGGCTCATCTCTTGGTGTACTTGTAAGGGATGCCTTTCACCTCAACTTTACAAATGGAATCCAGCAAATACCTCATCTGGCTCTTGGGTGTGGATATGATCAACTTCCTGGATCATCTTATCATCCCATAGATGGAGTTCTCGGCCTTGGCAAGGGAAAAGCTAGCATCGTCTCACAACTTGCTAGTCAGGGTCTCGTGAGAAATGTCGTTGGTCATTGTTTGAGTTCTCGAGGTGGAGGGTATTTCATCTTTGGGGATGACCTCTATGATTATTCACGAGCAGTTTGGACACCAATGTCACCTGATTACTCCAAACATTACTCACCTGGATTTGCGGAACTGATATTTGATGGGAAGTCTACTGGATTTAGAAACCTATTCATGGTTTTTGACAGTGGGAGTTCTTACACTTACCTCAATTCTCAGGCTTATCATTTTTTAACTTCATGGTTGAAGAGGGAACTAAATGGAAAGCCTCTGAAAGAAGCTCCAGATGACAGGACTCTCCCACTCTGTTGGAAAGGTCGAAAGCCATTTAAGAACATACGTGATGCCAAGAAATACTTCAAGCCCTTAGCACTGAGATTTGCCATTGGAAGAAAGGATGCAGCACAGTTTGAATTGTCCCCTGAAGCTTATCTTATAATATCATCCAAGGGAAATGTTTGCTTGGGAATTCTAAATGGTACTGAAGTTGGCTTACAAAATTCAAACATCATTGGAGACATTTCAATGCAAGATAAGATGGTCATTTATGACAATGACAAACAGATGATTGGATGGACTCCTGGAAACTGTGATCAACTACCCAAGTCTAGAAGCTTCAGCTTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006865 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0015075 GO:0015171 GO:0015175 GO:0015179 GO:0015194 GO:0015318 GO:0015711 GO:0015804 GO:0015807 GO:0015825 GO:0015849 GO:0022857 GO:0022889 GO:0032329 GO:0034220 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098655 GO:0098656 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Serinc

Protein Analysis

428

Amino Acids

47.33

Weight (kDa)

7.1

Isoelectric Point (pI)

38.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	66 - 411	1.5e-14	Eukaryotic aspartyl protease
TAXi_N	PF14543	67 - 236	4.5e-50	Xylanase inhibitor N-terminal
TAXi_C	PF14541	278 - 412	2.1e-16	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008174)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0130961 RchiOBHm_Chr2g0131531 RchiOBHm_Chr2g0131581 RchiOBHm_Chr2g0131861
rosa_laevigata	RLG00000019215 RLG00000019216 RLG00000019217
rosa_multiflora	Rmu_sc0001159.1_g000032
rosa_roxburghii	Rroxscaffold_2G00112510 Rroxscaffold_2G00112560 Rroxscaffold_2G00112570 Rroxscaffold_2G00112790 Rroxscaffold_2G00113420
rosa_rugosa	Rorug02G0291900 Rorug02G0294200 Rorug02G0294300 Rorug02G0300500
rosa_samantha	Rh2BG353800 Rh2BG359700 Rh2BG469300 Rh2DG376800 Rh5CG304700
rosa_wichuraiana	Rw2G028640 Rw2G028710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1094
AasI	GACNNNNNNGTC	2 cut(s)	350, 745
AatII	GACGTC	1 cut(s)	125
AccB1I	GGYRCC	1 cut(s)	313
AccI	GTMKAC	1 cut(s)	809
AciI	CCGC	2 cut(s)	450, 785
AclWI	GGATC	1 cut(s)	568
AcsI	RAATTY	2 cut(s)	1125, 1156
AcuI	CTGAAG	3 cut(s)	1101, 1161, 1258
AcyI	GRCGYC	2 cut(s)	122, 314
AdeI	CACNNNGTG	1 cut(s)	392
AfaI	GTAC	4 cut(s)	185, 307, 468, 1138
AfiI	CCNNNNNNNGG	5 cut(s)	173, 257, 581, 601, 832
AflIII	ACRYGT	1 cut(s)	180
AgeI	ACCGGT	1 cut(s)	257
AgsI	TTSAA	5 cut(s)	904, 1018, 1070, 1161, 1182
AjnI	CCWGG	4 cut(s)	388, 556, 775, 1237
AjuI	GAANNNNNNNTTGG	2 cut(s)	998, 1030
AleI	CACNNNNGTG	1 cut(s)	402
AluBI	AGCT	6 cut(s)	68, 611, 938, 1085, 1272, 1278
AluI	AGCT	6 cut(s)	68, 611, 938, 1085, 1272, 1278
Alw21I	GWGCWC	2 cut(s)	148, 397
Alw26I	GTCTC	3 cut(s)	625, 647, 1167
Alw44I	GTGCAC	1 cut(s)	144
AlwI	GGATC	1 cut(s)	568
AlwNI	CAGNNNCTG	1 cut(s)	1281
Ama87I	CYCGRG	1 cut(s)	678
AoxI	GGCC	2 cut(s)	332, 592
ApaLI	GTGCAC	1 cut(s)	144
ApeKI	GCWGC	1 cut(s)	1058
ApoI	RAATTY	2 cut(s)	1125, 1156
ArsI	GACNNNNNNTTYG	2 cut(s)	112, 144
AsiGI	ACCGGT	1 cut(s)	257
Asp700I	GAANNNNTTC	1 cut(s)	1013
AspLEI	GCGC	1 cut(s)	316
AspS9I	GGNCC	1 cut(s)	333
AsuHPI	GGTGA	5 cut(s)	49, 89, 479, 741, 765
AsuNHI	GCTAGC	1 cut(s)	611
AvaI	CYCGRG	1 cut(s)	678
BaeGI	GKGCMC	1 cut(s)	148
BaeI	ACNNNNGTAYC	2 cut(s)	1128, 1161
BanI	GGYRCC	1 cut(s)	313
BarI	GAAGNNNNNNTAC	2 cut(s)	1134, 1166
BauI	CACGAG	2 cut(s)	644, 726
Bbv12I	GWGCWC	2 cut(s)	148, 397
BbvI	GCAGC	1 cut(s)	1070
BccI	CCATC	6 cut(s)	34, 157, 575, 794, 1189, 1224
BceAI	ACGGC	2 cut(s)	126, 463
BciT130I	CCWGG	4 cut(s)	390, 558, 777, 1239
BclI	TGATCA	2 cut(s)	547, 1249
BcoDI	GTCTC	3 cut(s)	625, 647, 1167
BfaI	CTAG	4 cut(s)	347, 612, 633, 1266
BfmI	CTRYAG	1 cut(s)	328
BfoI	RGCGCY	1 cut(s)	317
BisI	GCNGC	2 cut(s)	451, 1059
BlsI	GCNGC	2 cut(s)	452, 1060
Bme1390I	CCNGG	4 cut(s)	390, 558, 777, 1239
BmeT110I	CYCGRG	1 cut(s)	678
BmgT120I	GGNCC	1 cut(s)	333
BmiI	GGNNCC	2 cut(s)	278, 315
BmrFI	CCNGG	4 cut(s)	390, 558, 777, 1239
BmsI	GCATC	6 cut(s)	277, 383, 469, 624, 991, 1045
BmtI	GCTAGC	1 cut(s)	615
BpmI	CTGGAG	2 cut(s)	263, 924
Bpu10I	CCTNAGC	1 cut(s)	1024
BsaAI	YACGTR	1 cut(s)	998
BsaBI	GATNNNNATC	1 cut(s)	84
BsaHI	GRCGYC	2 cut(s)	122, 314
BsaI	GGTCTC	1 cut(s)	647
BsaJI	CCNNGG	2 cut(s)	595, 1104
BsaWI	WCCGGW	1 cut(s)	257
BsaXI	ACNNNNNCTCC	1 cut(s)	26
Bsc4I	CCNNNNNNNGG	5 cut(s)	173, 257, 581, 601, 832
Bse118I	RCCGGY	1 cut(s)	257
Bse1I	ACTGG	2 cut(s)	280, 817
Bse3DI	GCAATG	1 cut(s)	425
Bse8I	GATNNNNATC	1 cut(s)	84
BseBI	CCWGG	4 cut(s)	390, 558, 777, 1239
BseDI	CCNNGG	2 cut(s)	595, 1104
BseGI	GGATG	8 cut(s)	319, 374, 484, 571, 712, 1060, 1100, 1235
BseJI	GATNNNNATC	1 cut(s)	84
BseLI	CCNNNNNNNGG	5 cut(s)	173, 257, 581, 601, 832
BseMI	GCAATG	1 cut(s)	425
BseMII	CTCAG	3 cut(s)	300, 887, 1022
BseNI	ACTGG	2 cut(s)	280, 817
BseSI	GKGCMC	1 cut(s)	148
BseXI	GCAGC	1 cut(s)	1070
BshFI	GGCC	2 cut(s)	334, 594
BshNI	GGYRCC	1 cut(s)	313
BshTI	ACCGGT	1 cut(s)	257
BsiHKAI	GWGCWC	2 cut(s)	148, 397
BsiHKCI	CYCGRG	1 cut(s)	678
BsiSI	CCGG	1 cut(s)	258
BslFI	GGGAC	1 cut(s)	1060
BslI	CCNNNNNNNGG	5 cut(s)	173, 257, 581, 601, 832
BsmAI	GTCTC	3 cut(s)	625, 647, 1167
BsmBI	CGTCTC	1 cut(s)	625
BsmFI	GGGAC	1 cut(s)	1060
BsnI	GGCC	2 cut(s)	334, 594
Bso31I	GGTCTC	1 cut(s)	647
BsoBI	CYCGRG	1 cut(s)	678
Bsp1286I	GDGCHC	2 cut(s)	148, 397
Bsp143I	GATC	5 cut(s)	79, 265, 547, 560, 1249
BspACI	CCGC	2 cut(s)	450, 785
BspANI	GGCC	2 cut(s)	334, 594
BspCNI	CTCAG	3 cut(s)	301, 886, 1023
BspLI	GGNNCC	2 cut(s)	278, 315
BspOI	GCTAGC	1 cut(s)	615
BspPI	GGATC	1 cut(s)	568
BspT107I	GGYRCC	1 cut(s)	313
BspTNI	GGTCTC	1 cut(s)	647
BsrDI	GCAATG	1 cut(s)	425
BsrFI	RCCGGY	1 cut(s)	257
BsrI	ACTGG	2 cut(s)	280, 817
BssAI	RCCGGY	1 cut(s)	257
BssECI	CCNNGG	2 cut(s)	595, 1104
BssMI	GATC	5 cut(s)	79, 265, 547, 560, 1249
BssNI	GRCGYC	2 cut(s)	122, 314
BssSI	CACGAG	2 cut(s)	644, 726
BssT1I	CCWWGG	2 cut(s)	595, 1104
Bst2BI	CACGAG	2 cut(s)	644, 726
Bst2UI	CCWGG	4 cut(s)	390, 558, 777, 1239
Bst4CI	ACNGT	3 cut(s)	845, 1065, 1247
Bst6I	CTCTTC	1 cut(s)	899
BstACI	GRCGYC	2 cut(s)	122, 314
BstAPI	GCANNNNNTGC	1 cut(s)	392
BstBAI	YACGTR	1 cut(s)	998
BstC8I	GCNNGC	1 cut(s)	613
BstDEI	CTNAG	4 cut(s)	309, 873, 1024, 1031
BstENI	CCTNNNNNAGG	1 cut(s)	599
BstF5I	GGATG	8 cut(s)	319, 374, 484, 571, 712, 1060, 1100, 1235
BstH2I	RGCGCY	1 cut(s)	317
BstHHI	GCGC	1 cut(s)	316
BstKTI	GATC	5 cut(s)	82, 268, 550, 563, 1252
BstMAI	GTCTC	3 cut(s)	625, 647, 1167
BstMBI	GATC	5 cut(s)	79, 265, 547, 560, 1249
BstMWI	GCNNNNNNNGC	2 cut(s)	232, 392
BstNI	CCWGG	4 cut(s)	390, 558, 777, 1239
BstSCI	CCNGG	4 cut(s)	388, 556, 775, 1237
BstSFI	CTRYAG	1 cut(s)	328
BstSLI	GKGCMC	1 cut(s)	148
BstV1I	GCAGC	1 cut(s)	1070
BstXI	CCANNNNNNTGG	1 cut(s)	966
BsuRI	GGCC	2 cut(s)	334, 594
BtsCI	GGATG	8 cut(s)	319, 374, 484, 571, 712, 1060, 1100, 1235
BtsIMutI	CAGTG	3 cut(s)	287, 850, 1028
Cac8I	GCNNGC	1 cut(s)	613
CaiI	CAGNNNCTG	1 cut(s)	1281
CfoI	GCGC	1 cut(s)	316
Cfr10I	RCCGGY	1 cut(s)	257
Cfr13I	GGNCC	1 cut(s)	333
CsiI	ACCWGGT	1 cut(s)	388
Csp6I	GTAC	4 cut(s)	184, 306, 467, 1137
CspAI	ACCGGT	1 cut(s)	257
CviAII	CATG	4 cut(s)	173, 273, 832, 897
CviQI	GTAC	4 cut(s)	184, 306, 467, 1137
DdeI	CTNAG	4 cut(s)	309, 873, 1024, 1031
DinI	GGCGCC	1 cut(s)	315
DpnI	GATC	5 cut(s)	81, 267, 549, 562, 1251
DpnII	GATC	5 cut(s)	79, 265, 547, 560, 1249
DraIII	CACNNNGTG	1 cut(s)	392
DrdI	GACNNNNNNGTC	2 cut(s)	350, 745
DseDI	GACNNNNNNGTC	2 cut(s)	350, 745
Eam1104I	CTCTTC	1 cut(s)	899
EarI	CTCTTC	1 cut(s)	899
Eco130I	CCWWGG	2 cut(s)	595, 1104
Eco31I	GGTCTC	1 cut(s)	647
Eco57I	CTGAAG	3 cut(s)	1101, 1161, 1258
Eco88I	CYCGRG	1 cut(s)	678
EcoNI	CCTNNNNNAGG	1 cut(s)	599
EcoRI	GAATTC	1 cut(s)	1125
EcoRII	CCWGG	4 cut(s)	388, 556, 775, 1237
EcoT14I	CCWWGG	2 cut(s)	595, 1104
EgeI	GGCGCC	1 cut(s)	315
EheI	GGCGCC	1 cut(s)	315
ErhI	CCWWGG	2 cut(s)	595, 1104
Esp3I	CGTCTC	1 cut(s)	625
FaeI	CATG	4 cut(s)	176, 276, 835, 900
FalI	AAGNNNNNCTT	8 cut(s)	85, 117, 224, 256, 998, 1030, 1074, 1106
FaqI	GGGAC	1 cut(s)	1060
FatI	CATG	4 cut(s)	172, 272, 831, 896
FbaI	TGATCA	2 cut(s)	547, 1249
FblI	GTMKAC	1 cut(s)	809
Fnu4HI	GCNGC	2 cut(s)	451, 1059
FokI	GGATG	8 cut(s)	306, 361, 491, 558, 719, 1067, 1087, 1242
Fsp4HI	GCNGC	2 cut(s)	451, 1059
FspBI	CTAG	4 cut(s)	347, 612, 633, 1266
GlaI	GCGC	1 cut(s)	315
GluI	GCNGC	2 cut(s)	451, 1059
GsuI	CTGGAG	2 cut(s)	263, 924
HaeII	RGCGCY	1 cut(s)	317
HaeIII	GGCC	2 cut(s)	334, 594
HapII	CCGG	1 cut(s)	258
HhaI	GCGC	1 cut(s)	316
Hin1I	GRCGYC	2 cut(s)	122, 314
Hin1II	CATG	4 cut(s)	176, 276, 835, 900
Hin6I	GCGC	1 cut(s)	314
HinP1I	GCGC	1 cut(s)	314
HindIII	AAGCTT	2 cut(s)	1083, 1270
HinfI	GANTC	4 cut(s)	55, 507, 952, 1234
HpaII	CCGG	1 cut(s)	258
HphI	GGTGA	5 cut(s)	49, 89, 479, 741, 765
Hpy166II	GTNNAC	4 cut(s)	146, 184, 467, 810
Hpy188I	TCNGA	2 cut(s)	60, 930
Hpy188III	TCNNGA	7 cut(s)	245, 413, 646, 678, 726, 941, 1266
Hpy8I	GTNNAC	4 cut(s)	146, 184, 467, 810
Hpy99I	CGWCG	3 cut(s)	115, 124, 127
HpyAV	CCTTC	1 cut(s)	87
HpyCH4III	ACNGT	3 cut(s)	845, 1065, 1247
HpyCH4IV	ACGT	3 cut(s)	122, 180, 997
HpyCH4V	TGCA	5 cut(s)	146, 374, 443, 1058, 1186
HpyF10VI	GCNNNNNNNGC	2 cut(s)	232, 392
HpyF3I	CTNAG	4 cut(s)	309, 873, 1024, 1031
HpySE526I	ACGT	3 cut(s)	122, 180, 997
Hsp92I	GRCGYC	2 cut(s)	122, 314
Hsp92II	CATG	4 cut(s)	176, 276, 835, 900
HspAI	GCGC	1 cut(s)	314
KasI	GGCGCC	1 cut(s)	313
Ksp22I	TGATCA	2 cut(s)	547, 1249
Kzo9I	GATC	5 cut(s)	79, 265, 547, 560, 1249
LmnI	GCTCC	3 cut(s)	282, 295, 943
Lsp1109I	GCAGC	1 cut(s)	1070
LweI	GCATC	6 cut(s)	277, 383, 469, 624, 991, 1045
MabI	ACCWGGT	1 cut(s)	388
MaeI	CTAG	4 cut(s)	347, 612, 633, 1266
MaeII	ACGT	3 cut(s)	122, 180, 997
MaeIII	GTNAC	5 cut(s)	52, 162, 205, 404, 747
MalI	GATC	5 cut(s)	81, 267, 549, 562, 1251
MboI	GATC	5 cut(s)	79, 265, 547, 560, 1249
MboII	GAAGA	2 cut(s)	916, 1059
MfeI	CAATTG	1 cut(s)	189
MhlI	GDGCHC	2 cut(s)	148, 397
MluCI	AATT	5 cut(s)	189, 868, 1070, 1125, 1156
Mly113I	GGCGCC	1 cut(s)	314
MlyI	GAGTC	3 cut(s)	49, 946, 1228
MmeI	TCCRAC	1 cut(s)	947
MroXI	GAANNNNTTC	1 cut(s)	1013
MseI	TTAA	3 cut(s)	212, 890, 987
MslI	CAYNNNNRTG	2 cut(s)	402, 1181
MspI	CCGG	1 cut(s)	258
MspR9I	CCNGG	4 cut(s)	390, 558, 777, 1239
MunI	CAATTG	1 cut(s)	189
MvaI	CCWGG	4 cut(s)	390, 558, 777, 1239
MwoI	GCNNNNNNNGC	2 cut(s)	232, 392
NarI	GGCGCC	1 cut(s)	314
NdeII	GATC	5 cut(s)	79, 265, 547, 560, 1249
NheI	GCTAGC	1 cut(s)	611
NlaIII	CATG	4 cut(s)	176, 276, 835, 900
NlaIV	GGNNCC	2 cut(s)	278, 315
NmeAIII	GCCGAG	1 cut(s)	570
NmuCI	GTSAC	3 cut(s)	52, 404, 747
OliI	CACNNNNGTG	1 cut(s)	402
PaeR7I	CTCGAG	1 cut(s)	678
PcsI	WCGNNNNNNNCGW	2 cut(s)	119, 131
PdmI	GAANNNNTTC	1 cut(s)	1013
PfeI	GAWTC	1 cut(s)	507
PflFI	GACNNNGTC	1 cut(s)	124
PfoI	TCCNGGA	2 cut(s)	556, 1237
PinAI	ACCGGT	1 cut(s)	257
PkrI	GCNGC	2 cut(s)	452, 1060
PleI	GAGTC	3 cut(s)	49, 946, 1228
PluTI	GGCGCC	1 cut(s)	317
PpsI	GAGTC	3 cut(s)	49, 946, 1228
Ppu21I	YACGTR	1 cut(s)	998
PsiI	TTATAA	1 cut(s)	1094
Psp6I	CCWGG	4 cut(s)	388, 556, 775, 1237
PspGI	CCWGG	4 cut(s)	388, 556, 775, 1237
PspN4I	GGNNCC	2 cut(s)	278, 315
PspPI	GGNCC	1 cut(s)	333
PstNI	CAGNNNCTG	1 cut(s)	1281
PsyI	GACNNNGTC	1 cut(s)	124
RsaI	GTAC	4 cut(s)	185, 307, 468, 1138
RsaNI	GTAC	4 cut(s)	184, 306, 467, 1137
RseI	CAYNNNNRTG	2 cut(s)	402, 1181
SaqAI	TTAA	3 cut(s)	212, 890, 987
SatI	GCNGC	2 cut(s)	451, 1059
Sau3AI	GATC	5 cut(s)	79, 265, 547, 560, 1249
Sau96I	GGNCC	1 cut(s)	333
SchI	GAGTC	3 cut(s)	49, 946, 1228
ScrFI	CCNGG	4 cut(s)	390, 558, 777, 1239
SduI	GDGCHC	2 cut(s)	148, 397
SexAI	ACCWGGT	1 cut(s)	388
SfaNI	GCATC	6 cut(s)	277, 383, 469, 624, 991, 1045
SfcI	CTRYAG	1 cut(s)	328
SfoI	GGCGCC	1 cut(s)	315
Sfr274I	CTCGAG	1 cut(s)	678
SlaI	CTCGAG	1 cut(s)	678
SmiMI	CAYNNNNRTG	2 cut(s)	402, 1181
SmlI	CTYRAG	1 cut(s)	678
SmoI	CTYRAG	1 cut(s)	678
Sse9I	AATT	5 cut(s)	189, 868, 1070, 1125, 1156
SsiI	CCGC	2 cut(s)	450, 785
SspDI	GGCGCC	1 cut(s)	313
SspMI	CTAG	4 cut(s)	347, 612, 633, 1266
StyD4I	CCNGG	4 cut(s)	388, 556, 775, 1237
StyI	CCWWGG	2 cut(s)	595, 1104
TaaI	ACNGT	3 cut(s)	845, 1065, 1247
TaiI	ACGT	3 cut(s)	125, 183, 1000
TaqI	TCGA	3 cut(s)	246, 679, 976
TasI	AATT	5 cut(s)	189, 868, 1070, 1125, 1156
TatI	WGTACW	2 cut(s)	305, 466
TauI	GCSGC	1 cut(s)	453
TfiI	GAWTC	1 cut(s)	507
Tru1I	TTAA	3 cut(s)	212, 890, 987
Tru9I	TTAA	3 cut(s)	212, 890, 987
TscAI	CASTG	3 cut(s)	287, 850, 1035
TseFI	GTSAC	3 cut(s)	52, 404, 747
TseI	GCWGC	1 cut(s)	1058
Tsp45I	GTSAC	3 cut(s)	52, 404, 747
TspDTI	ATGAA	5 cut(s)	161, 444, 685, 820, 885
TspGWI	ACGGA	1 cut(s)	128
TspRI	CASTG	3 cut(s)	287, 850, 1035
Tth111I	GACNNNGTC	1 cut(s)	124
VneI	GTGCAC	1 cut(s)	144
XagI	CCTNNNNNAGG	1 cut(s)	599
XapI	RAATTY	2 cut(s)	1125, 1156
XbaI	TCTAGA	1 cut(s)	1265
XhoI	CTCGAG	1 cut(s)	678
XmiI	GTMKAC	1 cut(s)	809
XmnI	GAANNNNTTC	1 cut(s)	1013
XspI	CTAG	4 cut(s)	347, 612, 633, 1266
ZraI	GACGTC	1 cut(s)	123

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.