No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0130961 RchiOBHm_Chr2g0131531 RchiOBHm_Chr2g0131581 RchiOBHm_Chr2g0131861 |
| rosa_laevigata | RLG00000019215 RLG00000019216 RLG00000019217 |
| rosa_multiflora | Rmu_sc0001159.1_g000032 |
| rosa_roxburghii | Rroxscaffold_2G00112510 Rroxscaffold_2G00112560 Rroxscaffold_2G00112570 Rroxscaffold_2G00112790 Rroxscaffold_2G00113420 |
| rosa_rugosa | Rorug02G0291900 Rorug02G0294200 Rorug02G0294300 Rorug02G0300500 |
| rosa_samantha | Rh2BG353800 Rh2BG359700 Rh2BG469300 Rh2DG376800 Rh5CG304700 |
| rosa_wichuraiana | Rw2G028640 Rw2G028710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 76 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 146 |
| AgsI | TTSAA | 1 cut(s) | 167 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 121 |
| AluBI | AGCT | 3 cut(s) | 24, 38, 65 |
| AluI | AGCT | 3 cut(s) | 24, 38, 65 |
| AoxI | GGCC | 1 cut(s) | 214 |
| ApeKI | GCWGC | 1 cut(s) | 31 |
| AspS9I | GGNCC | 1 cut(s) | 215 |
| AsuC2I | CCSGG | 1 cut(s) | 101 |
| BbvI | GCAGC | 1 cut(s) | 18 |
| BcnI | CCSGG | 1 cut(s) | 101 |
| BfmI | CTRYAG | 1 cut(s) | 25 |
| BisI | GCNGC | 1 cut(s) | 32 |
| BlsI | GCNGC | 1 cut(s) | 33 |
| Bme1390I | CCNGG | 1 cut(s) | 101 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 121 |
| BmgT120I | GGNCC | 1 cut(s) | 215 |
| BmrFI | CCNGG | 1 cut(s) | 101 |
| BpuMI | CCSGG | 1 cut(s) | 101 |
| BsaAI | YACGTR | 1 cut(s) | 74 |
| BsaJI | CCNNGG | 1 cut(s) | 100 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 146 |
| Bse1I | ACTGG | 1 cut(s) | 217 |
| Bse3DI | GCAATG | 2 cut(s) | 152, 198 |
| BseDI | CCNNGG | 1 cut(s) | 100 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 146 |
| BseMI | GCAATG | 2 cut(s) | 152, 198 |
| BseNI | ACTGG | 1 cut(s) | 217 |
| BseXI | GCAGC | 1 cut(s) | 18 |
| BshFI | GGCC | 1 cut(s) | 216 |
| BsiSI | CCGG | 2 cut(s) | 92, 100 |
| BslFI | GGGAC | 1 cut(s) | 163 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 146 |
| BsmFI | GGGAC | 1 cut(s) | 163 |
| BsnI | GGCC | 1 cut(s) | 216 |
| BspANI | GGCC | 1 cut(s) | 216 |
| BsrDI | GCAATG | 2 cut(s) | 152, 198 |
| BsrI | ACTGG | 1 cut(s) | 217 |
| BssECI | CCNNGG | 1 cut(s) | 100 |
| BstBAI | YACGTR | 1 cut(s) | 74 |
| BstC8I | GCNNGC | 1 cut(s) | 36 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 144 |
| BstSCI | CCNGG | 1 cut(s) | 99 |
| BstSFI | CTRYAG | 1 cut(s) | 25 |
| BstSNI | TACGTA | 1 cut(s) | 74 |
| BstV1I | GCAGC | 1 cut(s) | 18 |
| BsuRI | GGCC | 1 cut(s) | 216 |
| BtsI | GCAGTG | 1 cut(s) | 86 |
| BtsIMutI | CAGTG | 1 cut(s) | 86 |
| Cac8I | GCNNGC | 1 cut(s) | 36 |
| Cfr13I | GGNCC | 1 cut(s) | 215 |
| Csp6I | GTAC | 1 cut(s) | 75 |
| CviAII | CATG | 1 cut(s) | 118 |
| CviJI | RGCY | 5 cut(s) | 24, 31, 38, 65, 216 |
| CviKI_1 | RGCY | 5 cut(s) | 24, 31, 38, 65, 216 |
| CviQI | GTAC | 1 cut(s) | 75 |
| DriI | GACNNNNNGTC | 1 cut(s) | 121 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 121 |
| Eco105I | TACGTA | 1 cut(s) | 74 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 144 |
| FaeI | CATG | 1 cut(s) | 121 |
| FaiI | YATR | 3 cut(s) | 71, 119, 206 |
| FaqI | GGGAC | 1 cut(s) | 163 |
| FatI | CATG | 1 cut(s) | 117 |
| Fnu4HI | GCNGC | 1 cut(s) | 32 |
| Fsp4HI | GCNGC | 1 cut(s) | 32 |
| GluI | GCNGC | 1 cut(s) | 32 |
| HaeIII | GGCC | 1 cut(s) | 216 |
| HapII | CCGG | 2 cut(s) | 92, 100 |
| Hin1II | CATG | 1 cut(s) | 121 |
| HpaII | CCGG | 2 cut(s) | 92, 100 |
| HpyCH4IV | ACGT | 1 cut(s) | 73 |
| HpyCH4V | TGCA | 1 cut(s) | 12 |
| HpySE526I | ACGT | 1 cut(s) | 73 |
| Hsp92II | CATG | 1 cut(s) | 121 |
| LpnPI | CCDG | 3 cut(s) | 105, 113, 198 |
| Lsp1109I | GCAGC | 1 cut(s) | 18 |
| MaeII | ACGT | 1 cut(s) | 73 |
| MaeIII | GTNAC | 2 cut(s) | 106, 123 |
| MboII | GAAGA | 1 cut(s) | 39 |
| MmeI | TCCRAC | 1 cut(s) | 153 |
| MnlI | CCTC | 2 cut(s) | 114, 150 |
| MspI | CCGG | 2 cut(s) | 92, 100 |
| MspR9I | CCNGG | 1 cut(s) | 101 |
| NciI | CCSGG | 1 cut(s) | 101 |
| NlaIII | CATG | 1 cut(s) | 121 |
| NmuCI | GTSAC | 1 cut(s) | 123 |
| PkrI | GCNGC | 1 cut(s) | 33 |
| Ppu21I | YACGTR | 1 cut(s) | 74 |
| PspPI | GGNCC | 1 cut(s) | 215 |
| RsaI | GTAC | 1 cut(s) | 76 |
| RsaNI | GTAC | 1 cut(s) | 75 |
| SatI | GCNGC | 1 cut(s) | 32 |
| Sau96I | GGNCC | 1 cut(s) | 215 |
| ScrFI | CCNGG | 1 cut(s) | 101 |
| SetI | ASST | 7 cut(s) | 26, 40, 67, 76, 125, 142, 186 |
| SfcI | CTRYAG | 1 cut(s) | 25 |
| SgeI | CNNG | 9 cut(s) | 33, 47, 104, 112, 113, 125, 130, 140, 176 |
| SnaBI | TACGTA | 1 cut(s) | 74 |
| StyD4I | CCNGG | 1 cut(s) | 99 |
| TaiI | ACGT | 1 cut(s) | 76 |
| TscAI | CASTG | 1 cut(s) | 93 |
| TseFI | GTSAC | 1 cut(s) | 123 |
| TseI | GCWGC | 1 cut(s) | 31 |
| Tsp45I | GTSAC | 1 cut(s) | 123 |
| TspRI | CASTG | 1 cut(s) | 93 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 144 |