TBC1 domain family member
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07890 AT3G07890 AT3G07890 AT3G07890 AT3G07890 |
| fragaria_vesca | FvH4_6g41560 |
| malus_domestica | MD09G1118900.v1.1 MD17G1109700.v1.1 |
| prunus_persica | Prupe.3G205400_v2.0.a1 Prupe.3G205400_v2.0.a1 |
| pyrus_communis | pycom09g04380 pycom17g10190 pycom17g10200 |
| rosa_chinensis | RchiOBHm_Chr2g0094461 RchiOBHm_Chr2g0157241 |
| rosa_laevigata | RLG00000020974 |
| rosa_multiflora | Rmu_co8061220.1_g000001 Rmu_co8315133.1_g000001 Rmu_sc0006282.1_g000005 Rmu_sc0038099.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092380 |
| rosa_rugosa | Rorug02G0459000 Rorug02G0459100 |
| rosa_samantha | Rh2AG092200 Rh2AG092300 Rh2AG524100 Rh2BG092500 Rh2BG538500 Rh2CG095000 Rh2CG508900 Rh2DG091300 Rh2DG547400 Rh7AG484800 |
| rosa_wichuraiana | Rw2G043350 Rw2G043410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 469 |
| AatII | GACGTC | 1 cut(s) | 153 |
| Acc36I | ACCTGC | 2 cut(s) | 469, 495 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 366, 834 |
| AccII | CGCG | 1 cut(s) | 552 |
| AciI | CCGC | 2 cut(s) | 387, 785 |
| AclWI | GGATC | 1 cut(s) | 1028 |
| AcoI | YGGCCR | 1 cut(s) | 300 |
| AcsI | RAATTY | 1 cut(s) | 1162 |
| AcuI | CTGAAG | 1 cut(s) | 852 |
| AcyI | GRCGYC | 1 cut(s) | 150 |
| AdeI | CACNNNGTG | 1 cut(s) | 834 |
| AfaI | GTAC | 2 cut(s) | 239, 496 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 225, 361, 366, 517, 580, 834, 1174 |
| AflII | CTTAAG | 1 cut(s) | 272 |
| AgsI | TTSAA | 4 cut(s) | 38, 163, 751, 1154 |
| AjnI | CCWGG | 3 cut(s) | 108, 502, 678 |
| AluBI | AGCT | 7 cut(s) | 28, 47, 417, 671, 861, 1045, 1138 |
| AluI | AGCT | 7 cut(s) | 28, 47, 417, 671, 861, 1045, 1138 |
| Alw21I | GWGCWC | 1 cut(s) | 354 |
| Alw26I | GTCTC | 1 cut(s) | 866 |
| AlwI | GGATC | 1 cut(s) | 1028 |
| AoxI | GGCC | 9 cut(s) | 65, 87, 216, 228, 262, 300, 356, 384, 912 |
| ApeKI | GCWGC | 3 cut(s) | 187, 539, 617 |
| ApoI | RAATTY | 1 cut(s) | 1162 |
| AseI | ATTAAT | 1 cut(s) | 999 |
| AspS9I | GGNCC | 6 cut(s) | 87, 112, 228, 357, 384, 912 |
| AsuC2I | CCSGG | 3 cut(s) | 82, 347, 382 |
| AsuHPI | GGTGA | 4 cut(s) | 88, 181, 193, 500 |
| AsuNHI | GCTAGC | 1 cut(s) | 667 |
| AvaII | GGWCC | 1 cut(s) | 112 |
| BalI | TGGCCA | 1 cut(s) | 302 |
| Bbv12I | GWGCWC | 1 cut(s) | 354 |
| BbvI | GCAGC | 3 cut(s) | 199, 526, 629 |
| BccI | CCATC | 1 cut(s) | 987 |
| BceAI | ACGGC | 1 cut(s) | 425 |
| BciT130I | CCWGG | 3 cut(s) | 110, 504, 680 |
| BciVI | GTATCC | 1 cut(s) | 826 |
| BclI | TGATCA | 3 cut(s) | 478, 1063, 1141 |
| BcnI | CCSGG | 3 cut(s) | 82, 347, 382 |
| BcoDI | GTCTC | 1 cut(s) | 866 |
| BfaI | CTAG | 4 cut(s) | 44, 468, 668, 1222 |
| BfmI | CTRYAG | 1 cut(s) | 1007 |
| BfrI | CTTAAG | 1 cut(s) | 272 |
| BfuAI | ACCTGC | 2 cut(s) | 469, 495 |
| BfuI | GTATCC | 1 cut(s) | 826 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 86 |
| BisI | GCNGC | 5 cut(s) | 188, 387, 540, 618, 786 |
| BlsI | GCNGC | 5 cut(s) | 189, 388, 541, 619, 787 |
| Bme1390I | CCNGG | 6 cut(s) | 82, 110, 347, 382, 504, 680 |
| Bme18I | GGWCC | 1 cut(s) | 112 |
| BmgT120I | GGNCC | 6 cut(s) | 87, 112, 228, 357, 384, 912 |
| BmiI | GGNNCC | 4 cut(s) | 10, 229, 385, 913 |
| BmrFI | CCNGG | 6 cut(s) | 82, 110, 347, 382, 504, 680 |
| BmsI | GCATC | 4 cut(s) | 81, 643, 654, 716 |
| BmtI | GCTAGC | 1 cut(s) | 671 |
| BpuEI | CTTGAG | 2 cut(s) | 82, 302 |
| BpuMI | CCSGG | 3 cut(s) | 82, 347, 382 |
| BsaHI | GRCGYC | 1 cut(s) | 150 |
| BsaJI | CCNNGG | 7 cut(s) | 345, 360, 381, 441, 502, 512, 776 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 225, 361, 366, 517, 580, 834, 1174 |
| Bse118I | RCCGGY | 1 cut(s) | 1120 |
| Bse3DI | GCAATG | 1 cut(s) | 435 |
| BseBI | CCWGG | 3 cut(s) | 110, 504, 680 |
| BseDI | CCNNGG | 7 cut(s) | 345, 360, 381, 441, 502, 512, 776 |
| BseGI | GGATG | 5 cut(s) | 72, 589, 669, 731, 898 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 225, 361, 366, 517, 580, 834, 1174 |
| BseMI | GCAATG | 1 cut(s) | 435 |
| BseXI | GCAGC | 3 cut(s) | 199, 526, 629 |
| Bsh1236I | CGCG | 1 cut(s) | 552 |
| BshFI | GGCC | 9 cut(s) | 67, 89, 218, 230, 264, 302, 358, 386, 914 |
| BsiHKAI | GWGCWC | 1 cut(s) | 354 |
| BsiSI | CCGG | 6 cut(s) | 82, 347, 355, 381, 410, 1121 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 225, 361, 366, 517, 580, 834, 1174 |
| BsmAI | GTCTC | 1 cut(s) | 866 |
| BsnI | GGCC | 9 cut(s) | 67, 89, 218, 230, 264, 302, 358, 386, 914 |
| Bsp1286I | GDGCHC | 1 cut(s) | 354 |
| Bsp143I | GATC | 4 cut(s) | 478, 1033, 1063, 1141 |
| Bsp19I | CCATGG | 1 cut(s) | 512 |
| BspACI | CCGC | 2 cut(s) | 387, 785 |
| BspANI | GGCC | 9 cut(s) | 67, 89, 218, 230, 264, 302, 358, 386, 914 |
| BspFNI | CGCG | 1 cut(s) | 552 |
| BspHI | TCATGA | 1 cut(s) | 481 |
| BspLI | GGNNCC | 4 cut(s) | 10, 229, 385, 913 |
| BspMAI | CTGCAG | 1 cut(s) | 1011 |
| BspMI | ACCTGC | 2 cut(s) | 469, 495 |
| BspOI | GCTAGC | 1 cut(s) | 671 |
| BspPI | GGATC | 1 cut(s) | 1028 |
| BspQI | GCTCTTC | 1 cut(s) | 549 |
| BspTI | CTTAAG | 1 cut(s) | 272 |
| BsrDI | GCAATG | 1 cut(s) | 435 |
| BsrFI | RCCGGY | 1 cut(s) | 1120 |
| BssAI | RCCGGY | 1 cut(s) | 1120 |
| BssECI | CCNNGG | 7 cut(s) | 345, 360, 381, 441, 502, 512, 776 |
| BssMI | GATC | 4 cut(s) | 478, 1033, 1063, 1141 |
| BssNI | GRCGYC | 1 cut(s) | 150 |
| BssT1I | CCWWGG | 3 cut(s) | 360, 512, 776 |
| Bst2UI | CCWGG | 3 cut(s) | 110, 504, 680 |
| Bst4CI | ACNGT | 7 cut(s) | 100, 130, 406, 624, 704, 1054, 1158 |
| Bst6I | CTCTTC | 2 cut(s) | 549, 1173 |
| BstACI | GRCGYC | 1 cut(s) | 150 |
| BstAFI | CTTAAG | 1 cut(s) | 272 |
| BstC8I | GCNNGC | 2 cut(s) | 669, 863 |
| BstDEI | CTNAG | 2 cut(s) | 855, 881 |
| BstDSI | CCRYGG | 2 cut(s) | 441, 512 |
| BstEII | GGTNACC | 1 cut(s) | 506 |
| BstF5I | GGATG | 5 cut(s) | 72, 589, 669, 731, 898 |
| BstFNI | CGCG | 1 cut(s) | 552 |
| BstKTI | GATC | 4 cut(s) | 481, 1036, 1066, 1144 |
| BstMAI | GTCTC | 1 cut(s) | 866 |
| BstMBI | GATC | 4 cut(s) | 478, 1033, 1063, 1141 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 86 |
| BstNI | CCWGG | 3 cut(s) | 110, 504, 680 |
| BstNSI | RCATGY | 1 cut(s) | 539 |
| BstPI | GGTNACC | 1 cut(s) | 506 |
| BstSCI | CCNGG | 6 cut(s) | 80, 108, 345, 380, 502, 678 |
| BstSFI | CTRYAG | 1 cut(s) | 1007 |
| BstUI | CGCG | 1 cut(s) | 552 |
| BstV1I | GCAGC | 3 cut(s) | 199, 526, 629 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 442, 986 |
| BsuI | GTATCC | 1 cut(s) | 826 |
| BsuRI | GGCC | 9 cut(s) | 67, 89, 218, 230, 264, 302, 358, 386, 914 |
| BtgI | CCRYGG | 2 cut(s) | 441, 512 |
| BtgZI | GCGATG | 1 cut(s) | 1005 |
| BtsCI | GGATG | 5 cut(s) | 72, 589, 669, 731, 898 |
| BtsI | GCAGTG | 1 cut(s) | 1131 |
| BtsIMutI | CAGTG | 2 cut(s) | 620, 1131 |
| BveI | ACCTGC | 2 cut(s) | 469, 495 |
| Cac8I | GCNNGC | 2 cut(s) | 669, 863 |
| CciI | TCATGA | 1 cut(s) | 481 |
| Cfr10I | RCCGGY | 1 cut(s) | 1120 |
| Cfr13I | GGNCC | 6 cut(s) | 87, 112, 228, 357, 384, 912 |
| Csp6I | GTAC | 2 cut(s) | 238, 495 |
| CviAII | CATG | 7 cut(s) | 77, 482, 513, 536, 731, 929, 983 |
| CviQI | GTAC | 2 cut(s) | 238, 495 |
| DdeI | CTNAG | 2 cut(s) | 855, 881 |
| DpnI | GATC | 4 cut(s) | 480, 1035, 1065, 1143 |
| DpnII | GATC | 4 cut(s) | 478, 1033, 1063, 1141 |
| DraIII | CACNNNGTG | 1 cut(s) | 834 |
| EaeI | YGGCCR | 1 cut(s) | 300 |
| Eam1104I | CTCTTC | 2 cut(s) | 549, 1173 |
| EarI | CTCTTC | 2 cut(s) | 549, 1173 |
| Eco130I | CCWWGG | 3 cut(s) | 360, 512, 776 |
| Eco47I | GGWCC | 1 cut(s) | 112 |
| Eco57I | CTGAAG | 1 cut(s) | 852 |
| Eco91I | GGTNACC | 1 cut(s) | 506 |
| EcoO109I | RGGNCCY | 1 cut(s) | 112 |
| EcoO65I | GGTNACC | 1 cut(s) | 506 |
| EcoRII | CCWGG | 3 cut(s) | 108, 502, 678 |
| EcoT14I | CCWWGG | 3 cut(s) | 360, 512, 776 |
| EcoT22I | ATGCAT | 1 cut(s) | 658 |
| ErhI | CCWWGG | 3 cut(s) | 360, 512, 776 |
| FaeI | CATG | 7 cut(s) | 80, 485, 516, 539, 734, 932, 986 |
| FatI | CATG | 7 cut(s) | 76, 481, 512, 535, 730, 928, 982 |
| FbaI | TGATCA | 3 cut(s) | 478, 1063, 1141 |
| Fnu4HI | GCNGC | 5 cut(s) | 188, 387, 540, 618, 786 |
| FokI | GGATG | 5 cut(s) | 59, 596, 676, 738, 905 |
| Fsp4HI | GCNGC | 5 cut(s) | 188, 387, 540, 618, 786 |
| FspBI | CTAG | 4 cut(s) | 44, 468, 668, 1222 |
| GluI | GCNGC | 5 cut(s) | 188, 387, 540, 618, 786 |
| HaeIII | GGCC | 9 cut(s) | 67, 89, 218, 230, 264, 302, 358, 386, 914 |
| HapII | CCGG | 6 cut(s) | 82, 347, 355, 381, 410, 1121 |
| Hin1I | GRCGYC | 1 cut(s) | 150 |
| Hin1II | CATG | 7 cut(s) | 80, 485, 516, 539, 734, 932, 986 |
| HinfI | GANTC | 4 cut(s) | 38, 340, 578, 1195 |
| HpaII | CCGG | 6 cut(s) | 82, 347, 355, 381, 410, 1121 |
| HphI | GGTGA | 4 cut(s) | 88, 181, 193, 500 |
| Hpy166II | GTNNAC | 4 cut(s) | 126, 145, 402, 1080 |
| Hpy188I | TCNGA | 5 cut(s) | 259, 583, 871, 1068, 1146 |
| Hpy188III | TCNNGA | 6 cut(s) | 61, 319, 331, 482, 723, 1037 |
| Hpy8I | GTNNAC | 4 cut(s) | 126, 145, 402, 1080 |
| Hpy99I | CGWCG | 2 cut(s) | 152, 552 |
| HpyCH4III | ACNGT | 7 cut(s) | 100, 130, 406, 624, 704, 1054, 1158 |
| HpyCH4IV | ACGT | 1 cut(s) | 150 |
| HpyCH4V | TGCA | 5 cut(s) | 244, 617, 656, 1009, 1205 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 86 |
| HpyF3I | CTNAG | 2 cut(s) | 855, 881 |
| HpySE526I | ACGT | 1 cut(s) | 150 |
| Hsp92I | GRCGYC | 1 cut(s) | 150 |
| Hsp92II | CATG | 7 cut(s) | 80, 485, 516, 539, 734, 932, 986 |
| Ksp22I | TGATCA | 3 cut(s) | 478, 1063, 1141 |
| Kzo9I | GATC | 4 cut(s) | 478, 1033, 1063, 1141 |
| LguI | GCTCTTC | 1 cut(s) | 549 |
| LmnI | GCTCC | 3 cut(s) | 8, 357, 1135 |
| Lsp1109I | GCAGC | 3 cut(s) | 199, 526, 629 |
| LweI | GCATC | 4 cut(s) | 81, 643, 654, 716 |
| MaeI | CTAG | 4 cut(s) | 44, 468, 668, 1222 |
| MaeII | ACGT | 1 cut(s) | 150 |
| MaeIII | GTNAC | 4 cut(s) | 454, 506, 624, 1211 |
| MalI | GATC | 4 cut(s) | 480, 1035, 1065, 1143 |
| MboI | GATC | 4 cut(s) | 478, 1033, 1063, 1141 |
| MboII | GAAGA | 4 cut(s) | 406, 536, 662, 1190 |
| MfeI | CAATTG | 1 cut(s) | 232 |
| MhlI | GDGCHC | 1 cut(s) | 354 |
| MlsI | TGGCCA | 1 cut(s) | 302 |
| MluCI | AATT | 6 cut(s) | 232, 607, 715, 996, 1162, 1172 |
| MluNI | TGGCCA | 1 cut(s) | 302 |
| MlyI | GAGTC | 1 cut(s) | 1204 |
| MmeI | TCCRAC | 1 cut(s) | 498 |
| Mox20I | TGGCCA | 1 cut(s) | 302 |
| Mph1103I | ATGCAT | 1 cut(s) | 658 |
| MscI | TGGCCA | 1 cut(s) | 302 |
| MseI | TTAA | 5 cut(s) | 273, 605, 948, 999, 1160 |
| MslI | CAYNNNNRTG | 1 cut(s) | 440 |
| Msp20I | TGGCCA | 1 cut(s) | 302 |
| MspCI | CTTAAG | 1 cut(s) | 272 |
| MspI | CCGG | 6 cut(s) | 82, 347, 355, 381, 410, 1121 |
| MspR9I | CCNGG | 6 cut(s) | 82, 110, 347, 382, 504, 680 |
| MunI | CAATTG | 1 cut(s) | 232 |
| MvaI | CCWGG | 3 cut(s) | 110, 504, 680 |
| MvnI | CGCG | 1 cut(s) | 552 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 86 |
| NciI | CCSGG | 3 cut(s) | 82, 347, 382 |
| NcoI | CCATGG | 1 cut(s) | 512 |
| NdeII | GATC | 4 cut(s) | 478, 1033, 1063, 1141 |
| NheI | GCTAGC | 1 cut(s) | 667 |
| NlaIII | CATG | 7 cut(s) | 80, 485, 516, 539, 734, 932, 986 |
| NlaIV | GGNNCC | 4 cut(s) | 10, 229, 385, 913 |
| NmeAIII | GCCGAG | 1 cut(s) | 93 |
| NmuCI | GTSAC | 3 cut(s) | 454, 506, 1211 |
| NsiI | ATGCAT | 1 cut(s) | 658 |
| NspI | RCATGY | 1 cut(s) | 539 |
| PagI | TCATGA | 1 cut(s) | 481 |
| PaqCI | CACCTGC | 1 cut(s) | 469 |
| PciSI | GCTCTTC | 1 cut(s) | 549 |
| PfeI | GAWTC | 3 cut(s) | 38, 340, 578 |
| PflFI | GACNNNGTC | 1 cut(s) | 149 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 366, 834 |
| PfoI | TCCNGGA | 2 cut(s) | 108, 678 |
| PkrI | GCNGC | 5 cut(s) | 189, 388, 541, 619, 787 |
| PleI | GAGTC | 1 cut(s) | 1203 |
| PpsI | GAGTC | 1 cut(s) | 1203 |
| PpuMI | RGGWCCY | 1 cut(s) | 112 |
| PshBI | ATTAAT | 1 cut(s) | 999 |
| Psp5II | RGGWCCY | 1 cut(s) | 112 |
| Psp6I | CCWGG | 3 cut(s) | 108, 502, 678 |
| PspEI | GGTNACC | 1 cut(s) | 506 |
| PspGI | CCWGG | 3 cut(s) | 108, 502, 678 |
| PspN4I | GGNNCC | 4 cut(s) | 10, 229, 385, 913 |
| PspPI | GGNCC | 6 cut(s) | 87, 112, 228, 357, 384, 912 |
| PspPPI | RGGWCCY | 1 cut(s) | 112 |
| PstI | CTGCAG | 1 cut(s) | 1011 |
| PsyI | GACNNNGTC | 1 cut(s) | 149 |
| RsaI | GTAC | 2 cut(s) | 239, 496 |
| RsaNI | GTAC | 2 cut(s) | 238, 495 |
| RseI | CAYNNNNRTG | 1 cut(s) | 440 |
| SapI | GCTCTTC | 1 cut(s) | 549 |
| SaqAI | TTAA | 5 cut(s) | 273, 605, 948, 999, 1160 |
| SatI | GCNGC | 5 cut(s) | 188, 387, 540, 618, 786 |
| Sau3AI | GATC | 4 cut(s) | 478, 1033, 1063, 1141 |
| Sau96I | GGNCC | 6 cut(s) | 87, 112, 228, 357, 384, 912 |
| SchI | GAGTC | 1 cut(s) | 1204 |
| ScrFI | CCNGG | 6 cut(s) | 82, 110, 347, 382, 504, 680 |
| SduI | GDGCHC | 1 cut(s) | 354 |
| SfaNI | GCATC | 4 cut(s) | 81, 643, 654, 716 |
| SfcI | CTRYAG | 1 cut(s) | 1007 |
| SinI | GGWCC | 1 cut(s) | 112 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 440 |
| SmlI | CTYRAG | 3 cut(s) | 61, 272, 317 |
| SmoI | CTYRAG | 3 cut(s) | 61, 272, 317 |
| Sse9I | AATT | 6 cut(s) | 232, 607, 715, 996, 1162, 1172 |
| SsiI | CCGC | 2 cut(s) | 387, 785 |
| SspI | AATATT | 1 cut(s) | 1003 |
| SspMI | CTAG | 4 cut(s) | 44, 468, 668, 1222 |
| StyD4I | CCNGG | 6 cut(s) | 80, 108, 345, 380, 502, 678 |
| StyI | CCWWGG | 3 cut(s) | 360, 512, 776 |
| TaaI | ACNGT | 7 cut(s) | 100, 130, 406, 624, 704, 1054, 1158 |
| TaiI | ACGT | 1 cut(s) | 153 |
| TaqI | TCGA | 1 cut(s) | 735 |
| TasI | AATT | 6 cut(s) | 232, 607, 715, 996, 1162, 1172 |
| TauI | GCSGC | 2 cut(s) | 389, 788 |
| TfiI | GAWTC | 3 cut(s) | 38, 340, 578 |
| Tru1I | TTAA | 5 cut(s) | 273, 605, 948, 999, 1160 |
| Tru9I | TTAA | 5 cut(s) | 273, 605, 948, 999, 1160 |
| TscAI | CASTG | 2 cut(s) | 627, 1131 |
| TseFI | GTSAC | 3 cut(s) | 454, 506, 1211 |
| TseI | GCWGC | 3 cut(s) | 187, 539, 617 |
| Tsp45I | GTSAC | 3 cut(s) | 454, 506, 1211 |
| TspDTI | ATGAA | 4 cut(s) | 653, 917, 968, 1145 |
| TspGWI | ACGGA | 2 cut(s) | 241, 563 |
| TspRI | CASTG | 2 cut(s) | 627, 1131 |
| Tth111I | GACNNNGTC | 1 cut(s) | 149 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 366, 834 |
| Vha464I | CTTAAG | 1 cut(s) | 272 |
| VpaK11BI | GGWCC | 1 cut(s) | 112 |
| VspI | ATTAAT | 1 cut(s) | 999 |
| XapI | RAATTY | 1 cut(s) | 1162 |
| XceI | RCATGY | 1 cut(s) | 539 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 116 |
| XspI | CTAG | 4 cut(s) | 44, 468, 668, 1222 |
| ZraI | GACGTC | 1 cut(s) | 151 |
| Zsp2I | ATGCAT | 1 cut(s) | 658 |