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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g00410 |
| malus_domestica | MD04G1004400.v1.1 MD17G1181400.v1.1 |
| prunus_persica | Prupe.1G004100_v2.0.a1 |
| pyrus_communis | pycom04g00450 |
| rosa_chinensis | RchiOBHm_Chr4g0385811 |
| rosa_laevigata | RLG00000010206 RLG00000010212 RLG00000010227 RLG00000010229 |
| rosa_multiflora | Rmu_co8457409.1_g000001 Rmu_sc0004773.1_g000002 Rmu_sc0008728.1_g000012 Rmu_sc0015537.1_g000002 Rmu_sc0029486.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00333310 |
| rosa_rugosa | Rorug03G0060400 Rorug03G0300500 Rorug03G0300900 Rorug04G0011200 |
| rosa_samantha | Rh4AG004500 Rh4AG004800 Rh4AG005200 Rh4AG005600 Rh4BG004100 Rh4DG004300 Rh4DG004700 Rh4DG005900 Rh4DG006200 Rh4DG080400 |
| rosa_wichuraiana | Rw4G000410 Rw4G000420 Rw4G000430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 246 |
| AccB1I | GGYRCC | 1 cut(s) | 167 |
| AccII | CGCG | 1 cut(s) | 61 |
| AciI | CCGC | 5 cut(s) | 59, 61, 171, 263, 397 |
| AcsI | RAATTY | 1 cut(s) | 98 |
| AcuI | CTGAAG | 1 cut(s) | 56 |
| AfaI | GTAC | 1 cut(s) | 150 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 125, 210 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 201, 233 |
| AoxI | GGCC | 3 cut(s) | 23, 156, 363 |
| ApeKI | GCWGC | 1 cut(s) | 323 |
| ApoI | RAATTY | 1 cut(s) | 98 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 90, 122 |
| AspS9I | GGNCC | 3 cut(s) | 24, 157, 364 |
| AsuC2I | CCSGG | 3 cut(s) | 19, 126, 328 |
| AsuHPI | GGTGA | 1 cut(s) | 193 |
| BanI | GGYRCC | 1 cut(s) | 167 |
| BanII | GRGCYC | 1 cut(s) | 201 |
| BbvCI | CCTCAGC | 1 cut(s) | 299 |
| BbvI | GCAGC | 1 cut(s) | 335 |
| BccI | CCATC | 1 cut(s) | 375 |
| BceAI | ACGGC | 1 cut(s) | 171 |
| BcnI | CCSGG | 3 cut(s) | 19, 126, 328 |
| BfaI | CTAG | 1 cut(s) | 221 |
| BfuAI | ACCTGC | 1 cut(s) | 246 |
| BisI | GCNGC | 2 cut(s) | 59, 324 |
| BlsI | GCNGC | 2 cut(s) | 60, 325 |
| Bme1390I | CCNGG | 3 cut(s) | 19, 126, 328 |
| BmgT120I | GGNCC | 3 cut(s) | 24, 157, 364 |
| BmiI | GGNNCC | 2 cut(s) | 169, 242 |
| BmrFI | CCNGG | 3 cut(s) | 19, 126, 328 |
| Bpu10I | CCTNAGC | 1 cut(s) | 299 |
| BpuMI | CCSGG | 3 cut(s) | 19, 126, 328 |
| BsaJI | CCNNGG | 1 cut(s) | 59 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 67, 97 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 125, 210 |
| BseDI | CCNNGG | 1 cut(s) | 59 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 125, 210 |
| BseMII | CTCAG | 1 cut(s) | 290 |
| BseRI | GAGGAG | 7 cut(s) | 72, 75, 78, 108, 111, 290, 293 |
| BseXI | GCAGC | 1 cut(s) | 335 |
| Bsh1236I | CGCG | 1 cut(s) | 61 |
| BshFI | GGCC | 3 cut(s) | 25, 158, 365 |
| BshNI | GGYRCC | 1 cut(s) | 167 |
| BsiSI | CCGG | 4 cut(s) | 19, 126, 165, 327 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 125, 210 |
| BsnI | GGCC | 3 cut(s) | 25, 158, 365 |
| Bsp1286I | GDGCHC | 1 cut(s) | 201 |
| BspACI | CCGC | 5 cut(s) | 59, 61, 171, 263, 397 |
| BspANI | GGCC | 3 cut(s) | 25, 158, 365 |
| BspCNI | CTCAG | 1 cut(s) | 291 |
| BspFNI | CGCG | 1 cut(s) | 61 |
| BspLI | GGNNCC | 2 cut(s) | 169, 242 |
| BspMI | ACCTGC | 1 cut(s) | 246 |
| BspT107I | GGYRCC | 1 cut(s) | 167 |
| BssECI | CCNNGG | 1 cut(s) | 59 |
| Bst4CI | ACNGT | 1 cut(s) | 245 |
| Bst6I | CTCTTC | 3 cut(s) | 267, 344, 354 |
| BstDEI | CTNAG | 1 cut(s) | 299 |
| BstDSI | CCRYGG | 1 cut(s) | 59 |
| BstFNI | CGCG | 1 cut(s) | 61 |
| BstSCI | CCNGG | 3 cut(s) | 17, 124, 326 |
| BstUI | CGCG | 1 cut(s) | 61 |
| BstV1I | GCAGC | 1 cut(s) | 335 |
| BsuRI | GGCC | 3 cut(s) | 25, 158, 365 |
| BtgI | CCRYGG | 1 cut(s) | 59 |
| BveI | ACCTGC | 1 cut(s) | 246 |
| Cfr13I | GGNCC | 3 cut(s) | 24, 157, 364 |
| Cfr42I | CCGCGG | 1 cut(s) | 62 |
| Csp6I | GTAC | 1 cut(s) | 149 |
| CviJI | RGCY | 6 cut(s) | 25, 58, 158, 199, 326, 365 |
| CviKI_1 | RGCY | 6 cut(s) | 25, 58, 158, 199, 326, 365 |
| CviQI | GTAC | 1 cut(s) | 149 |
| DdeI | CTNAG | 1 cut(s) | 299 |
| Eam1104I | CTCTTC | 3 cut(s) | 267, 344, 354 |
| EarI | CTCTTC | 3 cut(s) | 267, 344, 354 |
| EciI | GGCGGA | 1 cut(s) | 278 |
| Eco24I | GRGCYC | 1 cut(s) | 201 |
| Eco57I | CTGAAG | 1 cut(s) | 56 |
| EcoT38I | GRGCYC | 1 cut(s) | 201 |
| FaiI | YATR | 1 cut(s) | 74 |
| FauI | CCCGC | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 2 cut(s) | 59, 324 |
| FriOI | GRGCYC | 1 cut(s) | 201 |
| Fsp4HI | GCNGC | 2 cut(s) | 59, 324 |
| FspBI | CTAG | 1 cut(s) | 221 |
| GluI | GCNGC | 2 cut(s) | 59, 324 |
| HaeIII | GGCC | 3 cut(s) | 25, 158, 365 |
| HapII | CCGG | 4 cut(s) | 19, 126, 165, 327 |
| HinfI | GANTC | 1 cut(s) | 373 |
| HpaII | CCGG | 4 cut(s) | 19, 126, 165, 327 |
| HphI | GGTGA | 1 cut(s) | 193 |
| Hpy166II | GTNNAC | 1 cut(s) | 340 |
| Hpy188I | TCNGA | 2 cut(s) | 36, 372 |
| Hpy188III | TCNNGA | 1 cut(s) | 382 |
| Hpy8I | GTNNAC | 1 cut(s) | 340 |
| HpyAV | CCTTC | 2 cut(s) | 31, 37 |
| HpyCH4III | ACNGT | 1 cut(s) | 245 |
| HpyCH4IV | ACGT | 1 cut(s) | 147 |
| HpyCH4V | TGCA | 1 cut(s) | 237 |
| HpyF3I | CTNAG | 1 cut(s) | 299 |
| HpySE526I | ACGT | 1 cut(s) | 147 |
| KspI | CCGCGG | 1 cut(s) | 62 |
| Lsp1109I | GCAGC | 1 cut(s) | 335 |
| MaeI | CTAG | 1 cut(s) | 221 |
| MaeII | ACGT | 1 cut(s) | 147 |
| MboII | GAAGA | 5 cut(s) | 284, 361, 368, 371, 403 |
| MhlI | GDGCHC | 1 cut(s) | 201 |
| MluCI | AATT | 3 cut(s) | 98, 136, 232 |
| MmeI | TCCRAC | 1 cut(s) | 207 |
| MspA1I | CMGCKG | 3 cut(s) | 61, 173, 399 |
| MspI | CCGG | 4 cut(s) | 19, 126, 165, 327 |
| MspR9I | CCNGG | 3 cut(s) | 19, 126, 328 |
| MvnI | CGCG | 1 cut(s) | 61 |
| NciI | CCSGG | 3 cut(s) | 19, 126, 328 |
| NlaIV | GGNNCC | 2 cut(s) | 169, 242 |
| PfeI | GAWTC | 1 cut(s) | 373 |
| PkrI | GCNGC | 2 cut(s) | 60, 325 |
| PspN4I | GGNNCC | 2 cut(s) | 169, 242 |
| PspPI | GGNCC | 3 cut(s) | 24, 157, 364 |
| RsaI | GTAC | 1 cut(s) | 150 |
| RsaNI | GTAC | 1 cut(s) | 149 |
| SacII | CCGCGG | 1 cut(s) | 62 |
| SatI | GCNGC | 2 cut(s) | 59, 324 |
| Sau96I | GGNCC | 3 cut(s) | 24, 157, 364 |
| ScrFI | CCNGG | 3 cut(s) | 19, 126, 328 |
| SduI | GDGCHC | 1 cut(s) | 201 |
| SetI | ASST | 7 cut(s) | 11, 42, 82, 118, 150, 260, 318 |
| Sfr303I | CCGCGG | 1 cut(s) | 62 |
| SgrBI | CCGCGG | 1 cut(s) | 62 |
| Sse9I | AATT | 3 cut(s) | 98, 136, 232 |
| SsiI | CCGC | 5 cut(s) | 59, 61, 171, 263, 397 |
| SspMI | CTAG | 1 cut(s) | 221 |
| StyD4I | CCNGG | 3 cut(s) | 17, 124, 326 |
| TaaI | ACNGT | 1 cut(s) | 245 |
| TaiI | ACGT | 1 cut(s) | 150 |
| TasI | AATT | 3 cut(s) | 98, 136, 232 |
| TauI | GCSGC | 1 cut(s) | 61 |
| TfiI | GAWTC | 1 cut(s) | 373 |
| TseI | GCWGC | 1 cut(s) | 323 |
| TspGWI | ACGGA | 1 cut(s) | 226 |
| XapI | RAATTY | 1 cut(s) | 98 |
| XspI | CTAG | 1 cut(s) | 221 |