RchiOBHm_Chr4g0403131

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0003682
Physical Location & Seq
Reverse (-)
22166698 .. 22170643
3946 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37489

Sequence Viewer

Length: 3426 bp
ATGGTCGATTCCACCCACTCCTTTTCCCCAATCCATTCTCATATGACCCATTCCGTTTATTCACTACCACAAACCCCTAATCACCTCTTTTACACCACTTCTCAGCCTCTGCAACATCCGAGAAATTTCCATTCACCATGTCAACATCCTCCAACTCCAGGTGAGGTCTATCACCATTACCCACCTACCCAGCCTTATTGCATCCCCACAAACCAGTTTGTTCCTCCACCTTCCACTCATGAGCAACCACGTCCTATTTCAGATCTAAAGCAGGTGGAAATTGACCTTCAGCTTCGTCCAATTCCAATGGAACCTGACCGGGTACGTGATTGGGAGGTCCCAATTGTTGATTCAGGCTACTCCTCTTTCACACCAGAGCCTACGGTCAAGCTTAAGGGGGCTGAGAAACCACCGTCACCACCACGAGGTTCCGGCGAACTTTCACACAAGGATTTTGAATTGCAAGGTCACAAAGATCACACAGATGCTAAGCTGTGTGAGATGCAAAAATCTTTTAAGAGTTCGACGGATGCCTTCATGTCTGAATTCAGGGAGGAGCTACGGCGGTTAAGGGCTTCGAAGCAAACGCCGGCAGGCCAAGTTGATAATCCATTGAAGTTTGGCTCTCTGCCGTCGTCAACACATGAAATTATTCCGGCTACTATTAAGGCTTCTTCGTCAGTCGTATCGTCTTCTAATGGTAATCCGATAATAACTTCTCTTAATACTGGGTTGAATTTATCTCACCATGAAGTAGGTACTGAACCACTGGCATTTGCTATTTCAACAATATCTACTGCTACTCTGGTTTGTAGTGATAAAAGTGAGGAGGTTGTGAGTGGTGCTAATACTAGCTGTGTGACTTCTTCTGAAACCAAGCCAAATGGAGTTGCACTGATTTTATACAGGGTTTATGCAAAAGTTGTTCACATTAGAATGGCCTCTCTAACTGCTGTCAAATGCATTCCTACTGTTGCCATTCGGTTTCTTATTCAAAAGGTTGAGGCTGCTACAAGTATTTGGATTGCTTTACATGATCCAGAAAAGTCAGTTACCAAAGCTGTAGAGGATTTCTGGGATTGTTATGGAAATGACTTTGGGACTGACTATTTAGGCCTTTTCAAAGCATGTTCCCATGTCCATTATACGGTCCGTTATCCTGCTGCAGAGGTATTAGCCGCTGCTTTGGACAAATTTCCTGATTCTATACAGGAATCCCTTTCTACTTTACTTCTCATGTATGTTTGTGATGCTAGTTTGTCTGAGAACAATGTCAATACGGGTTGGCTCAAGGTTGACAGTGAGATGGTGATGTGTTCTGCTGATGCACAATCTGATGCGAAGTTATGGCCATGGTTCATTCTTTGTTTACAGCTTTATCATGGGGAAACAAAGAAATCTATTCTCGTCTATAGGGAAGCATTCAACCAAATGGGTGAAATGAGTCAAACCACATTATCTCATAATGGGCCTACACTTGCTGGTAAGGATAATCTCATAGGAATTGTAGCAATTATTGACTGGTTTCGGTGTGCTTTATCAGAATTTGGCACTGTGGCTGCTCTAAATGCATGGTTAAATGATAATTTTCTTTGTTTACCTCTTGAGAACAAACCGGAGAAAATGACTTTGTTTCTTGCTGATAAGTTGGAAAAAATGGGACATAAAAGGCTACTTACAAAATCTGCTGCTGTTATGTTTGTCAACAAGGATGGAAAATATGTTGCTCTGGGAAGCAAAGATGTAGATACATTTGTGGTTGTAATTAAGAAAATGGAACATGAATTTATTGAGCTCCGAAATCACTTTTTGTCTCAAGGAGTAGTGAACTTGCTTGAAGAGGTATCTGAGCTTGCTTTTGCAAAATTTGGTCCCAGTGTTATTTTATTGACTGGTTTACAAGGAATTGGGAAGACAACAATATTCACTACATTGAAGATGGCATTTTTGTTGTGCCAGGTTGCACTAACACGCATGGGAAAGTTACAAGATGAAAGATTTTTATTCTCTGGTAGCTTTAGTTATGATAATTATGCATGTTTTGATATTGTCATGGCAAAACAATTACCAAATGCAGCTTGTCATTCAATCTTGTTTAGGCTCATATTGGGAGCTCTTAGACAAGAATCATCAGAAGCCCTAAGGAGATGGCAATATGCACTGCTTCTTAGCTCTTTTCAGTATTGTCAACACATGCTTGATCTAGATATCCCATCAACAGTTCTGCAATTTTTGTTGCTTGATGAGCAAGAGGTTGAAGATCTGGATCTCCAGAAAATTAGTCGAGAACAAGCAGAAGTTGCTCATGGAAATTTCTTTATTTTAAGAAAAAAAGCTCAATCTGTTTTGGATTTGGTAATAAATGATTCTACTCAAGGATGTGAAATTGGAGAGATGATGTCACTCTACATTTTGGATGCAATCATATGCGTAGATCATGATGGGGTACATTCTCAAAACTCAATGCAGCAGCAAGCACAAACTCTGGAGGCTGAGCTTGCTTTGCTATTGAAAATAAAATATCTCTTTGCATCCTTTATTTCCCGTGATGAAGACTATTATGCATGTGTTGAAGGGAGAGAAATTATCTCCAATCTTAGTATCACAGCTGCCTCAAAATTTCTATTAAATTTGTTGGTCCAGCCTGAGCATGAACACCGCAAATGGTCTGCTGCAATTTCTGTTGGATTAATCTCAATTGGTCTATATATTACTGATCATAAGCAAAAGTTTGAGAAGTGTTTGGGAGTTGTTAAGTCTACCTTCAAACGAAATCAGAGTTTCCATCAGTTGTATTTGCCTTATGTTAGTGTGGGAAAAGCATTTACAAGTCTGCCAAATGAGTATCAAATTGATCAAGTAGATGTCAAGGCTGTTATTGCAATTGTAATTATTCAATTGCATTCAAATGAAGCTACTGAGTTATGCAAGGGAATGGACAAACTTCTTCAAGCTTTTGGGATATATATAGCCTTCGCTTATTTGGCCTACCATCTTTGCTCAGTTGGTCCACAACTGTTAATTGAGCAATTCATTGATGTTGCATTCGTTGGGAATTTTTATGATACAAATGTCGATCAATGGCTCCCTGCTCATGATGAAAGATTCATTTGCAAAGGTACGAAGAGAATCAGCAGAAGGTTACTCACATTGCTTCAAAACCCCTTTGCCAATGTCAGAATGGGTATGATGACACCATCCTGCACCTCCAATGACAAGCTTGGGGTGCATGAGGCCACAAAGACGGACCAACTTGCTGATAAAGACAACGTCTCATTTCATCAATGGGGTATCACATTTGTCATCTTCTACTTCGAGTTTGTCTATCATTTCTTCATGTCTCAGTGTTGCTGGTATAACATTCTTGTCAAGATGCTCCACATGGTTGATTTTTTTCAAGATGCTCCACATGCTCCCAGATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Nup192

Protein Analysis

1141

Amino Acids

128.32

Weight (kDa)

6.01

Isoelectric Point (pI)

40.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 262
Acc36I ACCTGC 1 cut(s) 262
AccI GTMKAC 1 cut(s) 2759
AciI CCGC 3 cut(s) 565, 1179, 2659
AclWI GGATC 2 cut(s) 1031, 2274
AcoI YGGCCR 1 cut(s) 1349
AcuI CTGAAG 1 cut(s) 272
AfaI GTAC 4 cut(s) 324, 760, 2448, 3121
AfiI CCNNNNNNNGG 3 cut(s) 158, 425, 1147
AflII CTTAAG 1 cut(s) 392
AjiI CACGTC 1 cut(s) 251
AjnI CCWGG 2 cut(s) 157, 1956
AjuI GAANNNNNNNTTGG 2 cut(s) 334, 366
Alw21I GWGCWC 2 cut(s) 1797, 2116
Alw26I GTCTC 3 cut(s) 1818, 3277, 3345
AlwI GGATC 2 cut(s) 1031, 2274
AlwNI CAGNNNCTG 1 cut(s) 109
AoxI GGCC 7 cut(s) 595, 939, 1114, 1349, 1469, 2985, 3234
AseI ATTAAT 1 cut(s) 2690
Asp700I GAANNNNTTC 1 cut(s) 651
AspS9I GGNCC 7 cut(s) 337, 1150, 1469, 1871, 2638, 3008, 3247
AsuC2I CCSGG 1 cut(s) 320
AsuHPI GGTGA 8 cut(s) 74, 126, 164, 173, 408, 737, 1321, 1448
AsuII TTCGAA 1 cut(s) 578
AvaII GGWCC 6 cut(s) 337, 1150, 1871, 2638, 3008, 3247
AxyI CCTNAGG 1 cut(s) 2141
BaeI ACNNNNGTAYC 4 cut(s) 1740, 1773, 3057, 3090
BalI TGGCCA 1 cut(s) 1351
BanII GRGCYC 2 cut(s) 1797, 2116
BauI CACGAG 1 cut(s) 423
BbsI GAAGAC 3 cut(s) 684, 1919, 2559
Bbv12I GWGCWC 2 cut(s) 1797, 2116
BccI CCATC 9 cut(s) 1300, 1706, 1933, 2142, 2221, 2435, 2793, 3000, 3205
BceAI ACGGC 2 cut(s) 578, 616
BciT130I CCWGG 2 cut(s) 159, 1958
BclI TGATCA 2 cut(s) 2716, 2854
BcnI CCSGG 1 cut(s) 320
BcoDI GTCTC 3 cut(s) 1818, 3277, 3345
BfaI CTAG 3 cut(s) 852, 1254, 2204
BfmI CTRYAG 3 cut(s) 1062, 1164, 1411
BfrI CTTAAG 1 cut(s) 392
BfuAI ACCTGC 1 cut(s) 262
BglII AGATCT 2 cut(s) 262, 2260
BlpI GCTNAGC 2 cut(s) 489, 2493
Bme1390I CCNGG 3 cut(s) 159, 320, 1958
Bme18I GGWCC 6 cut(s) 337, 1150, 1871, 2638, 3008, 3247
BmgBI CACGTC 1 cut(s) 251
BmgT120I GGNCC 7 cut(s) 337, 1150, 1469, 1871, 2638, 3008, 3247
BmiI GGNNCC 5 cut(s) 312, 339, 430, 1873, 3086
BmrFI CCNGG 3 cut(s) 159, 320, 1958
BmrI ACTGGG 2 cut(s) 738, 1869
BmuI ACTGGG 2 cut(s) 738, 1869
BpiI GAAGAC 3 cut(s) 684, 1919, 2559
BpmI CTGGAG 3 cut(s) 141, 2255, 2507
Bpu10I CCTNAGC 1 cut(s) 2646
Bpu1102I GCTNAGC 2 cut(s) 489, 2493
Bpu14I TTCGAA 1 cut(s) 578
BpuEI CTTGAG 4 cut(s) 1274, 1625, 1800, 2358
BpuMI CCSGG 1 cut(s) 320
BsaAI YACGTR 1 cut(s) 326
BsaBI GATNNNNATC 1 cut(s) 2265
BsaJI CCNNGG 1 cut(s) 1352
BsaWI WCCGGW 1 cut(s) 1615
Bsc4I CCNNNNNNNGG 3 cut(s) 158, 425, 1147
Bse118I RCCGGY 1 cut(s) 589
Bse1I ACTGG 6 cut(s) 214, 733, 774, 1526, 1875, 1897
Bse21I CCTNAGG 1 cut(s) 2141
Bse3DI GCAATG 1 cut(s) 3149
Bse8I GATNNNNATC 1 cut(s) 2265
BseBI CCWGG 2 cut(s) 159, 1958
BseDI CCNNGG 1 cut(s) 1352
BseGI GGATG 9 cut(s) 115, 145, 201, 535, 1717, 2384, 2422, 2531, 3197
BseJI GATNNNNATC 1 cut(s) 2265
BseLI CCNNNNNNNGG 3 cut(s) 158, 425, 1147
BseMI GCAATG 1 cut(s) 3149
BseMII CTCAG 9 cut(s) 116, 393, 1254, 1839, 2484, 2637, 2910, 3015, 3356
BseNI ACTGG 6 cut(s) 214, 733, 774, 1526, 1875, 1897
BseRI GAGGAG 3 cut(s) 352, 569, 842
BseYI CCCAGC 1 cut(s) 189
BsgI GTGCAG 1 cut(s) 3187
BshFI GGCC 7 cut(s) 597, 941, 1116, 1351, 1471, 2987, 3236
BsiHKAI GWGCWC 2 cut(s) 1797, 2116
BsiSI CCGG 5 cut(s) 319, 432, 590, 656, 1616
BslFI GGGAC 4 cut(s) 323, 1114, 1674, 1857
BslI CCNNNNNNNGG 3 cut(s) 158, 425, 1147
BsmAI GTCTC 3 cut(s) 1818, 3277, 3345
BsmBI CGTCTC 1 cut(s) 3277
BsmFI GGGAC 4 cut(s) 323, 1114, 1674, 1857
BsmI GAATGC 4 cut(s) 963, 1421, 2902, 3044
BsnI GGCC 7 cut(s) 597, 941, 1116, 1351, 1471, 2987, 3236
Bsp119I TTCGAA 1 cut(s) 578
Bsp1286I GDGCHC 2 cut(s) 1797, 2116
Bsp1720I GCTNAGC 2 cut(s) 489, 2493
Bsp19I CCATGG 1 cut(s) 1352
BspACI CCGC 3 cut(s) 565, 1179, 2659
BspANI GGCC 7 cut(s) 597, 941, 1116, 1351, 1471, 2987, 3236
BspCNI CTCAG 9 cut(s) 115, 394, 1255, 1840, 2485, 2638, 2911, 3014, 3355
BspHI TCATGA 3 cut(s) 238, 2437, 3094
BspLI GGNNCC 5 cut(s) 312, 339, 430, 1873, 3086
BspMAI CTGCAG 1 cut(s) 1168
BspMI ACCTGC 1 cut(s) 262
BspPI GGATC 2 cut(s) 1031, 2274
BspT104I TTCGAA 1 cut(s) 578
BspTI CTTAAG 1 cut(s) 392
BsrDI GCAATG 1 cut(s) 3149
BsrFI RCCGGY 1 cut(s) 589
BsrI ACTGG 6 cut(s) 214, 733, 774, 1526, 1875, 1897
BssAI RCCGGY 1 cut(s) 589
BssECI CCNNGG 1 cut(s) 1352
BssSI CACGAG 1 cut(s) 423
BssT1I CCWWGG 1 cut(s) 1352
Bst2BI CACGAG 1 cut(s) 423
Bst2UI CCWGG 2 cut(s) 159, 1958
Bst4CI ACNGT 8 cut(s) 385, 414, 973, 1150, 1301, 1555, 2221, 3018
Bst6I CTCTTC 2 cut(s) 1833, 3119
BstAFI CTTAAG 1 cut(s) 392
BstAPI GCANNNNNTGC 1 cut(s) 2300
BstBAI YACGTR 1 cut(s) 326
BstBI TTCGAA 1 cut(s) 578
BstC8I GCNNGC 5 cut(s) 591, 595, 1854, 2475, 2499
BstDSI CCRYGG 1 cut(s) 1352
BstF5I GGATG 9 cut(s) 115, 145, 201, 535, 1717, 2384, 2422, 2531, 3197
BstMAI GTCTC 3 cut(s) 1818, 3277, 3345
BstMWI GCNNNNNNNGC 9 cut(s) 1568, 2245, 2300, 2498, 2503, 2879, 2984, 3226, 3410
BstNI CCWGG 2 cut(s) 159, 1958
BstNSI RCATGY 5 cut(s) 1131, 2040, 2197, 2568, 3413
BstSCI CCNGG 3 cut(s) 157, 318, 1956
BstSFI CTRYAG 3 cut(s) 1062, 1164, 1411
BstV2I GAAGAC 3 cut(s) 684, 1919, 2559
BstX2I RGATCY 3 cut(s) 262, 2260, 2266
BstYI RGATCY 3 cut(s) 262, 2260, 2266
Bsu36I CCTNAGG 1 cut(s) 2141
BsuRI GGCC 7 cut(s) 597, 941, 1116, 1351, 1471, 2987, 3236
BtgI CCRYGG 1 cut(s) 1352
BtrI CACGTC 1 cut(s) 251
BtsCI GGATG 9 cut(s) 115, 145, 201, 535, 1717, 2384, 2422, 2531, 3197
BtsI GCAGTG 1 cut(s) 2159
BtsIMutI CAGTG 7 cut(s) 767, 893, 1306, 1551, 1882, 2159, 3350
BveI ACCTGC 1 cut(s) 262
Cac8I GCNNGC 5 cut(s) 591, 595, 1854, 2475, 2499
CaiI CAGNNNCTG 1 cut(s) 109
CciI TCATGA 3 cut(s) 238, 2437, 3094
Cfr10I RCCGGY 1 cut(s) 589
Cfr13I GGNCC 7 cut(s) 337, 1150, 1469, 1871, 2638, 3008, 3247
CpoI CGGWCCG 1 cut(s) 1150
Csp6I GTAC 4 cut(s) 323, 759, 2447, 3120
CspI CGGWCCG 1 cut(s) 1150
CviQI GTAC 4 cut(s) 323, 759, 2447, 3120
EaeI YGGCCR 1 cut(s) 1349
Eam1104I CTCTTC 2 cut(s) 1833, 3119
EarI CTCTTC 2 cut(s) 1833, 3119
Ecl136II GAGCTC 2 cut(s) 1795, 2114
Eco130I CCWWGG 1 cut(s) 1352
Eco147I AGGCCT 1 cut(s) 1116
Eco24I GRGCYC 2 cut(s) 1797, 2116
Eco32I GATATC 1 cut(s) 2209
Eco47I GGWCC 6 cut(s) 337, 1150, 1871, 2638, 3008, 3247
Eco53kI GAGCTC 2 cut(s) 1795, 2114
Eco57I CTGAAG 1 cut(s) 272
Eco81I CCTNAGG 1 cut(s) 2141
EcoICRI GAGCTC 2 cut(s) 1795, 2114
EcoO109I RGGNCCY 1 cut(s) 337
EcoRI GAATTC 1 cut(s) 545
EcoRII CCWGG 2 cut(s) 157, 1956
EcoRV GATATC 1 cut(s) 2209
EcoT14I CCWWGG 1 cut(s) 1352
EcoT22I ATGCAT 4 cut(s) 965, 1573, 2038, 2566
EcoT38I GRGCYC 2 cut(s) 1797, 2116
ErhI CCWWGG 1 cut(s) 1352
Esp3I CGTCTC 1 cut(s) 3277
FalI AAGNNNNNCTT 2 cut(s) 2747, 2779
FaqI GGGAC 4 cut(s) 323, 1114, 1674, 1857
FauNDI CATATG 2 cut(s) 42, 2426
FbaI TGATCA 2 cut(s) 2716, 2854
FblI GTMKAC 1 cut(s) 2759
FokI GGATG 9 cut(s) 102, 132, 188, 542, 1724, 2391, 2429, 2518, 3184
FriOI GRGCYC 2 cut(s) 1797, 2116
FspBI CTAG 3 cut(s) 852, 1254, 2204
GsaI CCCAGC 1 cut(s) 193
GsuI CTGGAG 3 cut(s) 141, 2255, 2507
HaeIII GGCC 7 cut(s) 597, 941, 1116, 1351, 1471, 2987, 3236
HapII CCGG 5 cut(s) 319, 432, 590, 656, 1616
HincII GTYRAC 5 cut(s) 143, 639, 1297, 1705, 2189
HindII GTYRAC 5 cut(s) 143, 639, 1297, 1705, 2189
HindIII AAGCTT 3 cut(s) 389, 2952, 3218
HinfI GANTC 9 cut(s) 8, 350, 1202, 1214, 1444, 2126, 2366, 3105, 3129
HpaII CCGG 5 cut(s) 319, 432, 590, 656, 1616
HphI GGTGA 8 cut(s) 74, 126, 164, 173, 408, 737, 1321, 1448
Hpy99I CGWCG 2 cut(s) 529, 637
HpyAV CCTTC 7 cut(s) 240, 296, 544, 2567, 2773, 2983, 3132
HpyCH4III ACNGT 8 cut(s) 385, 414, 973, 1150, 1301, 1555, 2221, 3018
HpyCH4IV ACGT 3 cut(s) 250, 325, 3270
HpyF10VI GCNNNNNNNGC 9 cut(s) 1568, 2245, 2300, 2498, 2503, 2879, 2984, 3226, 3410
HpySE526I ACGT 3 cut(s) 250, 325, 3270
KroI GCCGGC 1 cut(s) 589
KroNI GCCGGC 1 cut(s) 591
Ksp22I TGATCA 2 cut(s) 2716, 2854
LmnI GCTCC 7 cut(s) 556, 1800, 2111, 3090, 3381, 3409, 3418
MaeI CTAG 3 cut(s) 852, 1254, 2204
MaeII ACGT 3 cut(s) 250, 325, 3270
MaeIII GTNAC 7 cut(s) 414, 467, 859, 1051, 1983, 2400, 3141
MfeI CAATTG 4 cut(s) 342, 2697, 2883, 2897
MflI RGATCY 3 cut(s) 262, 2260, 2266
MhlI GDGCHC 2 cut(s) 1797, 2116
MlsI TGGCCA 1 cut(s) 1351
MluNI TGGCCA 1 cut(s) 1351
MlyI GAGTC 1 cut(s) 1453
MmeI TCCRAC 3 cut(s) 176, 1629, 2665
Mox20I TGGCCA 1 cut(s) 1351
Mph1103I ATGCAT 4 cut(s) 965, 1573, 2038, 2566
MroNI GCCGGC 1 cut(s) 589
MroXI GAANNNNTTC 1 cut(s) 651
MscI TGGCCA 1 cut(s) 1351
MslI CAYNNNNRTG 3 cut(s) 483, 935, 2907
Msp20I TGGCCA 1 cut(s) 1351
MspA1I CMGCKG 2 cut(s) 1181, 2609
MspCI CTTAAG 1 cut(s) 392
MspI CCGG 5 cut(s) 319, 432, 590, 656, 1616
MspR9I CCNGG 3 cut(s) 159, 320, 1958
MunI CAATTG 4 cut(s) 342, 2697, 2883, 2897
Mva1269I GAATGC 4 cut(s) 963, 1421, 2902, 3044
MvaI CCWGG 2 cut(s) 159, 1958
MwoI GCNNNNNNNGC 9 cut(s) 1568, 2245, 2300, 2498, 2503, 2879, 2984, 3226, 3410
NaeI GCCGGC 1 cut(s) 591
NciI CCSGG 1 cut(s) 320
NcoI CCATGG 1 cut(s) 1352
NdeI CATATG 2 cut(s) 42, 2426
NgoMIV GCCGGC 1 cut(s) 589
NlaIV GGNNCC 5 cut(s) 312, 339, 430, 1873, 3086
NmuCI GTSAC 4 cut(s) 414, 467, 859, 2400
NsiI ATGCAT 4 cut(s) 965, 1573, 2038, 2566
NspI RCATGY 5 cut(s) 1131, 2040, 2197, 2568, 3413
NspV TTCGAA 1 cut(s) 578
PagI TCATGA 3 cut(s) 238, 2437, 3094
PaqCI CACCTGC 1 cut(s) 262
PceI AGGCCT 1 cut(s) 1116
PctI GAATGC 4 cut(s) 963, 1421, 2902, 3044
PdiI GCCGGC 1 cut(s) 591
PdmI GAANNNNTTC 1 cut(s) 651
PfeI GAWTC 8 cut(s) 8, 350, 1202, 1214, 2126, 2366, 3105, 3129
PflFI GACNNNGTC 1 cut(s) 3269
PleI GAGTC 1 cut(s) 1452
PpsI GAGTC 1 cut(s) 1452
Ppu21I YACGTR 1 cut(s) 326
PpuMI RGGWCCY 1 cut(s) 337
PshBI ATTAAT 1 cut(s) 2690
Psp124BI GAGCTC 2 cut(s) 1797, 2116
Psp5II RGGWCCY 1 cut(s) 337
Psp6I CCWGG 2 cut(s) 157, 1956
PspFI CCCAGC 1 cut(s) 189
PspGI CCWGG 2 cut(s) 157, 1956
PspN4I GGNNCC 5 cut(s) 312, 339, 430, 1873, 3086
PspPI GGNCC 7 cut(s) 337, 1150, 1469, 1871, 2638, 3008, 3247
PspPPI RGGWCCY 1 cut(s) 337
PstI CTGCAG 1 cut(s) 1168
PstNI CAGNNNCTG 1 cut(s) 109
PsuI RGATCY 3 cut(s) 262, 2260, 2266
PsyI GACNNNGTC 1 cut(s) 3269
PvuII CAGCTG 1 cut(s) 2609
RsaI GTAC 4 cut(s) 324, 760, 2448, 3121
RsaNI GTAC 4 cut(s) 323, 759, 2447, 3120
RseI CAYNNNNRTG 3 cut(s) 483, 935, 2907
Rsr2I CGGWCCG 1 cut(s) 1150
RsrII CGGWCCG 1 cut(s) 1150
SacI GAGCTC 2 cut(s) 1797, 2116
Sau96I GGNCC 7 cut(s) 337, 1150, 1469, 1871, 2638, 3008, 3247
SchI GAGTC 1 cut(s) 1453
ScrFI CCNGG 3 cut(s) 159, 320, 1958
SduI GDGCHC 2 cut(s) 1797, 2116
SfcI CTRYAG 3 cut(s) 1062, 1164, 1411
SfuI TTCGAA 1 cut(s) 578
SinI GGWCC 6 cut(s) 337, 1150, 1871, 2638, 3008, 3247
SmiMI CAYNNNNRTG 3 cut(s) 483, 935, 2907
SmlI CTYRAG 5 cut(s) 392, 1289, 1604, 1815, 2373
SmoI CTYRAG 5 cut(s) 392, 1289, 1604, 1815, 2373
SseBI AGGCCT 1 cut(s) 1116
SsiI CCGC 3 cut(s) 565, 1179, 2659
SspI AATATT 1 cut(s) 1923
SspMI CTAG 3 cut(s) 852, 1254, 2204
SstI GAGCTC 2 cut(s) 1797, 2116
StuI AGGCCT 1 cut(s) 1116
StyD4I CCNGG 3 cut(s) 157, 318, 1956
StyI CCWWGG 1 cut(s) 1352
TaaI ACNGT 8 cut(s) 385, 414, 973, 1150, 1301, 1555, 2221, 3018
TaiI ACGT 3 cut(s) 253, 328, 3273
TaqI TCGA 6 cut(s) 6, 524, 578, 2284, 3075, 3315
TauI GCSGC 1 cut(s) 1181
TfiI GAWTC 8 cut(s) 8, 350, 1202, 1214, 2126, 2366, 3105, 3129
TscAI CASTG 7 cut(s) 774, 900, 1306, 1558, 1882, 2166, 3350
TseFI GTSAC 4 cut(s) 414, 467, 859, 2400
Tsp45I GTSAC 4 cut(s) 414, 467, 859, 2400
TspGWI ACGGA 4 cut(s) 43, 542, 1142, 3260
TspRI CASTG 7 cut(s) 774, 900, 1306, 1558, 1882, 2166, 3350
Tth111I GACNNNGTC 1 cut(s) 3269
Vha464I CTTAAG 1 cut(s) 392
VpaK11BI GGWCC 6 cut(s) 337, 1150, 1871, 2638, 3008, 3247
VspI ATTAAT 1 cut(s) 2690
XbaI TCTAGA 1 cut(s) 2203
XceI RCATGY 5 cut(s) 1131, 2040, 2197, 2568, 3413
XcmI CCANNNNNNNNNTGG 1 cut(s) 3178
XmiI GTMKAC 1 cut(s) 2759
XmnI GAANNNNTTC 1 cut(s) 651
XspI CTAG 3 cut(s) 852, 1254, 2204
Zsp2I ATGCAT 4 cut(s) 965, 1573, 2038, 2566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.