Rmu_sc0001218.1_g000016

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001218.1
Physical Location & Seq
Reverse (-)
82747 .. 85151
2405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001218.1_g000016.1.cds

Sequence Viewer

Length: 2220 bp
atgtctgaattcagggaggagctacggcggttaagggcttcgaagcaaactctgacaggccaagttgataatccattgaagtttggctctctgccatcgtcaacacatgaaaaatcaggcccgatgagcgactgtgagaatcatctcggactagacgcgattccagattccacagcaactggtgtggcccactacactcccacgcaagcccctgatggttcatctttgcctctgtcaatcgacttcgacgacaacagtgactctgaaaacaaagagagtattgctccgaatctagaaaccaatgaagaatacgcttgccagtatgaggatctgaagaagcgaggcctggtagacaaacactcaggttctgattcatccttggaggatgacgatgacagcgtcgttttggcagccaactccaagaagaaaaacttggaattctttgaagctaaaatcaaggtaaaagttctagaccctatcatgaataacaaagaggttgggttatctaaatctattgataatgaaattgaagactctagtctagtgaaagcggaggattgcaacgctaaggagttggtctttaagaggcacaatgagctagaagaaatttatagcgaagttcacatggatgtagatagtgatggagctagacagattctcaacagcctcataggttcgaatgggcattatcttgaatttaattcgaggttcgattctcactctccctcatccaatgagactaagacatccaagggtagtgaattagctttgggtgggctttgtgctatatatgatgatggtggaaggctgagaaattatggtttggttgatgaacaatctgttttatgtggtactatgttggagcggcaaaggttcaaaagagaaaatcctcagaaattatattcatctagtgatactaccaaaactgttaacaatgttattccaattgaagatccttcgataaccactgaagcggaaacaaagaatccggatggaatagatgggattgctacagaaattcttaatgttttatcacagaagaaagaggtgccattgggttttctacctttggaacgattaagtcttcatgagaatgatccaactagattctcagttgtcatggaagttggtgatactagcagtggttatattcaaatgggtgtccctcaacctattattaaagatgcccaatatgtagaaatcagtgctagtgatctcatcaaatgggacaaggccaaaatggggtactacgttggcattgatatggctaaaggattattccttggaaatagtgggtactggatgcaattcgatgaaaaatggaccgtcttgcttcatgtcttcaaatcattggaagaagagtatggtatggagttaatttttgtgaagaactcttatgaatctgtgcacgaatgtgttgtggagaagttcaaattatattggctactgcaatatctattgcttctagcggcaaaacattctttgagagagttcatgcttgatattgctactggacttgtttattttggtgatgacttccaatggagaggggcttcttgttctcaacctcttgagttttacagacttcattacctgacaaccaaatatgatgtttataggtttggtgttctactattggagattctcagtggcagaaaagtcattgatatgcaatatgaagaatcaagaagtatagttgaatgggcagtgcctctgatcaaggcaggagacataattgcaatttggatccactctcactttcattgcaagccttcagcactcccaacctgtaatccctccaacagttcggtggacattctttatgtagatcagaagcttgattattttgcacttggtttcactaaacactctatgaaatccaatttgagttcctgcaaagaagcctgccttggtgactattcttgccttgttctattcttcgaaaacaatactggaaatgggagaatgcacatctatgttatagtggtcattttgaacgtaacaattttggtgttagttggccaagtttcttttggcttcttgtactacctcaagaagaagagattactggactactctgaagaaatcatgggagaggatgattttgtggacagtcttcccggaatgcctattcgtttcagttacagcactcttagcacaacaactacaaatttctccacagcaagtcaggagacatgtggtgttattgaagcattttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

739

Amino Acids

83.09

Weight (kDa)

4.89

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1048
AccBSI CCGCTC 1 cut(s) 865
AccI GTMKAC 1 cut(s) 351
AccII CGCG 1 cut(s) 158
AccIII TCCGGA 1 cut(s) 988
AciI CCGC 5 cut(s) 28, 551, 865, 974, 1469
AclWI GGATC 5 cut(s) 336, 947, 1091, 1741, 1754
AcoI YGGCCR 1 cut(s) 2020
AcsI RAATTY 6 cut(s) 8, 437, 606, 695, 1017, 2170
AcuI CTGAAG 4 cut(s) 353, 990, 1758, 2100
AfaI GTAC 4 cut(s) 853, 1247, 1298, 2045
AfiI CCNNNNNNNGG 2 cut(s) 325, 1242
AflIII ACRYGT 1 cut(s) 2195
AjnI CCWGG 1 cut(s) 345
AjuI GAANNNNNNNTTGG 4 cut(s) 416, 448, 1893, 1925
AleI CACNNNNGTG 1 cut(s) 1413
AluBI AGCT 6 cut(s) 22, 449, 598, 647, 767, 1837
AluI AGCT 6 cut(s) 22, 449, 598, 647, 767, 1837
Alw21I GWGCWC 1 cut(s) 1410
Alw26I GTCTC 3 cut(s) 731, 1722, 2186
Alw44I GTGCAC 1 cut(s) 1406
AlwI GGATC 5 cut(s) 336, 947, 1091, 1741, 1754
AlwNI CAGNNNCTG 2 cut(s) 179, 368
Aor13HI TCCGGA 1 cut(s) 988
AoxI GGCC 6 cut(s) 58, 118, 186, 343, 1233, 2020
ApaLI GTGCAC 1 cut(s) 1406
ApeKI GCWGC 1 cut(s) 410
ApoI RAATTY 6 cut(s) 8, 437, 606, 695, 1017, 2170
AspS9I GGNCC 3 cut(s) 119, 187, 1323
AsuC2I CCSGG 1 cut(s) 2121
AsuHPI GGTGA 3 cut(s) 1142, 1541, 1925
AsuII TTCGAA 3 cut(s) 41, 677, 1941
AvaII GGWCC 1 cut(s) 1323
BaeGI GKGCMC 1 cut(s) 1410
BalI TGGCCA 1 cut(s) 2022
BamHI GGATCC 1 cut(s) 1746
BanI GGYRCC 1 cut(s) 1048
BbsI GAAGAC 4 cut(s) 537, 1076, 1333, 2108
Bbv12I GWGCWC 1 cut(s) 1410
BbvI GCAGC 1 cut(s) 422
BccI CCATC 6 cut(s) 103, 209, 635, 791, 986, 995
BceAI ACGGC 1 cut(s) 41
BciT130I CCWGG 1 cut(s) 347
BclI TGATCA 1 cut(s) 1716
BcnI CCSGG 1 cut(s) 2121
BcoDI GTCTC 3 cut(s) 731, 1722, 2186
BfmI CTRYAG 1 cut(s) 1011
BisI GCNGC 3 cut(s) 411, 866, 1470
BlsI GCNGC 3 cut(s) 412, 867, 1471
Bme1390I CCNGG 2 cut(s) 347, 2121
Bme18I GGWCC 1 cut(s) 1323
BmgT120I GGNCC 3 cut(s) 119, 187, 1323
BmiI GGNNCC 2 cut(s) 1050, 1748
BmrFI CCNGG 2 cut(s) 347, 2121
BmsI GCATC 2 cut(s) 1174, 1293
BoxI GACNNNNGTC 1 cut(s) 537
BpiI GAAGAC 4 cut(s) 537, 1076, 1333, 2108
BplI GAGNNNNNCTC 2 cut(s) 268, 300
Bpu10I CCTNAGC 1 cut(s) 567
Bpu14I TTCGAA 3 cut(s) 41, 677, 1941
BpuEI CTTGAG 2 cut(s) 1592, 2036
BpuMI CCSGG 1 cut(s) 2121
BsaJI CCNNGG 4 cut(s) 378, 750, 1282, 1909
BsaWI WCCGGW 1 cut(s) 988
Bsc4I CCNNNNNNNGG 2 cut(s) 325, 1242
Bse1I ACTGG 6 cut(s) 184, 319, 1304, 1516, 1957, 2073
Bse3DI GCAATG 1 cut(s) 1762
BseAI TCCGGA 1 cut(s) 988
BseBI CCWGG 1 cut(s) 347
BseDI CCNNGG 4 cut(s) 378, 750, 1282, 1909
BseGI GGATG 8 cut(s) 374, 391, 634, 728, 746, 997, 1308, 2104
BseLI CCNNNNNNNGG 2 cut(s) 325, 1242
BseMI GCAATG 1 cut(s) 1762
BseMII CTCAG 5 cut(s) 375, 800, 905, 1125, 1660
BseNI ACTGG 6 cut(s) 184, 319, 1304, 1516, 1957, 2073
BseRI GAGGAG 1 cut(s) 32
BseSI GKGCMC 1 cut(s) 1410
BseXI GCAGC 1 cut(s) 422
Bsh1236I CGCG 1 cut(s) 158
BshFI GGCC 6 cut(s) 60, 120, 188, 345, 1235, 2022
BshNI GGYRCC 1 cut(s) 1048
BsiHKAI GWGCWC 1 cut(s) 1410
BsiSI CCGG 2 cut(s) 989, 2121
BslFI GGGAC 2 cut(s) 1148, 1241
BslI CCNNNNNNNGG 2 cut(s) 325, 1242
BsmAI GTCTC 3 cut(s) 731, 1722, 2186
BsmFI GGGAC 2 cut(s) 1148, 1241
BsmI GAATGC 2 cut(s) 1971, 2130
BsnI GGCC 6 cut(s) 60, 120, 188, 345, 1235, 2022
Bsp119I TTCGAA 3 cut(s) 41, 677, 1941
Bsp1286I GDGCHC 1 cut(s) 1410
Bsp13I TCCGGA 1 cut(s) 988
Bsp143I GATC 7 cut(s) 328, 952, 1096, 1213, 1716, 1746, 1828
BspACI CCGC 5 cut(s) 28, 551, 865, 974, 1469
BspANI GGCC 6 cut(s) 60, 120, 188, 345, 1235, 2022
BspCNI CTCAG 5 cut(s) 374, 801, 904, 1124, 1659
BspEI TCCGGA 1 cut(s) 988
BspFNI CGCG 1 cut(s) 158
BspHI TCATGA 2 cut(s) 480, 1087
BspLI GGNNCC 2 cut(s) 1050, 1748
BspPI GGATC 5 cut(s) 336, 947, 1091, 1741, 1754
BspT104I TTCGAA 3 cut(s) 41, 677, 1941
BspT107I GGYRCC 1 cut(s) 1048
BsrBI CCGCTC 1 cut(s) 865
BsrDI GCAATG 1 cut(s) 1762
BsrI ACTGG 6 cut(s) 184, 319, 1304, 1516, 1957, 2073
BssECI CCNNGG 4 cut(s) 378, 750, 1282, 1909
BssMI GATC 7 cut(s) 328, 952, 1096, 1213, 1716, 1746, 1828
BssT1I CCWWGG 4 cut(s) 378, 750, 1282, 1909
Bst2UI CCWGG 1 cut(s) 347
Bst4CI ACNGT 6 cut(s) 134, 257, 928, 1327, 1805, 2114
Bst6I CTCTTC 2 cut(s) 1353, 2054
BstBI TTCGAA 3 cut(s) 41, 677, 1941
BstC8I GCNNGC 4 cut(s) 207, 316, 1769, 1906
BstDEI CTNAG 8 cut(s) 361, 567, 741, 809, 891, 1111, 1646, 2153
BstF5I GGATG 8 cut(s) 374, 391, 634, 728, 746, 997, 1308, 2104
BstFNI CGCG 1 cut(s) 158
BstKTI GATC 7 cut(s) 331, 955, 1099, 1216, 1719, 1749, 1831
BstMAI GTCTC 3 cut(s) 731, 1722, 2186
BstMBI GATC 7 cut(s) 328, 952, 1096, 1213, 1716, 1746, 1828
BstMWI GCNNNNNNNGC 3 cut(s) 126, 595, 2154
BstNI CCWGG 1 cut(s) 347
BstNSI RCATGY 1 cut(s) 2199
BstPAI GACNNNNGTC 1 cut(s) 537
BstSCI CCNGG 2 cut(s) 345, 2119
BstSFI CTRYAG 1 cut(s) 1011
BstSLI GKGCMC 1 cut(s) 1410
BstUI CGCG 1 cut(s) 158
BstV1I GCAGC 1 cut(s) 422
BstV2I GAAGAC 4 cut(s) 537, 1076, 1333, 2108
BstX2I RGATCY 3 cut(s) 328, 952, 1746
BstYI RGATCY 3 cut(s) 328, 952, 1746
BsuRI GGCC 6 cut(s) 60, 120, 188, 345, 1235, 2022
BtsCI GGATG 8 cut(s) 374, 391, 634, 728, 746, 997, 1308, 2104
BtsI GCAGTG 2 cut(s) 1147, 1713
BtsIMutI CAGTG 6 cut(s) 262, 966, 1147, 1210, 1654, 1713
Cac8I GCNNGC 4 cut(s) 207, 316, 1769, 1906
CaiI CAGNNNCTG 2 cut(s) 179, 368
CciI TCATGA 2 cut(s) 480, 1087
Cfr13I GGNCC 3 cut(s) 119, 187, 1323
CseI GACGC 2 cut(s) 164, 388
Csp6I GTAC 4 cut(s) 852, 1246, 1297, 2044
CspCI CAANNNNNGTGG 2 cut(s) 165, 200
CviAII CATG 9 cut(s) 107, 481, 625, 1088, 1120, 1337, 1495, 2089, 2196
CviQI GTAC 4 cut(s) 852, 1246, 1297, 2044
DdeI CTNAG 8 cut(s) 361, 567, 741, 809, 891, 1111, 1646, 2153
DpnI GATC 7 cut(s) 330, 954, 1098, 1215, 1718, 1748, 1830
DpnII GATC 7 cut(s) 328, 952, 1096, 1213, 1716, 1746, 1828
EaeI YGGCCR 1 cut(s) 2020
Eam1104I CTCTTC 2 cut(s) 1353, 2054
EarI CTCTTC 2 cut(s) 1353, 2054
Eco130I CCWWGG 4 cut(s) 378, 750, 1282, 1909
Eco147I AGGCCT 1 cut(s) 345
Eco47I GGWCC 1 cut(s) 1323
Eco57I CTGAAG 4 cut(s) 353, 990, 1758, 2100
EcoRI GAATTC 2 cut(s) 8, 437
EcoRII CCWGG 1 cut(s) 345
EcoT14I CCWWGG 4 cut(s) 378, 750, 1282, 1909
ErhI CCWWGG 4 cut(s) 378, 750, 1282, 1909
FaeI CATG 9 cut(s) 110, 484, 628, 1091, 1123, 1340, 1498, 2092, 2199
FalI AAGNNNNNCTT 4 cut(s) 416, 448, 1893, 1925
FaqI GGGAC 2 cut(s) 1148, 1241
FatI CATG 9 cut(s) 106, 480, 624, 1087, 1119, 1336, 1494, 2088, 2195
FbaI TGATCA 1 cut(s) 1716
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 3 cut(s) 411, 866, 1470
FokI GGATG 8 cut(s) 361, 398, 641, 715, 733, 1004, 1315, 2111
Fsp4HI GCNGC 3 cut(s) 411, 866, 1470
GluI GCNGC 3 cut(s) 411, 866, 1470
HaeIII GGCC 6 cut(s) 60, 120, 188, 345, 1235, 2022
HapII CCGG 2 cut(s) 989, 2121
HgaI GACGC 2 cut(s) 164, 388
Hin1II CATG 9 cut(s) 110, 484, 628, 1091, 1123, 1340, 1498, 2092, 2199
HincII GTYRAC 2 cut(s) 102, 931
HindII GTYRAC 2 cut(s) 102, 931
HindIII AAGCTT 1 cut(s) 1835
HpaI GTTAAC 1 cut(s) 931
HpaII CCGG 2 cut(s) 989, 2121
HphI GGTGA 3 cut(s) 1142, 1541, 1925
Hpy166II GTNNAC 7 cut(s) 102, 352, 622, 931, 1408, 1813, 2110
Hpy8I GTNNAC 7 cut(s) 102, 352, 622, 931, 1408, 1813, 2110
Hpy99I CGWCG 2 cut(s) 251, 404
HpyAV CCTTC 3 cut(s) 798, 966, 1782
HpyCH4III ACNGT 6 cut(s) 134, 257, 928, 1327, 1805, 2114
HpyCH4IV ACGT 2 cut(s) 1251, 1998
HpyF10VI GCNNNNNNNGC 3 cut(s) 126, 595, 2154
HpyF3I CTNAG 8 cut(s) 361, 567, 741, 809, 891, 1111, 1646, 2153
HpySE526I ACGT 2 cut(s) 1251, 1998
Hsp92II CATG 9 cut(s) 110, 484, 628, 1091, 1123, 1340, 1498, 2092, 2199
Kpn2I TCCGGA 1 cut(s) 988
Ksp22I TGATCA 1 cut(s) 1716
KspAI GTTAAC 1 cut(s) 931
Kzo9I GATC 7 cut(s) 328, 952, 1096, 1213, 1716, 1746, 1828
LmnI GCTCC 4 cut(s) 19, 289, 644, 862
Lsp1109I GCAGC 1 cut(s) 422
LweI GCATC 2 cut(s) 1174, 1293
MaeII ACGT 2 cut(s) 1251, 1998
MaeIII GTNAC 4 cut(s) 257, 1913, 1999, 2141
MalI GATC 7 cut(s) 330, 954, 1098, 1215, 1718, 1748, 1830
MbiI CCGCTC 1 cut(s) 865
MboI GATC 7 cut(s) 328, 952, 1096, 1213, 1716, 1746, 1828
MfeI CAATTG 1 cut(s) 945
MflI RGATCY 3 cut(s) 328, 952, 1746
MhlI GDGCHC 1 cut(s) 1410
MlsI TGGCCA 1 cut(s) 2022
MluNI TGGCCA 1 cut(s) 2022
MlyI GAGTC 2 cut(s) 254, 527
MmeI TCCRAC 3 cut(s) 840, 1124, 1824
Mox20I TGGCCA 1 cut(s) 2022
MroI TCCGGA 1 cut(s) 988
MscI TGGCCA 1 cut(s) 2022
MseI TTAA 8 cut(s) 32, 582, 699, 930, 1023, 1079, 1179, 1376
MslI CAYNNNNRTG 6 cut(s) 627, 1092, 1262, 1413, 1667, 1974
Msp20I TGGCCA 1 cut(s) 2022
MspI CCGG 2 cut(s) 989, 2121
MspR9I CCNGG 2 cut(s) 347, 2121
MunI CAATTG 1 cut(s) 945
Mva1269I GAATGC 2 cut(s) 1971, 2130
MvaI CCWGG 1 cut(s) 347
MvnI CGCG 1 cut(s) 158
MwoI GCNNNNNNNGC 3 cut(s) 126, 595, 2154
NciI CCSGG 1 cut(s) 2121
NdeII GATC 7 cut(s) 328, 952, 1096, 1213, 1716, 1746, 1828
NlaIII CATG 9 cut(s) 110, 484, 628, 1091, 1123, 1340, 1498, 2092, 2199
NlaIV GGNNCC 2 cut(s) 1050, 1748
NmuCI GTSAC 2 cut(s) 257, 1913
NspI RCATGY 1 cut(s) 2199
NspV TTCGAA 3 cut(s) 41, 677, 1941
OliI CACNNNNGTG 1 cut(s) 1413
PagI TCATGA 2 cut(s) 480, 1087
PceI AGGCCT 1 cut(s) 345
PciI ACATGT 1 cut(s) 2195
PcsI WCGNNNNNNNCGW 2 cut(s) 246, 396
PctI GAATGC 2 cut(s) 1971, 2130
PflFI GACNNNGTC 1 cut(s) 398
PfoI TCCNGGA 1 cut(s) 2119
PkrI GCNGC 3 cut(s) 412, 867, 1471
PleI GAGTC 2 cut(s) 254, 527
PpsI GAGTC 2 cut(s) 254, 527
PscI ACATGT 1 cut(s) 2195
PshAI GACNNNNGTC 1 cut(s) 537
Psp6I CCWGG 1 cut(s) 345
PspGI CCWGG 1 cut(s) 345
PspN4I GGNNCC 2 cut(s) 1050, 1748
PspPI GGNCC 3 cut(s) 119, 187, 1323
PstNI CAGNNNCTG 2 cut(s) 179, 368
PsuI RGATCY 3 cut(s) 328, 952, 1746
PsyI GACNNNGTC 1 cut(s) 398
RsaI GTAC 4 cut(s) 853, 1247, 1298, 2045
RsaNI GTAC 4 cut(s) 852, 1246, 1297, 2044
RseI CAYNNNNRTG 6 cut(s) 627, 1092, 1262, 1413, 1667, 1974
SaqAI TTAA 8 cut(s) 32, 582, 699, 930, 1023, 1079, 1179, 1376
SatI GCNGC 3 cut(s) 411, 866, 1470
Sau3AI GATC 7 cut(s) 328, 952, 1096, 1213, 1716, 1746, 1828
Sau96I GGNCC 3 cut(s) 119, 187, 1323
SchI GAGTC 2 cut(s) 254, 527
ScrFI CCNGG 2 cut(s) 347, 2121
SduI GDGCHC 1 cut(s) 1410
SfaNI GCATC 2 cut(s) 1174, 1293
SfcI CTRYAG 1 cut(s) 1011
SfuI TTCGAA 3 cut(s) 41, 677, 1941
SinI GGWCC 1 cut(s) 1323
SmiMI CAYNNNNRTG 6 cut(s) 627, 1092, 1262, 1413, 1667, 1974
SmlI CTYRAG 2 cut(s) 1571, 2051
SmoI CTYRAG 2 cut(s) 1571, 2051
SseBI AGGCCT 1 cut(s) 345
SsiI CCGC 5 cut(s) 28, 551, 865, 974, 1469
StuI AGGCCT 1 cut(s) 345
StyD4I CCNGG 2 cut(s) 345, 2119
StyI CCWWGG 4 cut(s) 378, 750, 1282, 1909
TaaI ACNGT 6 cut(s) 134, 257, 928, 1327, 1805, 2114
TaiI ACGT 2 cut(s) 1254, 2001
TaqI TCGA 9 cut(s) 41, 240, 246, 677, 704, 711, 959, 1311, 1941
TatI WGTACW 1 cut(s) 2043
TauI GCSGC 2 cut(s) 868, 1472
Tru1I TTAA 8 cut(s) 32, 582, 699, 930, 1023, 1079, 1179, 1376
Tru9I TTAA 8 cut(s) 32, 582, 699, 930, 1023, 1079, 1179, 1376
TscAI CASTG 6 cut(s) 262, 973, 1147, 1210, 1654, 1713
TseFI GTSAC 2 cut(s) 257, 1913
TseI GCWGC 1 cut(s) 410
Tsp45I GTSAC 2 cut(s) 257, 1913
TspRI CASTG 6 cut(s) 262, 973, 1147, 1210, 1654, 1713
Tth111I GACNNNGTC 1 cut(s) 398
VneI GTGCAC 1 cut(s) 1406
VpaK11BI GGWCC 1 cut(s) 1323
XapI RAATTY 6 cut(s) 8, 437, 606, 695, 1017, 2170
XbaI TCTAGA 2 cut(s) 292, 469
XceI RCATGY 1 cut(s) 2199
XcmI CCANNNNNNNNNTGG 2 cut(s) 1807, 2030
XmiI GTMKAC 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.